ID:

dsi_8939

 Coordinate:

3r:24076609-24076758 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.6 -22.4 -22.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. 2l:11948060-11948076 -
  2. 2r:7663845-7663861 -
  3. 2r:13294019-13294035 +
  4. 3l:9893100-9893116 +
  5. 3l:13360503-13360519 -
  6. 3l:22430383-22430399 +
  7. 3r:9027991-9028007 +
  8. 3r:18648816-18648832 -
  9. dsi_8939  3r:24076738-24076754 +
  10. 3r:26169092-26169108 +
  11. x:5839469-5839485 -
  12. dsi_16125  x:12985106-12985122 -

Sense Strand Reads

ACAAAAATCAATTTTCGCGCTCGTGAAAAATATCAGCAGCAAATTGCAAGGTAGATGCGCTAATGGTTAGCTAATTAAAATGCGAAAGTTTTTGGACTTTTTCGTTGCTTTTATTTGTAGTCCGTTTTTCCAATGCACCCACACAGAGGCACAATATTGCAATTTGCTTGAGCGCCCGCGTGTGCGAGTGTGTGTATGTGGGTGTGAATGTGTGCGTGTGCGTGCCAGCTGTATTCCGTACTGTACTCAC
****************************************************************************************....((((((....................))))))...............((((((...(((((....(((....(((....)))...))))))))...))))))..****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
...........................................................................................................................................................................................................................GCGTGCCAGCTGTATTCC............. 18 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................TAATTAAAATGCGCAGGTTCTTG............................................................................................................................................................ 23 3 1 1.00 1 0 0 0 1 0 0 0
.......................................CAAATTGCAAGGTAGATGCGCTA............................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................CAAGGTAGATGCGCTAATGGT....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................TTTTTGGACTTTTTCGTTGCT............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................TTTATTTGTAGTCCGTTTTT......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................TGCTTTTATTTGTAGTCCGTT............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
...............................................ATGGTAGATGGGCTAATG......................................................................................................................................................................................... 18 2 6 0.33 2 0 0 0 0 0 2 0
.................................................GGTAGATGGGCTAAT.......................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 1 0 0
.......................................................................TGATTAAAATGCGAAAGATT............................................................................................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 1
...............................................AAGGTAGATGGGCTA............................................................................................................................................................................................ 15 1 10 0.10 1 0 0 0 0 1 0 0
...................................................................................................................................................................................GTGTGCGAGTGTGTGTA...................................................... 17 0 12 0.08 1 0 0 0 0 1 0 0
....................................................................................................TTCGGTGCTGTTATTTGTCG.................................................................................................................................. 20 3 15 0.07 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................TGTGGGTGAGAATGTG...................................... 16 1 17 0.06 1 0 0 0 0 1 0 0
....................................................................................................................................................................TGCTTGGACGCCCGCG...................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0
...............................................TAGGTAGATGGGCTAA........................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

TGTTTTTAGTTAAAAGCGCGAGCACTTTTTATAGTCGTCGTTTAACGTTCCATCTACGCGATTACCAATCGATTAATTTTACGCTTTCAAAAACCTGAAAAAGCAACGAAAATAAACATCAGGCAAAAAGGTTACGTGGGTGTGTCTCCGTGTTATAACGTTAAACGAACTCGCGGGCGCACACGCTCACACACATACACCCACACTTACACACGCACACGCACGGTCGACATAAGGCATGACATGAGTG
******************************************************....((((((....................))))))...............((((((...(((((....(((....(((....)))...))))))))...))))))..**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 O001
Testis
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.......................................................................................................................................................................................CGCTCACACACATACACC................................................. 18 0 1 60.00 60 60 0 0 0 0 0
......................................................................................................................................................................................ACGCTCACACACATACACC................................................. 19 0 1 12.00 12 12 0 0 0 0 0
................CGCGAGCACTTTTTATAGTCGT.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................TAAACATCAGGCAAAAAGGT...................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................ACACGCTCACACACATACACC................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................GGAATAAAGGTTACTTGGGT............................................................................................................. 20 3 8 0.38 3 0 0 0 0 3 0
.......................................................................................................................................................................................CGCTGACACACATACACCCG............................................... 20 2 5 0.20 1 0 0 0 1 0 0
..........................................................................................................................................................................................TGACACACATACACCCA............................................... 17 1 8 0.13 1 0 0 0 1 0 0
...........................................................................................................................AAAAAAGGTTACGGGGGT............................................................................................................. 18 2 10 0.10 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................CAGGCACGGTCAACATCAG.............. 19 3 15 0.07 1 0 0 0 0 0 1
.................................................................................................................................................................................................CATACACCCACACATACA....................................... 18 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24076559-24076808 + dsi_8939 ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------TT--GGAC---TTT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTTTTCCAATGCA----CCCACA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTGCTTGAGCGCCCGCGTGTGCGAGTGTGTGTAT------------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droSec2 scaffold_4:3578365-3578613 + ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TGGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------TT--GGAC---TTT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTT-TCCAAGGCA----CCCACA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTGCTTGAGCGCCCGCGTGTGCGAGTGTGTGTAT------------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
dm3 chr3R:24715031-24715286 + ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTATAT----GTGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGAC---TCT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTTTTCCAATGCA----CTCACA--CAGAG---------------------------------------------------CC-----AC-A--ATATTGCAATTAGCTTGAGCGCCCGCGTGTGCGAGTGTGTATATGTGTAT------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droEre2 scaffold_4820:3322198-3322443 - ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGGC---TTT---T-TCGTTGG-------------TTTTAT----------TTGTGGTCCGTTTTTCCAATGCA----CCCATA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTCGTTGAACGCCCGCGTGTGCGAGTGTGGGTAT------------GTGT-----GT----TCGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droYak3 3R:21788240-21788501 - ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGGC---TTT---T-CCGTTGG-------------TTTTAT----------TTGTGGTCCGTTTTTCCAATGCA----CCCATA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTCGTTGAGCGCCCTCGTGTACGAGTGTGTGTATGTGTGTGTTTGTCTGT-----TTTTACGTGTA------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droEug1 scf7180000409787:867395-867632 - ACAAAAATCAATTTTCGCGCT-----------------------------TGTGA---------------------AAAA-A-ATCTG--------------------CAGCAAATTGCAAGGTAGAT----GGGCTAATGGTTGT----TCGCTA-----------------ATTAAAATGCGA-AAGT------------------------------TAGT--GA-----TTTTTTTTAG---CT-------------TTTTAT----------TTGTGGTTTGCTTTTCCAATGCA----CCAATA--CAAAG---------------------------------------------------GC-----AA-G--CTATTGCAATTTGGTTAGGCGCTCGCGTGCC------TGTGTAT-------------------------GCGTGTG------TCTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droBia1 scf7180000302075:2037250-2037507 - ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAG--------------------CAGCAAGTTGCAAGGTAGAT----GGGCTAATGGT-------TGGCTA-----------------ATTAAAACGCGA-AAGT------------------------------TAGT--TTGCTGTTTG---T-TTTTGTCTCTCTTTTTTAATTTTTAT----------TTGTGGTCTGTTTTTCCTCGGCA----CCCATA--CCAAG---------------------------------------------------GC-----GA-G--GTATTGCAATTTGGTTAGGCGCCCGCGTGTGTGAGCCTGTGTGT-------------------------GTGTGTG------TGTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droTak1 scf7180000415700:279105-279336 + ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGAT----CGACTAATGGT-------TGGCTA-----------------ATTAAAATGCGA-AAGT------------------------------TAGTTTCGTT---TTT---TTCG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCCATTGCA----CAAACA--CAAAG---------------------------------------------------AC-----AA-G--ATATTGCAATTTGGTTAGGCGACCGCATGTG-----------------------------------TGTAAGTGTG------TGTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droEle1 scf7180000491261:1286153-1286377 + ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGATAGATGGCCTGATTGT-------TGGCAA-----------------ATTAAAATGCGA-AAGT------------------------------TTGT--GG-----TTT---T-AG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCCAACTCA----CCAATA--CATATGC-------------------------------------------------AA-----AA-G--GCATTGCAATTTGGTTAGGCTGCCGCGTGT-------------------------------------------GTG------CGAGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droRho1 scf7180000780007:347552-347771 - ACAAAAATCAATTTTCGCGCT-----------------------------CG-GA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGAT----GGCTTAATTGT-------TGGCAA-----------------ATTAAAATGCGA-AAGT------------------------------TAGT--TG-----TTT---T-TG---GG-------------TTTTAT----------TTGTGGTCTGTTTTTCCAACGCA----CCAACA--CCAAC---------------------------------------------------AC-----GTAAATACATTGCAATTTGGTTT-GCGCCCGCGTGT-------------------------------------------GTG------TGAGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droFic1 scf7180000454073:3635191-3635418 - A---AAATCAATTTTCGCGAT-----------------------------CGTGA---------------------AACA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT------------AGT-------TAGGAA-----------------ATTAAAATTCGA-AAGT------------------------------TAAT--GG-----TTT---T-TG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCG-ATGTA----CCAATA--CAGAA---------------------------------------------------GCT----GG-G--CAATTGCAATTTGGTTAGGCGTCCGCTTGTG------TGTGTGA------------GCGA-----GTGCGAGTGTA------TTCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCAC
droKik1 scf7180000302639:2675295-2675495 - ACAAAAATCAATTTTCGCGCT-----------------------------CGTGC---------------------AAAGCA-AGAAG--------------------CAAGCAGATAAAAGGTATAT----GTTTGCCTGGT-------TGAAAT-----------------GTGAAAATGCAC-AAAAT---------------------TGGAAAGCCC-----------------G-TGATTAC--------------TTTAG----------TGCTAATGTGTTTTTCC-ACGCA----CCAACA--CAGGC---------------------------------------------------GC-----AA-G--GCGCTGCAATTTGGCTGGGCGCGC-----------------------------------------------TTGTG------TGTGTGTGCGTGCCAG------------C-------------------------------CAG
droAna3 scaffold_13340:7875064-7875293 - ACAAAAATCAATTTGCGCGCTGTTTTC-----------------------CCACAAGCCAGCCCGTACCAGGCCCCAAAAAA-GAAAA--------------------CA-CTAGTTAAAAGGTACAT----G--------TT-------TGGCGAGGTTTTCCGTCGTTTACATCAAAGTGCGT-G-------------------------TGGAAAGCTT-----------------------------------------GGGA----------TTGTGGTCTGTTTCTCCCA--CA----CCAACG--CAAGC---------------------------------------------------GT-----CG-G--TCAATGCAATTTG-------------------------------------------------------TGGCCTTG------CGTGTGTTAGTGCCAG------------CTGTA------------TGCC--ACT-GTACTCAC
droBip1 scf7180000396708:975156-975390 + ACAAAAATCAATTTGCGCGCTGTTTTG-----------------------CCACAAGCCAGCCCGTGCCAGGCCCCAAAA-A-AGAAA--------------------ATACTAGTTAAAAGGTACAT----G--------TT-------TGGCGAGATTTTCCACCTTTAACATCAAAGTGCGT-G-------------------------TGGAAAGCTT-----------------------------------------GGGC----------TTGTGGTCTGTTTCTCCCA--CA----CCAACA--CAAGC---------------------------------------------------GTCGGTCAA------AATGCAATTTGTG---G------C-------------------------------------------TTGCGTG------TGTGTGTTAGTGCCAG------------CTGTA------------TGCC--ACT-GTACTCAC
dp5 2:13970801-13971078 - ACAAAAATCAATTT-CGAGCTGCTTTTCTGGCTTTCTAAGAGTGTCTCCGCGTGC--------------------TAAAACAAATAGC--------------------CAG--AGTTGAAAGGTAGTT----CCTCC---GTT---TAGTTGAAGT---TT-----------CTCCAAAATGCTT-GCAATGCCTCCCATCCCCACCCCCCTTAAAAAGGTG-----------------------------------------TGCA----------TTGTGGGCTGATTTCCCCA--CA----C---------------------------------------------------------------GA-----AC-A--GCATTGCAATTAATATA----------------------TGTAGGTGTGTGT----GTTGGGTGAAGGGGTATATGTGCATGTACATG-GCGTGCCAG------------CTGTA------------TTTCCCATT-CTACTCAC
droPer2 scaffold_1001:6628-6772 + T-----------TTCCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---ATT---T-GCATTGT-------------GTTTTGTCG------TTGCGGCTGCGTTT-TCCA-TATA----CA----------------------T--------------------------TGCGCACACAGACGC-----GCACACAGAATGCAATCAGCCTATGTCTATGCGTGTGTGTGTGTGTGTGT------------GTGC-----GTGTGTGTGTG------TGTGTGTGTTT---------------------------------------------------G
droWil2 scf2_1100000004921:802756-803048 - AAAAAAATCAATTTTCACGCTGCCGTT-----------------------TGAGA---------------------AACA-A-ATTCA--------------------CTGAAAAGCGTTAATTATAA------------AGG-------TAGCTT-----------------CCTAATTTGGTT-CAAAT---------------------A---------AT--GAAT---TTT---T-CCTTAAATATAATTTCTTATTCTCAT----------TTGCCAATTTTTT-------TCA----CC------CATAA--------GCATTGCAATTTGAAATATTTTTATATATGTATGTACACAC---------A--T--GCACACC----TATGCATGCGTCCACATA----------------------------TAG-----GTATGCATGTA------TGTGTGTGTGTACGGACTCACATGCACGCTATACAACGAAAATTTTACCCAGCTGCTGCTCAC
droVir3 scaffold_13047:5748337-5748511 + TAGGTATTTGAAAGTCGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTA---------------------T---------GC--A-GT---GTT---T-CTATTGA-------------TTTTAT----------TT-TAGTCTGTTTTGCTTATCCGCTCTCCATTA--TTTAG---------ATATG--------------------------------CAT---------A--T--GTATTGC--------TG------TGCGTGTGCGAGTGTGTGTGT------------GTGT-----GTGTGTGTGTG------TG--TGTGTGTGTGTT------------CTTCA------------TGTGTTGCT-TCAATCGC
droMoj3 scaffold_6473:4451314-4451490 + AATGCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATAATTT---------------------T---------TT--TGTT---TTT---T-TTGTTTT-------------T---GTTTT------TTTGTTATTCGTTTTAGCAAGTT-----TAATTAACCAAATGTAAAATAGTATTG--------------------------------TAT---------AT-G--TTATGAGTGTTTCCTTGTGTGTGCGCGTGTGAGAATGTGTATGT------------GTGT-----GTGTCCATGTG------TTTGTGTGTGTGTGAG------------T-------------------------------TAT
droGri2 scaffold_14853:5517861-5518049 - AACAAATTCGGGTCTCGCAA--------------------------------------------------------A-AT-C-ATAAATATATATTTAATCAATCGAAAAGAAAATTGGAAGGCCAAC----AAAATTGTGCC-------TTGACC-----------------AGAAA----------GTA---------------------T---------T----------------------------------------------GAAAAGTGCGTGCGTA----------------------------------------------------------------------------------------------------CGTCTCTTGTCTGTGTGTGTGCGCGCG------TGTGTGTGTGTGTGTGTATGTGC-----GTGTGAGTGTG------TGTGTGTGTGTGCGAG-----------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------TT--GGAC---TTT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTTTTCCAATGCA----CCCACA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTGCTTGAGCGCCCGCGTGTGCGAGTGTGTGTAT------------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCAG------------CTGTA------------TTCC..............1811.00100001000000000000
...............................................................................................................CAAATTGCAAGGTAGAT----GCGCTA....................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
......................................................................................................................CAAGGTAGAT----GCGCTAATGGT-------........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................TT---------------------T---------TT--GGAC---TTT---T-TCGTTGC-------------T........................................................................................................................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................................................................TTTAT----------TTGTAGTCCGTTTTT..........................................................................................................................................................................................................................................2011.00100000000000001000
.....................................................................................................................................................................................................................................................TGC-------------TTTTAT----------TTGTAGTCCGTT.............................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGAGTGTGTGTA......................................................................................................17120.08100000000001000000
droSec2
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TGGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------TT--GGAC---TTT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTT-TCCAAGGCA----CCCACA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTGCTTGAGCGCCCGCGTGTGCGAGTGTGTGTAT------------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTTGAGCGCCCGCGTGT...................................................................................................................2111.0010100
..............TCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.........................................................................................................................GGTAGAT----GCGCTAATGGT-------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAATGTG------TGCGTGTGC......................................................2011.0011000
.............................................................................................................................GAT----GCGCTAATGGT-------TGGCTA-----------------ATTAAA...........................................................................................................................................................................................................................................................................................................................................................2611.0010001
...........................................................................................................................TAGAT----GCGCTAATGGT-------TGGCTA-----------------T................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAGTGTGTGTAT------------GTGG-----G...............................................................................2011.0010100
..........ATTTTCGCGCT-----------------------------CGTGA---------------------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGCCCGCGTGTGCGAGTG............................................................................................................2211.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGTAT------------GTGG-----GTGTGA..........................................................................2111.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTA------------TTCCGTACT-GTACTCA.2111.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAGCGCCCGCGTGTGCG................................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------TGCGTGTGCGTGCCAG------------CTGT...............................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------------GTGG-----GTGTGAATGTG------TGC............................................................2111.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................T------------GTGG-----GTGTGAATGTG------TGCGTG.........................................................2211.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGTG------TGCGTGTGCGTT...................................................2020.5011000
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGAGTGTGTG........................................................................................................1840.2510010
dm3
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAATTGCAAGGTATAT----GTGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGAC---TCT---T-TCGTTGC-------------TTTTAT----------TTGTAGTCCGTTTTTCCAATGCA----CTCACA--CAGAG---------------------------------------------------CC-----AC-A--ATATTGCAATTAGCTTGAGCGCCCGCGTGTGCGAGTGTGTATATGTGTAT------GTGG-----GTGTGAATGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........AATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TT---------------------T---------GT--GGAC---TCT---T-TCGTTGC-------------T........................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGCAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........AATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGCGCCCGCGTGTGC.................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTG------TGCGTGTGCGTGC..................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................AAAATGCGA-AAGTT---------------------T---------GT--GGAC---.....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000
..............TCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATGCGA-AAGTT---------------------T---------GT--GGAC---TCT---...............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TCGTTGC-------------TTTTAT----------TTGTAGTC.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAAGGTATAT----GTGCTAATGGT-------........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-----GTGTGAATGTG------TGCGTGT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AT------GTGG-----GTGTGAATGTG------TGT............................................................2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAAGGTATAT----GTGCTAATG.................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTTGAGCGCCCGCGTGTGCGAGTG............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AT------GTGG-----GTGTGAATGTG------T..............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATATGTGTAT------GTGG-----GTGT............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------GTGG-----GTGTGAATGTG------TGC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGCGCCCGCGTGT...................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCTTGAGCGCCCGCGTA....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TGTAGTCCGTTTTTCCAATGGT----..............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGAGTGTGTATATGTG..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..............TCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................AA-T-ATCAG--------------------CAGCAAATTGCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGCCCGCGTGTGCGAGT.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----GTGTGAATGTG------TGCGTGTGC......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AAAATGCGA-AAGTT---------------------T---------GT--GG..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGCCAG------------CTGTA------------TTCCGC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TTAAAATGCGA-AAGTT---------------------T---------GT--GG..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTGTAT------GTGG-----GTGTG...........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGAGTGTGTA........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ATTGCAATTAGCTTGAGCGCC..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AATCAATTTTCGCGCT-----------------------------CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TCAG--------------------CAGCAAATTGCAAGGTATAT----G.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGAGTGTGTATATG....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................AAGTT---------------------T---------GT--GGAC---TCT---T-TCGTTGC-------------T........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGAGTGTGTATATGTGT.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGCGTGTGCGAGTGTG..........................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TGCAATTAGCTTGAGCGCCCGCG......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...AAAATCAATTTTCGCGCT-----------------------------CGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CGTTTTTCCAATGCA----CTCAC.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAGCGCCCGCGTGTGCGAGTGTG..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............TTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................A--ATATTGCAATTAGCTTGAGCG............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCGTGTGCGAGTGTGTATATGTG..................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................TGCGA-AAGTT---------------------T---------GT--GGAC---TCT---T-.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGCGCT-----------------------------CGTGA---------------------AAAA-T-ATCAG--------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT------GTGG-----GTGTGAATGTG------T..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AATCAATTTTCGCGCT-----------------------------CGTGA---------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATTTTCGCGCT-----------------------------CGTGA---------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................T------GTGG-----GTGTGAATGTG------TGCGT..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGTG------TGCGTGTGCGTGC..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCCGCGTGTGCGAGTGTGTATATG....................................................................................................2811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAT------GTGG-----GTGTGAATG.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTTCCAATGCA----CTCACA--CAG...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AATGGT-------TAGCTA-----------------ATTAAAATG........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAATGTG------TGCGTGTGCGTG...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGAGTGTGTATA......................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTGCAATTAGCTTGAGCGCC..........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGGC---TTT---T-TCGTTGG-------------TTTTAT----------TTGTGGTCCGTTTTTCCAATGCA----CCCATA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTCGTTGAACGCCCGCGTGTGCGAGTGTGGGTAT------------GTGT-----GT----TCGTG------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................C-----AC-A--ATATTGCAATTTCGTT.................................................................................................................................2011.0010000010
droYak3
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT----GCGCTAATGGT-------TAGCTA-----------------ATTAAAATGCGA-AAGTT---------------------T---------GT--GGGC---TTT---T-CCGTTGG-------------TTTTAT----------TTGTGGTCCGTTTTTCCAATGCA----CCCATA--CAGAG---------------------------------------------------GC-----AC-A--ATATTGCAATTTCGTTGAGCGCCCTCGTGTACGAGTGTGTGTATGTGTGTGTTTGTCTGT-----TTTTACGTGTA------TGCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................GAGCGCCCTCGTGTACGAGTGTG..........................................................................................................2311.00100000010000
droEug1
ACAAAAATCAATTTTCGCGCT-----------------------------TGTGA---------------------AAAA-A-ATCTG--------------------CAGCAAATTGCAAGGTAGAT----GGGCTAATGGTTGT----TCGCTA-----------------ATTAAAATGCGA-AAGT------------------------------TAGT--GA-----TTTTTTTTAG---CT-------------TTTTAT----------TTGTGGTTTGCTTTTCCAATGCA----CCAATA--CAAAG---------------------------------------------------GC-----AA-G--CTATTGCAATTTGGTTAGGCGCTCGCGTGCC------TGTGTAT-------------------------GCGTGTG------TCTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droBia1
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAG--------------------CAGCAAGTTGCAAGGTAGAT----GGGCTAATGGT-------TGGCTA-----------------ATTAAAACGCGA-AAGT------------------------------TAGT--TTGCTGTTTG---T-TTTTGTCTCTCTTTTTTAATTTTTAT----------TTGTGGTCTGTTTTTCCTCGGCA----CCCATA--CCAAG---------------------------------------------------GC-----GA-G--GTATTGCAATTTGGTTAGGCGCCCGCGTGTGTGAGCCTGTGTGT-------------------------GTGTGTG------TGTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droTak1
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGAT----CGACTAATGGT-------TGGCTA-----------------ATTAAAATGCGA-AAGT------------------------------TAGTTTCGTT---TTT---TTCG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCCATTGCA----CAAACA--CAAAG---------------------------------------------------AC-----AA-G--ATATTGCAATTTGGTTAGGCGACCGCATGTG-----------------------------------TGTAAGTGTG------TGTGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droEle1
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGATAGATGGCCTGATTGT-------TGGCAA-----------------ATTAAAATGCGA-AAGT------------------------------TTGT--GG-----TTT---T-AG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCCAACTCA----CCAATA--CATATGC-------------------------------------------------AA-----AA-G--GCATTGCAATTTGGTTAGGCTGCCGCGTGT-------------------------------------------GTG------CGAGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droRho1
ACAAAAATCAATTTTCGCGCT-----------------------------CG-GA---------------------AAAA-A-ATCAA--------------------CAGCAAATTGCAAGGTAGAT----GGCTTAATTGT-------TGGCAA-----------------ATTAAAATGCGA-AAGT------------------------------TAGT--TG-----TTT---T-TG---GG-------------TTTTAT----------TTGTGGTCTGTTTTTCCAACGCA----CCAACA--CCAAC---------------------------------------------------AC-----GTAAATACATTGCAATTTGGTTT-GCGCCCGCGTGT-------------------------------------------GTG------TGAGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droFic1
A---AAATCAATTTTCGCGAT-----------------------------CGTGA---------------------AACA-A-ATCGG--------------------CAGCAAATTGCAAGGTAGAT------------AGT-------TAGGAA-----------------ATTAAAATTCGA-AAGT------------------------------TAAT--GG-----TTT---T-TG---GT-------------TTTTAT----------TTGTGGTCTGTTTTTCG-ATGTA----CCAATA--CAGAA---------------------------------------------------GCT----GG-G--CAATTGCAATTTGGTTAGGCGTCCGCTTGTG------TGTGTGA------------GCGA-----GTGCGAGTGTA------TTCGTGTGCGTGCCAG------------CTGTA------------TTCCGTACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
droKik1
ACAAAAATCAATTTTCGCGCT-----------------------------CGTGC---------------------AAAGCA-AGAAG--------------------CAAGCAGATAAAAGGTATAT----GTTTGCCTGGT-------TGAAAT-----------------GTGAAAATGCAC-AAAAT---------------------TGGAAAGCCC-----------------G-TGATTAC--------------TTTAG----------TGCTAATGTGTTTTTCC-ACGCA----CCAACA--CAGGC---------------------------------------------------GC-----AA-G--GCGCTGCAATTTGGCTGGGCGCGC-----------------------------------------------TTGTG------TGTGTGTGCGTGCCAG------------C-------------------------------CAGSizeHit CountTotal NormTotal
No Reads
droAna3
ACAAAAATCAATTTGCGCGCTGTTTTC-----------------------CCACAAGCCAGCCCGTACCAGGCCCCAAAAAA-GAAAA--------------------CA-CTAGTTAAAAGGTACAT----G--------TT-------TGGCGAGGTTTTCCGTCGTTTACATCAAAGTGCGT-G-------------------------TGGAAAGCTT-----------------------------------------GGGA----------TTGTGGTCTGTTTCTCCCA--CA----CCAACG--CAAGC---------------------------------------------------GT-----CG-G--TCAATGCAATTTG-------------------------------------------------------TGGCCTTG------CGTGTGTTAGTGCCAG------------CTGTA------------TGCC--ACT-GTACTCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTGCCAG------------CTGTA------------TGCC--............1911.001100000
.........................................................................................................................................................................................................................AGCTT-----------------------------------------GGGA----------TTGTGGTCTGTT.............................................................................................................................................................................................................................................2111.001100000
...........TTTGCGCGCTGTTTTC-----------------------CCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................T-G-------------------------TGGAAAGCTT-----------------------------------------GGGA----------TTGTG....................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................TG-------------------------------------------------------TGGCCTTG------CGTGTGTGC......................................................1990.111100000
droBip1
ACAAAAATCAATTTGCGCGCTGTTTTG-----------------------CCACAAGCCAGCCCGTGCCAGGCCCCAAAA-A-AGAAA--------------------ATACTAGTTAAAAGGTACAT----G--------TT-------TGGCGAGATTTTCCACCTTTAACATCAAAGTGCGT-G-------------------------TGGAAAGCTT-----------------------------------------GGGC----------TTGTGGTCTGTTTCTCCCA--CA----CCAACA--CAAGC---------------------------------------------------GTCGGTCAA------AATGCAATTTGTG---G------C-------------------------------------------TTGCGTG------TGTGTGTTAGTGCCAG------------CTGTA------------TGCC--ACT-GTACTCACSizeHit CountTotal NormTotal
No Reads
dp5
ACAAAAATCAATTT-CGAGCTGCTTTTCTGGCTTTCTAAGAGTGTCTCCGCGTGC--------------------TAAAACAAATAGC--------------------CAG--AGTTGAAAGGTAGTT----CCTCC---GTT---TAGTTGAAGT---TT-----------CTCCAAAATGCTT-GCAATGCCTCCCATCCCCACCCCCCTTAAAAAGGTG-----------------------------------------TGCA----------TTGTGGGCTGATTTCCCCA--CA----C---------------------------------------------------------------GA-----AC-A--GCATTGCAATTAATATA----------------------TGTAGGTGTGTGT----GTTGGGTGAAGGGGTATATGTGCATGTACATG-GCGTGCCAG------------CTGTA------------TTTCCCATT-CTACTCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....AATCAATTT-CGAGCTGCTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
......ATCAATTT-CGAGCTGCTTTTCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................CAAATAGC--------------------CAG--AGTTGAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
droPer2
T-----------TTCCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---ATT---T-GCATTGT-------------GTTTTGTCG------TTGCGGCTGCGTTT-TCCA-TATA----CA----------------------T--------------------------TGCGCACACAGACGC-----GCACACAGAATGCAATCAGCCTATGTCTATGCGTGTGTGTGTGTGTGTGT------------GTGC-----GTGTGTGTGTG------TGTGTGTGTTT---------------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGT------------GTGC-----GTGT............................................................................19200.051001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT------------GTGC-----GTGTGTGTGTG------TGT............................................................22200.051010000
droWil2
AAAAAAATCAATTTTCACGCTGCCGTT-----------------------TGAGA---------------------AACA-A-ATTCA--------------------CTGAAAAGCGTTAATTATAA------------AGG-------TAGCTT-----------------CCTAATTTGGTT-CAAAT---------------------A---------AT--GAAT---TTT---T-CCTTAAATATAATTTCTTATTCTCAT----------TTGCCAATTTTTT-------TCA----CC------CATAA--------GCATTGCAATTTGAAATATTTTTATATATGTATGTACACAC---------A--T--GCACACC----TATGCATGCGTCCACATA----------------------------TAG-----GTATGCATGTA------TGTGTGTGTGTACGGACTCACATGCACGCTATACAACGAAAATTTTACCCAGCTGCTGCTCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGGACTCACATGCACGCTATACAAC..........................2811.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGACTCACATGCACGCTAT...............................2111.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA------TGTGTGTGTGTACGGA...............................................2011.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTA------TGTGTGTGTGTACG.................................................1920.50101000
droVir3
TAGGTATTTGAAAGTCGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTA---------------------T---------GC--A-GT---GTT---T-CTATTGA-------------TTTTAT----------TT-TAGTCTGTTTTGCTTATCCGCTCTCCATTA--TTTAG---------ATATG--------------------------------CAT---------A--T--GTATTGC--------TG------TGCGTGTGCGAGTGTGTGTGT------------GTGT-----GTGTGTGTGTG------TG--TGTGTGTGTGTT------------CTTCA------------TGTGTTGCT-TCAATCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GTGTGTGTGTG------TG--TGTGTGT....................................................21200.459000000000000000000000000000000000000000000000000000000000000090
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG------TG--TGTGTGTGTGTT------------CTTC...............................2230.331000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................TG------TGCGTGTGCGAGTGTGTG........................................................................................................20140.071000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG------TG--TGTGTGTGTGTT------------CT.................................26200.051000000010000000000000000000000000000000000000000000000000000000
droMoj3
AATGCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATAATTT---------------------T---------TT--TGTT---TTT---T-TTGTTTT-------------T---GTTTT------TTTGTTATTCGTTTTAGCAAGTT-----TAATTAACCAAATGTAAAATAGTATTG--------------------------------TAT---------AT-G--TTATGAGTGTTTCCTTGTGTGTGCGCGTGTGAGAATGTGTATGT------------GTGT-----GTGTCCATGTG------TTTGTGTGTGTGTGAG------------T-------------------------------TATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACAAATTCGGGTCTCGCAA--------------------------------------------------------A-AT-C-ATAAATATATATTTAATCAATCGAAAAGAAAATTGGAAGGCCAAC----AAAATTGTGCC-------TTGACC-----------------AGAAA----------GTA---------------------T---------T----------------------------------------------GAAAAGTGCGTGCGTA----------------------------------------------------------------------------------------------------CGTCTCTTGTCTGTGTGTGTGCGCGCG------TGTGTGTGTGTGTGTGTATGTGC-----GTGTGAGTGTG------TGTGTGTGTGTGCGAG-----------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTATGTGC-----GTG.............................................................................19200.05101

Generated: 05/18/2015 at 10:24 AM