ID:

dsi_8957

Coordinate:

2r:10555029-10555178 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.0 -7.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CACACAAGCCGGCAAGCGCACAGGGACATCGTTAAAATCTAAATAGAGAGGTATTCTATTTTGAATTTAGTGTATGCAGGTGTTAAATTAGCTTTCGTTTTAACCATGTTTTTAACCGAACAACATTTCTAAGAAATCCCCCTCTGGTAACCCGTGCATATAAAACCAAACACTCGCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATCGTCAGCTGAATAGTACATACTAT
***************************************************************************************.........((((((...((((.....(((((.....(((((...))))).....)).))).......)))).)))))).........(((.......))).........*****************************************************
Read size # Mismatch Hit Count Total Norm Total M023
head
M024
male body
SRR618934
dsim w501 ovaries
M053
female body
SRR553485
Chicharo_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
M025
embryo
O002
Head
SRR553488
RT_0-2 hours eggs
SRR902008
ovaries
SRR902009
testis
GSM343915
embryo
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGT..................... 18 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAGCTGAA............. 26 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAGCTGA.............. 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAG.................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AACTGAACGTTACGCCGTG................................. 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TACGCCGTGCACTTCGAT........................ 18 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................ACTGAACGTTACGCCGTGCACTTCGA......................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAGC................. 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACTGAACGTTACGCCGTG................................. 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACTTCGATCGTCAGCTGAATAG.......... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CGTTAACTGAACGTTACG...................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCATTCGTTAACTGAACGTT......................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATCGTCAGCTGAATAGTACATACTA. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACTTCGATCGTCAGCTGAATAG.......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTACGCCGTGCACTTCGATCGTCAG.................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAGCT................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTCGATCGTCAGCTGAATAGT......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTGAACGTTACGCCGTGCACC............................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTC.................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CGATCGTCAGCTGAATAGTAC....... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................TTCATTCGTTAACTGAACGTT......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGTGCACTTCGATCGTCAG.................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAACGTTACGCCGTGCACT............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACTTCGATCGTCAGCTGAA............. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........CGGCAAGCGCACAGGGAC............................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATCGTCAGCTGAATAGTA........ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGTCAGCTGAAT............ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACTGAACGTTACGCCGTGCA............................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATTCGTTAACTGAACGTTACGCC.................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGTGCACTTCGATCGTCAGCTA............... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................GCCGTGCACTTCGATCGG..................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTTAACTGAACGTTACGC..................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTCGATCGTCAGCTGAATAGTA........ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGCATCACTCGCTTCATTCGT..................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................TCACTTCCTTCTTTCGTTAACT................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.................GCACAGGGACATCGTTAAAAT.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................TTAGCTTTCGTTTTAACCATG.............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTCGATCGTCAGCTAAATAG.......... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................ACTTCGATCGTCAGCTGAA............. 19 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACTTCGATCGTCAGCTGA.............. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGCACTTCGATCGTCAGCTGA.............. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACTTCGATCGTCAGCTGA.............. 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACTTCGATCGTCAGCT................ 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACTTCGATCGTCAGCTGA.............. 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CCATGCCCTTCGATCGTCAT.................. 20 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................AGAGTATGCCGGTGTAAAA................................................................................................................................................................... 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0
......................GAGAGATCGTTAAGATCTA................................................................................................................................................................................................................. 19 3 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTGTGTTCGGCCGTTCGCGTGTCCCTGTAGCAATTTTAGATTTATCTCTCCATAAGATAAAACTTAAATCACATACGTCCACAATTTAATCGAAAGCAAAATTGGTACAAAAATTGGCTTGTTGTAAAGATTCTTTAGGGGGAGACCATTGGGCACGTATATTTTGGTTTGTGAGCGCGTAGTGAGCGAAGTAAGCAATTGACTTGCAATGCGGCACGTGAAGCTAGCAGTCGACTTATCATGTATGATA
*****************************************************.........((((((...((((.....(((((.....(((((...))))).....)).))).......)))).)))))).........(((.......))).........***************************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
O002
Head
SRR553487
NRT_0-2 hours eggs
GSM343915
embryo
SRR553488
RT_0-2 hours eggs
M024
male body
M025
embryo
M053
female body
M023
head
...................................................................................................................................................................................................CAATTGACTTGCAATGCGGCA.................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................CGCGTAGTGAGCGAAGTAAGC...................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................AAGATAAAACTTAAATCA................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................ATTTGGGTTTGTGAGCG......................................................................... 17 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GGTTTGTGAGCGCGTA..................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCTTTAGGGGGAGACCATTGGGCACGT............................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................GCGTGTCCCTGTAGCAATTTTA.................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCTAGCAGTCGACTTATCATG....... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGAAGCTAGCAGTCGACTTAT........... 21 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................CGTGAAGCTAGCAGTCGACTT............. 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................GAAGCTAGCAGTCGACTTAT........... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTGAGCGAAGTAACCATT................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................TTAAGGGGAGATCATTGGCC................................................................................................ 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................CAAAATTGGCTTGTTGAA............................................................................................................................ 18 2 10 0.30 3 0 0 0 0 0 0 0 0 2 0 1
............................................................................................................CAAAATTGGCTTGTTGAAA........................................................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................AAAAATTGGCTTGTGGAAAT.......................................................................................................................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTAGCAGCAGACTTGTCAT........ 19 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................GGCACGTACAGTTTGG................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................AAAAATTGACTTGTT............................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................AAATTGGCTTGTTGAAAT.......................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10554979-10555228 - dsi_8957 CACACAAGCCGGCAAG--CGCAC----AGGGACATCGTT-----------AAAATCTAAATAGAG-----AGGTATTCTATTTTGA------------------------------------ATT----------------------TA------------------------------------------------------------------GTGTATG--CAGGTGTTAAATTAGCTT----------------------------TCGTTTTAACCATGTTTTT---------------------------------------AACCGA--------------ACAACATTTCTAAGAAATCCCCCTC--TG-GTAACCCGTG----------------CATATAAAACCAAACACTCGCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATC------GTCAGCTG---AATAG------T----ACATACTAT
droSec2 scaffold_1:7392629-7392884 - CACACACACACAAGCCGGCAAGCACACAGGGACATCGTT-----------AAAATCTAAATAGAG-----AGGTATTCTATTTCGA------------------------------------ATT----------------------TA------------------------------------------------------------------ATGTATG--CAGGTGTTAAATTAGCTT----------------------------TCGTTTTAACCATGTTTTT---------------------------------------AACCGA--------------ACAACATTTCTAAAAAATCCCCCTC--TG-GTAACCCGTG----------------CATATAAAACCAAACACCCGCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATA------GTCAGCTG---AATAG------T----ACATACTAT
dm3 chr2R:9867046-9867283 - CACAAGCAGGCAAACA--C--AC----AGGGACATCGTT-----------AAAATCTAAAGATGG-----AGAGACTCTATTTCCA------------------------------------ATT----------------------TA------------------------------------------------------------------ATG------------TTGAATTAGTTT----------------------------TCGTTGAAGCCAT-TTTTT---------------------------------------AACCCA--------------ACAACTTTTTTAAGAAATCCCCGTC--TGGGTAACCCGTG----------------CATATAAAACCCAACGCTCGCGCATCACTCTCTTCATTTGTTACCTGAACGTTACGCCGTGCATTTCGATC------GTCAGCTG---AATAG------T----ACATACTAT
droEre2 scaffold_4845:15953813-15954072 + GGCAAGCAAACACACA--GA----------GACGTCGGTTT-GGGGACTAAAAGTC---------TTAATAGGGTTTCTATTTCGAAT-GAAGTT-----------------------------C----------------------TA--------------------------------------------------------ATGGGTTCTAGTATATG--AA------------GCTT----------------------------TCATTTTAATCATT--TTTGAAATAACAATAATCAGAG----------------------------GTAA----------------TATAAAAAAATCCCCTC--TT-GAAACCCTTG----------------CATATAAAACAGAACGATCGCGCATCGCCCGCTTCATTCGCTAACTGATCGTCTTGCCGTACACTTCGATT------GTCAGCTG---TTTGG------C-----ATTTCTAT
droYak3 2R:7085782-7086044 + CACACACAAAGGCAAG--CATAAACACAGAGACGTCGATTT-AGGGATTAAAAATC---------TTAAAAAAGGTTATATTTTGA------------------------------------TTC----------------------TA------------------------------------------------------------------ATGTATA--AAGTTTTTTGAT---------------------GAATGCAATAATTCAATTTTAATCATTT--TTGATATAACCAGAACCAGAG------------------------------------------------------GTAATCCCCTC--TT-AAAACACTTG----------------CATATAAAAGAAAACGATCGCACATCGCTCGCTTCATTCGTCAACTGAACGTCTCGCCGTGCACTTCGATC------GTCAGCTG---AATGG------T-----ATTTCTAT
droEug1 scf7180000409462:2976818-2977109 + AGCAGGCATACACAGA--------------GTCGTCGGTAAAATTGATTTAAATTA---------TGAAGAAGTGTT-TATTTTTTAT-TAAAAACTACTTTGA------------------ATT----------------------TA------------------------------------------------------------------TTTCGTT--AAGTGGC--------------------------TTAAGCAACATTGCAATATTATTACTTT--ATT-------------------------------ATGCATACTCTCA--------------GTACT-TCTCTCATGC-ACCCCTTTATCG-TAAGCCTCTGCTCTAC----------TATATAA---ATGACGCTGGTGCATCATTCGCGATATTCGTTTACTGAACGCCGCGTCGTGAACTTCGATCGCTTCGGTCAGCTG---TAGTACAATAGTAAAATAATACTAT
droBia1 scf7180000302292:3799360-3799615 - CACACAGGG-----------------------CGTCGGTGG--GGGGCTTAAGTTC---------TTAAAAAGGGGTTT--------GCT-AAAACCCCTTTAA------------------ATT----------------------TA------------------------------------------------------------------TTTACTG--TGGAAGA---------------------------------------------------------------ATAAAAAACCAATCGTTATACTATATGGT-CATTTGCCCA--------------GTAAC-CCCCTA--GCAACCCCCTT--CG-CAAGCCCCTGCACTTC----------TATA--TAAGAAGACGCCGGCGCATCGTTCGCGACAGTCGCCTACTGAACTGAACGCCGCGCACTTCGATCGCC-C-GTCAGCTG---CAATAC-----T----TAACGCTAT
droTak1 scf7180000415376:86621-86867 - AACACAGGGCC----------------------GGCGGAAG-GGGGGTTTAAGTTG---------TGAAAAAGGGTTCT--------T-GGAAAACTCCTTTAA------------------T-------------------TAGCTGGAT---------A----------------TTATTTTATTAATTTCGAGTACGTACCTATTT-----------------------------------------------------------------------------------------------------------------------TTCCTA--------------GTAAT-TG------CGAACCCCCTT--CG-TAAGCCCCTGCGCTTC----------CATATAAA--AAACCGCTGGCGCATCATTCGCGTCATTCGTTCACTGAACGTCGCGCCGTGCACTTCGATT----C-GTCAGCTG---CAATTCC----TAACGCTATACTAT
droEle1 scf7180000491271:227235-227485 - CAAAAGGGCTTGAATG--C--------TGCG-----------------------------------------GAGTT-T--------TCC--AAATTACCTTAA-----------------------------------AGTCAACTCAATTATTAGCCTTAA--------CTAAAAGTAG-TTATTTAATTT----------------------ATTCATA--TAAA------ATGTATTTTGG------------------------------------------------------------------------------------------GGTATTACCCAAAGTAAT-TT------CA-CCACCCGT--AC-CGTACCTTTACAA--A----------CATATAA---AAGACGCTGGCGCATCGTTCGCT-TATTCGTTAGCTGAACGTCGCGCCGTGCACTTCGATC------GTCAGCTG---CACTGCTGTTCT----ATATAGTAT
droRho1 scf7180000777315:18790-19051 + AGAAGG-----------------------------------------TTTTAATTC---------TCGAGAGGTGTTTT---------TCAAAAATTATTTAAA-----------------------------------CTTCAACTCGAT---------AGATGATCAGGCTAAAGTTGT-TTATTA------------------------------------------------------------------------------------ATTTTAGTCATT-------------------------------------AAAAATTTCCTCAGGGTATTATTCAAAATAAC-C-------CGACTCCCCTC--TG-TACGCCTCTGCAA--GCACATATGTACATATAA---AAGACGCTGGCGCATCGTCTGT-TTATTCGTTGGCTAAACGTCGCGTCGTGCACTTCGATC------GTCAGCTG---CTCTGATATTTT----ATATATTAT
droFic1 scf7180000454066:1738280-1738549 + AACACACACAGTGTCG--CAGGC----A------------T-AGGGT-----------------------TA--------------------AAATTGCTTTTTGGTTACTTTTATTTTCGCTTTTAAATAATTTAAAACGGCAATTTGAT---------TAATTATCGCAC--AGATTGC-T---------------------------------TTTTTATAGTTTATTTAA--T-AATT----------------------------TTTTTTAAATTTT-------------------------------------------------GA-------------AATACT-TTTTTGTTCC-TCCCCCGA--CG-CGCGCCCTTGCAC--G----------TATA--TAAAAAGACGCCGCTGCATCGTTCGCCTTATTCATTTACTAAACGTAGCGCGGTGCACTTCGATC---------AGCTG---CGC----------------GACTAT
droKik1 scf7180000302817:320609-320697 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAG---AAACCGCTAACGGATCGTTCGCTTTATTTGCTACTGGAACGTCGCGGCGTGCACTTCGATC---------AGCTGCACTTCTG-----------AGAAACTAT
droAna3 scaffold_13266:17178601-17178663 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTCTCTTTATTGCTTGACCAACCGTCGTCGCGAGCAGTTGATTC------CGTAC-----------------C----CAGTACTAT
dp5 XL_group1a:30813-30840 + CACACACACACACAAA--AACAC----ACATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_26:646931-646963 - CACACAGAACGAGAGA--CGGAG----AGAGACACAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:12175982-12176064 - CACACACACACACACA--CACAC----ACGTACACCACA-----------TAGAGCACAAGGGAT-----TGGAATTGAGGGTTGA------------------------------------ATG----------------------TT------------------------------------------------------------------GTT-TTG--CTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT
droVir3 scaffold_13042:4823435-4823544 + CACACACACACACACA--CACAC----AGACATACAGTT-----------ACGTTAATATGTATT-----------TATATTTGCG-----------------------------------AGCT----------------------GA------------------------------------------------------------------ATTTGTGGCCTGGATTTACGCTAACTT----------------------------TTATTTGGATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT
droMoj3 scaffold_6496:3956954-3957051 - CACACACACACGCACA--CACAC----AC----ATTATG----TTAAATAA-------------------A-AGTTTTTAGTTTAA------------------------------------AGC----------------------TT------------------------------------------------------------------ATGAACA--CACGAG----ATTTGCTTTTTGTGCTTGACCAA--------------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT
droGri2 scaffold_15245:503746-503829 - CACACACACACACACA--TATAC----ATATATATAATT-----------T------------------------------------------------------------------------------------------------TGAATGGTTTCATTAA--------TTAATAGCAA-TTTTGCACTTT----------------------GGGCATG--CAAATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACACAAGCCGGCAAG--CGCAC----AGGGACATCGTT-----------AAAATCTAAATAGAG-----AGGTATTCTATTTTGA------------------------------------ATT----------------------TA------------------------------------------------------------------GTGTATG--CAGGTGTTAAATTAGCTT----------------------------TCGTTTTAACCATGTTTTT---------------------------------------AACCGA--------------ACAACATTTCTAAGAAATCCCCCTC--TG-GTAACCCGTG----------------CATATAAAACCAAACACTCGCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATC------GTCAGCTG---AATAG------T----ACATACTATSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GT..................................1813.00320000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAGCTG---AA.......................2613.00320000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAGCTG---A........................2513.00321000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAG...............................2113.00330000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACGTTACGCCGTG....................................................1912.00202000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCCGTGCACTTCGAT...........................................1812.00200100000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGTTACGCCGTGCACTTCGA............................................2612.00220000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAGC..............................2212.00211000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGTTACGCCGTG....................................................1812.00210000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCGATC------GTCAGCTG---AATAG------..............2312.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTAACTGAACGTTACG.........................................................1811.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCGTTAACTGAACGTT............................................................2011.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------GTCAGCTG---AATAG------T----ACATACTA.2511.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCTG---AATAG------..............2411.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTACGCCGTGCACTTCGATC------GTCAG...............................2711.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAGCT.............................2311.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATC------GTCAGCTG---AATAG------T----.........2211.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGTTACGCCGTGCACC................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTC.................................1911.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATC------GTCAGCTG---AATAG------T----AC.......2111.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCGTTAACTGAACGTT............................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCACTTCGATC------GTCAG...............................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTACGCCGTGCACT................................................2011.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCTG---AA.......................2121.00220000000000000000
.........CGGCAAG--CGCAC----AGGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------GTCAGCTG---AATAG------T----A........1811.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCAGCTG---AAT......................2711.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGTTACGCCGTGCA..................................................2011.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTAACTGAACGTTACGCC.......................................................2311.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCACTTCGATC------GTCAGCTA---.........................2211.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GG..................................1811.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAACTGAACGTTACGC........................................................1811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATC------GTCAGCTG---AATAG------T----A........2311.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCACTCGCTTCATTCGT........................................................................2111.00100000000010000000
...................GCAC----AGGGACATCGTT-----------AAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................................................................TTAGCTT----------------------------TCGTTTTAACCATG.........................................................................................................................................................................................................................................2111.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATC------GTCAGCTG---AA.......................1921.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCGATC------GTCAGCTG---A........................1920.50110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTTCGATC------GTCAGCTG---A........................2120.50110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCTG---A........................2020.50101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCT.............................1820.50110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATC------GTCAGCTG---A........................1820.50110000000000000000
droSec2
CACACACACACAAGCCGGCAAGCACACAGGGACATCGTT-----------AAAATCTAAATAGAG-----AGGTATTCTATTTCGA------------------------------------ATT----------------------TA------------------------------------------------------------------ATGTATG--CAGGTGTTAAATTAGCTT----------------------------TCGTTTTAACCATGTTTTT---------------------------------------AACCGA--------------ACAACATTTCTAAAAAATCCCCCTC--TG-GTAACCCGTG----------------CATATAAAACCAAACACCCGCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATA------GTCAGCTG---AATAG------T----ACATACTATSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATA------GTCAGCTG---AATAG------T----ACA......2213.0030003
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTAACTGAACGTTACGCCG......................................................2312.0022000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATA------GTCAGCTG---AATAG------..............1812.0020002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCGTTAACTGAACGTTACGCCG......................................................2711.0010001
....................................GTT-----------AAAATCTAAATAGAG-----AGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCGATA------GTCAGCTG---AATAG------T----A........2511.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTACGCCGTGCACTTCGATA------G...................................2411.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA------GTCAGCTG---AATAG------T----A........2311.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCACTTCGATA------GTCAGCTG---AA.......................2411.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCATTCGTTAACTGAACG..............................................................2111.0010001
....................................................................................................................................................................................................................................TGTTAAATTAGCTT----------------------------TCGTTTTA...............................................................................................................................................................................................................................................2211.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGAACGTTACGCCGTG....................................................2011.0010001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGTTACGCCGTG....................................................1811.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCTG---AATAG------T----ACATACTA.2211.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATA------GTCAGCTG---AATAG------..............2111.0010001
dm3
CACAAGCAGGCAAACA--C--AC----AGGGACATCGTT-----------AAAATCTAAAGATGG-----AGAGACTCTATTTCCA------------------------------------ATT----------------------TA------------------------------------------------------------------ATG------------TTGAATTAGTTT----------------------------TCGTTGAAGCCAT-TTTTT---------------------------------------AACCCA--------------ACAACTTTTTTAAGAAATCCCCGTC--TGGGTAACCCGTG----------------CATATAAAACCCAACGCTCGCGCATCACTCTCTTCATTTGTTACCTGAACGTTACGCCGTGCATTTCGATC------GTCAGCTG---AATAG------T----ACATACTATSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTC.................................19143.00430000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000100000000001100001000000000000000010012000100202002000435000300000200100130000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GT..................................18139.00390000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000040200015001000000000000000000000000000000000000000000000000000000000000010200000100000000000000000000000000000000000000000000000000000200000000000000000010000020000000100000000000000000000111001101100000000101000000000200111000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAACGTTACGCCGTG....................................................19119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010110000100110000000000000000000000000000000100110000120000000000200110000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGCTG---AA.......................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000100000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000211100000000000000010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGC........................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000004201000000000000000000000000000000000000000000000000002000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------GTCAGCTG---AATAG------T----A........18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000010000000000000000000000000000000000100004000000000100100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTACGCCGTGCATT................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000010000000000010000010010000000000000010000000000001200000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCGTGCATTTCGA............................................1818.0080000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000011020000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACGCCG......................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000200000000100000000000100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAACGTTACGCCGTG....................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000001000100000000000000100000100000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTACGCCGTGCATTTCGA............................................2216.0060000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000001010000000000100000000000000000000000
.....GCAGGCAAACA--C--AC----AGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000002000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGCCG......................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000100000000100000000110000000000000000
.......AGGCAAACA--C--AC----AGGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000001000001000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAG...............................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000001100000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACCCGTG----------------CATATAAAACC......................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCCGTGCATTTCGAT...........................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGCTG---.........................2414.0040000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGC..............................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATC------GTCAGCTG---AATAG------..............2014.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..............................................................................................................................................................................................................................................................................................................................................................AACTTTTTTAAGAAATCCCCGTC--TGGGT.........................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCGTGCATTTCGATC------G...................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTGTTACCTGAACGTTAC..........................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GGGACATCGTT-----------AAAATCTAAAGATGG-----A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGCAGGCAAACA--C--AC----AGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....GCAGGCAAACA--C--AC----AGGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCA................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000100000001000000000000000000000
.........GCAAACA--C--AC----AGGGACATCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATATAAAACCCAACGCTCGCGC..........................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAGAAATCCCCGTC--TGGGTAACC.....................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAACGTTACGCCGTGCA..................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000000000000000
.........................................................AAAGATGG-----AGAGACTCTATTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACGCC.......................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGCCGTG....................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGATC------GTCAGCTG---AATAG------..............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGATC------GTCAGCTG---AATAG------T----AC.......2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCATTTCGATC------GTCAG...............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTACGCCGTGCATTTCGATC------....................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTACGCCGTGCATTTCGATC------GT..................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.ACAAGCAGGCAAACA--C--AC----AGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGCT.............................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGCCGT.....................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACGC........................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................CGTT-----------AAAATCTAAAGATGG-----AGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTAC..........................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................TCGTT-----------AAAATCTAAAGATGG-----AGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACG.........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTACCTGAACGTTACG.........................................................2012.0020000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCAGGCAAACA--C--AC----AGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................AAAATCTAAAGATGG-----AGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGATC------GTCAGCTG---AA.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGCATC.....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAACGTTACGCCGTGATC.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAACGTTACGCCGT.....................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...............A--C--AC----AGGGACATCGTT-----------AAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCATTTCGATC------GTCAGC..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACAAGCAGGCAAACA--C--AC----AGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000
.........................................................AAAGATGG-----AGAGACTCTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................TTGAATTAGTTT----------------------------TCGTTGAAGC.............................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AACTTTTTTAAGAAATCCCCGT.................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTCGATC------GTCAGCTG---AATAG------..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......AGGCAAACA--C--AC----AGGGACATCGTT-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACGCCGTGC...................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCTGAACGTTACGCC.......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAACGTTACGCCGTGCATT................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000
....................................GTT-----------AAAATCTAAAGATGG-----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCGTGCATTTCGATC------GTCAGCT.............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTA...........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTACCTGAACGTTACGCCGT.....................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGCAT---C........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTGAACGTTACGCCGTG....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGAACGTTACGCCGTGCA..................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GTT-----------AAAATCTAAAGATGG-----AGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................GACATCGTT-----------AAAATCTAAAGATGG-----AGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCATTTCGATC------GTCAGCTG---A........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ATCTAAAGATGG-----AGAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCCGTGCATTTCGATC------....................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCATTTCGATC------GTCAGCTG---AATAG------T----.........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTACGCCGTGCATTTCGAT...........................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAGAAATCCCCGTC--TGGGTAACCCGT..................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................TGGGTAACCCGTG----------------CATATAAA.........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000
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droEre2
GGCAAGCAAACACACA--GA----------GACGTCGGTTT-GGGGACTAAAAGTC---------TTAATAGGGTTTCTATTTCGAAT-GAAGTT-----------------------------C----------------------TA--------------------------------------------------------ATGGGTTCTAGTATATG--AA------------GCTT----------------------------TCATTTTAATCATT--TTTGAAATAACAATAATCAGAG----------------------------GTAA----------------TATAAAAAAATCCCCTC--TT-GAAACCCTTG----------------CATATAAAACAGAACGATCGCGCATCGCCCGCTTCATTCGCTAACTGATCGTCTTGCCGTACACTTCGATT------GTCAGCTG---TTTGG------C-----ATTTCTATSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTGATCGTCTTGCCG......................................................19111.001100000011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTACACTTCGATT------GT..................................1813.0031000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTACACTTCGATT------GTCAGCTG---T........................2512.0020000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTACACTTCGATT------GTC.................................1912.0022000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCGTACACTTCGAT...........................................1811.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCGTACACTTCGATT------GTCAG...............................2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAACTGATCGTCTTGCCGTA....................................................2311.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTCGATT------GTCAGCTG---.........................1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTTCGATT------GTCAGCTG---T........................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTTCGATT------GTCAGCTG---TTTGG------C-----A.......2711.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTCGATT------GTCAGCTG---T........................2011.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACTTCGATT------GTCAGCTG---TTTGG------..............2511.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTACACTTCGATT------GTCAGCT.............................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCGATT------GTCAGCTG---TT.......................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCTAACTGATCGTCTTGCC.......................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATCGTCTTGCCGTACA..................................................2011.0010000100
droYak3
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Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTCA................................2012.00201001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCT.............................1812.00220000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTCAACTGAACGTCT...........................................................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGCACTTCGATC------GTCAGCTG---.........................2311.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATC------GTCAGCTG---AA.......................1911.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATC------GTCAGCTG---AA.......................1811.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATC------GTCAGCTG---AATGG------T-----ATT.....2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGAACGTCTCGCCGTGCA..................................................2211.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAACTGAACGTCTCGCCGTGC...................................................2311.00100000010000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCACTTCGATC------GTCA................................1811.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATC------GTCAGCTG---AATGG------T-----........1811.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GT..................................1811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAAACGATCGCACATCGCT....................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGCACTTCGATC------GTC.................................1911.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATC------GTCAGCTG---AATGG------T-----........2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATC------GTCAGCTG---AATGG------T-----........1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAACTGAACGTCTCGCCGTGCACTT...............................................2711.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCGATC------GTCAGCTG---AATGG------T-----........2511.00101000000000
droEug1
AGCAGGCATACACAGA--------------GTCGTCGGTAAAATTGATTTAAATTA---------TGAAGAAGTGTT-TATTTTTTAT-TAAAAACTACTTTGA------------------ATT----------------------TA------------------------------------------------------------------TTTCGTT--AAGTGGC--------------------------TTAAGCAACATTGCAATATTATTACTTT--ATT-------------------------------ATGCATACTCTCA--------------GTACT-TCTCTCATGC-ACCCCTTTATCG-TAAGCCTCTGCTCTAC----------TATATAA---ATGACGCTGGTGCATCATTCGCGATATTCGTTTACTGAACGCCGCGTCGTGAACTTCGATCGCTTCGGTCAGCTG---TAGTACAATAGTAAAATAATACTATSizeHit CountTotal NormTotal
No Reads
droBia1
CACACAGGG-----------------------CGTCGGTGG--GGGGCTTAAGTTC---------TTAAAAAGGGGTTT--------GCT-AAAACCCCTTTAA------------------ATT----------------------TA------------------------------------------------------------------TTTACTG--TGGAAGA---------------------------------------------------------------ATAAAAAACCAATCGTTATACTATATGGT-CATTTGCCCA--------------GTAAC-CCCCTA--GCAACCCCCTT--CG-CAAGCCCCTGCACTTC----------TATA--TAAGAAGACGCCGGCGCATCGTTCGCGACAGTCGCCTACTGAACTGAACGCCGCGCACTTCGATCGCC-C-GTCAGCTG---CAATAC-----T----TAACGCTATSizeHit CountTotal NormTotal
No Reads
droTak1
AACACAGGGCC----------------------GGCGGAAG-GGGGGTTTAAGTTG---------TGAAAAAGGGTTCT--------T-GGAAAACTCCTTTAA------------------T-------------------TAGCTGGAT---------A----------------TTATTTTATTAATTTCGAGTACGTACCTATTT-----------------------------------------------------------------------------------------------------------------------TTCCTA--------------GTAAT-TG------CGAACCCCCTT--CG-TAAGCCCCTGCGCTTC----------CATATAAA--AAACCGCTGGCGCATCATTCGCGTCATTCGTTCACTGAACGTCGCGCCGTGCACTTCGATT----C-GTCAGCTG---CAATTCC----TAACGCTATACTATSizeHit CountTotal NormTotal
No Reads
droEle1
CAAAAGGGCTTGAATG--C--------TGCG-----------------------------------------GAGTT-T--------TCC--AAATTACCTTAA-----------------------------------AGTCAACTCAATTATTAGCCTTAA--------CTAAAAGTAG-TTATTTAATTT----------------------ATTCATA--TAAA------ATGTATTTTGG------------------------------------------------------------------------------------------GGTATTACCCAAAGTAAT-TT------CA-CCACCCGT--AC-CGTACCTTTACAA--A----------CATATAA---AAGACGCTGGCGCATCGTTCGCT-TATTCGTTAGCTGAACGTCGCGCCGTGCACTTCGATC------GTCAGCTG---CACTGCTGTTCT----ATATAGTATSizeHit CountTotal NormTotal
No Reads
droRho1
AGAAGG-----------------------------------------TTTTAATTC---------TCGAGAGGTGTTTT---------TCAAAAATTATTTAAA-----------------------------------CTTCAACTCGAT---------AGATGATCAGGCTAAAGTTGT-TTATTA------------------------------------------------------------------------------------ATTTTAGTCATT-------------------------------------AAAAATTTCCTCAGGGTATTATTCAAAATAAC-C-------CGACTCCCCTC--TG-TACGCCTCTGCAA--GCACATATGTACATATAA---AAGACGCTGGCGCATCGTCTGT-TTATTCGTTGGCTAAACGTCGCGTCGTGCACTTCGATC------GTCAGCTG---CTCTGATATTTT----ATATATTATSizeHit CountTotal NormTotal
No Reads
droFic1
AACACACACAGTGTCG--CAGGC----A------------T-AGGGT-----------------------TA--------------------AAATTGCTTTTTGGTTACTTTTATTTTCGCTTTTAAATAATTTAAAACGGCAATTTGAT---------TAATTATCGCAC--AGATTGC-T---------------------------------TTTTTATAGTTTATTTAA--T-AATT----------------------------TTTTTTAAATTTT-------------------------------------------------GA-------------AATACT-TTTTTGTTCC-TCCCCCGA--CG-CGCGCCCTTGCAC--G----------TATA--TAAAAAGACGCCGCTGCATCGTTCGCCTTATTCATTTACTAAACGTAGCGCGGTGCACTTCGATC---------AGCTG---CGC----------------GACTATSizeHit CountTotal NormTotal
No Reads
droKik1
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAG---AAACCGCTAACGGATCGTTCGCTTTATTTGCTACTGGAACGTCGCGGCGTGCACTTCGATC---------AGCTGCACTTCTG-----------AGAAACTATSizeHit CountTotal NormTotal
No Reads
droAna3
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTCTCTTTATTGCTTGACCAACCGTCGTCGCGAGCAGTTGATTC------CGTAC-----------------C----CAGTACTATSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAACCGTCGTCGCGAGCA..................................................2311.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACCGTCGTCGCGAGC...................................................2011.001000010
dp5
CACACACACACACAAA--AACAC----ACATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
No Reads
droPer2
CACACAGAACGAGAGA--CGGAG----AGAGACACAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droWil2
CACACACACACACACA--CACAC----ACGTACACCACA-----------TAGAGCACAAGGGAT-----TGGAATTGAGGGTTGA------------------------------------ATG----------------------TT------------------------------------------------------------------GTT-TTG--CTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads
droVir3
CACACACACACACACA--CACAC----AGACATACAGTT-----------ACGTTAATATGTATT-----------TATATTTGCG-----------------------------------AGCT----------------------GA------------------------------------------------------------------ATTTGTGGCCTGGATTTACGCTAACTT----------------------------TTATTTGGATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
No Reads
droMoj3
CACACACACACGCACA--CACAC----AC----ATTATG----TTAAATAA-------------------A-AGTTTTTAGTTTAA------------------------------------AGC----------------------TT------------------------------------------------------------------ATGAACA--CACGAG----ATTTGCTTTTTGTGCTTGACCAA--------------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
CACACACACACACACA--TATAC----ATATATATAATT-----------T------------------------------------------------------------------------------------------------TGAATGGTTTCATTAA--------TTAATAGCAA-TTTTGCACTTT----------------------GGGCATG--CAAATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/19/2015 at 12:50 PM