ID:

dsi_918

 Coordinate:

3r:21859350-21859499 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGAGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGGTGGATCGGGATTACGAGAGACAGAGGCAGCATTATGGTAAAAATCCGGGGATTTAGATATATAAATATATATCCATATAAAACTCTGATATTAAGTAAATATTTTTCTTTCTTCCAGACAACTTGGATGGCGTTACGGAGCTCCGTTTGGAGCAGTACGAAATCCAC
**************************************************..(((((.((((((...((((...(((..((..((..(((......)))....))..))...)))..))))...))))))........(((((((....)))))))........)))))((((((.....))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
......................................................................AGCTATGATCCGGAGATT.................................................................................................................................................................. 18 3 20 4.85 97 78 2 0 0 0 0 14 0 3 0
..........................................................................................................................................................................................................AACTTGGATGGCGTTACGGAGCTC........................ 24 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTTGGATGGCGTTACGGAGCTC........................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................GCAGAGAAAGGGCAAAAGAGTACGGAT........................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................GACAGAGGCAGCATTATGT.................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................GGATGGCGTTACGGAGCTC........................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................GGTAAAATTCCGGGGA.................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
......................................................................AGCTATGATCCGGAGG.................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................AAATCCGGGGATGTAGCT............................................................................................................. 18 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................AACTTGGACGGCGTT................................. 15 1 7 0.29 2 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................AAAAATCCGGGGACGTAGCT............................................................................................................. 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCTCCGTTTAGAGTAGT........... 17 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................AAAATCCGGGGATGTAGCTC............................................................................................................ 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TAAGTATTTTTCTTTCTCCCG................................................... 21 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................CTTGCAGACGACTTGAATGG..................................... 20 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AACTTGGATGGCGCT................................. 15 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...................................................AAGACTACGGATTCTGA...................................................................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................TCGGCATTACGAGAGA................................................................................................................................................... 16 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................AAAGTCCGGGGATGTAGCT............................................................................................................. 19 3 14 0.07 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................AATCCGGGGATGTAGCT............................................................................................................. 17 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................TCGGCATTACGAGAG.................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................TCGGCATTGCGAGAGA................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..................GACTCCGGGTGGATCACT...................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..........................................................................ATGATCCGGTGGTTCT................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGACCGGAGGAGGTTAGCCTCAGGGTCACCTAGTGACGTCTCTTTCCCGTTTTCTCATGCCTAACACTGGTCGATACTAGGCCACCTAGCCCTAATGCTCTCTGTCTCCGTCGTAATACCATTTTTAGGCCCCTAAATCTATATATTTATATATAGGTATATTTTGAGACTATAATTCATTTATAAAAAGAAAGAAGGTCTGTTGAACCTACCGCAATGCCTCGAGGCAAACCTCGTCATGCTTTAGGTG
**************************************************..(((((.((((((...((((...(((..((..((..(((......)))....))..))...)))..))))...))))))........(((((((....)))))))........)))))((((((.....))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
............................................................................................................................................................................................AGAATGAAGGTCTGTTGA............................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAAAAAGAACGAAGGTCTGTTGT............................................ 23 3 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................................TAGGGCACCTAGCCCCACTG......................................................................................................................................................... 20 3 2 0.50 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................AAAAGAACGAAGGTCTGTTGT............................................ 21 2 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................AAAGAACGAAGGTCTGTTGT............................................ 20 2 5 0.20 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................AAAGAAGGTCTGTAGA............................................ 16 1 7 0.14 1 1 0 0 0 0 0 0 0
..............................................................................AGTCCACCTAGCCCGAATGG........................................................................................................................................................ 20 3 8 0.13 1 0 0 0 1 0 0 0 0
...........................................................CCTGACACTGGGCGATACC............................................................................................................................................................................ 19 3 11 0.09 1 0 0 1 0 0 0 0 0
.....................................................................GTCGGTATTAGGCCGCCTA.................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0
....................................................................................................TCTATCTCAGTCGTAA...................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0
....................................................................GGTCTATACTTGGCCACT.................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................TAGTTTGAGAGTATAATAC........................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:21859300-21859549 + dsi_918 ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGAGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGGTGGATCGGGATTACGAGA---GACAG---AG---GCAGCATTATGGTAAA-AATCCGGGG------AT-T--T-----AGATA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA-----------------TCCATATAAAACT--------------------------C----------------------TGATA-TTAAGTA------AATATTT-TTC--TTT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTCCGTTTGGAGCAGTACGAAATCCAC
droSec2 scaffold_13:1174516-1174765 + ACTGGCCTCCTCAAATCGGAGTCCCAGTGGATCACTGCAGAGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGGTGGATCGGGATTACGAGA---GACAG---AG---GCAGCATTATGGTAAA-AATTCGGGG------AC-T--T-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-----------------TCCGCATAAATCT--------------------------C----------------------TGATA-TTAAGTA------AATATTT-TTC--TTT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTCCGTTTGGAGCAGTACGAAATCCAC
dm3 chr3R:22399374-22399625 + ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGATTGATCGGGATTACGAAA---GGCAG---AG---GCAGCATTATGGTAAA-AATCCGGGG------AT-T--T-----AGAAA-------------TATTAAA-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA-----------------TCCACAAAAAACT--------------------------C----------------------TGATA-TTAAGCA------AATATTT-TTC--ATT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCAC
droEre2 scaffold_4820:5656189-5656439 - ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGAGTACGGATAGTGACCAGCTACGATCCGGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCATTATGGTAAC-AGCTCGGGG------AT-T--A-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCCTT-------------TATCTTGA-------------------------------T----------------------TGATA-TTAAATACAA---ATTTA-T-ATC--TTT-TTTCCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCAC
droYak3 3R:24101181-24101442 - ACTGGCCTCCTCCAACCGGAGTCCCAGTGGATCACTGCAGCGCAAGGGCAAGAGAGTACGGATAGTGACCAGCTATGATCCGGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCTTTATGGTAAA-AGTTCGGGG------AT-T--A-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-----------------ACCTCTGATAACT--------TGATAACTCGG-------T----------------------TGATA-TTAAATA------AATCAAT-CTC--TTTGTTTACAGATAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCAC
droEug1 scf7180000409682:194973-195219 - ACTGGCCTCCTCGAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGGGTTCGGATAGTGACCAGTTATGATCCAGTAGATCGGGATTACGAAA---GGCAA---AG---ACAGCAATATGGTAAA-AATTCAGGA------AT-A--A-----AGAAT-----------------AAT-AT---------------------------------------------------------------------------------------------------------------------------------------------------A-----TGTCATTT---------------------------------AA--------------------------TAATA----------------------AGATA-TTAATCA--GTT----TATT-TTCATTAT-CTTGCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAACAGTACGAAATCCAC
droBia1 scf7180000302113:2636104-2636351 + CCTGGCCTCCTCCAACCGGAGTCCCAGTGGCTCGCTGCAGCGCAAGGGCAAGCGGGTGCGGATTGTGACCAGCTACGATCCGGTGGATCGGGACTACGAGA---GGCAG---AG---GCAGCACTATGGTAAC-CTAA--------------T--T-----AGAAACAATTCT----------AAT-------------------------------------------------------------------------------------------------------------------------------------------AGTAG---------------------------------C--------------CC---------CCC--TT--------------ATAAAC----------------------AGATATTTAATCA--GTT----TACT--TCTTACT-TTTCCAGACAACCTGGATGGCGTCACGGAGCTGCGCTTGGAGCAGTACGAAATCCAC
droTak1 scf7180000415286:406139-406503 + ACTGGCCTCCTCCAATCGCAGTCCCAGTGGTTCACTGCAGCGAAAGGGCAAGAGAGTAAGGATAGTGACCAGCTACGATCCGGTGGATCGGGATTACGAGA---GGCAG---AG---GCAGCATTATGGTAAA-AATTGGGA--------ATA--G-------------------TCACATGTAATATTCTTTAAATAAATAAATAAATCAAAAAAATAAATAAAAAAATAAATACAAAAATAAATAAACAAATTAATAAATAAATAGAAAAATAAATAAATAAATAAATAATAAAAAAAAAAATAAAATATATAATAATATATT---------TAATAAA-------------A--------T--------------CT---------CC----------------------------------------------------------------------CTC-TTC--TTC-TTTGTAGACAATCTGGATGGCGTCACGGAGCTTCGCTTGGAGCAGTACGAAATCCAC
droEle1 scf7180000491280:418752-419004 + ACTGGCCTCCTCGAACAGGAGTCCCAGTGGATCGCTGCAGCGAAAGGGCAAAAGAGTACGCATAGTGACCAGCTATGATCCAGTGGATCGCGATTACGAAA---GGCAG---AG---GCAGCACTATGGTAAC-ATTTTGCGA------AA-T--G-----TGTAG-------------ATTTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTT-----------------TCCTCTAAA--------------------------TAACC----------------------AGATTATTAATGA--GTT-AATCTTT-TTC--A-T-ATTTCAGACAACTTGGATGGCGTTACGGAACTGCGTTTGGAGCAGTACGAAATCCAC
droRho1 scf7180000778271:62653-62914 + ACTGGCCTCCTCCAATCGTAGTCCCAGTGGATCCTTGCAGCGAAAGGGCAAAAGAGTACGCATAGTGACCAGCTATGATCCGGTCGATCGGGATTACGAAA---GACAG---AG---ACAGCATTATGGTAAC-ATTTTGGGA------AATA--A-----ACAAA-----------------AAT-AC---------------------------------------------------------------------------------------------------------------------------------------------------A-----TAG--------C-GATTT---T--------------CT---------CCCCTAAATCAAAACCAGTTAGTAATT----------------------AGATA-T---------------TAATCTTC--ATT-TTTGCAGACAACTTGGATGGGGTAACGGAGCTGCGTGTGGAGCAGTATGAAATACAC
droFic1 scf7180000454055:2290517-2290781 + CCTGGCCTCCTCCAACCGGAGTCCCAGTGGATCCCTGCAGCGAAAGGGAAAGAGAGTACGCATAGTAACCAGCTATGATCCCGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCAATATGGTAAC-ATATAGGAA------AC----G-------AAA-------------CAT-ACT-AT-------------------------------------------------------------------------------------------------------------------------------------------------A-T-----TTG--------A-GATAT---TCATTATTTATTC--CTTATAAACAT--------------------------G----------------------TAACT-TATGGTA------TTCTTTT-CTA--TTT-TTTCCAGACAACTTGGATGGCGTCACGGAGCTGCGTTTGGAGCAGTACGAAATCCAC
droKik1 scf7180000302253:304313-304558 - GCTGGCCTCCTCCAACCGGAGTCCCAGTGGCTCCCTGCAGCGCAAGGGCAAAAGAGTGCGCATAGTAACCAGCTACGATCCGGTGGATCGGGATTATGAGA---GGCAG---AG---GCAGCATTATGGTAAA-GGGCAGAG-------AA-------------AA-------------CATACAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAATCTCTTTC-------------------------------AGGAA----------------------------TC----------------------CCATT-TTAAATATAATT----TACTCTTT--CTT-TTTCCAGATAATTTAGATGGCGTCACGGAACTCCGCTTGGAGCAGTACGAAATCCAC
droAna3 scaffold_13340:16942943-16943181 - CCTGGCCTCCTCCAATCGGAGCCCGAGTGGCTCGCTGCAGCGAAAGGGCAAGCGGGTGCGCATTGTGACCAGCTACGATCCTGTGGATCGGGACTACGAAA---GACAA---CG---ACAGCACTATGGTAGA-ATTATAAAGACAGAGAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCT-------------TCCCCAGAAAGTT--------------------------C----------------------AC------AAATA------ATGTACA-CCT--TCT-CTTTCAGACAACCTGGACGGCGTCACGGAGCTGCGTTTGGAGCAGTATGAGATCCAT
droBip1 scf7180000396424:456506-456741 - GCTGGCTTCCTCCAATCGCAGCCCGAGTGGCTCGCTGCAGCGGAAGGGCAAGCGGGTCCGCATTGTGACCAGCTACGATCCCGTGGATCGGGACTACGAAA---GACAGCAAAG---ACAGCACTATGGTAGA-CAGACAGAG------AGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCT-------------ACCCGAGA-------------------------------G----------------------AGTTC-CCGAATA------ACTCCCA-TCT--TCC-ATTGCAGATAACCTGGACGGCGTCACGGAGCTTCGCTTGGAGCAGTACGAGATCCAC
dp5 2:10408954-10409202 + TTTGGCCTCCTCGAACCGCAGTCCCATGGGCTCCCTTCAGAGGAAGGGCAAACGTGTGCGCATCGTCACCAGCTATGATCCCGTGGATAGGGATTACGCGGAAAGGCAG---CG---ACAGCACTACGGTAGA-CAGCGAGCG--AGAGATCATCCTCACCAGAAGCAC-------------------CATTTAAA---------------------------------------------------------------------------------------------------------------------------------CGTTG---------------------------------T--------------CT---------CCC--------------------------------------------------------------TT----TGTCCCTT--CTA-TTTGCAGATAACTTGGATGGCGTCACGGAGCTGCGTTTGGAGCAGTACGAGATCCAC
droWil2 scf2_1100000004943:6804475-6804721 - CCTAGCCTCATCAAATCGTAGTCCAGCAGGATCGTTACGTCGCAAAGACAAACGCGTACGAATTGTGACTAGCTATGAACCGCTGGAAAGGGATTACGATC---GCCAG---AG---ACAGCATTTTGGTAAC-CACTTGCAT------TGCA--G-------GAT------TAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTCT-----GAAA--------------------------------TTCAAG--------------------------CAA------------------------CTGTA-TTA---A--ATT----AAAT-TTT--TAC-TTTGCAGATAACTTGGATGGCGTGACAGAACTACGACAAGAGCAATATGAAATTCAT
droVir3 scaffold_12822:3547109-3547346 - dvi_2730 TTTGGCATCCTCGAATG---------GCGGCTCGTTGCGGCGCAAGGGCAAGCATGTGCGCATCGTGACCAGCTACGATCCCTTGGAACGCGACTACGAGC---GAAAC---AG---ACAGCAGTTTGGTAAA-CATTTGTGC------AGCA--G-------------------TCG--------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCTCT-----GAAATCTCTGAGTAT--------------------------------------------------------------------------------AGCTG-CTAATCC--GGT----TCTTCATT--TCA-TTTGCAGATAACATTGATGGCGTGACGGAGCTGCGTCTGGAGCAGTACGAGATACAC
droMoj3 scaffold_6540:16851242-16851475 - CCTGGCCTCCTCGAATG---------GCGGCTCGTTGCGGCGCAAAGGCAAGCACGTGCGCATCGTGACCAGCTACGATCCCCTAGAGCGGGACTATGAGC---GAAAC---AG---GCAGCAGTTCGGTAAA-CACTTGTGG------AGTA--G-------------------TTG--------------------------------------------------------------------------------------------------------------------------------------------------------AGGATACGAAC-------------ATCT-----------------------CGA-A-----------------------------T----------------------GCATA-CTGAATA------ATTTATT-CTC--TCT-CTTGCAGATAACATTGATGGCGTGACGGAGCTGCGCCTGGAGCAGTACGAGATACAC
droGri2 scaffold_14906:1162593-1162863 - GTTGGCCTCCTCGAATG---------GTGGCTCGCTGCGCCGCAAGGGCAAACACGTGCGAATCGTGACCAGCTACGATCCCGTGGAGCGGGACTACGATC---GACTACACAGACAGCAGCAGTTTGGTAAAACATTTGCGT------TGCA--G-------TTA------A------AGTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------C--------------AC---------TTG--AT--------------ATAATTAGGCAAACGTCTGAAGCAACTCGGCAA-CTAATCA--ATTTGATCTTT-ATC--GTACCCCATAGATAACGTTGATGGTGTGACGGAGCTGCGTGTGGAACAGTATGAGATACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGAGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGGTGGATCGGGATTACGAGA---GACAG---AG---GCAGCATTATGGTAAA-AATCCGGGG------AT-T--T-----AGATA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA-----------------TCCATATAAAACT--------------------------C----------------------TGATA-TTAAGTA------AATATTT-TTC--TTT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTCCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTTACGGAGCTC........................2413.00301200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGATGGCGTTACGGAGCTC........................2211.00100100000000000000
....................................GCAGAGAAAGGGCAAAAGAGTACGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
........................................................................................................GACAG---AG---GCAGCATTATGT..................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGGCGTTACGGAGCTC........................1911.00100000000000001000
droSec2
ACTGGCCTCCTCAAATCGGAGTCCCAGTGGATCACTGCAGAGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGGTGGATCGGGATTACGAGA---GACAG---AG---GCAGCATTATGGTAAA-AATTCGGGG------AC-T--T-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-----------------TCCGCATAAATCT--------------------------C----------------------TGATA-TTAAGTA------AATATTT-TTC--TTT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTCCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGATGGCGTTACGGAGCT.........................2412.0021010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTTACGGAGCTC........................2411.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTCCGTTTGGAGCAGT...........2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCGTTACGGA............................1911.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTTACGGAGC..........................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGACAACTTGGATGGCGTT.................................2111.0010001
dm3
ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGAGTACGGATTGTGACCAGCTATGATCCGATTGATCGGGATTACGAAA---GGCAG---AG---GCAGCATTATGGTAAA-AATCCGGGG------AT-T--T-----AGAAA-------------TATTAAA-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA-----------------TCCACAAAAAACT--------------------------C----------------------TGATA-TTAAGCA------AATATTT-TTC--ATT-CTTCCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................ACTGCAGCGAAAGGGCAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGACAACTTGGATGGCGTTACGGA............................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTTGGATGGCGTTACGGA............................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGTTACGGAGCTGCGTTTGGAGC..............2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTACGGAGCTGCGTTTGGAGCA.............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGA................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGATGGCGTTACGGAGCTGC.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGATGGCGTTACGGAGCTGCGT.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTTACGGAGCTGC.......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAGCAGTACGA.......2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAGCTGCGT.....................2412.0020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAGCA.............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAGCAGT...........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................ACGGATTGTGACCAGCTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCAGCGAAAGGGCAAAAGAGTACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AGCTATGATCCGATTGATCGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAGCTGCGTT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGGATCACTGCAGCGAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAGCAGTA..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAGCTG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................AGGGCAAAAGAGTACGGATTGTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AGCTATGATCCGATTGATCGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTACGGAGCTGCGTTTGGAGCA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAG...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..........TCCAATCGGAGTCCCAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTTACGGAGCTGCGTTTGGA................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GAGTACGGATTGTGACCAGCTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAGCTGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTTGGATGGCGTTACGGAGC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAGCA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTTACGGAGCTGCGTTTG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTTGGATGGCGTTACGGAGCTGC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................CCCAGTGGATCACTGCAGCGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTTGGAGCAGTACGAAATC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACAACTTGGATGGCGTTAC...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................GTACGGATTGTGACCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................GATTACGAAA---GGCAG---AG---GC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCAGTGGATCACTGCAGCGAAAGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGTTACGGAGCTGCGT.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAGCAGTAC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTACGGAGCTGCGTTTG..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCAATCGGAGTCCCAGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCGTTACGGAGCTGCG......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGCTGCGTTTGGAGC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAGC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTACGGAGCTGCGT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTGGAGCAGTACGA.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................TGACCAGCTATGATCCGATTGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCTGCGTTTGGAGCAGTA..........2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAGCAGTACGAAATC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGGCGTTACGGAG...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GATCACTGCAGCGAAAGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGATGGCGTTACGGAGC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAGCAGT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTTGGATGGCGTTACGGAGC..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................ATTGATCGGGATTACGAAA---GGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGATGGCGTTACGGA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGTTACGGAGCTGCGTTTGG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GATCCGATTGATCGGGATTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGATGGCGTTACGGAGCTGCGTT....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................TTACGAAA---GGCAG---AG---GCAGCATT......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTTGGATGGCGTTACGGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTACGGAGCTGCGTTTGG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TTACGAAA---GGCAG---AG---GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
ACTGGCCTCCTCCAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGAGTACGGATAGTGACCAGCTACGATCCGGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCATTATGGTAAC-AGCTCGGGG------AT-T--A-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCCTT-------------TATCTTGA-------------------------------T----------------------TGATA-TTAAATACAA---ATTTA-T-ATC--TTT-TTTCCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................GATCGGGATTACGAAA---GGCAG---AG---GCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2913.0030000003
..........................GTGGATCACTGCAGCGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
......CTCCTCCAATCGGAGTCCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTTACGGAGCTGC.......................1911.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACTTGGATGGCGTTACGGAGCTGC.......................2811.0010000100
..............................................................................................TACGAAA---GGCAG---AG---GCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGAGCTGCGTTTGGAGC..............2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGGCGTTACGGAGC..........................1811.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAGC..............2111.0010000010
....................GTCCCAGTGGATCACTGCAGCGAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...............................................................................CCGGTGGATCGGGATTACGAAA---GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGACAACTTGGATGGC....................................1811.0010100000
............................GGATCACTGCAGCGAAAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
............................................................................................ATTACGAAA---GGCAG---AG---GC............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTGGAGCAGTACGAA......1911.0011000000
............................................................................................ATTACGAAA---GGCAG---AG---GCAGCATTAT....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCGTTACGGAGCTGC.......................2411.0010000010
.........................................GAAAGGGCAAAAGAGTACGGATAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAGCAGTACGAAATC...2011.0010000010
droYak3
ACTGGCCTCCTCCAACCGGAGTCCCAGTGGATCACTGCAGCGCAAGGGCAAGAGAGTACGGATAGTGACCAGCTATGATCCGGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCTTTATGGTAAA-AGTTCGGGG------AT-T--A-----AGAAA-------------TATAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-----------------ACCTCTGATAACT--------TGATAACTCGG-------T----------------------TGATA-TTAAATA------AATCAAT-CTC--TTTGTTTACAGATAACTTGGATGGCGTTACGGAGCTGCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........CCTCCAACCGGAGTCCCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
....................................................AGAGTACGGATAGTGACCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.....................................................................CAGCTATGATCCGGTGGATCGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..................................................................GACCAGCTATGATCCGGTGGATCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..........................GTGGATCACTGCAGCGCAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
............................GGATCACTGCAGCGCAAGGGCAAGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..........................GTGGATCACTGCAGCGCAAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGAGCTGCGTTTGGAGC..............2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATAACTTGGATGGCGT..................................1911.00110000000000
.........................................................................TATGATCCGGTGGATCGGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
...................................................................ACCAGCTATGATCCGGTGGATCGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................CAGCTATGATCCGGTGGATCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCGTTACGGA............................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGAGCTGCGTTTGGAGC..............2211.00101000000000
...........................................................................................GATTACGAAA---GGCAG---AG---GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTTGGATGGCGTTACGGAGCTGC.......................2711.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGTTACGGAGCTGCGTTTGGAGCA.............2811.00100000010000
...............................................................................................ACGAAA---GGCAG---AG---GCAGCTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
ACTGGCCTCCTCGAATCGGAGTCCCAGTGGATCACTGCAGCGAAAGGGCAAAAGGGTTCGGATAGTGACCAGTTATGATCCAGTAGATCGGGATTACGAAA---GGCAA---AG---ACAGCAATATGGTAAA-AATTCAGGA------AT-A--A-----AGAAT-----------------AAT-AT---------------------------------------------------------------------------------------------------------------------------------------------------A-----TGTCATTT---------------------------------AA--------------------------TAATA----------------------AGATA-TTAATCA--GTT----TATT-TTCATTAT-CTTGCAGACAACTTGGATGGCGTTACGGAGCTGCGTTTGGAACAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droBia1
CCTGGCCTCCTCCAACCGGAGTCCCAGTGGCTCGCTGCAGCGCAAGGGCAAGCGGGTGCGGATTGTGACCAGCTACGATCCGGTGGATCGGGACTACGAGA---GGCAG---AG---GCAGCACTATGGTAAC-CTAA--------------T--T-----AGAAACAATTCT----------AAT-------------------------------------------------------------------------------------------------------------------------------------------AGTAG---------------------------------C--------------CC---------CCC--TT--------------ATAAAC----------------------AGATATTTAATCA--GTT----TACT--TCTTACT-TTTCCAGACAACCTGGATGGCGTCACGGAGCTGCGCTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droTak1
ACTGGCCTCCTCCAATCGCAGTCCCAGTGGTTCACTGCAGCGAAAGGGCAAGAGAGTAAGGATAGTGACCAGCTACGATCCGGTGGATCGGGATTACGAGA---GGCAG---AG---GCAGCATTATGGTAAA-AATTGGGA--------ATA--G-------------------TCACATGTAATATTCTTTAAATAAATAAATAAATCAAAAAAATAAATAAAAAAATAAATACAAAAATAAATAAACAAATTAATAAATAAATAGAAAAATAAATAAATAAATAAATAATAAAAAAAAAAATAAAATATATAATAATATATT---------TAATAAA-------------A--------T--------------CT---------CC----------------------------------------------------------------------CTC-TTC--TTC-TTTGTAGACAATCTGGATGGCGTCACGGAGCTTCGCTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droEle1
ACTGGCCTCCTCGAACAGGAGTCCCAGTGGATCGCTGCAGCGAAAGGGCAAAAGAGTACGCATAGTGACCAGCTATGATCCAGTGGATCGCGATTACGAAA---GGCAG---AG---GCAGCACTATGGTAAC-ATTTTGCGA------AA-T--G-----TGTAG-------------ATTTAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTT-----------------TCCTCTAAA--------------------------TAACC----------------------AGATTATTAATGA--GTT-AATCTTT-TTC--A-T-ATTTCAGACAACTTGGATGGCGTTACGGAACTGCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droRho1
ACTGGCCTCCTCCAATCGTAGTCCCAGTGGATCCTTGCAGCGAAAGGGCAAAAGAGTACGCATAGTGACCAGCTATGATCCGGTCGATCGGGATTACGAAA---GACAG---AG---ACAGCATTATGGTAAC-ATTTTGGGA------AATA--A-----ACAAA-----------------AAT-AC---------------------------------------------------------------------------------------------------------------------------------------------------A-----TAG--------C-GATTT---T--------------CT---------CCCCTAAATCAAAACCAGTTAGTAATT----------------------AGATA-T---------------TAATCTTC--ATT-TTTGCAGACAACTTGGATGGGGTAACGGAGCTGCGTGTGGAGCAGTATGAAATACACSizeHit CountTotal NormTotal
No Reads
droFic1
CCTGGCCTCCTCCAACCGGAGTCCCAGTGGATCCCTGCAGCGAAAGGGAAAGAGAGTACGCATAGTAACCAGCTATGATCCCGTGGATCGGGATTACGAAA---GGCAG---AG---GCAGCAATATGGTAAC-ATATAGGAA------AC----G-------AAA-------------CAT-ACT-AT-------------------------------------------------------------------------------------------------------------------------------------------------A-T-----TTG--------A-GATAT---TCATTATTTATTC--CTTATAAACAT--------------------------G----------------------TAACT-TATGGTA------TTCTTTT-CTA--TTT-TTTCCAGACAACTTGGATGGCGTCACGGAGCTGCGTTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droKik1
GCTGGCCTCCTCCAACCGGAGTCCCAGTGGCTCCCTGCAGCGCAAGGGCAAAAGAGTGCGCATAGTAACCAGCTACGATCCGGTGGATCGGGATTATGAGA---GGCAG---AG---GCAGCATTATGGTAAA-GGGCAGAG-------AA-------------AA-------------CATACAA---------------------------------------------------------------------------------------------------------------------------------------------------------GAATCTCTTTC-------------------------------AGGAA----------------------------TC----------------------CCATT-TTAAATATAATT----TACTCTTT--CTT-TTTCCAGATAATTTAGATGGCGTCACGGAACTCCGCTTGGAGCAGTACGAAATCCACSizeHit CountTotal NormTotal
No Reads
droAna3
CCTGGCCTCCTCCAATCGGAGCCCGAGTGGCTCGCTGCAGCGAAAGGGCAAGCGGGTGCGCATTGTGACCAGCTACGATCCTGTGGATCGGGACTACGAAA---GACAA---CG---ACAGCACTATGGTAGA-ATTATAAAGACAGAGAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCT-------------TCCCCAGAAAGTT--------------------------C----------------------AC------AAATA------ATGTACA-CCT--TCT-CTTTCAGACAACCTGGACGGCGTCACGGAGCTGCGTTTGGAGCAGTATGAGATCCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................GATCCTGTGGATCGGGACTACGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
.................................................AAGCGGGTGCGCATTGTGACCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......CTCCTCCAATCGGAGCCCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGCTGCGTTTGGAGCAGT...........2311.001000010
............................GGCTCGCTGCAGCGAAAGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAGCAGTATGAGATCCA.2211.001000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGGAGCTGCGTTTGGAG...............2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGGAGCTGCGTTTGGAGC..............2211.001010000
....................................GCAGCGAAAGGGCAAGCGGGTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGCTGCGTTTGGA................1811.001010000
.........................................GAAAGGGCAAGCGGGTGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGGACGGCGTCACGGAGCTGC.......................2511.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGACGGCGTCACGGAGCTGC.......................2411.001000001
....................................GCAGCGAAAGGGCAAGCGGGTGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.............................................................................ATCCTGTGGATCGGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.501000100
........................................................................................................GACAA---CG---ACAGCACTATGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
droBip1
GCTGGCTTCCTCCAATCGCAGCCCGAGTGGCTCGCTGCAGCGGAAGGGCAAGCGGGTCCGCATTGTGACCAGCTACGATCCCGTGGATCGGGACTACGAAA---GACAGCAAAG---ACAGCACTATGGTAGA-CAGACAGAG------AGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCT-------------ACCCGAGA-------------------------------G----------------------AGTTC-CCGAATA------ACTCCCA-TCT--TCC-ATTGCAGATAACCTGGACGGCGTCACGGAGCTTCGCTTGGAGCAGTACGAGATCCACSizeHit CountTotal NormTotal
No Reads
dp5
TTTGGCCTCCTCGAACCGCAGTCCCATGGGCTCCCTTCAGAGGAAGGGCAAACGTGTGCGCATCGTCACCAGCTATGATCCCGTGGATAGGGATTACGCGGAAAGGCAG---CG---ACAGCACTACGGTAGA-CAGCGAGCG--AGAGATCATCCTCACCAGAAGCAC-------------------CATTTAAA---------------------------------------------------------------------------------------------------------------------------------CGTTG---------------------------------T--------------CT---------CCC--------------------------------------------------------------TT----TGTCCCTT--CTA-TTTGCAGATAACTTGGATGGCGTCACGGAGCTGCGTTTGGAGCAGTACGAGATCCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGGAGCTGCGTTTGGAGC..............2212.0020010000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTGGAGCAGTACGAG......1911.0010100000000
TTTGGCCTCCTCGAACCGCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................CAGCTATGATCCCGTGGATAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................GATTACGCGGAAAGGCAG---C..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................CGTCACCAGCTATGATCCCGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGCTGCGTTTGGAGCA.............2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTTGGATGGCGTCACGGAGCT.........................2611.0010100000000
......................................................................AGCTATGATCCCGTGGATAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...........................................................................................GATTACGCGGAAAGGCAG---CG---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................GTGGATAGGGATTACGCGGAAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................GTCACCAGCTATGATCCCGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGGAGCTGCGTTTGGAGCAGT...........2511.0010000001000
.....................................CAGAGGAAGGGCAAACGTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGCTGCGTTTGGAGCAGT...........2311.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTTGGATGGCGTCACGGAGCTGC.......................2811.0010100000000
.....................................CAGAGGAAGGGCAAACGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGGAGCTGCGTTTGGA................2011.0010100000000
droWil2
CCTAGCCTCATCAAATCGTAGTCCAGCAGGATCGTTACGTCGCAAAGACAAACGCGTACGAATTGTGACTAGCTATGAACCGCTGGAAAGGGATTACGATC---GCCAG---AG---ACAGCATTTTGGTAAC-CACTTGCAT------TGCA--G-------GAT------TAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTCT-----GAAA--------------------------------TTCAAG--------------------------CAA------------------------CTGTA-TTA---A--ATT----AAAT-TTT--TAC-TTTGCAGATAACTTGGATGGCGTGACAGAACTACGACAAGAGCAATATGAAATTCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACAGAACTACGAC....................2814.00410300
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACAGAACTACGA.....................2714.00400400
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACTACGACAAGAGC..............2014.00400040
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACTACGACAAGAGCA.............2113.00300210
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACA..............................1812.00201010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACGACAAGAGCAATATGAAAT....2612.00220000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGACAAGAGCAATATGAA......2212.00202000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGACAGAACTACGACAAGAGC..............2512.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGAACTACGACAAGAGCAAT...........2512.00201100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTACGACAAGAGCAAT...........2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAATAT.........2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAATATGAAATT...2811.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAATATGA.......2411.00100010
......CTCATCAAATCGTAGTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGACAGAACTACGA.....................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACAGAACTACGACA...................2911.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGAACTACGACAAGAGCAATAT.........2711.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGAACTACGACAAG.................1911.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTGGATGGCGTGACAGAACTACGA.....................2811.00110000
.................................................AAACGCGTACGAATTGTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAATATG........2311.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCGTGACAGAACT.........................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAAT...........2011.00100100
....................GTCCAGCAGGATCGTTACGTCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACTACGACAAGA................1811.00100010
..............................ATCGTTACGTCGCAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
............................................................................GAACCGCTGGAAAGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
....................GTCCAGCAGGATCGTTACGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGAACTACGACAAGAGCA.............2311.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGACAAGAGCAATATGA.......2111.00100100
.......................................................................................AAGGGATTACGATC---GCCAG---AG---ACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACTTGGATGGCGTGACAGA............................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACGACAAGAGCAATATG........2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCAAC...........2011.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACTACGACAAGAGCAATAT.........2511.00100100
....................................................................................GGAAAGGGATTACGATC---GCC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACAG.............................1911.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTACGACAAGAGC..............1811.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTACGACAAGAGCA.............1811.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGATGGCGTGACAGAACT.........................2311.00100100
.................................................................................GCTGGAAAGGGATTACGATC---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................GGATTACGATC---GCCAG---AG---A.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
droVir3
TTTGGCATCCTCGAATG---------GCGGCTCGTTGCGGCGCAAGGGCAAGCATGTGCGCATCGTGACCAGCTACGATCCCTTGGAACGCGACTACGAGC---GAAAC---AG---ACAGCAGTTTGGTAAA-CATTTGTGC------AGCA--G-------------------TCG--------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCTCT-----GAAATCTCTGAGTAT--------------------------------------------------------------------------------AGCTG-CTAATCC--GGT----TCTTCATT--TCA-TTTGCAGATAACATTGATGGCGTGACGGAGCTGCGTCTGGAGCAGTACGAGATACACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTCTGGAGCAGTACG........1813.003000000030000000000000000000000000000000000000000000000000000000
..........................................CAAGGGCAAGCATGTGCGCATCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
..............................................GGCAAGCATGTGCGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTACGAGC---GAAAC---AG---ACAGCAGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTGCGTCTGGAGCA.............1911.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGGCGTGACGGAGCTGC.......................2211.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................ACGAGC---GAAAC---AG---ACAGCAGTTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
...........................................................GCATCGTGACCAGCTACGATCCCTTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGGCGTGACGGAGC..........................1911.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTGCGTCTGGAGC..............1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGACGGAGCTGCGTCT...................1811.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGAGCAGTACGAGA.....1811.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................CTACGAGC---GAAAC---AG---ACAGCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...........................................AAGGGCAAGCATGTGCGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................G--------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCTCT-----GAAATCTCTGA.................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...................................TGCGGCGCAAGGGCAAGCATGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGACGGAGCTGCGTCTGGA................2311.001001000000000000000000000000000000000000000000000000000000000000
.....CATCCTCGAATG---------GCGGCTCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTGACGGAGCTGCGTCTGGAGC..............2811.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................GCTACGATCCCTTGGAACGCGACTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.......................................GCGCAAGGGCAAGCATGTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATAACATTGATGGCGT..................................1911.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGGAGCAGTACGAGAT....2011.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
CCTGGCCTCCTCGAATG---------GCGGCTCGTTGCGGCGCAAAGGCAAGCACGTGCGCATCGTGACCAGCTACGATCCCCTAGAGCGGGACTATGAGC---GAAAC---AG---GCAGCAGTTCGGTAAA-CACTTGTGG------AGTA--G-------------------TTG--------------------------------------------------------------------------------------------------------------------------------------------------------AGGATACGAAC-------------ATCT-----------------------CGA-A-----------------------------T----------------------GCATA-CTGAATA------ATTTATT-CTC--TCT-CTTGCAGATAACATTGATGGCGTGACGGAGCTGCGCCTGGAGCAGTACGAGATACACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCGCCTGGAGCAGTAC.........1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGGCGTGACGGAGCTGCGC.....................2411.001000001
.............................................................................ATCCCCTAGAGCGGGACTATGAGC---GAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCTGGAGCAGTACGAG......2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCGCCTGGAGCAGTACGAGATACA.2811.001100000
.......................................................................GCTACGATCCCCTAGAGCGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................GCTCGTTGCGGCGCAAAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCTGGAGCAGTACGAGAT....2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGGAGCTGCGCCTGGAGCA.............2311.001100000
......................................GGCGCAAAGGCAAGCACGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................CTATGAGC---GAAAC---AG---GCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
GTTGGCCTCCTCGAATG---------GTGGCTCGCTGCGCCGCAAGGGCAAACACGTGCGAATCGTGACCAGCTACGATCCCGTGGAGCGGGACTACGATC---GACTACACAGACAGCAGCAGTTTGGTAAAACATTTGCGT------TGCA--G-------TTA------A------AGTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------C--------------AC---------TTG--AT--------------ATAATTAGGCAAACGTCTGAAGCAACTCGGCAA-CTAATCA--ATTTGATCTTT-ATC--GTACCCCATAGATAACGTTGATGGTGTGACGGAGCTGCGTGTGGAACAGTATGAGATACATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:06 AM