ID:

dsi_8941

 Coordinate:

3l:23743089-23743238 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.1 -4.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-
mature
  1. dsi_13322  2l:22573922-22573945 +
  2. dsi_15423  2l:22698369-22698392 +
  3. dsi_29578  2r:209507-209530 +
  4. dsi_14725  2r:1527056-1527079 +
  5. dsi_8941  3l:23743132-23743155 -
star
  1. dsi_13322  2l:22573951-22573968 +
  2. dsi_15423  2l:22698398-22698415 +
  3. dsi_29578  2r:209536-209553 +
  4. dsi_14725  2r:1527085-1527102 +
  5. dsi_8941  3l:23743109-23743126 -

Sense Strand Reads

GTAATGATAGCCACCCAAGGTCATCATGATCAATGCATTCGAATACACAAGTATGTATATATGTTATAGTATTACCCAACCTCACCTTGTCTTGTTACACCCCTTGCTCGTAGGGTAAGAGGATATACCACATTCGTTGAAAAGTAATAAGCCGGTATGAGGAAGCGTTTCCAACCATATAAAGTATATATATTCTTGATCAGTATCAATAGCTGAATCGATCTGACCAAAGACACTAGAATAACAAAAT
*************************************************************************************************************************************.....................(((((.((((....))))...)))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M053
female body
 M025
embryo
 SRR902009
testis
 M024
male body		 SRR902008
ovaries
 O002
Head
...................................................................................................................................................................................TAAAGTATATATATTCTTGATCAGTA............................................. 26 0 7 3.00 21 16 0 3 0 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTA............................................. 22 0 9 1.00 9 1 0 2 0 6 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTAT............................................ 23 0 9 0.78 7 4 0 0 1 0 0 1 1 0 0 0 0
..........................................................................................................................................................................................TATATATTCTTGATCAGTATCAATA....................................... 25 0 8 0.50 4 4 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAGTATATATATTCTTGATCAGTATC........................................... 26 0 7 0.43 3 0 0 0 0 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATCAAT........................................ 27 0 6 0.33 2 0 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................AAGTATATATATTCTTGATCAGTATCAATA....................................... 30 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATCA.......................................... 25 0 8 0.25 2 0 0 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TTCTTGATCAGTATCAAT........................................ 18 0 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAGTATATATATTCTTGATCAGTA............................................. 24 0 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAGTATATATATTCTTGATCAGTAT............................................ 25 0 8 0.25 2 0 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATCAA......................................... 26 0 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TATATATTCTTGATCAGTATCAAT........................................ 24 0 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................CATCATGATCAATGCATTCGAATACACA......................................................................................................................................................................................................... 28 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CAGTATCAATAGCTGAATCGATCTGA........................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCTGAATCGATCTGACCAAAGACACTT............ 28 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGAC................ 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGTTGAAAAGTATTAAGCCGGTA............................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGACA............... 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGTTGAAAAGTAATAAGCCGGTA............................................................................................. 24 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
.........GCCACCCAAGGTCATCATGATCAATGCA..................................................................................................................................................................................................................... 28 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATAGCTGAATCGATCTGACCAAAGA................. 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGAATCGATCTGACCAAAGACACT............. 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
........................CATCATCAATGCATTCGAATACACAAA....................................................................................................................................................................................................... 27 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AGCTGAATCGATCTGACC...................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGACAC.............. 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................AAGCGTTTCCAACCATAT...................................................................... 18 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................TGAATCGATCTGACCAAAGACACTA............ 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................TCATGATCAATGCATTCGAAT.............................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TCTGACCAAAGACACTAGAATAACAAAA. 28 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................AGCTGAATCGATCTGACCAAAGAC................ 24 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................CAGTATCAATGGCTGAATCGATTTGA........................ 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATCAATA....................................... 28 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCCAGATTCGTTGAAAAGTAAT...................................................................................................... 22 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGACCAAAGACACTATACTAAAAAA.. 25 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................GAATACACAAGTATGT.................................................................................................................................................................................................. 16 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCTGGAAGGTTAAGAGGA............................................................................................................................... 19 3 20 0.15 3 2 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................CTGACCAAAGACACTAGAATAAC..... 23 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TATAAAGTATATATATTCTTGATCAGTA............................................. 28 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATC........................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AAAGTATATATATTCTTGATCAGTA............................................. 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CAAAGACACTAGAATAACAAAA. 22 0 16 0.13 2 0 0 0 0 0 0 0 0 2 0 0 0
...................................................................................................................................................................................TAAAGTATATATATTCTTGGTCAGTAT............................................ 27 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................ATATATATTCTTGATCAGTATCAATA....................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AGTATATATATTCTTGATCAGTATCAA......................................... 27 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TATATTCTTGATCAGTATCAATA....................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAGTATATATATTCTTGATCAGT.............................................. 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CACGTTCGTTGAAAA........................................................................................................... 15 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTCTGAGCAAAGACACTAGAATAACA.... 26 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGT.............................................. 21 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCCAACCATATAAAGT................................................................. 16 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCTTGATCAGTATCAATT....................................... 28 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................AAGTGAAATGCCGGTATGA.......................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0
.................................................................................................................................................................................................................................TCCAAAGACACTAGAATAAAAAA.. 23 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCTTGTTGCACCCCT.................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TAAAGTATATATATTCCTGATCAGTA............................................. 26 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TATATATTCTTGATCAGTATCA.......................................... 22 0 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTGAATCGATCTGA........................ 16 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GTATATATATTCCTGATCAGTATCTAT........................................ 27 2 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAAGACAGTAGAATAACAAAAT 22 1 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TATGATCAAAGACACTAGAATAACAAAA. 28 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGACCAAAGACACTAGAATAACAA... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................TGTTACACCCCGTGA............................................................................................................................................... 15 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATATATATTCTTGATCAGT.............................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTGTTACACCCCGTGA............................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CATTACTATCGGTGGGTTCCAGTAGTACTAGTTACGTAAGCTTATGTGTTCATACATATATACAATATCATAATGGGTTGGAGTGGAACAGAACAATGTGGGGAACGAGCATCCCATTCTCCTATATGGTGTAAGCAACTTTTCATTATTCGGCCATACTCCTTCGCAAAGGTTGGTATATTTCATATATATAAGAACTAGTCATAGTTATCGACTTAGCTAGACTGGTTTCTGTGATCTTATTGTTTTA
**********************************************************************.....................(((((.((((....))))...)))))************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 M053
female body
 M024
male body		 SRR902009
testis
...............................................................................................................................................................................................................................ACTGGTTTCTGTGATCTTATTGTTT.. 25 0 6 1.67 10 1 8 0 1 0 0 0 0 0 0 0
.................................................................AATCACAATGGGTTGGA........................................................................................................................................................................ 17 2 19 1.42 27 27 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTCTGTGATCTTATTGTTT.. 24 0 6 0.83 5 2 0 0 0 0 0 0 2 1 0 0
.....................................................................................................................................................................................................................................TTCTGTGATCTTATTGTTT.. 19 0 16 0.69 11 0 0 0 0 11 0 0 0 0 0 0
.....................................................................................................................................................................................TTCATATATATAAGAACTAGTCAT............................................. 24 0 8 0.63 5 0 1 1 2 0 1 0 0 0 0 0
........................................................................................................................................................................AAGGTTGGTATATTTCATATATATAAG....................................................... 27 0 7 0.57 4 0 1 0 2 0 0 1 0 0 0 0
..............................................................................................................................................................................................ATAAGACCTAGTCTTAGTTGTCGACT.................................. 26 3 20 0.50 10 0 0 10 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTCTGTGATCTTATTGTT... 23 0 20 0.40 8 7 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TGGTTTCTGTGATCTTATTGTTT.. 23 0 10 0.30 3 1 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AGGTTGGTATATTTCATATATATAAG....................................................... 26 0 7 0.29 2 0 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................ATTTCATATATATAAGAACTAGTCAT............................................. 26 0 7 0.29 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GCAAAGGTTGGTATATTTCATATA............................................................. 24 0 7 0.29 2 0 0 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TTCATATATATAAGGACTAGTCAT............................................. 24 1 15 0.27 4 0 0 3 0 0 1 0 0 0 0 0
.........................................................................................................................................................CCATAATCGTCCGCAAAGGTT............................................................................ 21 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................ATCACAATGGGTTGGA........................................................................................................................................................................ 16 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
............................TAGTTACGTAAGCTTATG............................................................................................................................................................................................................ 18 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CTGTGATCTTATTGTTT.. 17 0 16 0.19 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................TGGAGTGGAACAGAGCGA.......................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAGACTGGTTTCTGTGATCTTATTGT.... 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTCACATAAATAAGAACTAGTCAGAGT.......................................... 27 3 20 0.15 3 0 1 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGTTTCTGTGATCTTATTGTT... 21 0 20 0.15 3 2 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TTCATATATATAAGAACTAGTCATAGTT......................................... 28 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AGGTTGGTATATTTCATATATATA......................................................... 24 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ATATTTCATATATATAAGAACTAGTCA.............................................. 27 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TTCATATATATAAGAACTAGTCATAGT.......................................... 27 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................CAGGTTGGTATATTTCATATATATA......................................................... 25 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................AAGGTTGGTATATTTCATATATATA......................................................... 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ATATTTCATATATATAAGAACTAGTCAT............................................. 28 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TCATATATATAAGAACTAGTCATAGTT......................................... 27 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................ATATATAAGAACTAGTCATAGTTA........................................ 24 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................CGGTTGGTATATTTCATATATATAAG....................................................... 26 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................ATCTGTGATCTTATTGTTT.. 19 1 16 0.13 2 0 0 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................TAAGAACTAGTCATAGTTAT....................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GAGGTTGGTATATTTCATATATATAAG....................................................... 27 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................GCAACTTTTCGTTATT.................................................................................................... 16 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GTTGGTATATTTCATATATATAAG....................................................... 24 0 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................ATATAAGACCTAGTCTTAGTTGTCGACT.................................. 28 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGTTTCTGTGATCTTATTGT.... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGTTTCCGTGATCTTATTGTTT.. 23 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................AATCACAATGGGTTGGAGG...................................................................................................................................................................... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CTGTGATCTTATTGTTTTA 19 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTATCGGCTTAGCTAGACTGGT..................... 22 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................AGTGATCTTATTGTTTT. 17 1 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGTGATCTTATTGTTT.. 16 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTTTCTGTGATCTTATTGTTTT. 22 0 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................ATCACAATGGGTTGGAA....................................................................................................................................................................... 17 2 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AGGTTGGAATATTTCATATATATA......................................................... 24 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................ATAATCGTTAGCAAAGGTTG........................................................................... 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTCTGTGATCTTATT...... 20 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
..TTAGTATCGGTGGTTTC....................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................TAATTTTTATAAGAACTAGTCATAGTT......................................... 27 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTTTGTGTTCTTATTGTT... 23 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................ATATTTCATATATATAAGAACTAGTAA.............................................. 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTCTGTGATC........... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...............................TTAGGTAAGCTTATG............................................................................................................................................................................................................ 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................AATCACAATGGGTTGG......................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTGGTTTCTGTGATCTTAT....... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................GAGCAACTTTTCGTTAT..................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGTTTCTGTGATCTTATTC..... 21 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:23743039-23743288 - dsi_8941 GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T----------------------------------ATATGTTATAGTATTACCCAACCT--------CACCT---------------------------------TGT------CTTGTTACACC-CCTTGCTCGTA------GGG-TAAGAGGATATACCACATTCGTTGAAA-------AGTAATAAGCCGG--TATGAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATTCTTGATCAGTATCAATAGCTGAATCGATCTGACCAAAGACACTAGAATAACAAAAT
droSec2 scaffold_147:14152-14401 + GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T----------------------------------ATATTGTATAGTATTACCCAACCT--------CACCT---------------------------------TGT------CTTGTTACACC-CCTTGCCCGTG------GGG-TAAGAGGATATACCACATTCGTTGAAA-------ATTATTAAGCCGG--TATGAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATGCTTGATCAGTATCAATAGCTGAATCGATCTGACCAAAGACTCTAGAATAACAAAAT
dm3 chr3LHet:2455282-2455506 + GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T--------------------------------ATATATGTTATAGTATTAATCAACCC--------GACCT---------------------------------TGT------CTTGTTATACC-TCTTACTCGTA------GAC-TAAGAGGATATACCACATTCGATGAAA-------AGTA----GAAGG--TAGAAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATTCTTGATCAGGATCTATAGCCGAGTCCATCTAAC-----------------------
droEre2 scaffold_4845:190487-190698 + GCAAT---ACTGTCCA-----AA---TTTCATGACG--------------ATCCTTCAGAAGACAA--------------------T----CACACAAGAAAAT------A-----A----------------------AAA-A-----------GTTTT-------------------------------------------------------------ATT------ATTATTACACC-CATTATTCGTA------GAG-TAAAAGGATCCACTACATTCGTTGAAA-------AGTAAGTAACAAG--CAGAAGGAAGCGTTTCCGACCATATTAAGTATATATGTATATTCTTGATCAGGATCAATAGCCGGTTTGATCTGGCCA---------------------
droYak3 v2_chrUn_004:14597-14835 + GTAGT---GATTG---GCC--AG---GGT--TCGAA-------------------------------------TTCAA---TGAATCCGAATTTAAT-----GAAACGTTC-----A----------------------GGT-AT----ATTTATTGCATGAAAT------------------CGA--TTTATCAGT----------------AAATTCATAGC------CTTTTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTAAAA-------AGTATGTAACAGG--CAGAGGGAAGCGTTTCCGACCATTTAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTTCATCTGGCCAAA-------------------
droEug1 scf7180000409891:60270-60477 + GTAAA---GACTGTAAACT--AA---AATTAA----------------------------------ATT----ATAATAAATATTGTTCCATACATAAA---G-----------------------------------------------------------------------------------------------------TTT-------TTA----TTGTTATATATATTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGA--TAGAAGGAAGCGTTTGCGATCCTATAAAGTATAT----ATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCA---------------------
droBia1 scf7180000301589:119966-120186 + ACAA---------CCGGTC--AG---TATCGTTGCG-------------------------------------ATCGT---TGTATTCTA--------------------------------AATAAACTTT--------TTA-T----ACATATCCTACAACTC--------------------C--CTCATCA--------------------------GAA------ATATTTATACCCCCTTACTCGTA------GAG-TAAAAGAGTAAACTAGATTCGGCGGAA-------AGTAAGTAACTGG--TAAACGGATGCGTTTTCGACCCCATAAAGTATATGCATATATTCTTGATCAGGATCACCAGCCGAGTCGATCTAGCCA---------------------
droTak1 scf7180000414505:9547-9751 - T----------AGCCATTG--AA---GGCCG----------------------------------------------------TATTGAAGTTCTCAAATATAT------A-----C----------------------------------ACATTGAAATTTAA-----------------------AA-------CCTA-AGT---------------TATC------CTAGTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATAATAGATTCGTGCAAA-------AGTATGTAACAGG--TAGAAGGAAGCGTTTCCGACCCTATAAACTATAT----ATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCA---------------------
droEle1 scf7180000491006:844130-844337 + AG--T---GATTGTTATTT--TA---GATCTT----------------------------------ATT----ATGAA---TA------------------------------AGA-------------TCTGAAAAAAGTTA-C----ATGTGTCTTATATTTT--------------------A--AT-------CTTA-AAT---------------AATC------GTTATTATACC-CTT-----GC-------------AGAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACATCTCCGACCCTATAAAGTATGT----ATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCA---------------------
droRho1 scf7180000777926:9617-9853 - TTAAT---TATACTATTACAAAA---CACCATCAAG-------------------------------------ATCTA---ACATTTCTGGTATCAAATTATGT------ATTTTG---------TC------ATA----------------------AAAGTTT--CTCAAAT------------------------------CCT-------TTG----CTGTTAAATATTTTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACCGC--TAGAAGGAAGCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCA---------------------
droFic1 scf7180000454052:1733-1945 + GA--------TAACCACTT--GTGAAAAT---CATA-------------------------------T-----ATAA-----ATATTCATATATGAATATATAT------A-----T--------AAAT-------------GG--------CTGGTTGTAGT-------------GAC------------------------TTGGCTAAAAATCA----GTT------TTTATTTTACC-CTT-----GCA------GAG-CAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACACCTCAGACCCCATAAAGTATAT----AAATTCTTGATCAGCATCACCATCTGAATC-------------------------------
droKik1 scf7180000299775:3036-3236 + TGAA----GACGACCTTAC--AA---GTTTACCATA-------------------------------------TTTA------GATTTATTTAGAAAAGAACGT------TTATA-T--------TA---------------------------------------ATACAAGTT--------TA-----------------------------------TCTT------CTTATTATACC-CTT-----GC---------------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCA---------------------
droAna3 scaffold_255:308-522 + TTGGT---AATAGCCAATC--GA---G-TGACCAAG-------------------------------------ACTCA---CGTTTATTA--------------------------------AA-----------------T-ATATCTATTTCTTGTATATCATTAGGC-------------------TTTTCAAT----------------ATCAGTTTTGG------ATTTTTATACC-CTT-----GC-------------AGAGGGTATTATAATTTTGGTCAAA-------AGTGTGCTACGCA--ATGAAGGAGACATCTCCGACCTTATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTCGATGTGA------------------------
droBip1 scf7180000396366:69683-69887 - ATGCT---TATATCAACTCAGGA---GGTGATCCTG-------------------------------------ATCAA---G-------AATATATAA-----------------------------------------------------TTTTTATAGGTTGG-----------------------GAGAT-------GACTTCT-------TCA----CTG------CTTTTTATACC-CTT-----GC-------------AGAGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCA--GTGAAGGAGACATCTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTTAATATGAGCA---------------------
dp5 Unknown_singleton_3794:1186-1410 + CTAAT---TCAACTAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATTTTACCC-------------------TTATCATT-----TAT---------------GTGG------GTTTTTATACC-CGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGAAAAAGTGGATGTGTGTAACGTC--CAGAAGGAATCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCA---------------------
droPer2 scaffold_652:5029-5251 - CA--------------CTT--AA---CGTTATCATGATATACATTTAACGAATCATTACTAAGTAA--------------------T----GTCACGAAAAACT------C-----T----------------------GTT-AC---------------------------------------ATTT---------------------------------ACC------ATTTTTATACC-CGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTC--CAGAAGGAATCGTTTCCGACCTCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCA---------------------
droWil2 scf2_1100000006767:535-748 - GCATC---TATAACCTCCC--GT--------CCATG-------------------------GCCAA-T-----ACCA-----AAAGACAAAAATTAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CACAT--------TC----TA----------------TTTC------ATAATTATACC-CTT-----GC-----------AAAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCA--TAGAAGGAAGCATTTCCGACCATATAAAGTATAT----ATATTCTTGATCAGCACGACGAGACGAGTTGAAATAGCCA---------------------
droVir3 scaffold_12822:134419-134656 - ACAATCGATACTGCTAACT--GG---GGTCAT----------------------------------ATA----ATATA---TA------------------------------AGG-AATTAAATAAAA-------------AA----------GTGC-----TTTTC--A----TACCCTGA-----ACTAG-------AACCT---------------CTTA------CTTGTTATACC-CTGAACCCATTAAAAATGGG-TATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGG--CAGAAGGAAGCATCTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTGGATCTAGCCA---------------------
droMoj3 scaffold_6496:24085117-24085352 - GCAAA---ATTTGCCGTTC--AA---AGTCTTTTTG-------------------------------------GTTAA----GTATTCTATTGTA----------------------GTGTAAATACAT-------------TT----------TTGC-----ATTAC--A----GA-----------GAGATCATTCT-TATAT---------------CTGA------CTGATTATACC-CTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGT-GAAA-------AGTATGTAACAGG--CAGAAGGAATCATCGCAGACCCCATAAAGTATAT----ATATTCTTGATTAGGATGACGAGCTGAGTCGATATAGCC----------------------
droGri2 scaffold_14853:8722615-8722843 - ACAAT---AATATTGTTTT--GC--------ATATT------------------------------TCTATTGATAAA---TGCGTTTGTATATATATGTATAT------A--------------------------------------------------TAATTAGACAACAA--------TTACA---------------------------------AGT------CTTTTTATGCC-CCAAACCCATTAAAAATGGGCAAAACGGGTATAATGGTTTTGTACAAA-------TGTATGTAACGCGTGCTGCCTGAAGCATCAGCGACCCCATAAAGTATAT----ATATTCTTAATCAGGGTCAACAGCCGAATCGCTATATCCA---------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T----------------------------------ATATGTTATAGTATTACCCAACCT--------CACCT---------------------------------TGT------CTTGTTACACC-CCTTGCTCGTA------GGG-TAAGAGGATATACCACATTCGTTGAAA-------AGTAATAAGCCGG--TATGAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATTCTTGATCAGTATCAATAGCTGAATCGATCTGACCAAAGACACTAGAATAACAAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................TAAAGTATAT----ATATTCTTGATCAGTA.............................................2673.0021000000301620000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTA.............................................2291.00900006020100000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTAT............................................2390.78700110001400000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGTATCAATA.......................................2580.50400000000400000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGTATC...........................................2670.43300003000000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATCAAT........................................2760.33200010000001000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGTATCAATA.......................................3060.33200000020000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATCA..........................................2580.25200100010000000000
.................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGTATCAAT........................................1880.25200000000002000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGTA.............................................2480.25200000000200000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGTAT............................................2580.25200200000000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATCAA.........................................2680.25200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGTATCAAT........................................2480.25200000000002000000
.............................CATCATG-------------------------------------ATCAA---TGCATTCGAATACACA..........................................................................................................................................................................................................................................................................................................................2850.20100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................CAGTATCAATAGCTGAATCGATCTGA........................2650.20100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................AGCTGAATCGATCTGACCAAAGACACTT............2850.20100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGAC................2550.20100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGACA...............2650.20100000001000000000
.........................................................................................................................................................................................................................................................................................TCGTTGAAA-------AGTAATAAGCCGG--TA.................................................................................................2450.20100000000000001000
............GCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCA......................................................................................................................................................................................................................................................................................................................................2850.20100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................AATAGCTGAATCGATCTGACCAAAGA.................2650.20100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGAATCGATCTGACCAAAGACACT.............2450.20100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................AGCTGAATCGATCTGACC......................1850.20100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAATCGATCTGACCAAAGACAC..............2750.20100000000010000000
...............................................................................................................................................................................................................................................................................................................................AAGCGTTTCCAACCATAT..........................................................................1850.20100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGAATCGATCTGACCAAAGACACTA............2550.20100000000001000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAAT...............................................................................................................................................................................................................................................................................................................................2150.20101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TCTGACCAAAGACACTAGAATAACAAAA.2850.20100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AGCTGAATCGATCTGACCAAAGAC................2450.20100000000000001000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATCAATA.......................................2860.17100000000100000000
........................................................................................GAATACACAAGTATGT------.............................................................................................................................................................................................................................................................................................................1660.17100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................CTGACCAAAGACACTAGAATAAC.....2370.14100000000001000000
..............................................................................................................................................................................................................................................................................................................................................TATAAAGTATAT----ATATTCTTGATCAGTA.............................................2870.14100000010000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATC...........................................2480.13100000000100000000
.................................................................................................................................................................................................................................................................................................................................................AAAGTATAT----ATATTCTTGATCAGTA.............................................2580.13100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACACTAGAATAACAAAA.22160.13200000000000002000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGTATCAATA.......................................2680.13100000000100000000
...................................................................................................................................................................................................................................................................................................................................................AGTATAT----ATATTCTTGATCAGTATCAA.........................................2780.13100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................T----ATATTCTTGATCAGTATCAATA.......................................2380.13100000000100000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGT..............................................2390.11100000000100000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGT..............................................21100.10100000010000000000
......................................................................................................................................................................................................................................................................................................................................TCCAACCATATAAAGT.....................................................................16100.10100000010000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGTATCAATT.......................................28100.10100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGTATCA..........................................22130.08100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................TGACCAAAGACACTAGAATAACAA...24200.05100000000000001000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGT..............................................19200.05100000000001000000
droSec2
GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T----------------------------------ATATTGTATAGTATTACCCAACCT--------CACCT---------------------------------TGT------CTTGTTACACC-CCTTGCCCGTG------GGG-TAAGAGGATATACCACATTCGTTGAAA-------ATTATTAAGCCGG--TATGAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATGCTTGATCAGTATCAATAGCTGAATCGATCTGACCAAAGACTCTAGAATAACAAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........TAGCCACCC--AA---GGTCATCA.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GTAAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAATACACAAGTATGT------A-----T--------------------------------ATATATGTTATAGTATTAATCAACCC--------GACCT---------------------------------TGT------CTTGTTATACC-TCTTACTCGTA------GAC-TAAGAGGATATACCACATTCGATGAAA-------AGTA----GAAGG--TAGAAGGAAGCGTTTCCAACCATATAAAGTATAT----ATATTCTTGATCAGGATCTATAGCCGAGTCCATCTAAC-----------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................ATATACCACATTCGATGAAA-------..................................................................................................................20112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CTATAGCCGAGTCCATCTAAC-----------------------2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAATACACA..........................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCATCATG-------------------------------------ATCAA---TGCATTCGAATACA............................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................TAAAGTATAT----ATATTCTTGATCAGGA.............................................26202.6553000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000004100001000000000000000000000000000000000000200000000200000000000000000000016022200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................CATG-------------------------------------ATCAA---TGCATTCGAAT...............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAATACACAAAA.......................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....T---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATC...............................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAATACACAA.........................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCTATAGCCGAGTC...............................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGA.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TAGCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---..........................................................................................................................................................................................................................................................................................................................................2611.0010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAA................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AT---GATAGCCACCC--AA---GGTCATCA.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCATG-------------------------------------ATCAA---TGCATTCGAATACAC...........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATAGCCACCC--AA---GGTCATCATG-------------------------------------A.................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CC--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCG..................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................A---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAA................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AAT---GATAGCCACCC--AA---GGTCATCATG-------------------------------------ATC...............................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TACC-TCTTACTCGTA------GAC-TA..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATGAAA-------AGTA----GAAGG--TAGAAGGAAGCGT......................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
................CCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCAT.....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................AGGATCTATAGCCGAGTCCATCTAAC-----------------------2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCCACCC--AA---GGTCATCATG-------------------------------------ATCAA---TGCAT.....................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CGAATACACAAGTATGT------A-----T--------------------------------......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCTATAGC.....................................2141.0040000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATCATG-------------------------------------ATCAA---TGCATTCGAATACACAA.........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CATG-------------------------------------ATCAA---TGCATTCGAATACA............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................C--AA---GGTCATCATG-------------------------------------ATCAA---TGCATTCGAA................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGGATCTATAGCCGAGTCCATCT..........................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGCCACCC--AA---GGTCATCA.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGATCTATAG......................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCCAACCATATAAAGTATAT----ATATT........................................................2570.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TAAAGTATAT----ATATTCTTGATCAGGAT............................................27200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000010000000000000000000000000000000000000000000000002000001000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TAGAAGGAAGCGTTTCCAACC..............................................................................2120.5010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCTATAGCCGAGT................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCTATAGCC....................................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCTATAGCCGAGTC...............................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGGATC...........................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000003000
................................................................................................................................................................................................................................................................................................................................................TAAAGTATAT----ATATTCTTGATCAGG..............................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000200000000000000000000000000000000000000000000000000000200000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGG..............................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCTATAGC.....................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AA---TGCATTCGAATACACAAAA.......................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGGATCT..........................................2260.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCTATAGCC....................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AAGCGTTTCCAACCATATAAAGTATA..................................................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCTATAGCC....................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TAAAGTATAT----ATATTCTTGATCAGGATC...........................................28200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000100000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAT----ATATTCTTGATCAGGAT............................................20200.2550000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TATAT----ATATTCTTGATCAGGA.............................................21200.2040000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCCAACCATATAAAGTATAT----ATATTCT......................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCCAACCATATAAAGTATAT----ATATTC.......................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AAGGAAGCGTTTCCAACCATATAAAG......................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAAGCGTTTCCAACCATATAAAG......................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGGAAGCGTTTCCAACCATATAAAG......................................................................2570.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AAGGAAGCGTTTCCAACCATA...........................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGCGTTTCCAACCATATAAAGTA....................................................................2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAAGCGTTTCCAACCAT............................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GG--TAGAAGGAAGCGTTTCC..................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTATAT----ATATTCTTGATCAGGA.............................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TATAT----ATATTCTTGATCAGG..............................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATC...........................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATATAAAGTATAT----ATATTCTTGATC.................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGG--TAGAAGGAAGCGTTTCC..................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGGATC...........................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATAAAGTATAT----ATATTCTTGATCAGGA.............................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGTATAT----ATATTCTTGATCAGGA.............................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATAAAGTATAT----ATATTCTTGA...................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGG..............................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................AAAGTATAT----ATATTCTTGATCAGGA.............................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATATAAAGTATAT----ATATTCTTGATCA................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................T----ATATTCTTGATCAGGATCTC.........................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAAGTATAT----ATATTCTTGATCAGGATC...........................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGTATAT----ATATTCTTGATCAGGATC...........................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAAGTATAT----ATATTCTTGATCAGG..............................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................ATATAAAGTATAT----ATATTCTT.....................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGGAT............................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATAAAGTATAT----ATATTCTTGATCAGGA.............................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCAAT---ACTGTCCA-----AA---TTTCATGACG--------------ATCCTTCAGAAGACAA--------------------T----CACACAAGAAAAT------A-----A----------------------AAA-A-----------GTTTT-------------------------------------------------------------ATT------ATTATTACACC-CATTATTCGTA------GAG-TAAAAGGATCCACTACATTCGTTGAAA-------AGTAAGTAACAAG--CAGAAGGAAGCGTTTCCGACCATATTAAGTATATATGTATATTCTTGATCAGGATCAATAGCCGGTTTGATCTGGCCA---------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCG...................................21200.0510010000
droYak3
GTAGT---GATTG---GCC--AG---GGT--TCGAA-------------------------------------TTCAA---TGAATCCGAATTTAAT-----GAAACGTTC-----A----------------------GGT-AT----ATTTATTGCATGAAAT------------------CGA--TTTATCAGT----------------AAATTCATAGC------CTTTTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTAAAA-------AGTATGTAACAGG--CAGAGGGAAGCGTTTCCGACCATTTAAAGTATAT----ATATTCTTGATCAGGATCAATAGCCGAGTTCATCTGGCCAAA-------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................TTTCCGACCATTTAAAGTATA..................................................................21200.6012012000000000
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAGGGAAGCGTTTCC..................................................................................26140.57800000000008
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAGGGAAGCGTTTCCGA................................................................................28130.38500000000005
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAGGGAAGCGTTTCCG.................................................................................27130.23300000000003
..................................................................................................................................................................................................................................................................................................................CAGG--CAGAGGGAAGCGTTTCCGACCA.............................................................................26130.15202000000000
....................................................................................................................................................................................................................................................................................................................................TTTCCGACCATTTAAAGTATAT----.............................................................22200.15303000000000
........................................................................................................................................................................................................................................TTTTATACC-CGTTACTCGTA------GAG-....................................................................................................................................................23200.10200200000000
..............................................................................................................................................................................................................................................................................................................GTAACAGG--CAGAGGGAAGCGTTTCCGAC...............................................................................28120.08101000000000
..................................................................................................................................................................................................................................................................................................................CAGG--CAGAGGGAAGCGTTTCCGACC..............................................................................25130.08101000000000
.....................................................................................................................................................................................................................................................................................................................G--CAGAGGGAAGCGTTTCCGACCAT............................................................................24130.08100100000000
..................................................................................................................................................................................................................................................................................................................CAGG--CAGAGGGAAGCGTTTCCGAC...............................................................................24130.08101000000000
....................................................................................................................................................................................................................................................................................................................GG--CAGAGGGAAGCGTTTCC..................................................................................19150.07100000100000
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAGGGAAGCG.......................................................................................21160.06101000000000
...............................................................................................................................................................................................................................................................................................................................AAGCGTTTCCGACCATTTAAAGT.....................................................................23200.05100000010000
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAGGGAAGCGTTTCCT.................................................................................27200.05100000000001
..............................................................................................................................................................................................................................................................................................................................GAAGCGTTTCCGACCATTTAAAGT.....................................................................24200.05100000010000
.....................................................................................................................................................................................................................................................................................................................................TTCCGACCATTTAAAGTATAT----.............................................................21200.05101000000000
...............................................................................................................................................................................................................................................................................................................................AAGCGTTTCCGACCATTTAA........................................................................20200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................GATCAGGATCAATAGCCGAGT................................21200.05100000100000
................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGATCAA.........................................18200.05110000000000
.....................................................................................................................................................................................................................................................TACTCGTA------GAG-TAAAAGGGTATACTAG....................................................................................................................................27200.05101000000000
....................................................................................................................................................................................................................................................................................TAGATTCGTTAAAA-------AGTATGTAACA.......................................................................................................25200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................TTCCGACCATTTAAAGTATA..................................................................20200.05101000000000
droEug1
GTAAA---GACTGTAAACT--AA---AATTAA----------------------------------ATT----ATAATAAATATTGTTCCATACATAAA---G-----------------------------------------------------------------------------------------------------TTT-------TTA----TTGTTATATATATTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGA--TAGAAGGAAGCGTTTGCGATCCTATAAAGTATAT----ATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACAA---------CCGGTC--AG---TATCGTTGCG-------------------------------------ATCGT---TGTATTCTA--------------------------------AATAAACTTT--------TTA-T----ACATATCCTACAACTC--------------------C--CTCATCA--------------------------GAA------ATATTTATACCCCCTTACTCGTA------GAG-TAAAAGAGTAAACTAGATTCGGCGGAA-------AGTAAGTAACTGG--TAAACGGATGCGTTTTCGACCCCATAAAGTATATGCATATATTCTTGATCAGGATCACCAGCCGAGTCGATCTAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
T----------AGCCATTG--AA---GGCCG----------------------------------------------------TATTGAAGTTCTCAAATATAT------A-----C----------------------------------ACATTGAAATTTAA-----------------------AA-------CCTA-AGT---------------TATC------CTAGTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATAATAGATTCGTGCAAA-------AGTATGTAACAGG--TAGAAGGAAGCGTTTCCGACCCTATAAACTATAT----ATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AG--T---GATTGTTATTT--TA---GATCTT----------------------------------ATT----ATGAA---TA------------------------------AGA-------------TCTGAAAAAAGTTA-C----ATGTGTCTTATATTTT--------------------A--AT-------CTTA-AAT---------------AATC------GTTATTATACC-CTT-----GC-------------AGAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACATCTCCGACCCTATAAAGTATGT----ATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTAAT---TATACTATTACAAAA---CACCATCAAG-------------------------------------ATCTA---ACATTTCTGGTATCAAATTATGT------ATTTTG---------TC------ATA----------------------AAAGTTT--CTCAAAT------------------------------CCT-------TTG----CTGTTAAATATTTTTATACC-CGTTACTCGTA------GAG-TAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACCGC--TAGAAGGAAGCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GA--------TAACCACTT--GTGAAAAT---CATA-------------------------------T-----ATAA-----ATATTCATATATGAATATATAT------A-----T--------AAAT-------------GG--------CTGGTTGTAGT-------------GAC------------------------TTGGCTAAAAATCA----GTT------TTTATTTTACC-CTT-----GCA------GAG-CAAAAGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACACCTCAGACCCCATAAAGTATAT----AAATTCTTGATCAGCATCACCATCTGAATC-------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGAA----GACGACCTTAC--AA---GTTTACCATA-------------------------------------TTTA------GATTTATTTAGAAAAGAACGT------TTATA-T--------TA---------------------------------------ATACAAGTT--------TA-----------------------------------TCTT------CTTATTATACC-CTT-----GC---------------AGGGTATTATAATTTCAGTCAGA-------AGTTTGCAACGCA--GTGAAGGAGACGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCA---------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTGGT---AATAGCCAATC--GA---G-TGACCAAG-------------------------------------ACTCA---CGTTTATTA--------------------------------AA-----------------T-ATATCTATTTCTTGTATATCATTAGGC-------------------TTTTCAAT----------------ATCAGTTTTGG------ATTTTTATACC-CTT-----GC-------------AGAGGGTATTATAATTTTGGTCAAA-------AGTGTGCTACGCA--ATGAAGGAGACATCTCCGACCTTATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTCGATGTGA------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................T----ATATTCTTGATCAGGATCACCTCCTGA..................................28200.102200000
..........TAGCCAATC--GA---G-TGACCAAG-------------------------------------ACTCA---CGTT......................................................................................................................................................................................................................................................................................................................................29130.081100000
...............................................................................................................................................................................................................................................................................TATTATAATTTTGGTCAAA-------AGTGTGCT..........................................................................................................27140.071010000
..........................G-TGACCAAG-------------------------------------ACTCA---CGTTTATTA--------------------------------AA-----------------..............................................................................................................................................................................................................................................................................25160.061100000
.................................................................................................................................................................................................................................................................................TTATAATTTTGGTCAAA-------AGTGTGCT..........................................................................................................25180.061010000
............................................................................................................................................................................................................................................................................................................................................................................GATCACCTCCTGAGTCGATG...........................20200.051000010
...........................................................................................................................................................................................................................................................................AGGGTATTATAATTTTGGTCA...........................................................................................................................21200.051100000
droBip1
ATGCT---TATATCAACTCAGGA---GGTGATCCTG-------------------------------------ATCAA---G-------AATATATAA-----------------------------------------------------TTTTTATAGGTTGG-----------------------GAGAT-------GACTTCT-------TCA----CTG------CTTTTTATACC-CTT-----GC-------------AGAGGGTATTATAATTTTGTCCAAA-------AGTGTGCAACGCA--GTGAAGGAGACATCTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGGATCACCTCCTGAGTTAATATGAGCA---------------------SizeHit CountTotal NormTotal
No Reads
dp5
CTAAT---TCAACTAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATTTTACCC-------------------TTATCATT-----TAT---------------GTGG------GTTTTTATACC-CGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGAAAAAGTGGATGTGTGTAACGTC--CAGAAGGAATCGTTTCCGACCCTATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCA---------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGT................................232096.451929018670000420200
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----TAT---------------G..............................................................................................................................................................................................2578.145704580000400
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------TC...............................................................................................................................................................................................................................................................................................................................................2544.251701130100200
......................................................................................TGCGA------------T---------------------------------------------ATATATCTTAGAATTTTACCC-------------------..............................................................................................................................................................................................................................2734.00120600000600
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--A.....................................................................................................................................................................................................................................................................................................................................2563.832301500000800
......................................................................................................................................................TATATCTTAGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2833.67110410000060
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------TCTA---..........................................................................................................................................................................................................................................................................................................................................2743.501401310000000
..........................................................................................................................................................TCTTAGAATTTTACCC-------------------TTATCATT-----TA...............................................................................................................................................................................................................2632.3370000000700
..........................................................................................................................................................TCTTAGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2431.6750400000100
......................................................................................TGCGA------------T---------------------------------------------ATATATCTTAGAATTTTACCC-------------------T.............................................................................................................................................................................................................................2831.6750200000300
........................................................................................................................................................................................................................................................................................TTTGTGGAAAAAGTGGATGTGTG............................................................................................................2331.3340100000120
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2631.3340200000020
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATA.........................................................................24201.152302300000000
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--A.....................................................................................................................................................................................................................................................................................................................................2161.0060100000230
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------....................................................................................................................................................................................................................................................................................................................2661.0060600000000
............................................................................................................................................................TTAGAATTTTACCC-------------------TTATCATT-----TAT---------------G..............................................................................................................................................................................................2671.0070400000300
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATCAT.......................................................................................................................................................................................................................2531.0030210000000
..................................................................................................................................................................................................................................................................TGAG-TATTGGGGTATATTAGA...................................................................................................................................21200.851700000001700
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCG.................................................................................................................................................................................................................................................................................................................................2560.8350500000000
..........................................................................................................................................................................................................................................................................................................GTGTGTAACGTC--CAGAAGGA...........................................................................................20200.801601600000000
.........CAACTAATTC--AA---AATCGCTATA--------------------------------------TC...............................................................................................................................................................................................................................................................................................................................................2440.7530300000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACC..............................................................................19200.751501500000000
..........................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGA.............................20200.701401400000000
.................................................................................................................................................................................................................................................................................TATTAGATTTGTGGAAAAAGT.....................................................................................................................2130.6720000000020
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGC..................................................................................................................................................................................................................................................................................................................................2460.6740400000000
........................................................................................................................................................................................................................................................................................TTTGTGGAAAAAGTGGATGTGT.............................................................................................................2230.6720100000010
..........................................................................................................................................................TCTTAGAATTTTACCC-------------------TTATCATT-----TAT---------------G..............................................................................................................................................................................................2830.6720200000000
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATC.........................................................................................................................................................................................................................2330.6720200000000
..........................................................................................................................................................TCTTAGAATTTTACCC-------------------TTATCATT-----T................................................................................................................................................................................................................2530.6720200000000
..........................................................................................................................................................TCTTAGAATTTTACCC-------------------TTATCAT.......................................................................................................................................................................................................................2330.6720100001000
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTAT..........................................................................23200.651301200000100
..................C--AA---AATCGCTATA--------------------------------------TCTA---TG--A.....................................................................................................................................................................................................................................................................................................................................2060.5030000000120
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------TCT..............................................................................................................................................................................................................................................................................................................................................2640.5020200000000
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------......................................................................................................................................................................................................................................................................2760.5030300000000
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--......................................................................................................................................................................................................................................................................................................................................2460.5030300000000
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------T................................................................................................................................................................................................................................................................................................................................................2440.5020110000000
........................................................................................................................................................................................................................................................................................................ATGTGTGTAACGTC--CAGAAGGAATCG.......................................................................................26200.501001000000000
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------.................................................................................................................................................................................................................................................................................................................................................2340.5020200000000
..........AACTAATTC--AA---AATCGCTA.........................................................................................................................................................................................................................................................................................................................................................................................1940.5020100000100
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2170.4330300000000
..............................................................................................................................................................AGAATTTTACCC-------------------TTATCATT-----TAT---------------G..............................................................................................................................................................................................2470.4330300000000
...................................................................................................................................................................................................................................................................................................AGTGGATGTGTGTAACGTC--...................................................................................................19200.4080000000080
..........................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGGA...........................................................................................................................2280.3830000000030
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTA...........................................................................22200.3570700000000
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATCA........................................................................................................................................................................................................................2430.3310100000000
......................................................................................................................................................TATATCTTAGAATTTTACCC-------------------TTATCA........................................................................................................................................................................................................................2630.3310100000000
............................................................................TA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAAT........................................................................................................................................................................................................................................................2530.3310100000000
...................................A--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAA.........................................................................................................................................................................................................................................................2730.3310100000000
.............................................................................A---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATT.......................................................................................................................................................................................................................................................2530.3310100000000
......................................................................................................................................................TATATCTTAGAATTTTACCC-------------------TTATCAT.......................................................................................................................................................................................................................2730.3310100000000
................TTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCG.................................................................................................................................................................................................................................................................................................................................2660.3320200000000
........................................................................................................................................................................................................................................................................................TTTGTGGAAAAAGTGGATGTGA.............................................................................................................2230.3310100000000
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATCATT-----TA...............................................................................................................................................................................................................2830.3310100000000
..................C--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------A.....................................................................................................................................................................................................................................................................2760.3320000000020
..................................................................................G--ATGCGA------------T---------------------------------------------ATATATCTTAGAATTT......................................................................................................................................................................................................................................................2430.3310100000000
..................................TA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATATCT..............................................................................................................................................................................................................................................................2330.3310000000100
............................................................................TA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATTT......................................................................................................................................................................................................................................................2730.3310100000000
.................................................................................TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATT.......................................................................................................................................................................................................................................................2430.3310100000000
........................................................................................................................................................................................................................................................................................TTTGTGGAAAAAGTGGATGTGTGTAA.........................................................................................................2630.3310000001000
........................................................................................................................................................TATCTTAGAATTTTACCC-------------------TTATCATC-----.................................................................................................................................................................................................................2630.3310010000000
............................................................................TA---TG--ATGCGA------------T---------------------------------------------ATATATCTTAGAATT.......................................................................................................................................................................................................................................................2630.3310100000000
......................................................................................TGCGA------------T---------------------------------------------ATATATCTTAGAATTTTACC..................................................................................................................................................................................................................................................2630.3310100000000
.........................................................................................................................................................................................................................................................................................................TGTGTGTAACGTC--CAGAAGG............................................................................................20200.3060000000060
...........................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCC.............................................................................19200.3060600000000
..................................TA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATG.................................................................................................................................................................................................................................................................2070.2920200000000
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCAT.......................................................................................................................................................................................................................2070.2920200000000
............................................................................................................................................................TTAGAATTTTACCC-------------------TTATCATT-----TA...............................................................................................................................................................................................................2470.2920200000000
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----T................................................................................................................................................................................................................2270.2920200000000
.........CAACTAATTC--AA---AATCGCTATA--------------------------------------TCTA---..........................................................................................................................................................................................................................................................................................................................................2640.2510100000000
..........................................................................................................................................................................................................................................................AAA----ATGAG-TATTGGGGTATATTAGA...................................................................................................................................25200.2550000000500
............................................................................................................................................................................................................................................................................................TGGAAAAAGTGGATGTGTGTA..........................................................................................................2140.2510100000000
...........................................................................................................................................................................................................................................................................................................TGTGTAACGTC--CAGAAGGAA..........................................................................................20200.2550000005000
........TCAACTAATTC--AA---AATCGCC..........................................................................................................................................................................................................................................................................................................................................................................................2040.2510010000000
........TCAACTAATTC--AA---AATCGCTA.........................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
.........CAACTAATTC--AA---AATCGCTATA--------------------------------------TCT..............................................................................................................................................................................................................................................................................................................................................2540.2510100000000
............................................................................................................................................................................................................................................................................................TGGAAAAAGTGGATGTGTGT...........................................................................................................2040.2510000001000
..........AACTAATTC--AA---AATCGCTATA--------------------------------------.................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
........TCAACTAATTC--AA---AATCGCTATA--------------------------------------TCC..............................................................................................................................................................................................................................................................................................................................................2640.2510010000000
........................................................................................................................................................................................................................................................................................................................CAGAAGGAATCGTTTCCGACCC.............................................................................22200.2040040000000
........................................................................................................................................................................................................................................................................................................ATGTGTGTAACGTC--CAGAAGGAAT.........................................................................................24200.2040400000000
......................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCGAGTC...............................22200.2040400000000
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCC....................................19200.2040000400000
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---..........................................................................................................................................................................................................................................................................................................................................2260.1710100000000
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGC..................................................................................................................................................................................................................................................................................................................................2860.1710000100000
.............TAATTC--AA---AATCGCTATA--------------------------------------.................................................................................................................................................................................................................................................................................................................................................1860.1710010000000
..................C--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCG.................................................................................................................................................................................................................................................................................................................................2460.1710100000000
.............TAATTC--AA---AATCGCTATA--------------------------------------TC...............................................................................................................................................................................................................................................................................................................................................2060.1710100000000
..................C--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------......................................................................................................................................................................................................................................................................2660.1710100000000
................TTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCA.................................................................................................................................................................................................................................................................................................................................2660.1710100000000
..............AATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--A.....................................................................................................................................................................................................................................................................................................................................2460.1710100000000
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--AA....................................................................................................................................................................................................................................................................................................................................2660.1710100000000
...............ATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--A.....................................................................................................................................................................................................................................................................................................................................2360.1710100000000
..................C--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------C---------------------------------------------......................................................................................................................................................................................................................................................................2660.1710010000000
................TTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGC..................................................................................................................................................................................................................................................................................................................................2560.1710100000000
.............TAATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATG...................................................................................................................................................................................................................................................................................................................................2760.1710100000000
................TTC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATGCGA------------....................................................................................................................................................................................................................................................................................................................2760.1710100000000
...........ACTAATTC--AA---AATCGCTATA--------------------------------------TCTA---..........................................................................................................................................................................................................................................................................................................................................2460.1710100000000
.................TC--AA---AATCGCTATA--------------------------------------TCTA---TG--ATG...................................................................................................................................................................................................................................................................................................................................2360.1710100000000
..............AATTC--AA---AATCGCTATA--------------------------------------TC...............................................................................................................................................................................................................................................................................................................................................1960.1710100000000
..............AATTC--AA---AATCGCTATA--------------------------------------TCTA---TG--G.....................................................................................................................................................................................................................................................................................................................................2460.1710100000000
................................................................................................................................................................................................................................................................................................AAAAGTGGATGTGTGTAAC........................................................................................................19200.1530000003000
....................................................................................................................................................................................................................................................................................................................TC--CAGAAGGAATCGTTTCCGACCCT............................................................................25200.1530300000000
.....................................................................................................................................................................................................................................................................G-TATTGGGGTATATTAGA...................................................................................................................................18200.1530000000300
............................................................................................................................................................................................................................................................................................................................................................................CATCAATAGCCGAGTCGATTGA.........................22200.1530300000000
...........................................................................................................................................................................................................................................................AA----ATGAG-TATTGGGGTATAT.......................................................................................................................................20200.1530300000000
.................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCCA---------------------21200.1530000003000
.................................................................................................................................................................................................................................................................ATGAG-TATTGGGGTATATTAG....................................................................................................................................21200.1530000000030
................................TATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATG.................................................................................................................................................................................................................................................................2270.1410100000000
..............................................................................................................................................................AGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2070.1410100000000
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----TAT---------------A..............................................................................................................................................................................................2570.1410010000000
............................................................................................................................................................TTAGAATTTTACCC-------------------TTATCATT-----.................................................................................................................................................................................................................2270.1410100000000
.............................CGCTATA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATG.................................................................................................................................................................................................................................................................2570.1410100000000
...................................................................................................................................................................TTTACCC-------------------TTATCATT-----TAT---------------GT.............................................................................................................................................................................................2070.1410010000000
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----TAT---------------GT.............................................................................................................................................................................................2670.1410100000000
...................................................................................................................................................................TTTACCC-------------------TTATCATT-----TAT---------------GTGG------.....................................................................................................................................................................................2270.1410100000000
................................................................................................................................................................AATTTTACCC-------------------TTATCATT-----TAT---------------GT.............................................................................................................................................................................................2370.1410100000000
..................................................................................................................................................................TTTTACCC-------------------TTATCATT-----TAT---------------GTGG------GT...................................................................................................................................................................................2570.1410100000000
.............................................................................................................................................................TAGAATTTTACCC-------------------TTATCATT-----TAT---------------GTG............................................................................................................................................................................................2770.1410100000000
..................................TA--------------------------------------TCTA---TG--ATGCGA------------T---------------------------------------------ATATAT................................................................................................................................................................................................................................................................2170.1410100000000
....................................................................................................................................................................TTACCC-------------------TTATCATT-----TAT---------------GTGG------.....................................................................................................................................................................................2170.1410100000000
........................................................................................................................................................................................................................................................................ATTGGGGTATATTAGATTTGTGGA...........................................................................................................................2480.1310000000010
.......................................................................................................................................................................................................................................................................TATTGGGGTATATTAGATTTGTGGA...........................................................................................................................2580.1310000000100
.......................................................................................................................................................................................................................................................................................................GATGTGTGTAACGTC--CAGAAGGAA..........................................................................................24200.1020200000000
...................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGC.....................................19200.1020200000000
.............................................................................................................................................................................................................................................................................................................TGTAACGTC--CAGAAGGAATC........................................................................................20200.1020000000020
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAAAGT.....................................................................28200.1020010000010
....................................................................................................................................................................................................................................................................................................................TC--CAGAAGGAATCGTTTCCGACCCTA...........................................................................26200.1020200000000
...............................................................................................................................................................................................................................................................................................................................AATCGTTTCCGACCCTATAAAGT.....................................................................23200.1020000000200
......................................................................................................................................................................................................................................................ACTCAAA----ATGAG-TATTGGGGTAT.........................................................................................................................................23200.1020200000000
......................................................................................................................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCGA..................................19200.1020200000000
..............................................................................................................................................................................................................................................................................................................GTAACGTC--CAGAAGGAATCGTTTCCGAC...............................................................................28200.1020200000000
...............................................................................................................................................................................................................................................................................................................................AATCGTTTCCGACCCTATAAAGTATAT----A............................................................28200.0510100000000
......................................................................................................................................................................................................................................GTTTTTATACC-CGATACTCAAA----A.........................................................................................................................................................23200.0510100000000
...........................................................................................................................................................................................................................................TATACC-CGATACTCAAA----ATGA......................................................................................................................................................21200.0510010000000
....................................................................................................................................................................................................................................................................................................................................TTTCCGACCCTATAAAGTATAT----ATA..........................................................25200.0510100000000
....................................................................................................................................................................................................................................................................................................................................TTTCCGACCCTATAAAGTATAT----.............................................................22200.0510000000100
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAAAGA.....................................................................28200.0510000000100
..............................................................................................................................................................................................................................................................................................................GTAACGTC--CAGAAGGAATCGTTTCC..................................................................................25200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGATT...........................22200.0510000001000
.................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCTATAAAGT.....................................................................21200.0510100000000
...........................................................................................................................................................................................................................................................................................................TGTGTAACGTC--CAGAAGGAAT.........................................................................................21200.0510010000000
...................................................................................................................................................................................................................................................................................................................GTC--CAGAAGGAATCGTTTCCGACCCTA...........................................................................27200.0510100000000
.................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCTATAAAGTAT...................................................................23200.0510000000100
.....................................................................................................................................................................................................................................................................................................TGGATGTGTGTAACGTC--CAG................................................................................................20200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................AAGTATAT----ATATTCTTGATCAGC..............................................23200.0510000000100
.....................................................................................................................................................................................................................................................................................................................................................TATAT----ATATTCTTGATCAGCATCAA.........................................25200.0510100000000
......................................................................................................................................................................................................................................GTTTTTATACC-CGATACTCA................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................................AGAAGGAATCGTTTCCGACCCTATAAAG......................................................................28200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................ATAT----ATATTCTTGATCAGCATCAA.........................................24200.0510100000000
........................................................................................................................................................................................................................................................TCAAA----ATGAG-TATTGGGGTATATT......................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCTATAAAGT.....................................................................27200.0510000000010
........................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATTGAGC.......................28200.0510100000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCT............................................................................21200.0510010000000
......................................................................................................................................................................................................................................................................................................................................TCCGACCCTATAAAGTATAT----ATATT........................................................25200.0510100000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAAA.......................................................................26200.0510000000010
................................................................................................................................................................................................................................................................................................................................ATCGTTTCCGACCCTATAAAG......................................................................21200.0510100000000
.......................................................................................................................................................................................................................................TTTTTATACC-CGATACTCAA...............................................................................................................................................................20200.0510000100000
droPer2
CA--------------CTT--AA---CGTTATCATGATATACATTTAACGAATCATTACTAAGTAA--------------------T----GTCACGAAAAACT------C-----T----------------------GTT-AC---------------------------------------ATTT---------------------------------ACC------ATTTTTATACC-CGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGTAAAAGTGTATGTGTGTAACGTC--CAGAAGGAATCGTTTCCGACCTCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCA---------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................T------C-----T----------------------GTT-AC---------------------------------------ATTT---------------------------------ACC------ATTTTTATACC-CG.......................................................................................................................................................................2890.111100000
............................................................................................................................................................................................................................................................................GGGTATATTAGATTTGTGGT...........................................................................................................................20200.102020000
..................T--AA---CGTTATCATGATATACATT..............................................................................................................................................................................................................................................................................................................................................................................22160.061010000
.............................TATCATGATATACATTTAACGAATCAA...................................................................................................................................................................................................................................................................................................................................................................27160.061010000
...........................................................TAAGTAA--------------------T----GTCACGAAAAACT------C-----T----------------------G...............................................................................................................................................................................................................................................................................24170.061010000
..................................TGATATACATTTAACGAATCATTAC................................................................................................................................................................................................................................................................................................................................................................25170.061010000
....................................................TCATTACTAAGTAA--------------------T----GTCACGAAAAACT------C-----.......................................................................................................................................................................................................................................................................................................29170.061010000
......................................ATACATTTAACGAATCATTACTAAGT...........................................................................................................................................................................................................................................................................................................................................................26170.061010000
........................................................TACTAAGTAA--------------------T----GTCACGAAAAACT------C-----.......................................................................................................................................................................................................................................................................................................25180.061010000
..............................................AACGAATCATTACTAAGTAA--------------------T----G...............................................................................................................................................................................................................................................................................................................................22190.051010000
..............................................................................................................................................................................................................................................................................................GTAAAAGTGTATGTGTGTAAC........................................................................................................21200.051010000
..........................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCTCA...........................................................................22200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATTGAGCCA---------------------18200.051000100
.................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGTG....................................................................................................................22200.051000001
............................................................................................................................................................................................................................................................................................TGGTAAAAGTGTATGTGTG............................................................................................................19200.051000001
droWil2
GCATC---TATAACCTCCC--GT--------CCATG-------------------------GCCAA-T-----ACCA-----AAAGACAAAAATTAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CACAT--------TC----TA----------------TTTC------ATAATTATACC-CTT-----GC-----------AAAAAGGGTATATTAATTTTGGTCAGA-------AGTGTGCAACGCA--TAGAAGGAAGCATTTCCGACCATATAAAGTATAT----ATATTCTTGATCAGCACGACGAGACGAGTTGAAATAGCCA---------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................TAAAGGAC--CCCAAATG--------CACAT--------TC----TA----------------T..............................................................................................................................................................................................26200.7014014000
........................................................................................................................................................TATGTTAAAGGAC--CCCAAATG--------CACAT--------.......................................................................................................................................................................................................................26200.5511011000
........................................................................................................................................................TATGTTAAAGGAC--CCCAAATG--------CACA................................................................................................................................................................................................................................25200.5511011000
........................................................................................................................................................TATGTTAAAGGAC--CCCAAATG--------CACAT--------TC----.................................................................................................................................................................................................................28200.25505000
..............................................................................................TAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------C...................................................................................................................................................................................................................................27100.20201010
........................................................................................................................................................................................................................................................................................................................................................AT----ATATTCTTGATCAGCACGA..........................................21200.20400400
..........................................................................................................................................................................................................................................................................................TGGTCAGA-------AGTGTGCAACGCA--TAGA...............................................................................................25200.20404000
................................................................................................T-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------C...................................................................................................................................................................................................................................25110.18201010
............................................................................................................................................................................................................................................................................................GTCAGA-------AGTGTGCAACGCA--TA.................................................................................................21200.15330000
..............................................................................................TAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CAC.................................................................................................................................................................................................................................29100.10101000
..............................................................................................TAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CA..................................................................................................................................................................................................................................28100.10100010
..............................................................................................TAT-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAA..............................................................................................................................................................................................................................................24100.10101000
................................................................................................T-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CACAT--------.......................................................................................................................................................................................................................29110.09101000
................................................................................................T-----G------------------------------------------------ATATGTTAAAGGAC--CCCAAATG--------CACA................................................................................................................................................................................................................................28110.09101000
...........................................................................CA-----AAAGACAAAAATTAT-----G------------------------------------------------ATATGT..............................................................................................................................................................................................................................................................24120.08100010
...........................................................................................AATTAT-----G------------------------------------------------ATATGTTAAAGGAC--CCC.................................................................................................................................................................................................................................................24120.08101000
......................................................................................ACAAAAATTAT-----G------------------------------------------------ATATGT..............................................................................................................................................................................................................................................................18180.06100010
.............................................................................................................................................................TAAAGGAC--CCCAAATG--------CACA................................................................................................................................................................................................................................20200.05101000
......................................................................................................................................................................................................................................................................................................................................................................GATCAGCACGACGAGACGAGTTGA.............................24200.05100100
............................................................................................................................................................TTAAAGGAC--CCCAAATG--------CACAT--------TC----TA----------------...............................................................................................................................................................................................26200.05101000
............................................................................................................................................................TTAAAGGAC--CCCAAATG--------CACAT--------TC----TA----------------T..............................................................................................................................................................................................27200.05101000
........................................................................................................................................................................................................................................................................................................................................................AT----ATATTCTTGATCAGCACGACG........................................23200.05110000
........................................................................................................................................................TATGTTAAAGGAC--CCCAAATG--------CACAT--------A......................................................................................................................................................................................................................27200.05101000
droVir3
ACAATCGATACTGCTAACT--GG---GGTCAT----------------------------------ATA----ATATA---TA------------------------------AGG-AATTAAATAAAA-------------AA----------GTGC-----TTTTC--A----TACCCTGA-----ACTAG-------AACCT---------------CTTA------CTTGTTATACC-CTGAACCCATTAAAAATGGG-TATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGG--CAGAAGGAAGCATCTCCGACCCCATAAAGTATAT----ATATTCTTGATCAGCATCAATAGCCGAGTGGATCTAGCCA---------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................T----ATATTCTTGATCAGCATCAATAGCC....................................26201.70340000000000000000000000000003031000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCC....................................25200.95190000000000000000000000000000190000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCG...................................23200.50100000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTAAAAATGGG-TATAAGGGTAT.........................................................................................................................................22200.306000000000000000000000000006000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTATGTAACAGG--CAGAAGGAAGCA.......................................................................................24200.204000000000000000000000000040000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGG--CAGAAGGA...........................................................................................27200.153000000000000000000000000000000000000003000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGTAACAGG--CAGAAGGAAGCATCTCCG.................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGCCG...................................26200.102000000000000000000000000000000000000020000000000000000000000000
.................................................................................................................................................................................................................................................................................TATTGTATTTGTGCAAAATCCAAATGTA..............................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TAACAGG--CAGAAGGAAGCAT......................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TAAGGGTATATTGTATTTGTGC............................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTATGTAACAGG--CAGAAGGAAGCATC.....................................................................................26200.051000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTATGTAACAGG--CAGAAG.............................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCATCAATAGCCG...................................25200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGG--CAGAAGGAAGCATCTCC..................................................................................20200.051000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GG--CAGAAGGAAGCATCTCCGACCCCAT..........................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TAACAGG--CAGAAGGAAGCATCTCCG.................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GAAGGAAGCATCTCCGACCC.............................................................................20200.051000000010000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACAGG--CAGAAGGAAGCATCTC...................................................................................21200.051000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAG......................................19200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TGTATGTAACAGG--CAGAAGGAAGCATC.....................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGT................................23200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
GCAAA---ATTTGCCGTTC--AA---AGTCTTTTTG-------------------------------------GTTAA----GTATTCTATTGTA----------------------GTGTAAATACAT-------------TT----------TTGC-----ATTAC--A----GA-----------GAGATCATTCT-TATAT---------------CTGA------CTGATTATACC-CTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGT-GAAA-------AGTATGTAACAGG--CAGAAGGAATCATCGCAGACCCCATAAAGTATAT----ATATTCTTGATTAGGATGACGAGCTGAGTCGATATAGCC----------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................AGGAATCATCGCAGACCCCA...........................................................................20200.051100000
........................................................................................................................................................................................................................................................................................TTTGT-GAAA-------AGTATGTAACAGG--...................................................................................................22200.051100000
droGri2
ACAAT---AATATTGTTTT--GC--------ATATT------------------------------TCTATTGATAAA---TGCGTTTGTATATATATGTATAT------A--------------------------------------------------TAATTAGACAACAA--------TTACA---------------------------------AGT------CTTTTTATGCC-CCAAACCCATTAAAAATGGGCAAAACGGGTATAATGGTTTTGTACAAA-------TGTATGTAACGCGTGCTGCCTGAAGCATCAGCGACCCCATAAAGTATAT----ATATTCTTAATCAGGGTCAACAGCCGAATCGCTATATCCA---------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:32 AM