ID:

dsi_905

 Coordinate:

2l:3724141-3724290 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.2 -22.1 -22.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-

Sense Strand Reads

CCGGGGCAACAATCTCCACGAGGTGGAGACCGTGGACGAAACGTTCCTTGGTGAGTGGAGAATAAAGTTAAGGAAAACATCACGGTTGTCAGGCAAAGTTTGATTTATTTTGTAACTTTTGGAGCTAAACCCGGGATTTACTAGATTCCTTGTAAAGTATGTCACAGGCAGAAGGAAGCGATGGAACCATACCAAGTATATATATTCTTGATCAGGATAAATATCCAAATCGATCTGGCCATGTCCGTCC
**************************************************((((((....................)).))))(((.(((((((...)))))))..((((.((((.((((((........)))))).)))).))))(((((((......((((...)))).......)))).))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
........................................................................................................................................................TAAAGTATGTCACAGGCAGAAGGA.......................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................GGCAGAAGGAAGCGATGGAACC.............................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................TGGAGACCGTGGACGAAACGTTCC........................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................TGGAGACCGTGGACGAAACGTTCCTT......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
........................................................................................................................................................TAAAGTATGTCACAGGCAGAAGGAAGCGA..................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................GTATATATATTCTTGATCAGGAT................................ 23 0 20 0.75 15 0 0 0 0 0 15 0 0
...................................................................................................................................................................................................GTATATATATTCTTGATCAGGATA............................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GTATATATATTCTTGATCAGGATAAAT............................ 27 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................GACGGTTGTCAGGGAAAG........................................................................................................................................................ 18 2 3 0.33 1 0 0 0 0 0 0 0 1
........................................................................................................................................................TAAAGTATGTCACAGGTAGAAGGAA......................................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................TATATATATTCTTGATCAGGATAAATA........................... 27 0 3 0.33 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................TATGTCACAGGCAGA.............................................................................. 15 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................................GTCACAGGCAGAAGG........................................................................... 15 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ATCGATCTGGCCATGTCCGTC. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................AAAGTATGTCACAGGCAGAAGGAA......................................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................TGTATATTCTTGATCAGGGTAATTATC......................... 27 3 4 0.25 1 0 0 0 0 0 0 1 0
..............................................................................................................................................AGATTCCTAGTAAAGT............................................................................................ 16 1 5 0.20 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................TATGTTACAGGCAGAAGGAAGCGA..................................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................AAGTATATATGTTCTTGATCAGGATA............................... 26 1 7 0.14 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................GGCAGAAGGAAGCGA..................................................................... 15 0 7 0.14 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTATATATATTCTTGATCAGGACA............................... 24 1 9 0.11 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................ATATATATTATTGATCAGGATA............................... 22 1 9 0.11 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................ATATATATTATTGATCAGCATAAAT............................ 25 2 10 0.10 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................GTATATATATTCTTGATCAGGATAC.............................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ATATATATTCTTGATCGGGATAA.............................. 23 1 11 0.09 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGATATTCTTGATCAGGATA............................... 21 1 14 0.07 1 1 0 0 0 0 0 0 0
................................................................AAGCTAAGGAAAACAT.......................................................................................................................................................................... 16 1 16 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATATTCTTGATCAGGATA............................... 18 0 16 0.06 1 1 0 0 0 0 0 0 0
..........................................................................AAACATCACGGTCGCCA............................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................AGGTATATATATTCTTGATCAGGATA............................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GAATATATATTATTGATCAGGATA............................... 24 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

GGCCCCGTTGTTAGAGGTGCTCCACCTCTGGCACCTGCTTTGCAAGGAACCACTCACCTCTTATTTCAATTCCTTTTGTAGTGCCAACAGTCCGTTTCAAACTAAATAAAACATTGAAAACCTCGATTTGGGCCCTAAATGATCTAAGGAACATTTCATACAGTGTCCGTCTTCCTTCGCTACCTTGGTATGGTTCATATATATAAGAACTAGTCCTATTTATAGGTTTAGCTAGACCGGTACAGGCAGG
**************************************************((((((....................)).))))(((.(((((((...)))))))..((((.((((.((((((........)))))).)))).))))(((((((......((((...)))).......)))).))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
........................................................................................................................................AAATGATCTGAGGAACC................................................................................................. 17 2 20 3.05 61 61 0 0 0 0 0 0 0
.........................................................................................................................................................TTTCATACAGTGTCCGTCTTCCT.......................................................................... 23 0 3 2.00 6 0 5 1 0 0 0 0 0
........................................................................................................................................AAATGATCTGAGGAAC.................................................................................................. 16 1 5 1.20 6 6 0 0 0 0 0 0 0
..................................................................CAATTCCTTTTGTAGTGCCAA................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................TGGCTCATATATATAAGAACTAGTCT.................................. 26 2 1 1.00 1 0 0 0 1 0 0 0 0
.................TGCTGCACGTCTGGAACCTGCT................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................ATTTCATACAGTGTCCGTCTTCCT.......................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................AATGATCTGAGGAAC.................................................................................................. 15 1 6 0.83 5 5 0 0 0 0 0 0 0
........................................................................................................................................AAATGATCTGAGGAA................................................................................................... 15 1 9 0.67 6 6 0 0 0 0 0 0 0
........................................................................................................................................................AATTCATACAGTGTCCGTCTTCCTTG........................................................................ 26 2 2 0.50 1 0 1 0 0 0 0 0 0
.......................................................................................................................................TAAATGATCTGAGGAACC................................................................................................. 18 2 7 0.43 3 3 0 0 0 0 0 0 0
.............................................................................................................................................................ATACAGTGTCCGTCTTC............................................................................ 17 0 3 0.33 1 0 0 0 0 0 1 0 0
............................................................................................................................................................CATACAGTGTCCGTCT.............................................................................. 16 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................CGTAAATGATCTGAGGAACC................................................................................................. 20 3 10 0.30 3 3 0 0 0 0 0 0 0
.................................................................................................................................................AAAAAAAATTTCATACAGTGTCCGTC............................................................................... 26 3 4 0.25 1 0 1 0 0 0 0 0 0
..................................................................................................................................AGCGCTAAATGATCTGAGGA.................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................................................ATTTCTTACAATGTCCGTCTTCCTT......................................................................... 25 2 5 0.20 1 0 0 0 1 0 0 0 0
.......................................................................................................................ACCACGCTTTGGGCCCT.................................................................................................................. 17 2 7 0.14 1 0 0 0 0 0 1 0 0
........................................................................................................................................AAATGATCTAAGGAACTTTTCATACA........................................................................................ 26 1 7 0.14 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................TGTCCGTCTTCCTTCGCT..................................................................... 18 0 7 0.14 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................TTTAGCTAGACCAGTACAGGCAT. 23 2 8 0.13 1 0 0 0 0 0 0 0 1
........................................................................................................................................AAATGATCTGAGGAACG................................................................................................. 17 2 8 0.13 1 1 0 0 0 0 0 0 0
.......................................................................................................................................TAAATGATCTGAGGA.................................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................................................................................CGTAAATGATCTGAGGA.................................................................................................... 17 2 8 0.13 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATCTTTAGCTAGATCGGTACAGGC... 25 3 8 0.13 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTCATATATATAAGAACTAGTCCT................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TATAGCTAGACCAGTACAGGCAT. 23 3 11 0.09 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................TTTTAGCTAGACCAGTACAGGCAT. 24 3 12 0.08 1 1 0 0 0 0 0 0 0
......................................................................................................................................GTAAATGATCTGAGGAA................................................................................................... 17 2 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGAACTAGTCCTATTT............................. 16 0 15 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................GATTCATATATATAAGAACTAGTCCT................................. 26 1 17 0.06 1 0 0 0 0 0 0 1 0
...................................................................................................................................GGCGTAAATGATCTGAGGA.................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGCTAGACCGGTACAGGC... 18 0 20 0.05 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................GAACTAGTCCTATTTCT........................... 17 1 20 0.05 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................AGAACTAGTCCTATTTCT........................... 18 1 20 0.05 1 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................AAAGAACTAGTCCTATTTCT........................... 20 2 20 0.05 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................ATATAAAAGGACTAGTCCTATTTC............................ 24 3 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3724091-3724340 - dsi_905 CCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGA-GAATAAAG-TTAAGGAAAACATCACGGT----------------------------------TGTCAGGC---AAAGTT---------------------------------------------------------------------------------TG--AT---------------------------------TTATTTTGT-AACTTTTGGAGCTA-------------------------A----------------------ACC------CGGGATTTACTAGATTCCTTGTAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGTATATATATTCTTGATCAGGATAAATATCCAAATCGATCTGGCCATGTCCGTCC
droSec2 scaffold_5:1974058-1974307 - CCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGA-GAATAACG-TAGAGGAAAACTCCACGGT----------------------------------TGTCAGGC---AAAATT---------------------------------------------------------------------------------TT--AT---------------------------------TTATTTTGG-AACTTTTGGAGCTA-------------------------A----------------------ACC------CGGGATTTACTAGATTCCTTTTAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGTATATAAATTCTTGATCAGGATCAATATCCGAATCGATCTGGCCATGTCCGTCT
dm3 chr2L:3871993-3872222 - TCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGATGAATAAAG-TCGAGGAAAACTCCATGGT----------------------------------T-----------------------------------------------------------------------------------------------------AG---------------------------------TTAATTTTG-AACT-----AGCTA-------------------------T-----------------T-----G-------CCGGGTATACTAGATTTTTTGAAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGCATATATATTCTTGAACAGGATCAATATCCCAATCGATCTGGCCATGTCCTTCC
droEre2 scaffold_4784:22746685-22746891 + ACC----A------TGGCC-AAAATAA-ATA--G-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCAAG-TTGCGGAACAA-------------------ATTAGTTTC-----------------------------------------------------------------------------------------------------GGGG-------------------------------------------CTC----------AAC-----TATT-------------------------TATACCA-------GTTACTT--GT--AGAGTAAATGGATATTCTTGATTCTTTGAAA-------AGTATGTAACAGGCAAAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCAATCTGGCCATGTCCGTCT
droYak3 v2_chrUn_008:144676-144912 + ACA------------ATTT-ATACTAGAGCATAT-AA----------CGTGAAC------ATTAGATTCC---------------------T--------------------------------------------------------------------------------------------TGATAAGAAG--TAACAAGC-AGGAGAAAGCCATTAC--------------------------------------------------------------------GTTGAC-------------------------------------------------------------------------AAGG-C------------------C------------GCT-----CTTG-------------------------CATACCC-------GTTACTC--GT--AGAGTAAAAGGGTATACAAGATTCGTTAAAA-------AGTATGTAACAGGCAGAAGAAAGCGTTTTCAACCATATAAAGTATATATATACTTGATCAGGATCAATAGCCGAATCGATCTGGCCATGTCCGTCT
droEug1 scf7180000409030:25893-26161 - GTG----CCGTAACATTCTCTTACAAG-ATGTTT-A-----CAAATCAG--------------------------------------------------------------------------------------------ATGCA-------------------------------------------------------------------------------------------------------------------------------TGCGTGTGAAGTGACC----------TTTTATTAGGGGTGAAATTAGTTAGTA-----------------ATGGGA-------------------------------------------AAC----------AA------TGATTATACGCAAAACCACAACCTCTTTTTATACCC-------GTTACTC--GT--AGAGTAAAAGGGTACACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCGTTTGCGACCCTATAAAGTATATACATTCTTGATCAGGATCAATAGCGAAATCGATTAAGCCATGTCCGTCT
droBia1 scf7180000301236:3447-3697 + CCC----TGGCAAAAGTCT-CGACGAG-ATCGGGAATCCTAAAAATTAGTGTACCAGCACG--GAGTTCA---------------------T--------------------------------------------------------------------------------------------TGAGGTGGGGAAGAGTGCTA-----------------------------------------------------------------------------------------------------------------------GC-----------------GG-GGGAAAGAATTT-TGGTCG----------------------------------TTAT---CAT-----ATTT-------------------------TTTACCC-------GTTACGC--GT--G------AAAGGTATACTAGTTTCGTCGGAA-------AGTATGCAACAGGTAGAAGGAATCGA--CCGACCCCATAAAGTGAATATATTTTTGATCAGGATCACTAGCCGAGTCGATCTAGGCATGTTCGTCT
droTak1 scf7180000415074:3459-3686 - GGG-------CAAAAATTT-CTAAAAA-GTAGG----------------------------AAATTTTCC------------------------------------------------------------------------------------------------------------------TAAAAAATAGA-AATTAAAAACAAAACAAAAAAACATGTT----------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------AATCATGATTTT-------------------------TATACCC-------GTTACTC--GT--AGAGTAAAAGGGTATATTAGATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCGGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCT
droEle1 scf7180000490085:28481-28732 + AAA----G-------ATTT-ATACATA-GTGACG-AC----------CGT-----------------------------------------------------------------CTGGTCAAA-AA----------------------------------------------------------ATTAAGTAGA-CATAAAAA-CAAAAAAAAACAT--------------------------------------------AAGT---AACATTAT------------TTTAATTGCA-----------------------------------------------------AATTA-AGGTTTTTA-AAAG-A------------------C------------A-------------------------------------CTCTCC-------GTTACTC--GT--AGGGGAAAGGTATATATTGTACTTATTGAC--------AATTTGTACCAGGTGGAAGGAAGAGTTTCCGAACCTATAAAGTATATATATTCTTGATCAGGATCAATAGCCCAGCTGATCTAGGCATGTCCGTCT
droRho1 scf7180000776710:839-1102 - CTG----AGACAACAAGTG-T---GAG-GGGTAG-GC----------CGC-----------------CCC--TTACGCCAGCGAAGGAGCATCAGCGAGCCAAGCCGGACCCTGGATAAGTAAACCGACATCGCT-------------------------------------------------TC--------------------------------------------------------------------------CAAGAGCGCACATCT---------------------------------------------------------------------------------T------------------------------------------------AAA-----TTTT-------------------------TATACCC-------GTTACTC--GT--AGAGTAAAACGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAAAAGGAAGCGTTTCCGACCCTATGAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCT
droFic1 scf7180000454072:186475-186650 - TAA----ATTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAA----------A----------------------------------TGTGAGGC---AAATCT---------------------------------------------------------------------------------TT--GC---------------------------------T-----------T-----TTAT-------------------------TATACCCT------------T--GC--AGAGCAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAAGCACCTCAGACCCGATAAAGTATATATATTCTTGATCAGCATCACCATCTGAATCGAAATACGTCTGTCCGTCT
droKik1 scf7180000302705:88473-88755 - TGG----CAACAGCAACAT-CCACGGT-CTGAAA-AC----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGGAGGAATC----------GTTCACTGAGCG-AAAAGTATTCAATATAAAATTTATATTTACAG-GAAAAAC--CTT-TAACCTCTAAAATAGACTTACACTTTGAAACTTTG-A-CTCTGCATTTAC-----TTAT-------------------------TATACCCT------------T----G--------CAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCT
droAna3 scaffold_13417:3392585-3392841 - GTA----GTGAAACAATTT-TCGCAAA-GAGAAA-AC----------TTT-----------------------------------------------------------------ATGATTTAAGCAACCTTGCT-------------------------------------------------TCCGTCGTGCA-G---AAAA-TAAAACAAACAGCC-CTATTTTCTAATCATATTTGTTTT-----------------------------------------------------------------------------------------------------ATGA--------------------TGT-A------------------TGT----------GTT-----TTTT-------------------------TATACCCT------------T----GCA------GAGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACAGCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCT
droBip1 scf7180000395965:13292-13536 + GGG------ACCACAGTCC-TCATTAA-GGGGAG-G------------GT----------------GGTCCACAAAGAC-------AATCTT--------------------------------------------------------------------------------------------AGGTAGGCCGA-GCGTGAC-------CATACT--ATCGCC----------------------------------TGCCTGAC---AATTTT---------------------------------------------------------------------------------TC--TT---------------------------------TTTTTTTATTGTC-----TTTT-------------------------TATACCCT------------T----GCA------GAGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCT
dp5 Unknown_group_18:6136-6348 - GTT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-TTAAATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------TATACCT-------GATACTCAAAA--TGAGTATTGTGGTATATTAGATTTGTGGTAAAAGGGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCAATAAAGTATATATATTCTTGATCAGCATCAAAAGCCGAGTCGATTGAGCCATGTCTGTCT
droPer2 scaffold_755:5830-6034 - AAA----TT---------T------AC-CTTGGC-T---------------------------------------------------------------------------------AACTG--TTGAAAACGCAGCTAAGAGAAACGTACATGAAGTCATCAGAAATGACGAAATACGAAAAGTGGTGA------------------------------C--------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAT----AACTGAATCTCAA-------TGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCTCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGATTCGATTGAGCCATGTCTGTCA
droWil2 scf2_1100000004963:4409247-4409473 - CAA----------CAAGCT-ATACTAG-ATA--G-AA----------CGTTTAA-------AAACGACAA---------------------T--------------------------------------------------------------------------------------------TGGTTAACCTG-TAATAAGC-TTAAATATACTCTTAT--------------------------------------------------------------------GATGATTA-----------------------------------------------------------CT--AG-------------------------------------------TAG-----TTTT-------------------------TATACCCT------------T----G----CAAAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTATATATATTCTCGATCAGCATGACGAGACGAGTTCATATAGCCATGTCCGTCC
droVir3 scaffold_12936:439996-440228 - ACG----------------------AG-GTTGGC-TC----------CGTGGGA------AATATGTTTT---------------------T-------------------TT-----------------------------------------------------------------------TGTTAAGTCGA-TGCCAACA-TTTATGTAAT----------------------------------------------TTTTT---TAAATT---------------------------------------------------------------------------------AA--AT---------------------------------TATTTATTT-AATTATTATTAT-------------------------TATACCCTGAACCCACTAAAA--A---TGGGTAAAAGGGTATATT---------------------GTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGTATATATATTCCTGATCAGCATCAATAGCCGAGTCGATCCAGCCATGTCTGTCC
droMoj3 scaffold_6540:22301513-22301760 - TCA----GAGCAACATTCT-ATTGGAA-ATCAAA-TG----------CG----------------------------------------------------------------------------------------------------------------------------------------------------GCTA----------------------------------TTTAAATTCAAGATTTCCTAAAGT-TTAAAC---AAAACT------------------------TTCTTTTATGTATA---------------------------------------------------------GT-A------------------TTC----------CTC-----TTTT-------------------------TATACCTG-AACCCATTTTCA--AT--GGGAAATCAGGGTATAATGGTTTTGTTGAAA-------TGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCT
droGri2 scaffold_14853:2920248-2920424 + TAATGTTAAGCAACAATTT-T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAGGC---AACATT---------------------------------------------------------------------------------TG--AT---------------------------------GTTTATTCCCAGC-----TAAT-------------------------TATACCCT------------------------GAACCGA-------------TTGCAAAA-GATTTGTATGTAACAGGCAGAAGGATGCATCCACGACCCTATAAAGTATATATATGCTTGATCAGCATCAGCAGCCGAGCCGATATAGCCGTGTCCGTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGA-GAATAAAG-TTAAGGAAAACATCACGGT----------------------------------TGTCAGGC---AAAGTT---------------------------------------------------------------------------------TG--AT---------------------------------TTATTTTGT-AACTTTTGGAGCTA-------------------------A----------------------ACC------CGGGATTTACTAGATTCCTTGTAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGTATATATATTCTTGATCAGGATAAATATCCAAATCGATCTGGCCATGTCCGTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-------AGTATGTCACAGGCAGAAGGA...........................................................................2411.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGAT-GGAACC..............................................................2211.00100000000001000000
.............................TGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.............................TGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-------AGTATGTCACAGGCAGAAGGAAGCGA......................................................................2911.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGAT................................23200.7515000000150000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATA...............................2430.67200000001001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATAAAT............................2720.50100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGATAAATA...........................2730.33100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCACAGGCAGA...............................................................................1530.33100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACAGGCAGAAGG............................................................................1530.33100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCTGGCCATGTCCGTC.2130.33100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------AGTATGTCACAGGCAGAAGGAA..........................................................................2430.33100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGA......................................................................1570.14100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATAC..............................25100.10100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATA...............................18160.06100000000001000000
droSec2
CCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGA-GAATAACG-TAGAGGAAAACTCCACGGT----------------------------------TGTCAGGC---AAAATT---------------------------------------------------------------------------------TT--AT---------------------------------TTATTTTGG-AACTTTTGGAGCTA-------------------------A----------------------ACC------CGGGATTTACTAGATTCCTTTTAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGTATATAAATTCTTGATCAGGATCAATATCCGAATCGATCTGGCCATGTCCGTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATTCCTTTTAA-------AGT.............................................................................................1811.0010010
dm3
TCG----GGGCAACAATCT-CCACGAG-GTGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGATGAATAAAG-TCGAGGAAAACTCCATGGT----------------------------------T-----------------------------------------------------------------------------------------------------AG---------------------------------TTAATTTTG-AACT-----AGCTA-------------------------T-----------------T-----G-------CCGGGTATACTAGATTTTTTGAAA-------AGTATGTCACAGGCAGAAGGAAGCGAT-GGAACCATACCAAGCATATATATTCTTGAACAGGATCAATATCCCAATCGATCTGGCCATGTCCTTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................CGAG-GTGGAG-AC----------CGTGGAC------GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAT-GGAACCATACCAAG......................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
...................................................................TCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGATGAATAAAG-TCG...........................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CGAGGAAAACTCCATGGT----------------------------------.........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................TCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGATGAA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACGAG-GTGGAG-AC----------CGTGGAC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................CACGAG-GTGGAG-AC----------CGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................G-AC----------CGTGGAC------GAAACGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAG-GTGGAG-AC----------CGTGGAC------GA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AGTGGATGAATAAAG-TCGAGG........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................C------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........GCAACAATCT-CCACGAG-GT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGTTCC---------------------T--------------------------------------------------------------------------------------------TGGTGAGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.CG----GGGCAACAATCT-CCACGAG-GTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGAG-AC----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAGAAGGAAGCGAT-GGAACCA.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAAGCGAT-GGAACCA.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
....................................C----------CGTGGAC------GAAACGTTCC---------------------T--------------------------------------------------------------------------------------------TG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGAG-GTGGAG-AC----------CGTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GTGAGTGGATGAATAAAG-TCG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCCCAATCGATCTGGCCATGTC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CAACAATCT-CCACGAG-GTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGAACAGGAT................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGATTTTTTGAAA-------AGTAT...........................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTTTTTGAAA-------AG..............................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTTTTGAAA-------AGTATGT.........................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTATGTCACAGGCAGA...............................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATATATTCTTGAACAGGA.................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGAACAGGATC...............................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGAACAGGATCA..............................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------AGTATGTCACAGGCAGAAGGAAGT........................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
ACC----A------TGGCC-AAAATAA-ATA--G-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCAAG-TTGCGGAACAA-------------------ATTAGTTTC-----------------------------------------------------------------------------------------------------GGGG-------------------------------------------CTC----------AAC-----TATT-------------------------TATACCA-------GTTACTT--GT--AGAGTAAATGGATATTCTTGATTCTTTGAAA-------AGTATGTAACAGGCAAAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCAATCTGGCCATGTCCGTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGAAA-------AGTATGTAACAGG...................................................................................23110.0911000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTTCCGACCATATAAAGT.....................................................22200.0510000010
droYak3
ACA------------ATTT-ATACTAGAGCATAT-AA----------CGTGAAC------ATTAGATTCC---------------------T--------------------------------------------------------------------------------------------TGATAAGAAG--TAACAAGC-AGGAGAAAGCCATTAC--------------------------------------------------------------------GTTGAC-------------------------------------------------------------------------AAGG-C------------------C------------GCT-----CTTG-------------------------CATACCC-------GTTACTC--GT--AGAGTAAAAGGGTATACAAGATTCGTTAAAA-------AGTATGTAACAGGCAGAAGAAAGCGTTTTCAACCATATAAAGTATATATATACTTGATCAGGATCAATAGCCGAATCGATCTGGCCATGTCCGTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGAAAGCGTT.....................................................................26200.15300000000003
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTC--GT--AGAGTAAAAGGG..........................................................................................................................21200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGGTATACAAGATTCGTT...........................................................................................................23190.05100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GT--AGAGTAAAAGGGTATACAAG..................................................................................................................23190.05100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACAAGATTCGT............................................................................................................20190.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTAAAA-------AGTATGTAACAGGC..................................................................................25200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GT--AGAGTAAAAGGGTATACA....................................................................................................................21200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGAAAGCGTT.....................................................................27200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCCGAATCGATCTG.............18200.05100001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--GT--AGAGTAAAAGGGTATACAA...................................................................................................................22200.05100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGGCCATGTCCGTC.19200.05101000000000
droEug1
GTG----CCGTAACATTCTCTTACAAG-ATGTTT-A-----CAAATCAG--------------------------------------------------------------------------------------------ATGCA-------------------------------------------------------------------------------------------------------------------------------TGCGTGTGAAGTGACC----------TTTTATTAGGGGTGAAATTAGTTAGTA-----------------ATGGGA-------------------------------------------AAC----------AA------TGATTATACGCAAAACCACAACCTCTTTTTATACCC-------GTTACTC--GT--AGAGTAAAAGGGTACACTAGATTCGTTGAAA-------AGTATGTAACAGATAGAAGGAAGCGTTTGCGACCCTATAAAGTATATACATTCTTGATCAGGATCAATAGCGAAATCGATTAAGCCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droBia1
CCC----TGGCAAAAGTCT-CGACGAG-ATCGGGAATCCTAAAAATTAGTGTACCAGCACG--GAGTTCA---------------------T--------------------------------------------------------------------------------------------TGAGGTGGGGAAGAGTGCTA-----------------------------------------------------------------------------------------------------------------------GC-----------------GG-GGGAAAGAATTT-TGGTCG----------------------------------TTAT---CAT-----ATTT-------------------------TTTACCC-------GTTACGC--GT--G------AAAGGTATACTAGTTTCGTCGGAA-------AGTATGCAACAGGTAGAAGGAATCGA--CCGACCCCATAAAGTGAATATATTTTTGATCAGGATCACTAGCCGAGTCGATCTAGGCATGTTCGTCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGG-------CAAAAATTT-CTAAAAA-GTAGG----------------------------AAATTTTCC------------------------------------------------------------------------------------------------------------------TAAAAAATAGA-AATTAAAAACAAAACAAAAAAACATGTT----------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------AATCATGATTTT-------------------------TATACCC-------GTTACTC--GT--AGAGTAAAAGGGTATATTAGATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAACTATATATATTCTTGATCGGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droEle1
AAA----G-------ATTT-ATACATA-GTGACG-AC----------CGT-----------------------------------------------------------------CTGGTCAAA-AA----------------------------------------------------------ATTAAGTAGA-CATAAAAA-CAAAAAAAAACAT--------------------------------------------AAGT---AACATTAT------------TTTAATTGCA-----------------------------------------------------AATTA-AGGTTTTTA-AAAG-A------------------C------------A-------------------------------------CTCTCC-------GTTACTC--GT--AGGGGAAAGGTATATATTGTACTTATTGAC--------AATTTGTACCAGGTGGAAGGAAGAGTTTCCGAACCTATAAAGTATATATATTCTTGATCAGGATCAATAGCCCAGCTGATCTAGGCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droRho1
CTG----AGACAACAAGTG-T---GAG-GGGTAG-GC----------CGC-----------------CCC--TTACGCCAGCGAAGGAGCATCAGCGAGCCAAGCCGGACCCTGGATAAGTAAACCGACATCGCT-------------------------------------------------TC--------------------------------------------------------------------------CAAGAGCGCACATCT---------------------------------------------------------------------------------T------------------------------------------------AAA-----TTTT-------------------------TATACCC-------GTTACTC--GT--AGAGTAAAACGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAAAAGGAAGCGTTTCCGACCCTATGAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droFic1
TAA----ATTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAA----------A----------------------------------TGTGAGGC---AAATCT---------------------------------------------------------------------------------TT--GC---------------------------------T-----------T-----TTAT-------------------------TATACCCT------------T--GC--AGAGCAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAAGCACCTCAGACCCGATAAAGTATATATATTCTTGATCAGCATCACCATCTGAATCGAAATACGTCTGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droKik1
TGG----CAACAGCAACAT-CCACGGT-CTGAAA-AC----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGGAGGAATC----------GTTCACTGAGCG-AAAAGTATTCAATATAAAATTTATATTTACAG-GAAAAAC--CTT-TAACCTCTAAAATAGACTTACACTTTGAAACTTTG-A-CTCTGCATTTAC-----TTAT-------------------------TATACCCT------------T----G--------CAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
droAna3
GTA----GTGAAACAATTT-TCGCAAA-GAGAAA-AC----------TTT-----------------------------------------------------------------ATGATTTAAGCAACCTTGCT-------------------------------------------------TCCGTCGTGCA-G---AAAA-TAAAACAAACAGCC-CTATTTTCTAATCATATTTGTTTT-----------------------------------------------------------------------------------------------------ATGA--------------------TGT-A------------------TGT----------GTT-----TTTT-------------------------TATACCCT------------T----GCA------GAGGGTATTATAATTTTGGTCAAA-------AGTGTGCAACGCAGTGAAGGAGACAGCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................AACCTTGCT-------------------------------------------------TCCGTCGTGCA-G---AAA................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGGAGACAGC.....................................................................2370.141100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGGAGACAGC.....................................................................2570.141010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAGTGAAGGAGACAGC.....................................................................2180.131000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCAACGCAGTGAAGGAGACAG......................................................................2580.131000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCAGTGAAGGAGACAG......................................................................21100.101000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----GCA------GAGGGTATTATAATTTTGGT...........................................................................................................24200.102000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTTTGGTCAAA-------AGTGTGCAACGCA...................................................................................28200.102002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGA.................................21200.051000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-------AGTGTGCAACGCAGTG................................................................................19200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AGTGTGCAACGCAGTGA...............................................................................18200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTCCTGAGTCGATATGAG...........24200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCA..............................21200.051000010
droBip1
GGG------ACCACAGTCC-TCATTAA-GGGGAG-G------------GT----------------GGTCCACAAAGAC-------AATCTT--------------------------------------------------------------------------------------------AGGTAGGCCGA-GCGTGAC-------CATACT--ATCGCC----------------------------------TGCCTGAC---AATTTT---------------------------------------------------------------------------------TC--TT---------------------------------TTTTTTTATTGTC-----TTTT-------------------------TATACCCT------------T----GCA------GAGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTSizeHit CountTotal NormTotal
No Reads
dp5
GTT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-TTAAATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------TATACCT-------GATACTCAAAA--TGAGTATTGTGGTATATTAGATTTGTGGTAAAAGGGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCAATAAAGTATATATATTCTTGATCAGCATCAAAAGCCGAGTCGATTGAGCCATGTCTGTCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTG..........................................................................................23263.00126025001019810
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGT...........................................................................................22225.005003830000900
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTG............................................................................................21215.003002200201500
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................21167.19115011400000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGT.........................................................................................2426.00120410001600
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTG............................................................................................2024.5090500000400
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................20164.387006601001200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTG..........................................................................................2223.0060100000500
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AA............................................................................................................................................................................................................................................................................................................................................21152.533803700000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATG..............................................................................................1922.5050400000010
.....................................................................C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................21152.403613300002000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................24152.133203200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGGGGATGTGTG..........................................................................................2122.0040100000300
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAAAGGGGATG..............................................................................................2422.0040000000400
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AAC...........................................................................................................................................................................................................................................................................................................................................21151.872802700001000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................21151.872802800000000
..............................................................................................................................................................................................................................CA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----T.............................................................................................................................................................................................21151.802702500100100
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---A.............................................................................................................................................................................................................................................................................................................................................20151.672502300002000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AA............................................................................................................................................................................................................................................................................................................................................20151.532302200001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGTAAC......................................................................................2721.5030300000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGTA........................................................................................2521.5030000000300
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................20161.502402300000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGA...........................................................................................2221.5030200000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGT.............................................................................................2021.5030200000100
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................21151.332002000000000
...........................................................................................A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................21131.151501300011000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATA..................................................................................................................................................................................................................................................................................................................................................................................................................21131.081411300000000
......................................................................................................................................................................................................................A-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................21151.071601600000000
...........................................................................................A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-TT............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGT...........................................................................................2121.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGGGGATGTGT...........................................................................................2021.0020200000000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................19160.881401400000000
..T----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAA.................................................................................................................................................................................................................................................................................................................................................................................................................21150.80120900003000
....................................................................................................................................................................................................................................................................TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------T................................................................................................................................................................2190.7870700000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAGTCG..................25130.771001000000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................26150.731101010000000
..T----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATA..................................................................................................................................................................................................................................................................................................................................................................................................................20150.671001000000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................21150.671001000000000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGAT...................................................................................................................................................................................................................................................................................................................................................................................................................20130.6280800000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAAAGC.........................24200.60120930000000
.....................................................................C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAAC................................................................................................................................................................................................................................................................................................................................................................................................................20150.5380700000010
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................22150.5380600000200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTGTAAC......................................................................................2620.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTC..........................................................................................2320.5010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAGT....................23180.5090800100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTAAAAGG...................................................................................................2020.5010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTAAAAGGGG.................................................................................................2120.5010000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTGT.........................................................................................2320.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGTAA.......................................................................................2620.5010000000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGGGGATGTGTGTAAC......................................................................................2520.5010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAAAGGGGATGT.............................................................................................2120.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTGTAG.......................................................................................2540.5020000000200
.............................................................................................................................................................................................................................GCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----..............................................................................................................................................................................................21140.5070700000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAAAAGGGGATGTGTGT.........................................................................................1920.5010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTGTA........................................................................................2420.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGAT...............................................................................................1820.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGT.............................................................................................1920.5010100000000
...........................................................................................A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAAC................................................................................................................................................................................................................................................................................................................................................................................................................19150.4770700000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................23150.4770700000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---A.............................................................................................................................................................................................................................................................................................................................................19150.4770700000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAAC................................................................................................................................................................................................................................................................................................................................................................................................................21150.4770700000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................22150.4060600000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATA..................................................................................................................................................................................................................................................................................................................................................................................................................19150.4060600000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................23130.3850500000000
..............................................................................................................................................................................................................................CA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................24140.3650410000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAGTC...................24170.3560600000000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................22150.3350500000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---..............................................................................................................................................................................................................................................................................................................................................19150.3350500000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGTAACT.....................................................................................2830.3310100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTT..........................................................................................2360.3320200000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................20150.3350500000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGGGGATGTGTGTAACT.....................................................................................2730.3310100000000
............................................................................................................................................................................................................................GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................20150.3350500000000
............................................................................................................................................................................................................................GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................19150.3350500000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAAAGCCGA......................27130.3140400000000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGA....................................................................................................................................................................................................................................................................................................................................................................................................................19130.3140400000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAAAGCCG.......................26130.3140400000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAAA--TGAGTATTGTGGTA........................................................................................................................2170.2920000000200
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AAC...........................................................................................................................................................................................................................................................................................................................................22150.2740301000000
.....................................................................C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAA.................................................................................................................................................................................................................................................................................................................................................................................................................19150.2740300010000
......................................................................................................................................................................................................................A-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................20150.2740300001000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................25150.2740400000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACGTCCAGAAGGA...........................................................................19200.2550500000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGGAA..........................................................................21200.2550500000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTC............................................................................................2140.2510100000000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAA.................................................................................................................................................................................................................................................................................................................................................................................................................22130.2330300000000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................24130.2330300000000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATG..................................................................................................................................................................................................................................................................................................................................................................................................................21130.2330300000000
..................................................................................................................................................................................................................................................................T-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------T................................................................................................................................................................2290.2220200000000
..............................................................................................................................................................................................................................CA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------T................................................................................................................................................................2590.2220200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGA......................21190.2140310000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAA.................................................................................................................................................................................................................................................................................................................................................................................................................20150.2030300000000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................24150.2030300000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGA.........................................................................................2450.2010000100000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AAC...........................................................................................................................................................................................................................................................................................................................................20150.2030300000000
......................................................................................................................................................................................................................A-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................19150.2030300000000
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................23150.2030300000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTGTAAA......................................................................................2750.2010100000000
...........................................................................................A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................20150.2030300000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................19160.1930300000000
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AAC...........................................................................................................................................................................................................................................................................................................................................19160.1930300000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAGTCGAT................27110.1820100001000
.TT----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................25110.1820200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCA............................................................21110.1820200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAA--TGAGTATTGTGGTATAT.....................................................................................................................2260.1710100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAG.....................22180.1730300000000
........................................................................................................................................................................................TGTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................20130.1520200000000
.........................................................................................................................................................................................GTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................19130.1520200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAAAAGCC........................25200.1530300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAAAAGC.........................22200.1530210000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACCCAATAAAGTA....................................................2170.1410001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGTA..........................................................................................2370.1410100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTATATTAGATTTGTGG..........................................................................................................2170.1410000001000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----..............................................................................................................................................................................................25140.1420200000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---..............................................................................................................................................................................................................................................................................................................................................18150.1320110000000
..............................................................................................................................................................................................................................CA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----..............................................................................................................................................................................................20150.1320200000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAAA................................................................................................................................................................................................................................................................................................................................................................................................................21150.1320200000000
..T----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................23150.1320200000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGG..................................................................................................................................................................................................................................................................................................................................................18150.1320200000000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................23150.1320200000000
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................22150.1320200000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................23150.1320200000000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---A.............................................................................................................................................................................................................................................................................................................................................18150.1320200000000
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AA............................................................................................................................................................................................................................................................................................................................................18160.1320200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAAA--TGAGTATTGTGGT.........................................................................................................................2080.1310000010000
..............................................................................................................................................................................................................................CA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------TA...............................................................................................................................................................2690.1110100000000
..................................................................................................................................................................................................................................................................T-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------TA...............................................................................................................................................................2390.1110100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGGGGATGTGAA..........................................................................................2390.1110100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAAAAGCC........................23200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAAAAGCCGAGTCGATT...............21110.0910100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAAAAGCCGAGTCGA.................26130.0810100000000
..T----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAACT-T.............................................................................................................................................................................................................................................................................................................................................................................................................24130.0810100000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................28130.0810000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAAAAGCCGAGTCG..................24130.0810100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTTGATCAGCATCAAAAGC.........................29130.0810010000000
..................................................................................................................................................................................................................................................................T-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................21140.0710100000000
.................................................................................................................................................................................................................................................................CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................22140.0710100000000
............................................................................................................................................................................................................................GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TT....................................................................................................................................................................................................21140.0710100000000
...............................................................................................................................................................................................................................A---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................23140.0710100000000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TC............................................................................................................................................................................................27140.0710000000010
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TT....................................................................................................................................................................................................24140.0710100000000
.....................................................................................................................................................................................................................................................................TGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------.................................................................................................................................................................19140.0710100000000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTC-----..............................................................................................................................................................................................25140.0710010000000
.....................................................................C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATA..................................................................................................................................................................................................................................................................................................................................................................................................................18150.0710100000000
........................................................................................................................................................................................TGTTTAGTTGC-GGATAACT-..............................................................................................................................................................................................................................................................................................................................................................................................................19150.0710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCT-------GATACTCAAAA--TGAG..................................................................................................................................21150.0710000001000
....................................................................................................................................................................................................................................................................TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TTTT-------------------------TT...............................................................................................................................................................22150.0710100000000
..................................................................................................................................................................................................................................................................T-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------TTT-----TT............................................................................................................................................................................................19150.0710100000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................22150.0710100000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................27150.0710100000000
...................................................................................................................................................................................................................ATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................24150.0710100000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATG..................................................................................................................................................................................................................................................................................................................................................................................................................19150.0710100000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AAA...........................................................................................................................................................................................................................................................................................................................................22150.0710100000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGA---..............................................................................................................................................................................................................................................................................................................................................19150.0710100000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................26150.0710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAAAAGCCG.......................25150.0710100000000
..T----T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGATAAC................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710100000000
.......T-------------------------------------------------------------C---------------------A--------------------------------------------------------------------------------------------TGTTTAGTTGC-GGAT...................................................................................................................................................................................................................................................................................................................................................................................................................18150.0710100000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AG............................................................................................................................................................................................................................................................................................................................................20150.0710100000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................22150.0710100000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AACT..........................................................................................................................................................................................................................................................................................................................................22150.0710100000000
................................................................................................................................................................................................................AATATAA-----GGCA---------------------------------CT-TTGGGC---AG............................................................................................................................................................................................................................................................................................................................................21150.0710100000000
............................................................................................................................................................................................................................GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................18150.0710100000000
.................................................................................................................................................................................................................ATATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------......................................................................................................................................................................................................25150.0710100000000
..................................................................................................................................................................................................................TATAA-----GGCA---------------------------------CT-TTGGGC---AACGAT---------------------------------------------------------------------------------T------------------------------------------------T.....................................................................................................................................................................................................25150.0710100000000
.....................................................................................................................................................................................................................AA-----GGCA---------------------------------CT-TTGGGC---AACG..........................................................................................................................................................................................................................................................................................................................................18160.0610100000000
......................................................................................................................................................................................................................A-----GGCA---------------------------------CT-TTGGGC---AACGA.........................................................................................................................................................................................................................................................................................................................................18160.0610100000000
....................................................................................................................................................................................................................TAA-----GGCA---------------------------------CT-TTGGGC---AACGT.........................................................................................................................................................................................................................................................................................................................................20160.0610100000000
droPer2
AAA----TT---------T------AC-CTTGGC-T---------------------------------------------------------------------------------AACTG--TTGAAAACGCAGCTAAGAGAAACGTACATGAAGTCATCAGAAATGACGAAATACGAAAAGTGGTGA------------------------------C--------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAT----AACTGAATCTCAA-------TGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCTCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGATTCGATTGAGCCATGTCTGTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATTGAGCCATGTCTGT..2180.252000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGATT....................25200.204040000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTCGATTGAGCCATGTCT....2180.131010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTCGATTGAGCCATGTC.....2090.111000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTCCAGAAGGAATCGTT.....................................................................21200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGATTCGATTGAG............18170.061001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGATTCG..................27180.061010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAT.....................22200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGAT.....................24200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTTTCC..................................................................21200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCTCA...........................................................22200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCTCATA.........................................................23200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGATTCGA.................26200.051010000
droWil2
CAA----------CAAGCT-ATACTAG-ATA--G-AA----------CGTTTAA-------AAACGACAA---------------------T--------------------------------------------------------------------------------------------TGGTTAACCTG-TAATAAGC-TTAAATATACTCTTAT--------------------------------------------------------------------GATGATTA-----------------------------------------------------------CT--AG-------------------------------------------TAG-----TTTT-------------------------TATACCCT------------T----G----CAAAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCATAGAAGGAAGCATCTCCGACCATATAAAGTATATATATTCTCGATCAGCATGACGAGACGAGTTCATATAGCCATGTCCGTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTCGATCAGCATGACG............................2660.17101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGCATAGAAGGAAGCATCTCC..................................................................27200.10202000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCATAGAAGGAAGCATCTCCG.................................................................23200.10202000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATATTAATTTTGGTCAGA-------AG..............................................................................................25200.05101000
droVir3
ACG----------------------AG-GTTGGC-TC----------CGTGGGA------AATATGTTTT---------------------T-------------------TT-----------------------------------------------------------------------TGTTAAGTCGA-TGCCAACA-TTTATGTAAT----------------------------------------------TTTTT---TAAATT---------------------------------------------------------------------------------AA--AT---------------------------------TATTTATTT-AATTATTATTAT-------------------------TATACCCTGAACCCACTAAAA--A---TGGGTAAAAGGGTATATT---------------------GTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCATAAAGTATATATATTCCTGATCAGCATCAATAGCCGAGTCGATCCAGCCATGTCTGTCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCTGATCAGCATCAATAGCC........................25200.204000010000000000000000001200000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATCTCC..................................................................24200.153000000000000000000000000000003000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCAGCATCAATAGCCGAGTCG..................25180.112000000000000000000000000000010000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCATCTCCGACC..............................................................23200.102000000000000000000000000000000020000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCCTGATCAGCATCAATAGCC........................26200.102002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGATCC..............23200.102000002000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGATCAGCATCAATAGCCGAGT....................26200.102000000000000000000000000000010000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGATCAGCATCAATAGCCGAGTCGA.................27170.061000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCCTGATCAGCATCAATAG..........................24200.051000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCATCTC...................................................................18200.051000000010000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTGATCAGCATCAATAGCCGA......................25200.051000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCCAGCCATGTC.....22200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGATCAGCATCAATAGCCGAG.....................25200.051000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCCAGCCATG.......17200.051000000000000000000000000000000000000000000010000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------GTATGTAACAGGCAGAAGGAAGCATC.....................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA--A---TGGGTAAAAGGGTATATT---------------------GTC............................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA--A---TGGGTAAAAGGGTAT.......................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCATC.....................................................................26200.051100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCTGATCAGCATCAATAGC.........................24200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
TCA----GAGCAACATTCT-ATTGGAA-ATCAAA-TG----------CG----------------------------------------------------------------------------------------------------------------------------------------------------GCTA----------------------------------TTTAAATTCAAGATTTCCTAAAGT-TTAAAC---AAAACT------------------------TTCTTTTATGTATA---------------------------------------------------------GT-A------------------TTC----------CTC-----TTTT-------------------------TATACCTG-AACCCATTTTCA--AT--GGGAAATCAGGGTATAATGGTTTTGTTGAAA-------TGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGGTGACGAGCTGAG.....................22200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGCGTGGCAGACCCCACA.........................................................22200.051000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA--AT--GGGAAATCAGGGTAT.......................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGGTGACGAG..........................21200.051001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGGAGAAGGAGGCGTGGCAG.................................................................26200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGAGAAGGAGGCGTGGC...................................................................20200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGGAGAAGGAGGC........................................................................19200.051000100
droGri2
TAATGTTAAGCAACAATTT-T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACAGGC---AACATT---------------------------------------------------------------------------------TG--AT---------------------------------GTTTATTCCCAGC-----TAAT-------------------------TATACCCT------------------------GAACCGA-------------TTGCAAAA-GATTTGTATGTAACAGGCAGAAGGATGCATCCACGACCCTATAAAGTATATATATGCTTGATCAGCATCAGCAGCCGAGCCGATATAGCCGTGTCCGTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/21/2015 at 03:52 PM