ID:

dsi_9104

 Coordinate:

x:9114406-9114585 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.5 -12.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TATAACCATCTCGCTTGCACGCACACTTGTACATCCGTACATCCGAACACCTGTACACCCATACACCTGTACACACGCCTGTGTTGTTGTGTTCCCTTTTTGGCTGCCATCTTCAAAATTCGCCCATAAATGAACTAAAATCGTAAACAAAAAACAAAATAAAAACAAACGCAATCGAACAATCGAACAAAAATCAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
***************************************************************************((..(((((((((.((((...((((((..(((...........((((........))))........)))..))))))....))))..))))).))))..))..................................********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.................................................................................................................................................................................................ACGACGGTCTAAAGGAATACG.................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AAGTGCTTTAACGACATCCAGGGC.......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GCTTTAACGACATCCAGGGC.......... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................AACAGTCTAAAGGAAT..................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................CATCCGTACATCCGAACACC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................CGCCTGTGTTGTTGTGTTCCC........................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................TGTTGTTGTGTTCCCTTTTT................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................GTTGTGTTCTCTTTTTGGCGCC............................................................................................................................................................................. 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
....................................................................................TGTTGTGTTCTCTTTGTGGCG............................................................................................................................................................................... 21 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................ACAAAAAACAAGATAAAA.................................................................................................................... 18 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0
.............................................GACACCTTTACACCCATAGA....................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................CAATCGAACCATCTAAAAAAA........................................................................................ 21 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0
....................................................................................TGTTGTGTTCTCTTTTTGGCGC.............................................................................................................................................................................. 22 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................AGTCTAAAGGCATAAGG................................................................. 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................GACCAATCGAACAAA......................................................................................... 15 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................CTGCCATCTTAAAAA.................................................................................................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................TCGTAAACAAAAAAAAAAA......................................................................................................................... 19 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ATATTGGTAGAGCGAACGTGCGTGTGAACATGTAGGCATGTAGGCTTGTGGACATGTGGGTATGTGGACATGTGTGCGGACACAACAACACAAGGGAAAAACCGACGGTAGAAGTTTTAAGCGGGTATTTACTTGATTTTAGCATTTGTTTTTTGTTTTATTTTTGTTTGCGTTAGCTTGTTAGCTTGTTTTTAGTTGTCAGATTTCCTTATGCCACAGCGGAGTTTATCTATGTGGATGACGGTTTTCACGAAATTGCTGTAGGTCCCGCTATGCCAGT
*********************************************************************((..(((((((((.((((...((((((..(((...........((((........))))........)))..))))))....))))..))))).))))..))..................................*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
........................................................................................................................................................TTGTTTTATCTTGGTTTGC............................................................................................................. 19 2 14 1.50 21 8 0 0 6 0 5 2 0
..........................................GGCTTGTGGACATGTGGGTA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................CAGGTAGGCTTGTGGACAT................................................................................................................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................CAGGACGGTTTTCACGAAAT........................ 20 2 2 0.50 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................CGGTTTTGAGGAAATTGC..................... 18 2 6 0.33 2 0 0 0 0 2 0 0 0
........................................................................................................................................................TTGTTTTATCTTGGTTTG.............................................................................................................. 18 2 20 0.20 4 3 0 0 0 0 0 1 0
.............................................................................................................................................................................CAGGTTGTTAGCTGGTTTTTA...................................................................................... 21 3 6 0.17 1 0 0 0 1 0 0 0 0
............................................................................................AGGGAAAAACCGACG............................................................................................................................................................................. 15 0 6 0.17 1 0 1 0 0 0 0 0 0
......................TGTGAACAGGTGGGCATTTA.............................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................GCCTTAGCTTGTTGGCT.............................................................................................. 17 2 17 0.12 2 0 0 0 0 2 0 0 0
....................................................................................................................................................................................................................................................................GTACGTGCCGCTGTGCCAG. 19 3 9 0.11 1 0 1 0 0 0 0 0 0
..............................TATAGCCAGGTAGGCTTGTGG..................................................................................................................................................................................................................................... 21 3 11 0.09 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................TGGTTGCGCTAGCTTGTGAG................................................................................................ 20 3 12 0.08 1 0 0 0 0 1 0 0 0
..........................................................GGTTTGTGGAGATGTGTGGG.......................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 1
............................................................................................................TAGAGGTCTTAAGCGGGTT......................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................ATTTTTTCTGGCGTTAGCT...................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................AGGACGGTTTTCACG............................ 15 1 20 0.05 1 0 0 1 0 0 0 0 0
...............................................................................................................................................ATTTGTTTTTTGTTT.......................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:9114356-9114635 - dsi_9104 TATAACCATCTCGCTT--GCACGC--------------------------------------ACACTTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGCCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATC----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droSec2 scaffold_15:332535-332805 - TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GTCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGCCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA----------------------------------------------------------------------------------------A----------ACAAAATA--AAAACA-AACGCAAT-----CGAA--------------------------------------------------CAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
dm3 chrX:9568878-9569157 - TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTT--------------TA--------CATTCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATC----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droEre2 scaffold_4690:5549173-5549459 + TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACTTGTACAC--------CTGTACACCC-----------------------ATACACCTGTA--CCTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-CAAATAAA--ATCG----TAAAC---------------AAA--------------------------------------------------------------------------------------AAA----------ACAAAATA--AAAACA-AACGCAAT-----CGAA--------------------------------------------------CAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droYak3 X:18159933-18160247 - dya_1468 TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC--------CTGTACACTC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-CAACTAAA--ATCG----TAAAC---------------AAAA-----------------------------------------------CA------AAACAAAAAAAACAAA-------AAAAAAAAAA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATT----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droEug1 scf7180000409032:352651-352930 + TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCG----TAAAAAA-AAAAAC------------------------------------------------------------------------------------------------AA----------ACAATATA---------AACGCAAT-----CGAACAACCAA----------------------------------------------AAATCAAAACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droBia1 scf7180000301760:5559301-5559615 - TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TACACCTGTACACCCGTACATCCGAACACCCGAACAC--------CTGTACACCC-----------------------ATACACCTGTACACCTGTACACAC----GCCTGT--GTTGTTGTGTTC-C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AC---------------CAAT-CAACTAAA--ATCG----AAAAAAACAAAAACAAAACCTAA---------------------------------------------------------------------------------------AA----------AC--TAT---AAAACA-AACGCAAT-----CGAACCACCAA------------------------------------------AAACAA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droTak1 scf7180000415872:203481-203786 - TATAACTATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACACCCGAATACCTGAACACCC---------------------ATATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---CTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT--------------------CAACTAAA--ATCG----TAAAAAATAA-------ACCAAA---------------------------------------------------------------------------------------AA----------ACAAAATA--TAAACA-AACGCAAT-----CGAACAACAAA------------AAA---A-------------------AA--AC--AA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droEle1 scf7180000491013:397508-397807 - TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CA--------TCCGAACACCTGTACAC----------------CC-----------------------ATACACCTGT----CTGTACACAC----GCCTGT--GTTGTTGTGTTCCCCTTTTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCGAATA-AAAC---------------AAA--------------------------------------------------------------------------------------AAA----------ACAAAATA--AAAACAAAACGCATTGAAAACGAACTACCAA------------AAAAAAC-------------CA-AC-AA--AC--AA-----AACATCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droRho1 scf7180000780080:516369-516661 + TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CA--------TCCGAACACCTGTACAC----------------CC-----------------------ATACACCTGT----CTGTACACAC----GCCTGT--GTTGTTATGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCAAATC-AAAC---------------C-----------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCATTGAAAACGAACAACCAA------------AAA---AC------------CA-CC-AA--ACAAAA-----CACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droFic1 scf7180000454073:2500435-2500726 - TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC--------CTGAACACCC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCGAAA----TTTCGTCC----AT--------------------CAACTAAA------------------------------------------------------------------------------------------------------------------------AA----------ACAAAATACAAAAATAAAACGCATTGCAAACGAATTACGAA------------AAA---TC------------AA-CC-AT--ACAAAA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACATACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droKik1 scf7180000302592:712477-712828 + TATAACCATCTCGCTT--GCACGC--------------------------------------ACACC-------------------------------------------ACCTGTACGC--------CACGACACACACTCAACCAACCATATCTCCCAAAAAC------------ACACACAC----GCCTGG--CC---TGTGCTCCC----TTTTGGCTGCC------------------------------------------ATCTTCAAAT-----ATTGTCCACACATCTCATTTCTGGCCATCAAT----CTAAA--AACG----AAAAC---------------AAAAATCACAAATCAAAACGCAAAAACCAAACAATTAAATAATTAAAAAAACA------AAACA-------------------AAAAAAAAA----------ACAAAAAA-------------C-------------------------AATCAAAATAATT-------------AA-AC-A--AATG--------AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droAna3 scaffold_13248:1375373-1375709 - dan_1515 TATAATCAAAACGCTT--GCACGCAAAAAAAAAAAAAAAACAAAAAAATCAAAAAAAAAAC-ACACCTGAA-AACACTATT-------------------------------TTTTAC-------------------------------------------ACACAC--------CTGTACACAT----GCCTGT--GTTGTTGT--T------ACTTTGGTTGCCAAAAAATCAACTCAAAAACATAAAAATCCACAAACACTAAAC-AATTA-------------TCC-------------------AAA-------------------------AA---------------AAAA-----------------------------------------------CAT--AAAAAACAAAC--------------------------------AA----------------A-AACGC---------GAACAA----ATCA-------AAACATAA-AAACATAAATTCGAAATA----AAAAAA-----AACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
droBip1 scf7180000396571:231166-231474 + CACA-----CTCGCTT--GCACGCATAAAAAAAAA-----CA----------------AAAAACACCTGAAAAACACTACT-----------------------------------AC--------------------------------------------TACAC--------CTGTACACAT----GCCTGT--GTTGTTGT--T------ACTTTGGTTGCC------------------------------------------AAATTA-------------TCC-------------------AAA-------------------------AC---------------AAAA-----------------------------------------------CACACACAAAACAAACACAACAAACATTCAACAAAAAAAAAACAACTAAA----------------A-AACGC---------GAACAA----ATCAACAATTAAAATATCA-AAACATAAATTCGAAATAAAAAATG--------AACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCA
dp5 XL_group3a:794061-794366 - GATGACCATCTCGCTCTCGCACCCACCACAACCCA-----TACCACAATCTGCAACCTGCCAACACTTGAC-AACACTACTCG-----------------------------------------------------CC-----------------------ACATGCCTGC----TCGTTCATTCGTTCGTTCGTTCGTTGTTGT--T--C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAAACTCTCTCGTAC----ATCGCATCC------AACAACAAAACTAAATCTTCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA---------CG-TA----------------------------AACA----AAA--AAAACCAAA-----------------------------ACAA--------AAACCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTTCTGCCAAAAGTGCTTTAATGACATCCAGGGAGACACGGTCA
droPer2 scaffold_15:2103103-2103409 + GATGACCATCTCGCTCTCGCACCCACCACAACCCATACCATACCACAATCTGCAACCTGCCAACACTTGAC-AACACTACTCG-----------------------------------------------------CC-----------------------ACTTGCCTGC----TCGTTCATTC----GTTCGTTCGTTGTTGT--T--C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAAACTCTCTCGTAC----ATCGCATCC------AACAACAAAACTAAATCTTCG----TAAAC---------------AAA--------------------------------------------------------------------------------------------------------------------AACGT---------GAACAA----AA--AAAACCAAA-----------------------------ACAA--------AAACCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTTCTGCCAAAAGTGCTTTAATGACATCCAGGGAGACACGGTCA
droWil2 scf2_1100000004909:3429687-3429948 + TAAAATCATCTCGCGCT-GCTTGT-------------------------------------------TGCAC-ACACCAA---CA--------CACACA------------------CAC----------------AC---------------------ACTCACAC--------TTATTCACAT----T----TTAAT--TTATGTTTTT---CATTGGAAAATC------------------------------------------ATCATCAACC-----AAAATCC----AT---------------CAAT----ACAAA--ATCA----CACAC---------------AAA---------------------------------------------------------------------------------------AA---------AA-TA-----------------AACTGAAAAAA---------------AAACAAAAAAAAT-------------AT-AT-A---A-ATATAT-----ACACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGACACTGTCA
droVir3 scaffold_12970:1113365-1113460 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAT---CACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGACACTGTAA
droMoj3 scaffold_6473:16091214-16091312 - AATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------CAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGATACTGTTA
droGri2 scaffold_15203:11939032-11939127 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAT---CACAACAGTTTAAAGGAATACGGTGTTGCCTCAAACAGATACACGTTCTGCCAAAAGTGCTTTAATGACATCCAAGGAGACACTGTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACTTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGCCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATC----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTTTAACGACATCCAGGGC..........2411.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTAACGACATCCAGGGC..........2011.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTCTAAAGGAAT.....................................................................1611.00100000010000000000
.............................................................................................CATCCGTACATCCGAACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................................C----GCCTGT--GTTGTTGTGTTCCC---........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................T--GTTGTTGTGTTCCC---TTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
droSec2
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GTCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGCCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA----------------------------------------------------------------------------------------A----------ACAAAATA--AAAACA-AACGCAAT-----CGAA--------------------------------------------------CAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTCTAAAGGAATACGGTGTC.............................................................2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTCGCC..........................................................2011.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAATACGGTGTCGCCT.........................................................2211.0010010
dm3
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTT--------------TA--------CATTCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-GAACTAAA--ATCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATC----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGAATACGGTGTCGCCTC........................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATACGGTGTCGCCTCAAATAGA.................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATACGGTGTCGCCTCA.......................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCTAAAGGAATACGGTGTCGC...........................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATACGGTGTCGCCTCAAAT....................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTACTGCCAAAAGTGCTTTAAC......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGACATCCAGGGCGATACGGT..2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCAGGGCGATACGGTC.2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATACGGTGTCGCCTC........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCCAAAAGTGCTTTAACGACATC................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGAATACGGTGTCGCCT.........................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTCGCCTCAAA.....................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATACGGTGTCGCCTCAAA.....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGACATCCAGGGCGATACGGTC.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCTACTGCCAAAAGTGCTT..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTCGCCTCAAATAG..................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AACGCAAT-----CGAACAATC----------------------------------GA--------ACAA...............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGGTGTCGCCTCAA......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGATACACCTACTGCCAAAAG...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTCGCCTCAAATA...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--AAAACA-AACGCAAT-----CGAACAATC----------------------------------GA--------...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----CGAACAATC----------------------------------GA--------ACAAAAAT-----C.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-----CAACAGTCTAAAGGAATA....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGATACACCTACTGCCAAAAGTG.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTCGCCTCAAATAGAT................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTCGCCTC........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGGTGTCGCCTCAAATAGATA...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................C------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------A......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAATACGGTGTCGC...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTTAACGACATCCAGGGCG.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACCTACTGCCAAAAGTGCTTTAAC......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAATC----------------------------------GA--------ACAAAAAT-----CAACAG................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGAATACGGT................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAGGAATACGGTGTCGCCTCA.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCT..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAAAGGAATACGGTGTCGCCTCA.......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-AACGCAAT-----CGAACAATC----------------------------------G............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTAAAGGAATACGGTGT..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTGCCAAAAGTGCTTT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATACGGTGTCGCCTCAAATAGAT................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCCAAAAGTGCTTTA........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCTAAAGGAATACGGTGT..............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GTTGTTGTGTTCCC---TTTTTGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACACCTACTGCCAAAAGTG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTGTCGCCTCAAATAGA.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................CGTACATCCGAACACCTGTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTTTAACGACATCCAGGGCGA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACGGTGTCGCCTCAAA.....................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGTGTCGCCTCAAATAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAGGAATACGGTGTCGCCT.........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTAAAGGAATACGGTGTCGCCTCA.......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTCGCCTCAAATAGA.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGTGTCGCCTCAAAT....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCAAAAGTGCTTTAACG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGTGCTTTAACGAC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTCTAAAGGAATACGGTGT..............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACTTGTACAC--------CTGTACACCC-----------------------ATACACCTGTA--CCTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-CAAATAAA--ATCG----TAAAC---------------AAA--------------------------------------------------------------------------------------AAA----------ACAAAATA--AAAACA-AACGCAAT-----CGAA--------------------------------------------------CAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTCGCCTCAAATAG..................................................1911.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTTTAACGACATCCAGGGCGATAC.....2911.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGATACACCTACTGCCAAAAGTGC............................2711.0010100000
.....................CGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
droYak3
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC--------CTGTACACTC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAA-----TTCGTCC----AT---------------AAAT-CAACTAAA--ATCG----TAAAC---------------AAAA-----------------------------------------------CA------AAACAAAAAAAACAAA-------AAAAAAAAAA----------ACAAAATA--AAAACA-AACGCAAT-----CGAACAATT----------------------------------GA--------ACAAAAAT-----CAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATACGGTGTCGCCTCAAAT....................................................25112.0012000000000012
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTAAAGGAATACGGTGTCGCC..........................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGACATCCAGGGC..........1811.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----CAACAGTCTAAAGGAATACGGTGTC.............................................................2711.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTAAAGGAATACGGTGTCGCCTC........................................................2711.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCTAAAGGAATACGGTGTCGCCTCA.......................................................2911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAAAAAAACAAA-------AAAAAA....................................................................................................................................................................................................2270.14100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAACAAA-------AAAAAAAAAA----------A.....................................................................................................................................................................................23160.06101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAACAAA-------AAAAAAAAAA----------......................................................................................................................................................................................22200.05101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACAAA-------AAAAAAAAA.................................................................................................................................................................................................19200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAACAAA-------AAAAAAAAA.................................................................................................................................................................................................21200.05101000000000
droEug1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC----------------CC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCG----TAAAAAA-AAAAAC------------------------------------------------------------------------------------------------AA----------ACAATATA---------AACGCAAT-----CGAACAACCAA----------------------------------------------AAATCAAAACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droBia1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TACACCTGTACACCCGTACATCCGAACACCCGAACAC--------CTGTACACCC-----------------------ATACACCTGTACACCTGTACACAC----GCCTGT--GTTGTTGTGTTC-C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AC---------------CAAT-CAACTAAA--ATCG----AAAAAAACAAAAACAAAACCTAA---------------------------------------------------------------------------------------AA----------AC--TAT---AAAACA-AACGCAAT-----CGAACCACCAA------------------------------------------AAACAA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droTak1
TATAACTATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACACCCGAATACCTGAACACCC---------------------ATATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---CTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT--------------------CAACTAAA--ATCG----TAAAAAATAA-------ACCAAA---------------------------------------------------------------------------------------AA----------ACAAAATA--TAAACA-AACGCAAT-----CGAACAACAAA------------AAA---A-------------------AA--AC--AA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droEle1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CA--------TCCGAACACCTGTACAC----------------CC-----------------------ATACACCTGT----CTGTACACAC----GCCTGT--GTTGTTGTGTTCCCCTTTTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCGAATA-AAAC---------------AAA--------------------------------------------------------------------------------------AAA----------ACAAAATA--AAAACAAAACGCATTGAAAACGAACTACCAA------------AAAAAAC-------------CA-AC-AA--AC--AA-----AACATCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droRho1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CA--------TCCGAACACCTGTACAC----------------CC-----------------------ATACACCTGT----CTGTACACAC----GCCTGT--GTTGTTATGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCAAAT-----TTCGTCC----AT---------------CAAT-CAACTAAA--ATCAAATC-AAAC---------------C-----------------------------------------------------------------------------------------AA----------ACAAAATA--AAAACA-AACGCATTGAAAACGAACAACCAA------------AAA---AC------------CA-CC-AA--ACAAAA-----CACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droFic1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACCTG--------------TA--------CATCCGTACATCCGAACACCTGTACAC--------CTGAACACCC-----------------------ATACAC--------CTGTACACAC----GCCTGT--GTTGTTGTGTTCCC---TTTTTGGCTGCC------------------------------------------ATCTTCGAAA----TTTCGTCC----AT--------------------CAACTAAA------------------------------------------------------------------------------------------------------------------------AA----------ACAAAATACAAAAATAAAACGCATTGCAAACGAATTACGAA------------AAA---TC------------AA-CC-AT--ACAAAA-----AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACATACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droKik1
TATAACCATCTCGCTT--GCACGC--------------------------------------ACACC-------------------------------------------ACCTGTACGC--------CACGACACACACTCAACCAACCATATCTCCCAAAAAC------------ACACACAC----GCCTGG--CC---TGTGCTCCC----TTTTGGCTGCC------------------------------------------ATCTTCAAAT-----ATTGTCCACACATCTCATTTCTGGCCATCAAT----CTAAA--AACG----AAAAC---------------AAAAATCACAAATCAAAACGCAAAAACCAAACAATTAAATAATTAAAAAAACA------AAACA-------------------AAAAAAAAA----------ACAAAAAA-------------C-------------------------AATCAAAATAATT-------------AA-AC-A--AATG--------AACAACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
droAna3
TATAATCAAAACGCTT--GCACGCAAAAAAAAAAAAAAAACAAAAAAATCAAAAAAAAAAC-ACACCTGAA-AACACTATT-------------------------------TTTTAC-------------------------------------------ACACAC--------CTGTACACAT----GCCTGT--GTTGTTGT--T------ACTTTGGTTGCCAAAAAATCAACTCAAAAACATAAAAATCCACAAACACTAAAC-AATTA-------------TCC-------------------AAA-------------------------AA---------------AAAA-----------------------------------------------CAT--AAAAAACAAAC--------------------------------AA----------------A-AACGC---------GAACAA----ATCA-------AAACATAA-AAACATAAATTCGAAATA----AAAAAA-----AACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACGACATCCAGGGC..........1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAATACGGTGTTGCC..........................................................2111.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTCAAATAGATACACCTACTGCC....................................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGCTTTAACGACATCCAGGGC..........2411.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCTCAAATAGATACACCTAC........................................2411.001010000
...............................AAAAAAAAACAAAAAAATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
..........................................AAAAAATCAAAAAAAAAAC-ACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201010000
droBip1
CACA-----CTCGCTT--GCACGCATAAAAAAAAA-----CA----------------AAAAACACCTGAAAAACACTACT-----------------------------------AC--------------------------------------------TACAC--------CTGTACACAT----GCCTGT--GTTGTTGT--T------ACTTTGGTTGCC------------------------------------------AAATTA-------------TCC-------------------AAA-------------------------AC---------------AAAA-----------------------------------------------CACACACAAAACAAACACAACAAACATTCAACAAAAAAAAAACAACTAAA----------------A-AACGC---------GAACAA----ATCAACAATTAAAATATCA-AAACATAAATTCGAAATAAAAAATG--------AACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACCTACTGCCAAAAGTGCTTTAACGACATCCAGGGCGATACGGTCASizeHit CountTotal NormTotal
No Reads
dp5
GATGACCATCTCGCTCTCGCACCCACCACAACCCA-----TACCACAATCTGCAACCTGCCAACACTTGAC-AACACTACTCG-----------------------------------------------------CC-----------------------ACATGCCTGC----TCGTTCATTCGTTCGTTCGTTCGTTGTTGT--T--C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAAACTCTCTCGTAC----ATCGCATCC------AACAACAAAACTAAATCTTCG----TAAAC---------------AAA---------------------------------------------------------------------------------------AA---------CG-TA----------------------------AACA----AAA--AAAACCAAA-----------------------------ACAA--------AAACCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTTCTGCCAAAAGTGCTTTAATGACATCCAGGGAGACACGGTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCTCAAATAGATACACCTTCT.......................................2511.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTAATGACATCCAGGGA..........2211.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCCAGGGAGACACGGT..2011.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTCGCC..........................................................2011.0010100000000
...........................................................................ACTACTCG-----------------------------------------------------CC-----------------------ACATGCCTGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GATGACCATCTCGCTCTCGCACCCACCACAACCCATACCATACCACAATCTGCAACCTGCCAACACTTGAC-AACACTACTCG-----------------------------------------------------CC-----------------------ACTTGCCTGC----TCGTTCATTC----GTTCGTTCGTTGTTGT--T--C---TTTTTGGCTGCC------------------------------------------ATCTTCAAAAACTCTCTCGTAC----ATCGCATCC------AACAACAAAACTAAATCTTCG----TAAAC---------------AAA--------------------------------------------------------------------------------------------------------------------AACGT---------GAACAA----AA--AAAACCAAA-----------------------------ACAA--------AAACCAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACCTTCTGCCAAAAGTGCTTTAATGACATCCAGGGAGACACGGTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAAAATCATCTCGCGCT-GCTTGT-------------------------------------------TGCAC-ACACCAA---CA--------CACACA------------------CAC----------------AC---------------------ACTCACAC--------TTATTCACAT----T----TTAAT--TTATGTTTTT---CATTGGAAAATC------------------------------------------ATCATCAACC-----AAAATCC----AT---------------CAAT----ACAAA--ATCA----CACAC---------------AAA---------------------------------------------------------------------------------------AA---------AA-TA-----------------AACTGAAAAAA---------------AAACAAAAAAAAT-------------AT-AT-A---A-ATATAT-----ACACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGACACTGTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGCTTTAATGACATACAAGGA..........2611.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGAATACGGTGTTG............................................................2211.00100100
...AATCATCTCGCGCT-GCTTGT-------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATACAAGGAGACACTGT..2011.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAAAGGAATACGGTGTTGCCTCAA......................................................2711.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGATACACGTTCTGCCAAAA................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAAAA---------------AAACAAAAAG.............................................................................................................................19200.05100010
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAT---CACAACAGTCTAAAGGAATACGGTGTTGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGACACTGTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTTGCCT.........................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATACGGTGTTGCCTCAAA.....................................................2411.001000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGAATACGGTGT..............................................................2011.001000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTAATGACATACAAGG...........1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTTGCCTCAAATAG..................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTCTGCCAAAAGTGC............................1811.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGAATACGGTGTTGCCTCAAATAG..................................................2811.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
AATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---------------CAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCACAGTCTAAAGGAATACGGTGTCGCCTCAAATAGATACACGTTCTGCCAAAAGTGCTTTAATGACATACAAGGAGATACTGTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACACGTTCTGCCAAAAG...............................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACGGTGTCGCCTCA.......................................................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCTCAAATAGATACACGTT.........................................2311.001000001
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAAAT---CACAACAGTTTAAAGGAATACGGTGTTGCCTCAAACAGATACACGTTCTGCCAAAAGTGCTTTAATGACATCCAAGGAGACACTGTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGACATCCAAGGAGACACTG...2311.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACATCCAAGGAGACA......1911.00101
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAAAGGAATACGGTGTTG............................................................2111.00101

Generated: 05/19/2015 at 12:40 AM