ID:

dsi_9140

 Coordinate:

2l:4303068-4303269 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.0

Flybase annnotation

five_prime_UTR [2l_4303270_4303368_-]; exon [2l_4303270_4303368_-]; five_prime_UTR [2l_4302997_4303067_-]; exon [2l_4302933_4303067_-]; intron [2l_4303068_4303269_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGGAAAAGTACGAGACGCGCGATATTGCAAAAGGCGGAAGCAGATTACGTGTAGGTCAAGGCCGCAGGGATGAGGGCGACTCCCATCTTTGACCTTGCTGTGGGTGAGGGGGTGCGGCGACCTTGGGTCAAGGACACGACCGAACAAGAGGCACCGAATCCAGGAAACGTAGTCAAAGTGGGGGCATGCCTGAGTGGGCGGGGGATGTTCCAGTGAAAGCAAAGTAACTTGATTATGACCTCTGTGTTGCAGCCAGGTAACGAACTTGTTGACTTCGTAACATTACATAATCGGGAGCCCAG
*****************************************************************************************************..((..((..(((....((((...)))).....)))..))..))....********************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.........ACGAGACGCGCGATATTG................................................................................................................................................................................................................................................................................... 18 0 1 9.00 9 5 4 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GGGGGCATGCCTGTTTGAGC....................................................................................................... 20 3 5 4.80 24 2 9 2 9 0 0 1 0 0 0 1
................................................................................................................................................................................................................................................................GTAACGAACTTGTTGACTTCGG........................ 22 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
........TACGAGACGCGCGATATTG................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......GTACGAGACGCGCGATATTG................................................................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GGGGGCATGCCTGTTTGAGCGG..................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CTAGGAAACGAACTTGTTGAC............................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................TACGTCCAGGTAACGAACTTGTTGA.............................. 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GGGGGCATGCCTGTTTGAGCG...................................................................................................... 21 3 2 1.00 2 0 0 1 0 0 0 0 1 0 0 0
........TACGAGACGCGCGATATTGCAAAAGGCGGA........................................................................................................................................................................................................................................................................ 30 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................GTTGACTTCGTAACATTA................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................ACGTGTAGGTCAAGGCCGC............................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
CGGAAAAGTACGAGACGCGCGAT....................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................GGGTGAGGGGGTGCGGC........................................................................................................................................................................................ 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................GAAGCAGATTACGTGTAGG....................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................AGGGGGTGCGGCGACCTTGGG............................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................AGGACACGACCGAACAAGA......................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................GCAGGGATGAGGGCGACTC............................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............ACGCGCGATATTGCAAAAGGC........................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTGATTATGACCTCTGTGTTGC.................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................ATTACATAATCGGAAGC.... 17 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................GGAGGCATGCCCGAGTGG......................................................................................................... 18 2 4 0.50 2 0 0 0 0 0 0 0 0 0 2 0
..............................................................CGCAGGGATGAGGGCGTTTT............................................................................................................................................................................................................................ 20 3 6 0.33 2 0 0 0 0 0 2 0 0 0 0 0
....................................................................................................................................................................................GGGGCATGCCTGTTTGAGCG...................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.GGGAAATGACGAGACGCGCG......................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................GGAGGGATGCCTGAGTGG......................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................GGGCATGCCTGTTTGAGCGG..................................................................................................... 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................GGGGGCATGCCTGAA............................................................................................................ 15 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................GCCTGCGTCGTCGGGGGAT................................................................................................ 19 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................GATGACTAACTTGTTGACTT........................... 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GGCATGCCTGTTTGAGCGG..................................................................................................... 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................CCCATCTTTGACATGGC............................................................................................................................................................................................................ 17 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................GGCATGCCTGTCTGAGCG...................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
........................TTGCACAAGGCGGAAGT..................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..........................GCAAAAGGCTCAAGCAG................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GGCATGCCTGTTTGAGCG...................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCCTTTTCATGCTCTGCGCGCTATAACGTTTTCCGCCTTCGTCTAATGCACATCCAGTTCCGGCGTCCCTACTCCCGCTGAGGGTAGAAACTGGAACGACACCCACTCCCCCACGCCGCTGGAACCCAGTTCCTGTGCTGGCTTGTTCTCCGTGGCTTAGGTCCTTTGCATCAGTTTCACCCCCGTACGGACTCACCCGCCCCCTACAAGGTCACTTTCGTTTCATTGAACTAATACTGGAGACACAACGTCGGTCCATTGCTTGAACAACTGAAGCATTGTAATGTATTAGCCCTCGGGTC
*********************************************************************************************************************************************************..((..((..(((....((((...)))).....)))..))..))....***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
..........................................................................................................................................................................................................................................................................ACAACTGATGCAGTGTAGTGT............... 21 3 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................CAACTGATGCAGTGTAGTGT............... 20 3 5 1.20 6 3 2 0 1 0 0 0
..........................................................................................................................................................................................................................................................................ACAAGTGATGCATTGTAGTGT............... 21 3 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................CCGCTCGAACCCAGTT........................................................................................................................................................................... 16 1 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................TCCACGCCGCTGGAAGCC............................................................................................................................................................................... 18 2 4 1.00 4 0 0 0 0 2 2 0
...........................................................................................................................................................................................................................................................................CAAGTGATGCATTGTAGTGT............... 20 3 3 0.33 1 0 1 0 0 0 0 0
........................................................................................................................................GCTGGCTTGTTCTCTG...................................................................................................................................................... 16 1 4 0.25 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................CAAGTGATGCAGTGTAATGT............... 20 3 5 0.20 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................CAATTGATGCATTGTAGTGT............... 20 3 6 0.17 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................ACAAGGTAAGTTTCGATTCA............................................................................. 20 3 9 0.11 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................AAAGTGATGCATTGTAATGT............... 20 3 14 0.07 1 0 0 0 1 0 0 0
...................................................................................................................................................GTCCGTGGCTTAGGTCT.......................................................................................................................................... 17 2 15 0.07 1 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................GTGAAGCAGTGTAATGT............... 17 2 19 0.05 1 0 0 0 1 0 0 0
.......CGTGCTCTGCTCGCTA....................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................AACTACTACTGGAGCCA......................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................AAAGGCGGTCCAGTGCTTG..................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:4303018-4303319 - dsi_9140 CGGAAAAGTACGA---------GACGC-GCGATATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGCAGGGATGAGGGCGACTC-CCATCTTTGACCTT-GCTGTGGGTGAGGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------CGTAGTCAAAGTGG-GG--------------G---CATGCCTGAGTGGGCGGGGGAT-GT-----TCCAGTGAAAG-----CAAAGTAACTTGATTATGACCTCTGTGTTGCAGCCAG-GTAACGAACTTGTTGACTT------CGTAA-CATTACATAATCGGGAGCC----CAG
droSec2 scaffold_5:2554337-2554635 - CGGAAAAGTACGA---------GACGC-GCGATATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGCAGGGATGAGGGCAACTC-CCATCTTTGACCTT-GCTGTGGGTGAGGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------TGTAGTCAAAGTGG-GA--------------G--GCATGCCTGAGTGGGCGGGGGAT-GT-----TCCAGTGCA---------AAGTAACTTGATTATGACCTCTGTGTTGCAGCCAG-GAAACGAACTTGTTGACTT------CGTAA-CATTACATAATCGGGAGCC----CAG
dm3 chr2L:4456471-4456773 - CGGAAAAGTACGA---------GACGC-CCGATATTGCAAAAAGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGTAGGGATGAGGGCAACTT-CCATCTTTGACCTT-GCTGTTGGTGATGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------CGTAGTCAAAGTGG-AG--------------G--GCATGCCTGTGTGGGCGGGGGAT-GT-----TCCAGTAAAAA-----CAAAGTAACTTGATTATGACCTCTGTGTTGCAGTTAG-GAAACGAACTTGTTGACTT------TGTAA-CATTACATAATCGGAAGCC----CAG
droEre2 scaffold_4929:4543678-4543958 - CGGAAAAGTGCGA---------TACGC-GCGACATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCACAGGGATGAGGGCGACCC-CCATTTTTGACCTT-GCTGCGGGTGGGGGGATGCGGCGACCTTGGGTCAAGGACACCAC-----------------------CGAACAAGGGGCTC----GATGTCCAGAAT----------------------------------------------------------------------------------------------ATGCCAAAGTGGACGGGGGAT-GC-----GCCTGTAAATG-----TAAATAAACTTGATTATGACCTCTATGTTACAGGCGC-GAAACGAACTTGTTGACTT------CAT---AATTACATAATCGGGAGCC----CAG
droYak3 2L:4491512-4491805 - CGGAAAAGTGCGA---------TACGC-GCGACATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGACATAGGGATGAGGGCAACCC--CATCTTTGACCTT-GGTTGG---GGGGGGATGCGTCGACCTTGGGTCAAGGACATGAC-----------------------CGAACAAGAGGCAT----CGAATCCAGGAA---G------------------------------------------------------T---GTCAAAGTGG-GG--------------G--ACGTGCCCAAGTGGGCGGGGGAT-GT-----TTGAGTAAATG-----TAAAGAAACTTGATTATGACCTCTGTGTTGCAGCCGC-GAAACGAACTAGTTGACTT------CAT---AATTACATAATCGGGAGCC----CAG
droEug1 scf7180000409005:339477-339762 - CGGAAAAGTACGA---------TACGC-GCT--ATTGCAAAAGGCGGAAGA--GGATTACGTGTAGGTCAAGGCCGTTTAGTTATGGGCAACCC-TTATCTTTGACCCTGACTTTG-----AGGGATGCGACGACCTTGGGTCAAGGATACGAG-----------------------CAAATAGGATGTCATATATGTATCCAGGGA---G------------------------------------------------------CTTGGTCGAAGTGG-GG--------------G--G--TGTCAAAGTGGTCGGGGGAG-TT-----TCCAGTAAAAA-----T--AGTGACTTAATTATGACCTCTGTGTTACAGCCG---C---GACCTTGTCTATATA-----------TATTACATAACTTAGAA------CAG
droBia1 scf7180000302188:1011896-1012192 - CGGAAAAGTACCTAGCATAAGCTACG---CG--ATTGCCACTGGCGGAAGA--AGATTACGTGTAGGTCAAGGCCATACGCTTATGGGCAGCCC-TTATCTTCGACCCC-ACCGAG-----AGGAACGCTACGACCTTGGGTCAATGACACGAC-----------------------CGCACAAGGGGCAA----AGAGTCCGGGAA---G------------------------------------------------------TG-GGTCGAAGTGG-GG--------------G--T----CTACAGGGGGCGGGGGAT-GC-----TCCAGTTCCAGCTGAAT-GAGTGACTCAATTATGACCTCTGTGTTACAGCGG---C---GTCCTTGTCTACCTGT-----TTGC-CATTACATAAGCGAGAGAC----CA-
droTak1 scf7180000415264:551901-552181 - CGGAAAAGTACGA---------TACGC------ATTGCCAAAGGCGGAAGA--AGATTACGTGTAGGTCAAGGTCGTGTAATAATGGGCGACCC-TTATCTTTGACCCC-GCTGTG-----AAGGATGCTACGTCCTTGGGTCAAGGACACGAC-----------------------CGAAAAAGGGCCAA----CGAGTCCAGTG--------------------------------------------------------------GGTCGAAATGG-GT--------------G--GCATGCCAAAGTGGGCGGGGAAT-GCGATGCTCCAGCTAA-A-----T--GGTGACTTAATTATGACCTCTGTGTTACAGCCAA-GC---AACCTTGTCTACCTGT----CTTACCTCTTACATAACCG-------------
droEle1 scf7180000491046:2101350-2101625 - CGGAAAAATACTA---------TTCGCAACG--ATTACAACAGGCGGAAGA--ATATTACGTGTAGGTCAAGGCCGAATGTTTACAGTCAACCC-TTATCGGTGACCTG-GCTTTG-----GGGGATGCGACGACCTTGGGTCAAGGACATGAC-----------------------CGAACAAGAGGCAA----TGAAAACAGGAA--------------------------------------------------------------------GTGG-GA--------------G--G-ATGCCACTGTGGGCGGGGGAG-GT-----TCCAGCTCAAA-----T--GGTAAC-TAATTATGACCTCTGTGTTACAGCCG---C---GACCTTGCCCACCTATT--CTGCAC-TATTACATAACTGAGAG---------
droRho1 scf7180000777227:248885-249153 - CGGAAAAATACTA---------TTCGCTGCG--ATTTCAACAGGCGGAAGA--AAAGTACGTGTAGGTCAAGGCCGAATGTTTACAGACAACCC-TTATCTATGACCTG-GCTTTG-----GGGGATGCGACGACCTTGGGTCAAGGACATGAC-----------------------CGAATGAGAGGCAA----TTAATACAGGAA---G------------------------------------------------------T-------------------------------------GATAAAGTGGGCGGGGGGTGGT-----TCCAGTTCAAG-----C--CGTAACTTAATTATGACCTCTGTGTTACAGACG---C---GACCTTGCCTACCC------CAT---TATTACATAACTGAGAACC----CAT
droFic1 scf7180000454155:78164-78440 + CGGAAAAGTTCGA---------TACGC-GCG--ATTACAAAAGGCGGAAGA--AAATTACGTGTAGGTCAAGGCCATATACTTACGGGAAACCC-TTATCTTTAACCCG-TCTGTT-----A-GGGTGTCACGACCTTGGGTCAAGGACATGAC-----------------------CGAATGAGTGGCAC----CGTTTCCAGCAA---G----------------------------------------------------------GTCAAAGTGT-GG--------------GCAACATG--AAAGTGGGCGGGGGAT-GT-----TTTTGTAAAAT-----T--AGCAACTTAATTATGATCTCTGTGTTACAGCCC---C---GACCTTGCCGACTC------TGC---TATTGCATAACTGAAAG---------
droKik1 scf7180000301476:244804-245109 - CGGAAAAATACAACGGAAAAGT-------TACTA--ACAGAACCAGGAAGCGTAGATTACGTGTAGGTCAAGGTCACCCAGTTGGAGACAACCCCTTATCTTTGACCCT-ATTTTCGTTTCTTTAATGAGATGTCCTTGGGTCAAGGACACCAC-----------------------CAAACAAGCGTCAA----TTTATCAAGGAA---A------------------------------------------------------CGC-ATCAAAT-A---AAACATCTTCAAGGGG--G-ATGCGAAAT--TACGAGGGAT-GT------CCAGGA--AG-----T-GATGAAATTAATTAGAGCCTCTGTGTTACAGCCAA--C---GACCTTAC-GACCG-------AC---GATTACATAACTTACTGCCGACTCTG
droAna3 scaffold_12943:3389277-3389538 + CGGAAAAGTACT-----------------TAGTATTACAACC--AGGAAGCACTGATA-ACAGTAGGTCAAGGACATACA-----------TAC-TTATCTTTGGGATG-ACTTTG-----GGCCTCGATGCCACCTTGGGTCAAGGGCATCAGTCAATAATTCG--TTAAAAAGGACGAACAGGATGCAACGAGTG----GCCTCTGGCCACTGGGAGGGGTGTA-----------------------------------------------------------------------------------ATAGGCTGGTGGT------------------A-----T-GATGAAATTAATTAAGGTCTCTATGTTACAGCCG---G---GACCTTGGC-ACC-------------TGTTACATAAGTAGAAGC--------
droBip1 scf7180000396433:284227-284487 + CGGAAAAGTACG-----------------TAGTATTACAACCAGGA--AGCACAGATAAC-AGTAGGTCAAGGACATACAAAC-------ATAC-TTATCTTTGGGATG-ACTTTG-----GGCAAAGATACAACCTTGGGTCAAGGGCACCAGTCAATAAT-CGGCTTAAAAAGGACGAACAGGATGCAA----CGG--------------------------------------------------------------------GTGGCCGGGATGG-------------------------------------GGGGAT-GT-----AACGAATTTTGTTGGAT-GGTGAAATTAATTAAGGTCTCTATGTTACAGCCG---G---GACCTTGGC-ACC-------------TGTTACATAACTGAGAA---------
dp5 4_group3:9285214-9285464 + GA----------------------------------------------AGCAAACGTTACGTGTAGGTCAAGGCTTATCAT------------------A------------TTTT-----GGCAGTGGAACGTCCTTGGGTCAAGGACACCAT-----------------------CGAATTAAATGTAATAAGAA----GACGAAAGACCTTGGCAAGGGTGAAAGAGAGAGGCGGAGATTGGCAGAACATCTGATGTGAACGTG-TATCGAAGTGAAG----TTA------------CGTTCT-------------------------------------------------------AACGTGTGGTTATTGCAGCTCTTTGGACAAATTTACTAACTG-ACAACCACCG-CATTACATAA----GAGCC----GTA
droPer2 scaffold_8:475818-476068 + GA----------------------------------------------AGCAAACGTTACGTGTAGGTCAAGGCTTATCAT------------------A------------TTTT-----GGCAGTGGAACGTCCTTGGGTCAAGGACACCAT-----------------------CGAATTAAATGTAATAAGAA----GACGAAAGACCTTGGCAAGGGTGAAAGAGAGAGGCGGAGATTGGCAGAACATCTTATGTGAACGTG-TATCGAAGTGAAG----TTA------------CGTTCT-------------------------------------------------------AACGTGTGTTTATTGCAGCTCTTTGGACAAATTTACTAACTG-ACAACCACCG-CATTACATAA----GAGCC----GTA
droVir3 scaffold_12963:17711309-17711329 + AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATAACG---AGCA----AAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGAAAAGTACGA---------GACGC-GCGATATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGCAGGGATGAGGGCGACTC-CCATCTTTGACCTT-GCTGTGGGTGAGGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------CGTAGTCAAAGTGG-GG--------------G---CATGCCTGAGTGGGCGGGGGAT-GT-----TCCAGTGAAAG-----CAAAGTAACTTGATTATGACCTCTGTGTTGCAGCCAG-GTAACGAACTTGTTGACTT------CGTAA-CATTACATAATCGGGAGCC----CAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........ACGA---------GACGC-GCGATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................1819.00954000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GTAACGAACTTGTTGACTT------CGG.............................2212.00200200000000000000
........TACGA---------GACGC-GCGATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
.......GTACGA---------GACGC-GCGATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................2012.00211000000000000000
........TACGA---------GACGC-GCGATATTGCAAAAGGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTTGACTT------CGTAA-CATTA.....................1811.00100010000000000000
..........................................................ACGTGTAGGTCAAGGCCGC............................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
CGGAAAAGTACGA---------GACGC-GCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
...................................................................................................................GGGTGAGGGGGTGCGGC.....................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..............................................GAAGC--AGATTACGTGTAGG......................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
........................................................................................................................AGGGGGTGCGGCGACCTTGGG............................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................AGGACACGAC-----------------------CGAACAAGA...............................................................................................................................................................................................................................................................1911.00100100000000000000
...........................................................................GCAGGGATGAGGGCGACTC-..........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................ACGC-GCGATATTGCAAAAGGC............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTGATTATGACCTCTGTGTTGC................................................................2211.00100000000100000000
.....................................................................................................................................................................................................................................................................................GG-GG--------------G---CATGCCTGAA...................................................................................................................................1560.17100000001000000000
droSec2
CGGAAAAGTACGA---------GACGC-GCGATATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGCAGGGATGAGGGCAACTC-CCATCTTTGACCTT-GCTGTGGGTGAGGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------TGTAGTCAAAGTGG-GA--------------G--GCATGCCTGAGTGGGCGGGGGAT-GT-----TCCAGTGCA---------AAGTAACTTGATTATGACCTCTGTGTTGCAGCCAG-GAAACGAACTTGTTGACTT------CGTAA-CATTACATAATCGGGAGCC----CAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................GC-GCGATATTGCAAAAGGCGGAAGC--A...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................................AGGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................................TGCAAAAGGCGGAAGC--AGAT................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
....AAAGTACGA---------GACGC-GCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.................................ATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
....................................GCAAAAGGCGGAAGC--AGATTACGTG..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.GGAAAAGTACGA---------GACGC-GC...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.................................ATTGCAAAAGGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
............A---------GACGC-GCGATATTGCAAAAGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.........ACGA---------GACGC-GCGATATTGCAAAAGGC............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
................................TATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..............................GATATTGCAAAAGGCGGAAGC--AGA.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.................................ATTGCAAAAGGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
......AGTACGA---------GACGC-GCGATAT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................AA-CATTACATAATCGGGAGC........2011.0010010
...................................TGCAAAAGGCGGAAGC--AGA.................................................................................................................................................................................................................................................................................................................................................................................................1920.5010001
dm3
CGGAAAAGTACGA---------GACGC-CCGATATTGCAAAAAGCGGAAGC--AGATTACGTGTAGGTCAAGGCCGTAGGGATGAGGGCAACTT-CCATCTTTGACCTT-GCTGTTGGTGATGGGGTGCGGCGACCTTGGGTCAAGGACACGAC-----------------------CGAACAAGAGGCAC----CGAATCCAGGAA---A------------------------------------------------------CGTAGTCAAAGTGG-AG--------------G--GCATGCCTGTGTGGGCGGGGGAT-GT-----TCCAGTAAAAA-----CAAAGTAACTTGATTATGACCTCTGTGTTGCAGTTAG-GAAACGAACTTGTTGACTT------TGTAA-CATTACATAATCGGAAGCC----CAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTTGTTGACTT------TGTAA-CATT......................26117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTACGA---------GACGC-CCGATAT......................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTTGACTT------TGTAA-CATT......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAACGAACTTGTTGACTT------TGTAA-CATT......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGGAAAAGTACGA---------GACGC-C............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTTGACTT------TGTAA-CATTT.....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GTCAAAGTGG-AG--------------G--GCATGCCTG.....................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTTGACTT------TGTAA-CATT......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGTACGA---------GACGC-CCGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACTTGATTATGACCTCTGTGT...................................................................2112.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTTAG-GAAACGAACTTGTTGACTT------................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
....AAAGTACGA---------GACGC-CCGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........................................................................GCCGTAGGGATGAGGGCAACTT-CCATCTT...................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..................................................................GTCAAGGCCGTAGGGATGA....................................................................................................................................................................................................................................................................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000
...................................TGCAAAAAGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................AGGCCGTAGGGATGAGGG.................................................................................................................................................................................................................................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000011000000000000000000000000000000000000000000000000
..............................................................GTAGGTCAAGGCCGTAGGGATGAGG..................................................................................................................................................................................................................................................................................................................................................................2521.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................AA-CATTACATAATCGGAAGCC----CA.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTGTGTTGCAGTTAG-GAA......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.GGAAAAGTACGA---------GACGC-CCGATAT......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAG-GAAACGAACTTGTTG..........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................TGGTGATGGGGTGCGGCG....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GACCTCTGTGTTGCAGTTAG-GAAAC....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TGATTATGACCTCTGTGTTGC................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTTGTTGACTT------TGTAA-CA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTAG-GAAACGAACTTG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATTATGACCTCTGTGTTGCAG..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AC----CGAATCCAGGAA---A------------------------------------------------------CG..............................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AG-GAAACGAACTTGTTGACTT------TGTAA-C.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AGTCAAAGTGG-AG--------------G--GCATGCCTGTG...................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................GTAGGTCAAGGCCGTAGGGATGA....................................................................................................................................................................................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000
..................................................................................................TCTTTGACCTT-GCTGTTGGTGATGGG............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAACGAACTTGTTGACTT------TGTAA-CAT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CTGTGTTGCAGTTAG-GAAACG...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.GGAAAAGTACGA---------GACGC-C............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
..........................C-CCGATATTGCAAAAAGC............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GG-AG--------------G--GCATGCCTGTGTGGGC..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCAAAAAGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTGATTATGACCTCTGTGTTGC................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAAAAGTACGA---------GACGC-CCGATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................TTGCAAAAAGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
........................................................................GCCGTAGGGATGAGGGCAACTT-CCATC.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AACTTGATTATGACCTCTGT.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
CGGAAAAGTACGA---------GACGC-CCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTGACCTT-GCTGTTGGTGA................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACGAACTTGTTGACTT------TGT.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTGG-AG--------------G--GCATGCCTGTGTGG................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATTGCAAAAAGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTTGACTT------TGTAA-C.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GTGG-AG--------------G--GCATGCCTGTGTGGGCGG............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................AC----CGAATCCAGGAA---A------------------------------------------------------CGTAGTCAAA......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CGTAGTCAAAGTGG-AG--------------G--G.............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................CGC-CCGATATTGCAAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACGA---------GACGC-CCGATATTG....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................CTT-GCTGTTGGTGATGGG............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGTACGA---------GACGC-CCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........GA---------GACGC-CCGATATTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAAAGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTAA-CATTACATAATCGGAAGCC----CA.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AACGAACTTGTTGACTT------TGTAA-CAT.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACTTGATTATGACCTCTG......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCCTGTGTGGGCGGGGGAT-GT-----TCCAG..........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AACTTGATTATGACCTCTGTGTTGCAG..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GCTGTTGGTGATGGGGTG.........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................GATGGGGTGCGGCGACCTTGGGTCAA........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........CGA---------GACGC-CCGATATTGCAAA................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTTGACTT------TGTAA-CA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A---A------------------------------------------------------CGTAGTCAAAGTGG-AG--------------.................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AACTTGATTATGACCTCTG......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAAGTACGA---------GACGC-CCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................TGTTGGTGATGGGGTGCGGCGACCT................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GGCCGTAGGGATGAGGGC................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AC-----------------------CGAACAAGAGGCAC----CGAAA.................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................AGGTCAAGGCCGTAGGGATGA....................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATTGCAAAAAGCGGAAGC--AGATTTT.............................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................GTAGGTCAAGGCCGTAGGGATGAGGGG................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGAAAAGTGCGA---------TACGC-GCGACATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGCCACAGGGATGAGGGCGACCC-CCATTTTTGACCTT-GCTGCGGGTGGGGGGATGCGGCGACCTTGGGTCAAGGACACCAC-----------------------CGAACAAGGGGCTC----GATGTCCAGAAT----------------------------------------------------------------------------------------------ATGCCAAAGTGGACGGGGGAT-GC-----GCCTGTAAATG-----TAAATAAACTTGATTATGACCTCTATGTTACAGGCGC-GAAACGAACTTGTTGACTT------CAT---AATTACATAATCGGGAGCC----CAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................ATTGCAAAAGGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............................CGACATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.................................................................................................................GCGGGTGGGGGGATGCGGCGA...................................................................................................................................................................................................................................................................................................................2111.0010000010
........TGCGA---------TACGC-GCGACATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................GCAAAAGGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
............................GCGACATTGCAAAAGGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
........................................AAGGCGGAAGC--AGATTACGTGCG........................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
............................GCGACATTGCAAAAGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................................TGCAAAAGGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
..............................................GAAGC--AGATTACGTGTAGGC.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..............................GACATTGCAAAAGGCGGAAGC--A...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..........................C-GCGACATTGCAAAAGGCGGAAGC--A...................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AT---AATTACATAATCGGGAGCC----...2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTTGACTT------CAT---AAT.......................1911.0011000000
....AAAGTGCGA---------TACGC-GCGACATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..............................GACATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
droYak3
CGGAAAAGTGCGA---------TACGC-GCGACATTGCAAAAGGCGGAAGC--AGATTACGTGTAGGTCAAGGACATAGGGATGAGGGCAACCC--CATCTTTGACCTT-GGTTGG---GGGGGGATGCGTCGACCTTGGGTCAAGGACATGAC-----------------------CGAACAAGAGGCAT----CGAATCCAGGAA---G------------------------------------------------------T---GTCAAAGTGG-GG--------------G--ACGTGCCCAAGTGGGCGGGGGAT-GT-----TTGAGTAAATG-----TAAAGAAACTTGATTATGACCTCTGTGTTGCAGCCGC-GAAACGAACTAGTTGACTT------CAT---AATTACATAATCGGGAGCC----CAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................T------CAT---AATTACATAATCGGGAGC........2211.00100000010000
.........................................AGGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000
....................................GCAAAAGGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
..........CGA---------TACGC-GCGACATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.................................ATTGCAAAAGGCGGAAGC--AGATTACG............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................................................................................................................................................AGGACATGAC-----------------------CGAACAAGAGG.............................................................................................................................................................................................................................................................2111.00100010000000
......................................AAAAGGCGGAAGC--AGATTACGT...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........TGCGA---------TACGC-GCGACATTGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000
.............................................................................................................................................................................................AT----CGAATCCAGGAA---G------------------------------------------------------T---GTCAAAGT....................................................................................................................................................................2411.00100000010000
.........................GC-GCGACATTGCAAAAGGC............................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.........................GC-GCGACATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
............................GCGACATTGCAAAAGGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACATAATCGGGAGCC----C..1911.00100000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AATTACATAATCGGGAGCC----CA.2111.00100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................CCGC-GAAACGAACTAGTTGACTT------C...............................2411.00110000000000
............................GCGACATTGCAAAAGGCGGAAGC--....................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
CGGAAAAGTACGA---------TACGC-GCT--ATTGCAAAAGGCGGAAGA--GGATTACGTGTAGGTCAAGGCCGTTTAGTTATGGGCAACCC-TTATCTTTGACCCTGACTTTG-----AGGGATGCGACGACCTTGGGTCAAGGATACGAG-----------------------CAAATAGGATGTCATATATGTATCCAGGGA---G------------------------------------------------------CTTGGTCGAAGTGG-GG--------------G--G--TGTCAAAGTGGTCGGGGGAG-TT-----TCCAGTAAAAA-----T--AGTGACTTAATTATGACCTCTGTGTTACAGCCG---C---GACCTTGTCTATATA-----------TATTACATAACTTAGAA------CAGSizeHit CountTotal NormTotal
No Reads
droBia1
CGGAAAAGTACCTAGCATAAGCTACG---CG--ATTGCCACTGGCGGAAGA--AGATTACGTGTAGGTCAAGGCCATACGCTTATGGGCAGCCC-TTATCTTCGACCCC-ACCGAG-----AGGAACGCTACGACCTTGGGTCAATGACACGAC-----------------------CGCACAAGGGGCAA----AGAGTCCGGGAA---G------------------------------------------------------TG-GGTCGAAGTGG-GG--------------G--T----CTACAGGGGGCGGGGGAT-GC-----TCCAGTTCCAGCTGAAT-GAGTGACTCAATTATGACCTCTGTGTTACAGCGG---C---GTCCTTGTCTACCTGT-----TTGC-CATTACATAAGCGAGAGAC----CA-SizeHit CountTotal NormTotal
No Reads
droTak1
CGGAAAAGTACGA---------TACGC------ATTGCCAAAGGCGGAAGA--AGATTACGTGTAGGTCAAGGTCGTGTAATAATGGGCGACCC-TTATCTTTGACCCC-GCTGTG-----AAGGATGCTACGTCCTTGGGTCAAGGACACGAC-----------------------CGAAAAAGGGCCAA----CGAGTCCAGTG--------------------------------------------------------------GGTCGAAATGG-GT--------------G--GCATGCCAAAGTGGGCGGGGAAT-GCGATGCTCCAGCTAA-A-----T--GGTGACTTAATTATGACCTCTGTGTTACAGCCAA-GC---AACCTTGTCTACCTGT----CTTACCTCTTACATAACCG-------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGGAAAAATACTA---------TTCGCAACG--ATTACAACAGGCGGAAGA--ATATTACGTGTAGGTCAAGGCCGAATGTTTACAGTCAACCC-TTATCGGTGACCTG-GCTTTG-----GGGGATGCGACGACCTTGGGTCAAGGACATGAC-----------------------CGAACAAGAGGCAA----TGAAAACAGGAA--------------------------------------------------------------------GTGG-GA--------------G--G-ATGCCACTGTGGGCGGGGGAG-GT-----TCCAGCTCAAA-----T--GGTAAC-TAATTATGACCTCTGTGTTACAGCCG---C---GACCTTGCCCACCTATT--CTGCAC-TATTACATAACTGAGAG---------SizeHit CountTotal NormTotal
No Reads
droRho1
CGGAAAAATACTA---------TTCGCTGCG--ATTTCAACAGGCGGAAGA--AAAGTACGTGTAGGTCAAGGCCGAATGTTTACAGACAACCC-TTATCTATGACCTG-GCTTTG-----GGGGATGCGACGACCTTGGGTCAAGGACATGAC-----------------------CGAATGAGAGGCAA----TTAATACAGGAA---G------------------------------------------------------T-------------------------------------GATAAAGTGGGCGGGGGGTGGT-----TCCAGTTCAAG-----C--CGTAACTTAATTATGACCTCTGTGTTACAGACG---C---GACCTTGCCTACCC------CAT---TATTACATAACTGAGAACC----CATSizeHit CountTotal NormTotal
No Reads
droFic1
CGGAAAAGTTCGA---------TACGC-GCG--ATTACAAAAGGCGGAAGA--AAATTACGTGTAGGTCAAGGCCATATACTTACGGGAAACCC-TTATCTTTAACCCG-TCTGTT-----A-GGGTGTCACGACCTTGGGTCAAGGACATGAC-----------------------CGAATGAGTGGCAC----CGTTTCCAGCAA---G----------------------------------------------------------GTCAAAGTGT-GG--------------GCAACATG--AAAGTGGGCGGGGGAT-GT-----TTTTGTAAAAT-----T--AGCAACTTAATTATGATCTCTGTGTTACAGCCC---C---GACCTTGCCGACTC------TGC---TATTGCATAACTGAAAG---------SizeHit CountTotal NormTotal
No Reads
droKik1
CGGAAAAATACAACGGAAAAGT-------TACTA--ACAGAACCAGGAAGCGTAGATTACGTGTAGGTCAAGGTCACCCAGTTGGAGACAACCCCTTATCTTTGACCCT-ATTTTCGTTTCTTTAATGAGATGTCCTTGGGTCAAGGACACCAC-----------------------CAAACAAGCGTCAA----TTTATCAAGGAA---A------------------------------------------------------CGC-ATCAAAT-A---AAACATCTTCAAGGGG--G-ATGCGAAAT--TACGAGGGAT-GT------CCAGGA--AG-----T-GATGAAATTAATTAGAGCCTCTGTGTTACAGCCAA--C---GACCTTAC-GACCG-------AC---GATTACATAACTTACTGCCGACTCTGSizeHit CountTotal NormTotal
No Reads
droAna3
CGGAAAAGTACT-----------------TAGTATTACAACC--AGGAAGCACTGATA-ACAGTAGGTCAAGGACATACA-----------TAC-TTATCTTTGGGATG-ACTTTG-----GGCCTCGATGCCACCTTGGGTCAAGGGCATCAGTCAATAATTCG--TTAAAAAGGACGAACAGGATGCAACGAGTG----GCCTCTGGCCACTGGGAGGGGTGTA-----------------------------------------------------------------------------------ATAGGCTGGTGGT------------------A-----T-GATGAAATTAATTAAGGTCTCTATGTTACAGCCG---G---GACCTTGGC-ACC-------------TGTTACATAAGTAGAAGC--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGGC-ACC-------------TGTTACATAAGTAGAAG.........2511.001000010
...................................TACAACC--AGGAAGCACTGATA-..............................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................CTCTGGCCACTGGGAGGGG...........................................................................................................................................................................................................................1911.001000010
.................................ATTACAACC--AGGAAGCACTGAT................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................ACAACC--AGGAAGCACTGATA-ACAGTA........................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............................AGTATTACAACC--AGGAAGCACT...................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...........................................................................................................................................................................................................CTCTGGCCACTGGGAGGGGT..........................................................................................................................................................................................................................2011.001000010
droBip1
CGGAAAAGTACG-----------------TAGTATTACAACCAGGA--AGCACAGATAAC-AGTAGGTCAAGGACATACAAAC-------ATAC-TTATCTTTGGGATG-ACTTTG-----GGCAAAGATACAACCTTGGGTCAAGGGCACCAGTCAATAAT-CGGCTTAAAAAGGACGAACAGGATGCAA----CGG--------------------------------------------------------------------GTGGCCGGGATGG-------------------------------------GGGGAT-GT-----AACGAATTTTGTTGGAT-GGTGAAATTAATTAAGGTCTCTATGTTACAGCCG---G---GACCTTGGC-ACC-------------TGTTACATAACTGAGAA---------SizeHit CountTotal NormTotal
No Reads
dp5
GA----------------------------------------------AGCAAACGTTACGTGTAGGTCAAGGCTTATCAT------------------A------------TTTT-----GGCAGTGGAACGTCCTTGGGTCAAGGACACCAT-----------------------CGAATTAAATGTAATAAGAA----GACGAAAGACCTTGGCAAGGGTGAAAGAGAGAGGCGGAGATTGGCAGAACATCTGATGTGAACGTG-TATCGAAGTGAAG----TTA------------CGTTCT-------------------------------------------------------AACGTGTGGTTATTGCAGCTCTTTGGACAAATTTACTAACTG-ACAACCACCG-CATTACATAA----GAGCC----GTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................TAAGAA----GACGAAAGACCTTGGCAAG.............................................................................................................................................................................................................................2512.0020000000020
..................................................................................................................TT-----GGCAGTGGAACGTCCTT...............................................................................................................................................................................................................................................................................................................1912.0020100001000
...............................................................................................................................GGAACGTCCTTGGGTCAAG.......................................................................................................................................................................................................................................................................................................1912.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................CTAACTG-ACAACCACCG-C.........................1811.0010100000000
.....................................................ACGTTACGTGTAGGTCAAGGCTTATC..........................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
......................................................................AGGCTTATCAT------------------A------------TTTT-----GGCAGT..........................................................................................................................................................................................................................................................................................................................2211.0010000010000
.................................................................................................................................................................................................................................................................................................................................................................................................GGACAAATTTACTAACTG-ACAACC...............................2411.0010010000000
..........................................................................................................................GCAGTGGAACGTCCTTGGGTC..........................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATTTACTAACTG-ACAACCACCG-CATT......................2711.0010001000000
..........................................................................TTATCAT------------------A------------TTTT-----GGCAGTGGAACGTCCTT...............................................................................................................................................................................................................................................................................................................2911.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACTAACTG-ACAACCACCG-CATTACA...................2611.0010000000010
........................................................................................................................................................................................................................................................................................................................................................................................................TTTACTAACTG-ACAACCACCG-CATT......................2511.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACTAACTG-ACAACCACCG-CATTACA...................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................ACGTGTGGTTATTGCAGCTC...........................................................2011.0010010000000
...............................................................................................................................................................................................................................................................GATGTGAACGTG-TATCGAA......................................................................................................................................................................1911.0010000010000
....................................................................................................................................................................................................................TTGGCAAGGGTGAAAGAGAGAGGCGGA..........................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................GGAACGTCCTTGGGTCAAGGA.....................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................ATAAGAA----GACGAAAGACCTTG..................................................................................................................................................................................................................................2111.0010100000000
.......................................................GTTACGTGTAGGTCAAGGCTT.............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................AGTGGAACGTCCTTGGGTCA.........................................................................................................................................................................................................................................................................................................2011.0010000001000
..........................................................................................................................GCAGTGGAACGTCCTTGGGTCAAG.......................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................AAACGTTACGTGTAGGTCAA..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTAACTG-ACAACCACC............................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTACTAACTG-ACAACCACCG-C.........................2111.0010010000000
...................................................................................................A------------TTTT-----GGCAGTGGAACGTCCTT...............................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
GA----------------------------------------------AGCAAACGTTACGTGTAGGTCAAGGCTTATCAT------------------A------------TTTT-----GGCAGTGGAACGTCCTTGGGTCAAGGACACCAT-----------------------CGAATTAAATGTAATAAGAA----GACGAAAGACCTTGGCAAGGGTGAAAGAGAGAGGCGGAGATTGGCAGAACATCTTATGTGAACGTG-TATCGAAGTGAAG----TTA------------CGTTCT-------------------------------------------------------AACGTGTGTTTATTGCAGCTCTTTGGACAAATTTACTAACTG-ACAACCACCG-CATTACATAA----GAGCC----GTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................AT------------------A------------TTTT-----GGCAGTGGAAC.....................................................................................................................................................................................................................................................................................................................1812.002200000
.......................................................................................................................................................................................................................GCAAGGGTGAAAGAGAGAGG..............................................................................................................................................................................................................2012.002000002
...........................................................................................................................................................................................................CGAAAGACCTTGGCAAGGGT..........................................................................................................................................................................................................................2011.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................CAAATTTACTAACTG-ACAACCACC............................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................CTTTGGACAAATTTACTAACT.......................................2111.001100000
......................................................................................................................................................................................................................................................AGAACATCTTATGTGAACGT...............................................................................................................................................................................2011.001100000
.........................................................TACGTGTAGGTCAAGGCT..............................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.A----------------------------------------------AGCAAACGTTACGTGTAGGTCAAGGCT..............................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGGACAAATTTACTAACT.......................................1911.001001000
............................................................................ATCAT------------------A------------TTTT-----GGCAGTGGAAC.....................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................AGGGTGAAAGAGAGAGGC.............................................................................................................................................................................................................1811.001000010
..................................................................................................................................................................................................................................................................................................................................................................................TTATTGCAGCTCTTTGGAC....................................................1911.001001000
droVir3
AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACATAACG---AGCA----AAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads

Generated: 05/18/2015 at 10:07 AM