ID:

dsi_9107

Coordinate:

3l:14193114-14193263 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_14192748_14193113_-]; CDS [3l_14192748_14193113_-]; intron [3l_14193114_14195559_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGAAAGATGGCTACCATCTGCTGATGTTTAAATATAGAAATTATATTTTCAATTAGTGGTGTTAGAGAAATATATTTTAACTGATTGCAACTGAATAGTAACGAAATTAAATTGTAAAAAAATATTAAATTCGTTTTTATAGTTTATAATTTAAATTTTGGAATATATAGAACTAATTTAATTTGCATACGTTTTTTCAGCTACAATGACGAGCCCAACAGAGCGTCGCGCTACTGCCGGCCCCAAGTGA
**************************************************..(((((...(((((....(((((((((((..(((((.((((..(((..((((((.(((((((.......))).)))).))))))..)))))))..)))))......)))))))))))....)))))...)))...............))**************************************************
Read size # Mismatch Hit Count Total Norm Total M024
male body
M053
female body
SRR553486
Makindu_3 day-old ovaries
M025
embryo
O001
Testis
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
M023
head
................................................................................................................................................................................................................ACGAGCCCAACAGAGCGTCGCGCTA................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGCGCTACTGCCGGC......... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AATGACGAGCCCAACAGA............................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................CAGAGCGTCGCGCTACTAC............. 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
TGAAAGATGGCTACCATCTG...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........GCTACGATCTGCTGA.................................................................................................................................................................................................................................. 15 1 16 0.94 15 0 0 2 0 0 1 0 7 5 0
..............................................................................................................................................................TGGAATGTATAGAAGTAA.......................................................................... 18 2 11 0.55 6 0 0 6 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTACTACCGGCCCC...... 15 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
.........GCTACGATCTGCTGAGGTTA............................................................................................................................................................................................................................. 20 3 6 0.33 2 0 0 0 0 0 1 1 0 0 0
..................................................AATTTGTGGTGTTAGAGA...................................................................................................................................................................................... 18 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.........GCTACGATCTGCTGAGGT............................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1
.........GCTACCATCTACTGAGG................................................................................................................................................................................................................................ 17 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0
.........GCTACCATCCGCTGA.................................................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0
........TGCTACCATCTGCTGAGGCT.............................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0
..........CTACGATCTGCTGAGGTT.............................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................TGGAATGTATAGAAGTATTT........................................................................ 20 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0
..................................................................................................TAACGAAATTGTATTGTAAAA................................................................................................................................... 21 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................ACGTTTTTTCGGCTA............................................... 15 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0
.........GCTACGATCTGCTGAGG................................................................................................................................................................................................................................ 17 2 14 0.07 1 0 0 0 0 0 0 0 1 0 0
.......TGGTTACGATCTGCTGA.................................................................................................................................................................................................................................. 17 2 14 0.07 1 0 0 1 0 0 0 0 0 0 0
..........CTACGATCTGCTGAGGTTA............................................................................................................................................................................................................................. 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ACTTTCTACCGATGGTAGACGACTACAAATTTATATCTTTAATATAAAAGTTAATCACCACAATCTCTTTATATAAAATTGACTAACGTTGACTTATCATTGCTTTAATTTAACATTTTTTTATAATTTAAGCAAAAATATCAAATATTAAATTTAAAACCTTATATATCTTGATTAAATTAAACGTATGCAAAAAAGTCGATGTTACTGCTCGGGTTGTCTCGCAGCGCGATGACGGCCGGGGTTCACT
**************************************************..(((((...(((((....(((((((((((..(((((.((((..(((..((((((.(((((((.......))).)))).))))))..)))))))..)))))......)))))))))))....)))))...)))...............))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
O001
Testis
M025
embryo
SRR553488
RT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
.............................................................................................................................................................AACCTTATATATCTTGATT.......................................................................... 19 0 1 1.00 1 0 1 0 0 0
.............................................AAAAGTTAATCACCACATTCAT....................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................GGGTTGTCGAGCAGCGCG................... 18 2 5 0.20 1 0 0 1 0 0
............................................................................................................................................................................................................TTCCTGCTGAGGTTGTCTCG.......................... 20 3 10 0.20 2 0 0 0 2 0
......................................................................................CGTTGTCTTATCCTGGCTTT................................................................................................................................................ 20 3 10 0.10 1 1 0 0 0 0
...............................................................................................................................................................................................AAAAAAGTCGATGTTCAT......................................... 18 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14193064-14193313 - dsi_9107 TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGAAA----------TATATT---TTAACTGATTG---------CA-ACTGAA-----------------------------------------------------------------------------------TAGTAACGAAATTAAATTGTAAA----A---AAATATTAAAT----------------TCGTTTT-------------------------------------------------------------------------TAT---AGTT----------------TATAAT--------TTAAAT--------TT---------------TGGAATATAT----AG---------------AACTAATTT-AATTTGCA---TACGTTTTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGA
droSec2 scaffold_0:6665872-6666125 - TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGAAA----------TATATT---TTAAATGATTG---------CAAACTAAA-----------------------------------------------------------------------------------TAGTAACGAAATTAAATTGTAAA----AAAAAAATATTAAAT----------------TCGTTTT-------------------------------------------------------------------------TAT---AGTT----------------TATAAT--------TTAAGT--------TT---------------TGGAATATAG----AG---------------AACTAATTT-AATTTGGA---TTCGTTGTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGACCCCAAGTCA
dm3 chr3L:14540533-14540867 - TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGATA----------TATATT---TTAACTGATTGTGATATATTCAACC--------------TTCGATAT--------------TCAACCTTTTGATTTTTTGAACGAATTCAACACTCATTTAAAAGGACAGAATAGTAACGAAATTAAGTTATGAA----A--TAAATATTAAATAAATTTATTTTAAGAAACATTTT-------------------------------------------------------------------------TAT---AGTT----------------ATTAAT--------TTAAGT--------TT---------------TGAAATACAAAAAT-A---------------AACCAATTA-AACTTGCA---TACCTTGTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGA
droEre2 scaffold_4784:14507102-14507354 - TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAAT-TAGAAATTTGTATGTT---CAATTCGTGGTGTTAGAGAAA------TACATATATT---TTAACTGATCGTAAAGTG--CGA---------------------------------------------------------------------------------------------------------TTGTAAATTAAAT---------AAAT----------------TCAATTT-------------------------------------------------------------------------TGTAT-AATTTT--AAGTTTTAAGTT----------TAATTTTAAT---------T---------------TGGT--ACAAAAACAA---------------AACTAATTT-AACTTGCA---TCCGTTGTTCCAGCTACAATGACGAGCCCAACA---GAGCG------TCCCGCTACTGCCGGCCCCAAGTGA
droYak3 3L:14626159-14626439 - TGA---AAGATGGC----------------------CA--CCATCTGCTGATGTT-TAAATTTAGAA-TTTGTATTTT---CAATTAGTGATGTTAGAGAAA----------TATATT---TTAAATGATTGTAAAGTG--CAAATTGAAT-----ATCTTGCCGT----------------------------CTTTTTAAG------CAAAACTTATTTAATAGGAAATAATAGTAAAGAAAATGAATTATAA-------------------------------------------------------------------------------------------------------------------------------------------GTT----ATATGGTAATTTTAACATTTACATAT---------------TGGG--A-AA----AA---------------AACTAATTT-------TA---TAATTTTTTCCAGTTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGA
droEug1 scf7180000409456:770973-771230 - TGA---AAGATAGC----------------------TA--CCATCTGCTGATGTTTTAAATATAGAA-ATTATATTTTTTGCAA--AATGGTGTGAGGGAAA----------TTTATTTTTTTAACTGAATGTGAAGTG--CAAACTGAAA-----AGTTGATGGT----------------------------TGTTTTA------------------------------------AAAGAAATTC---T-----TTAAATA--A-----------ATATATT------------TTT----------------------------CT-------------------TCA--------------------------------------------------AT--------TTA-------------------------------AATACCA----AA---------------AACTAATTGCAATTTTCTCTCTCTGTACTTTCAGTTACAATGACGAGCCCAACA---GAGCT------TCTCGCTACTGTCGGCCCCAAGTGA
droBia1 scf7180000302428:5354895-5355079 + TGA---AAGATTGC----------------------GG--CCATCTGCTGATGTTTTAAGTATAGAA-ATTACATTTT---CAATCAGGGTTGACTAAA----AAATATAT---------------------------------------------TATTTATGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------AAGAAA-----------TA------------------------------------------------------------------------------TTAA---------CATTGAGA---------TTAATTG-A-CTTTC---CCCTGCCTTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGA
droTak1 scf7180000415135:217387-217618 - TGA---AAGATTGC----------------------GG--CCATCTGGTGATGCTTTAAATATAGAA-ATTATATTTT---CAATACGTGGCGTGAGATAAA----------CATTTT---AGAAATGATTTTGTA-----AAAATTAAAT--------------------------------------------------------TTTTAGAGTT--C--------------------------------TGAA----A--CAAATAGT----------------------------------------------------------------------------------------------------------ATTTA------------------AATA---------TGGT--------CAATAAAATATTTT-----------------------------------ATTAATTT-ATTTCTT---CTCTGCCTTTCCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGA
droEle1 scf7180000491199:1680667-1680936 - TGA---AAGATAGC----------------------TA--ACATCTGCTGATGTTCCGAATATAGAA-AGTATATATT---GAAACAGTGGGGTGAGAGAAA----------CATA-------------------------CGAATTGAATAAATTATTTTGCGGTATTATTCGTAATCTCT------------GTTGAAAAG------C---------------------------------ATC---------------------------------------------------------------------------------CT-------------------TCAAATAATAATAAGATTTATCCAATAT-TTTTAATAAATATAGA---------------TATTATT---------------A--------------AA--TAA----CG---------------AACTAATTG-GTTTTAA---TTCTGTAATTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGA
droRho1 scf7180000769828:1251-1543 - TGA---AAGATAGC----------------------TG--CCATCT---GATGTTCCGAATATAGAA-ATTTTATTTT---CACAAA---------GGGATA----------TATATT---TTAACTAAATGTAAAGTG--CAAACTGAAA-----G---------------------------------------------------------------------------------AATAAGCTC---G-----TTAAATT--A-----------ATTTATC------------TTATTCCATTAAAGTATTTTAAAATATAGAACTTCAAAATTTTGAAGTCAAAATAAAA-----------TTTTCAAAAATTATTCA------------------AAAA-----------TT--------GT---------------TGGGCTATAT----AA---------------AACTCATTT-ATTTTGG----TCTCTTATTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGA
droFic1 scf7180000453784:876647-876910 - TTG---AAGATAGC----------------------TG--CCACCTGCTGATTTTTCGTACACAGAA-ATTATATTTT---CAAT-AGCGGTGTGAAAAAATTAGAAAAAC--A-------------AATAA---------CGAACAAAG-----------------------------------------------------------------------------------AATTATTTGGATTAAA-------------------------------------------------------------------------------------ATTTTTAAAACAAATCAAAT-----------CTTTCAAATAT-ATTCAC--ATGATAGAAATT----------TTATTTTT---------------A--------------AA--TAA----TGTTTT-AAAAAGATGAAACTAACT------TTT---CTTTGTATTTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGA
droKik1 scf7180000302383:657713-657965 - ACG---------GA----------------------CA---CATCTGGTGATATTTTGTATTAATAA-ATTATATTTA--GCAACTGGAGGTTTTAGAGAT-------------------------TGAATTTATGTTT--CAA---------------------------------------------------------------TTTAAGACTT--CTTGTAGGATT----------------------------TATT---------AAAC----------------ACAAAAT-------------------------------------------------------------------------TAAAA-AGTTTT--TA-TTATAAGTTTACAATAT------CTTAGT--------CTTTAA-AAATTTTATTC-----GTTT----AA---------------AACTCACAT-ACT--TCC---CTCTCTTTTCCAGCTACAATGACGAGCCCAACC---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGA
droAna3 scaffold_13337:4551794-4551873 + A------------------------------------------TTTTCTTATTTT-TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTCAGCTATAATGACGAGCCCAACA---GACCGCTACCACCGCGCTACTACCGACCCCAAGTGA
droBip1 scf7180000395450:671113-671237 + ATA---TT-----------------------------------------------------------------------------------------------AAATATAT---------------------------------------------ATTTTACGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------TCAAAT-----------CT------------------------------------------------------------------------------TTTA---------TTTT-ATATTAATAAAATTTTTT------A-T---TCTTAAAATTTCAGTTATAATGAGGAGGCCAACA---GAACG------CCGCGCTACTACCGACCCCAAGTGA
dp5 XR_group6:7236962-7237019 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGCTTCAATGACGAACCCAATA---GAGCA------TCGCGCTACTGCCGTCCCCAAGTGA
droPer2 scaffold_41:590003-590060 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGCTTCAATGACGAACCCAATA---GAGCA------TCGCGCTACTGCCGTCCCCAAGTGA
droWil2 scf2_1100000004768:428279-428331 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTACAATGACGAAACAAATC---GAGCA------TCACGCTATTGCCGTCCCCAAGTGA
droVir3 scaffold_13049:16622320-16622378 - TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTACAATGACGAACCCAATACCATAGCC------TCGCGTTATTGCCGTCCTCAAGCGG
droMoj3 scaffold_6680:20093229-20093288 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGTTACAATGACGAGCCCAACAGCCTGAGT------GCGCGCTATTGCCGCCCTCAAGCCG
droGri2 scaffold_15110:16487151-16487257 + ATATATAATATGGATTTATATACTCATTTGTGCATCTGATCCGTCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCAGCTACAATGATGATCCAAATAGCATAGCA------TCACGCTATTGCCGTCCACAAGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGAAA----------TATATT---TTAACTGATTG---------CA-ACTGAA-----------------------------------------------------------------------------------TAGTAACGAAATTAAATTGTAAA----A---AAATATTAAAT----------------TCGTTTT-------------------------------------------------------------------------TAT---AGTT----------------TATAAT--------TTAAAT--------TT---------------TGGAATATAT----AG---------------AACTAATTT-AATTTGCA---TACGTTTTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCCCAACA---GAGCG------TCGCGCTA.................2512.00202000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG------TCGCGCTACTGCCGGC.........2011.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACGAGCCCAACA---GA..................................1811.00100001000000000000
TGA---AAGATGGC----------------------TA--CCATCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
droSec2
TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGAAA----------TATATT---TTAAATGATTG---------CAAACTAAA-----------------------------------------------------------------------------------TAGTAACGAAATTAAATTGTAAA----AAAAAAATATTAAAT----------------TCGTTTT-------------------------------------------------------------------------TAT---AGTT----------------TATAAT--------TTAAGT--------TT---------------TGGAATATAG----AG---------------AACTAATTT-AATTTGGA---TTCGTTGTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGACCCCAAGTCASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTT-AATTTGGA---TTCGTTGTTTCAG...........................................................2611.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................TATAAT--------TTAAGT--------TT---------------TGGAATATA...................................................................................................................2311.0010010
dm3
TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAATATAGAA-ATTATATTTT---CAATTAGTGGTGTTAGAGATA----------TATATT---TTAACTGATTGTGATATATTCAACC--------------TTCGATAT--------------TCAACCTTTTGATTTTTTGAACGAATTCAACACTCATTTAAAAGGACAGAATAGTAACGAAATTAAGTTATGAA----A--TAAATATTAAATAAATTTATTTTAAGAAACATTTT-------------------------------------------------------------------------TAT---AGTT----------------ATTAAT--------TTAAGT--------TT---------------TGAAATACAAAAAT-A---------------AACCAATTA-AACTTGCA---TACCTTGTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GAGCG------TCGCGCTACTGCCGGC.........2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCCCAACA---GAGCG------TCGCGCTAC................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCCCAACA---GAGCG------TCGCGC...................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GAGCG------TCGCGCTACTGCCGGCCCC......2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAGCCCAACA---GAGCG------TCG......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACA---GAGCG------TCGCGCTACTGCC............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACGAGCCCAACA---GAGC................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAACA---GAGCG------TCGCGCTACTG..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCCAACA---GAGCG------TCGC.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GC----------------------TA--CCATCTGCTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAGCCCAACA---GAGCG------TCG......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCA---TACCTTGTTTCAG...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG------TCGCGCTACTGCCG...........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAGCCCAACA---GAGCG------T........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACA---GAGCG------TCGCGCTACTGCCGGC.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCCGGCCCCAAGTGA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGACGAGCCCAACA---GAGC................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GAGCG------TCGCGCTAC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACGAGCCCAACA---GAGCG------TCGCG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GAGCG------TCGCGCTACTGCCGGCC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GAGCG------TCGCGCTACTGCC............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAACA---GAGCG------TCGCGCTACTGC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................TAAAAGGACAGAATAGTAACGAAATT................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACA---GAGCG------TCGCGCTA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAGCCCAACA---GAGCG------TC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAATGACGAGCCCAACA---GAGCG------TC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---GAGCG------TCGCGCTACTGCCGGCCCC......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACA---GAGCG------TCGCGCTACTGCCGG..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAGCCCAACA---GAGCG------TCGCGC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GAGCG------TCGCGCTACTGCC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACA---GAGCG------TCGCGCTACTG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCAACA---GAGCG------TCGCG....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GAGCG------TCGCGCTACTGCCGG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAACA---GAGCG------TCGCGCT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCCAACA---GAGCG------TCGCGC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG------TCGCGCTACTGCCGGCCCCAAGTGA2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACA---GAGCG------TCGCGCTACTGCCGC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACA---GAGCG------TCGCGCTACT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAGCCCAAC........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCAACA---GAGCG------TCGCGCTACT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAATGACGAGCCCAACA---....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAACA---GAGCG------TCGCG....................1911.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---GAGCG------TCGCGCTACT...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCCAACA---GAGCG------TCGCG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCG------TCGCGCTACTGCC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACA---GAGCG------TCGCGCTACTG..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCCAACA---GAGCG------TCGCGCTACT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droEre2
TGA---AAGATGGC----------------------TA--CCATCTGCTGATGTT-TAAAT-TAGAAATTTGTATGTT---CAATTCGTGGTGTTAGAGAAA------TACATATATT---TTAACTGATCGTAAAGTG--CGA---------------------------------------------------------------------------------------------------------TTGTAAATTAAAT---------AAAT----------------TCAATTT-------------------------------------------------------------------------TGTAT-AATTTT--AAGTTTTAAGTT----------TAATTTTAAT---------T---------------TGGT--ACAAAAACAA---------------AACTAATTT-AACTTGCA---TCCGTTGTTCCAGCTACAATGACGAGCCCAACA---GAGCG------TCCCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAATGACGAGCCCAACA---GAGCG------TCCC.....................2911.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAGCCCAACA---G...................................2011.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAATGACGAGCCCAACA---GAG.................................2311.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCAACA---GAGCG------TCCCGCTAC................2411.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACA---GAGCG------TCCCGC...................1911.0010000100
droYak3
TGA---AAGATGGC----------------------CA--CCATCTGCTGATGTT-TAAATTTAGAA-TTTGTATTTT---CAATTAGTGATGTTAGAGAAA----------TATATT---TTAAATGATTGTAAAGTG--CAAATTGAAT-----ATCTTGCCGT----------------------------CTTTTTAAG------CAAAACTTATTTAATAGGAAATAATAGTAAAGAAAATGAATTATAA-------------------------------------------------------------------------------------------------------------------------------------------GTT----ATATGGTAATTTTAACATTTACATAT---------------TGGG--A-AA----AA---------------AACTAATTT-------TA---TAATTTTTTCCAGTTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.........ATGGC----------------------CA--CCATCTGCTGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACA---GAGCG------TCGCGCTACTGCC............2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCCCAACA---GAGCG------TCGCGCTAC................2511.00100001000000
................................................................................................................................................ATTGAAT-----ATCTTGCCGT----------------------------CTTTTTAAG------.....................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...........................................................................TTT---CAATTAGTGATGTTAGAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................AGTGATGTTAGAGAAA----------TAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................................................................................................................................AAATTGAAT-----ATCTTGCCGT----------------------------....................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
TGA---AAGATAGC----------------------TA--CCATCTGCTGATGTTTTAAATATAGAA-ATTATATTTTTTGCAA--AATGGTGTGAGGGAAA----------TTTATTTTTTTAACTGAATGTGAAGTG--CAAACTGAAA-----AGTTGATGGT----------------------------TGTTTTA------------------------------------AAAGAAATTC---T-----TTAAATA--A-----------ATATATT------------TTT----------------------------CT-------------------TCA--------------------------------------------------AT--------TTA-------------------------------AATACCA----AA---------------AACTAATTGCAATTTTCTCTCTCTGTACTTTCAGTTACAATGACGAGCCCAACA---GAGCT------TCTCGCTACTGTCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droBia1
TGA---AAGATTGC----------------------GG--CCATCTGCTGATGTTTTAAGTATAGAA-ATTACATTTT---CAATCAGGGTTGACTAAA----AAATATAT---------------------------------------------TATTTATGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------AAGAAA-----------TA------------------------------------------------------------------------------TTAA---------CATTGAGA---------TTAATTG-A-CTTTC---CCCTGCCTTTTCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droTak1
TGA---AAGATTGC----------------------GG--CCATCTGGTGATGCTTTAAATATAGAA-ATTATATTTT---CAATACGTGGCGTGAGATAAA----------CATTTT---AGAAATGATTTTGTA-----AAAATTAAAT--------------------------------------------------------TTTTAGAGTT--C--------------------------------TGAA----A--CAAATAGT----------------------------------------------------------------------------------------------------------ATTTA------------------AATA---------TGGT--------CAATAAAATATTTT-----------------------------------ATTAATTT-ATTTCTT---CTCTGCCTTTCCAGCTACAATGACGAGCCCAACA---GAGCG------TCGCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droEle1
TGA---AAGATAGC----------------------TA--ACATCTGCTGATGTTCCGAATATAGAA-AGTATATATT---GAAACAGTGGGGTGAGAGAAA----------CATA-------------------------CGAATTGAATAAATTATTTTGCGGTATTATTCGTAATCTCT------------GTTGAAAAG------C---------------------------------ATC---------------------------------------------------------------------------------CT-------------------TCAAATAATAATAAGATTTATCCAATAT-TTTTAATAAATATAGA---------------TATTATT---------------A--------------AA--TAA----CG---------------AACTAATTG-GTTTTAA---TTCTGTAATTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droRho1
TGA---AAGATAGC----------------------TG--CCATCT---GATGTTCCGAATATAGAA-ATTTTATTTT---CACAAA---------GGGATA----------TATATT---TTAACTAAATGTAAAGTG--CAAACTGAAA-----G---------------------------------------------------------------------------------AATAAGCTC---G-----TTAAATT--A-----------ATTTATC------------TTATTCCATTAAAGTATTTTAAAATATAGAACTTCAAAATTTTGAAGTCAAAATAAAA-----------TTTTCAAAAATTATTCA------------------AAAA-----------TT--------GT---------------TGGGCTATAT----AA---------------AACTCATTT-ATTTTGG----TCTCTTATTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droFic1
TTG---AAGATAGC----------------------TG--CCACCTGCTGATTTTTCGTACACAGAA-ATTATATTTT---CAAT-AGCGGTGTGAAAAAATTAGAAAAAC--A-------------AATAA---------CGAACAAAG-----------------------------------------------------------------------------------AATTATTTGGATTAAA-------------------------------------------------------------------------------------ATTTTTAAAACAAATCAAAT-----------CTTTCAAATAT-ATTCAC--ATGATAGAAATT----------TTATTTTT---------------A--------------AA--TAA----TGTTTT-AAAAAGATGAAACTAACT------TTT---CTTTGTATTTTCAGTTACAATGACGAGCCCAACA---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droKik1
ACG---------GA----------------------CA---CATCTGGTGATATTTTGTATTAATAA-ATTATATTTA--GCAACTGGAGGTTTTAGAGAT-------------------------TGAATTTATGTTT--CAA---------------------------------------------------------------TTTAAGACTT--CTTGTAGGATT----------------------------TATT---------AAAC----------------ACAAAAT-------------------------------------------------------------------------TAAAA-AGTTTT--TA-TTATAAGTTTACAATAT------CTTAGT--------CTTTAA-AAATTTTATTC-----GTTT----AA---------------AACTCACAT-ACT--TCC---CTCTCTTTTCCAGCTACAATGACGAGCCCAACC---GAGCG------TCTCGCTACTGCCGGCCCCAAGTGASizeHit CountTotal NormTotal
No Reads
droAna3
A------------------------------------------TTTTCTTATTTT-TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTCAGCTATAATGACGAGCCCAACA---GACCGCTACCACCGCGCTACTACCGACCCCAAGTGASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACGAGCCCAACA---GACCGCTACC..........................2611.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---GACCGCTACCACCGCGCTACT...............2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAGCCCAACA---GACCGCTACCAC........................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCTACCACCGCGCTACT...............2111.001100000
droBip1
ATA---TT-----------------------------------------------------------------------------------------------AAATATAT---------------------------------------------ATTTTACGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------TCAAAT-----------CT------------------------------------------------------------------------------TTTA---------TTTT-ATATTAATAAAATTTTTT------A-T---TCTTAAAATTTCAGTTATAATGAGGAGGCCAACA---GAACG------CCGCGCTACTACCGACCCCAAGTGASizeHit CountTotal NormTotal
No Reads
dp5
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGCTTCAATGACGAACCCAATA---GAGCA------TCGCGCTACTGCCGTCCCCAAGTGASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---GAGCA------TCGCGCTACTGCCGTCCCC......2611.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA---GAGCA------TCGCGCTACTGCCGTCCCC......2711.0010001000000
droPer2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCAGCTTCAATGACGAACCCAATA---GAGCA------TCGCGCTACTGCCGTCCCCAAGTGASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------TCGCGCTACTGCCGTCCCCA.....2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCAATA---GAGCA------TCGCGCT..................2211.001001000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTACAATGACGAAACAAATC---GAGCA------TCACGCTATTGCCGTCCCCAAGTGASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGCCGTCCCCAAGTG.1911.00100001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTATTGCCGTCCCCAAGT..2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATC---GAGCA------TCACGCTATTGCC............2611.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGACGAAACAAATC---GAGCA------.........................2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCA------TCACGCTATTGCCGTCCC.......2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TCACGCTATTGCCGTCCCCAAGT..2411.00100010
droVir3
TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTACAATGACGAACCCAATACCATAGCC------TCGCGTTATTGCCGTCCTCAAGCGGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCATAGCC------TCGCGTTATTGCCGTC.........2611.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTGCCGTCCTCAAG...1811.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTTATTGCCGTCCTCA.....1911.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCC------TCGCGTTATTGCCGTCC........2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC------TCGCGTTATTGCCGTCC........2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCATAGCC------TCGCGTTA.................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATAGCC------TCGCGTTATTGCCGTCC........2611.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGTTACAATGACGAGCCCAACAGCCTGAGT------GCGCGCTATTGCCGCCCTCAAGCCGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCGCTATTGCCGCCCTCAA....2111.001100000
droGri2
ATATATAATATGGATTTATATACTCATTTGTGCATCTGATCCGTCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCAGCTACAATGATGATCCAAATAGCATAGCA------TCACGCTATTGCCGTCCACAAGCGGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATCCAAATAGCATA..................................2011.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAATAGCATAGCA------TCACG....................2211.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATCCAAATAGCATAGCA------TCACG....................2811.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGATGATCCAAATAGCA....................................2111.00101
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGATGATCCAAATAGCATA..................................2211.00101
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------TCACGCTATTGCCGTCC........2011.00101

Generated: 05/18/2015 at 11:22 PM