ID:

dsi_8923

 Coordinate:

2r:13617972-13618246 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.1 -9.0 -8.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
MDG1_LTRLTRGypsy+
mature
  1. 2r:10555941-10555958 +
  2. dsi_8923  2r:13617999-13618016 +
  3. node_106074:105-122 -
star
  1. 2r:10556017-10556039 +
  2. dsi_8923  2r:13618075-13618097 +
  3. node_106074:24-46 -

Sense Strand Reads

CATATTGCAGAATTTGCTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACTAAGATCAGTTATAAATCAGGAATAGATCTGGAATGTACACTCGCTTAATAAAAACCAAATAAAGATAAAATGACCAACTGCGTTTTGAGACTTTATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACACATTGTTAATCTATTAGTAATGACAACTTTTACAAGCTCGAAACCGAAATGAACATCGGCAGCAATTGAAATATAGTAATATAATGGAATTCCCCTTCATTATATTGTTAACGTTATAAATATGGCACATGACCAACGCTTGATTTCATTACTAAACAGTCACTTCAGTCGCGTAC
*****************************************************************************..............((((..(((((....................(((((((.(((((((........)))))))...)))))))...)))))))))..******************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 O002
Head
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.............................................................................AAATCAGGAATAGATCTG........................................................................................................................................................................................................................................................................................ 18 0 3 3.33 10 5 5 0 0 0 0 0 0 0 0 0
............TTTGCTAGTGTCAGCACTTGGC..................................................................................................................................................................................................................................................................................................................................................... 22 0 4 3.00 12 12 0 0 0 0 0 0 0 0 0 0
.......CAGAATTTGCTAGTGTCAGCAC.......................................................................................................................................................................................................................................................................................................................................................... 22 0 4 3.00 12 0 12 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GACTTTATTAACTACATCAGAAG....................................................................................................................................................................................................... 23 0 3 3.00 9 3 6 0 0 0 0 0 0 0 0 0
.........GAATTTGCTAGTGTCAGC............................................................................................................................................................................................................................................................................................................................................................ 18 0 4 3.00 12 12 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AACCAAATAAAGATAAAA................................................................................................................................................................................................................................................ 18 0 4 2.50 10 0 10 0 0 0 0 0 0 0 0 0
............................................GATCTGCCTGTAGACCACACT...................................................................................................................................................................................................................................................................................................................... 21 0 5 2.00 10 10 0 0 0 0 0 0 0 0 0 0
..............................................TCTGCCTGTAGACCACAC....................................................................................................................................................................................................................................................................................................................... 18 0 5 2.00 10 0 10 0 0 0 0 0 0 0 0 0
....................TGTCAGCACTTGGCTGTCACAA............................................................................................................................................................................................................................................................................................................................................. 22 0 3 2.00 6 6 0 0 0 0 0 0 0 0 0 0
............................CTTGGCTGTCACAAGAGA......................................................................................................................................................................................................................................................................................................................................... 18 0 3 1.67 5 0 5 0 0 0 0 0 0 0 0 0
.......................................................................................TAGATCTGGAATGTACAC.............................................................................................................................................................................................................................................................................. 18 0 3 1.67 5 0 5 0 0 0 0 0 0 0 0 0
.............................................................................AAATCAGGAATAGATCTGGA...................................................................................................................................................................................................................................................................................... 20 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0
.............................................................................AAATCAGGAATAGATCTGGAATGT.................................................................................................................................................................................................................................................................................. 24 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0
....................................................................................GAATAGATCTGGAATGTACAC.............................................................................................................................................................................................................................................................................. 21 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0
......................TCAGCACTTGGCTGTCACAAGAGA......................................................................................................................................................................................................................................................................................................................................... 24 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0
.......................................CAAGAGATCTGCCTGTAGACC........................................................................................................................................................................................................................................................................................................................... 21 0 5 1.40 7 0 0 7 0 0 0 0 0 0 0 0
.....................................................................TCAGTTATAAATCAGGAATAGATC.......................................................................................................................................................................................................................................................................................... 24 0 5 1.40 7 0 7 0 0 0 0 0 0 0 0 0
.....................................................................TCAGTTATAAATCAGGAATAGA............................................................................................................................................................................................................................................................................................ 22 0 5 1.40 7 0 7 0 0 0 0 0 0 0 0 0
..................................................................................AGGAATAGATCTGGAATG................................................................................................................................................................................................................................................................................... 18 0 3 1.33 4 0 0 0 0 3 0 0 1 0 0 0
......................................................................................ATAGATCTGGAATGTACACTC............................................................................................................................................................................................................................................................................ 21 0 3 1.33 4 0 0 3 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................AAGCTCGCAACCGAA................................................................................................................................ 15 1 12 1.25 15 0 0 0 0 0 0 0 0 15 0 0
...........................................AGATCTGCCTGTAGACCACACT...................................................................................................................................................................................................................................................................................................................... 22 0 5 1.20 6 6 0 0 0 0 0 0 0 0 0 0
..............................................TCTGCCTGTAGACCACACTAAGATCAG.............................................................................................................................................................................................................................................................................................................. 27 0 5 1.20 6 5 0 0 0 0 0 0 0 0 1 0
...................................................................GATCAGTTATAAATCAGGAAT............................................................................................................................................................................................................................................................................................... 21 0 5 1.20 6 5 0 0 1 0 0 0 0 0 0 0
.....................................CACAAGAGATCTGCCTGTAGACCACAC....................................................................................................................................................................................................................................................................................................................... 27 0 5 1.20 6 5 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................ATGACCAACTGCGTTTTGAGAC........................................................................................................................................................................................................................... 22 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
..............................TGGCTGTCACAAGAGATCT...................................................................................................................................................................................................................................................................................................................................... 19 0 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0
..............................TGGCTGTCACAAGAGATC....................................................................................................................................................................................................................................................................................................................................... 18 0 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TACAAGCTCGAAACCGAAATGAACATC....................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................TCTGGAATGTACACTCGC.......................................................................................................................................................................................................................................................................... 18 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGACTTTATTAACTACATCAG.......................................................................................................................................................................................................... 21 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
.......................................................AGACCACACTAAGATCAGTTA........................................................................................................................................................................................................................................................................................................... 21 0 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................AAACAGTCACTTCAGTCGCG... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................TAGACCACACTAAGATCAG.............................................................................................................................................................................................................................................................................................................. 19 0 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................GAACATCGGCAGCAATTGAAA......................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................CTGGAATGTACACTCGCTTAA...................................................................................................................................................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0
.....................................................................................AATAGATCTGGAATGTACACTCGC.......................................................................................................................................................................................................................................................................... 24 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................AAACAGTCACTTCAGTC...... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................TGTACACTCGCTTAATAAAAACCAAA........................................................................................................................................................................................................................................................... 26 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
....................................................TGTAGACCACACTAAGATCAGTTATA......................................................................................................................................................................................................................................................................................................... 26 0 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0
...............................GGCTGTCACAAGAGATCTGCC................................................................................................................................................................................................................................................................................................................................... 21 0 5 1.00 5 5 0 0 0 0 0 0 0 0 0 0
..............................................TCTGCCTGTAGACCACACTAAGATC................................................................................................................................................................................................................................................................................................................ 25 0 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0
...................................................CTGTAGACCACACTAAGATCA............................................................................................................................................................................................................................................................................................................... 21 0 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTTTTACAAGCTCGAAACCGA................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................TGAACATCGGCAGCAATTGAAATATAG.................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................ATAGATCTGGAATGTACACT............................................................................................................................................................................................................................................................................. 20 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0
..........................................................................................ATCTGGAATGTACACTCGCTTAAT..................................................................................................................................................................................................................................................................... 24 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0
.........................................AGAGATCTGCCTGTAGAC............................................................................................................................................................................................................................................................................................................................ 18 0 5 0.60 3 0 0 0 0 0 0 3 0 0 0 0
.................................................................................CAGGAATAGATCAGGAATGTACAC.............................................................................................................................................................................................................................................................................. 24 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATCAGAAGTATTGGAATTCTA.......................................................................................................................................................................................... 21 0 4 0.50 2 0 0 0 0 0 0 0 0 0 0 2
......................................ACAAGAGATCTGCCTGTAGACC........................................................................................................................................................................................................................................................................................................................... 22 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0
......................................ACAAGAGATCTGCCTGTAGA............................................................................................................................................................................................................................................................................................................................. 20 0 5 0.40 2 0 0 0 0 0 0 2 0 0 0 0
..TATTGCAGATTTTGCTACTGTCAGCA........................................................................................................................................................................................................................................................................................................................................................... 26 2 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0
.....................................CACAAGAGATCTGCCTGTAGA............................................................................................................................................................................................................................................................................................................................. 21 0 5 0.40 2 0 0 1 0 0 0 0 1 0 0 0
.....................................CACAAGAGATCTGCCTGTAGACCA.......................................................................................................................................................................................................................................................................................................................... 24 0 5 0.40 2 0 0 0 0 0 0 2 0 0 0 0
..............................................TCTGCCTGTAGACCACACTAA.................................................................................................................................................................................................................................................................................................................... 21 0 5 0.40 2 0 0 1 0 0 1 0 0 0 0 0
..................................................................................AGGAATAGATCTGGAATGTACA............................................................................................................................................................................................................................................................................... 22 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................AATCAGGAATAGATCTGGAAT.................................................................................................................................................................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................AGGAATAGATCTGGAAT.................................................................................................................................................................................................................................................................................... 17 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................CTGGAATGTACACTC............................................................................................................................................................................................................................................................................ 15 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
........................AGCACTTGGCTGTCACAAGAGATCT...................................................................................................................................................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................ATGACCAACTGCGTTTTG............................................................................................................................................................................................................................... 18 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................AATAGATCTGGAATGTACACT............................................................................................................................................................................................................................................................................. 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTGAGACTTTATTAACTACAT............................................................................................................................................................................................................. 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................CTGGAATGTACACTCGCTTAATAA................................................................................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TGGCTCAGGACCAACGCT.................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................TGACCAACTGCGTTTTGAGAC........................................................................................................................................................................................................................... 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................CTGGAATGTACACTCGCTTAATAAA.................................................................................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................ACCAACTGCGTTTTGAGACTT......................................................................................................................................................................................................................... 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................AACTGCGTTTTGAGACTTTATTAAC.................................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................ATAGATCTGGAATGGACACTC............................................................................................................................................................................................................................................................................ 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACTACATCAGAAGTATTG.................................................................................................................................................................................................. 18 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................TGACCAACTGCGTTTTGAGA............................................................................................................................................................................................................................ 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................CTGGAATGTACACTCGCTTAATAAAA................................................................................................................................................................................................................................................................. 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................ATCTGGAATGTACACTCGCTTAATAAAA................................................................................................................................................................................................................................................................. 28 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................TAAATCAGGAATAGATCTGGAATG................................................................................................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................TGGAATGTACACTCGCTTAATAAAAA................................................................................................................................................................................................................................................................ 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..............................................TCTGCCTGTAGACCACACTAAGTTCA............................................................................................................................................................................................................................................................................................................... 26 1 6 0.33 2 0 0 0 0 0 1 0 0 1 0 0
...................................................................................GGAATAGATCTGGAATG................................................................................................................................................................................................................................................................................... 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................TCAGAAGTATTGGAATTCTAATTAAC.................................................................................................................................................................................... 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..............TGCTAGTGTCAGCACTTGGCT.................................................................................................................................................................................................................................................................................................................................................... 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................TTGATTCGATTACTAAGCAGT................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
..TATTGCAGAATTTGCTAGTGTCAGC............................................................................................................................................................................................................................................................................................................................................................ 25 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
.......................................CAAGAGATCTGCCTGTGGA............................................................................................................................................................................................................................................................................................................................. 19 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................CTCTTCAGTCGCGTA. 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
........................................................................GTTATAAATCAGGAATAGATC.......................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.........................................AGAGATCTGCCTGTAGACC........................................................................................................................................................................................................................................................................................................................... 19 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
..............................................TCTGCCTGTAGACCACACTAAGATCA............................................................................................................................................................................................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
...............................................CTGCCTGTAGACCACACTAAG................................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
......................................ACAAGAGATCTGCCTGTAGACCA.......................................................................................................................................................................................................................................................................................................................... 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
........................................AAGAGATCTGCCTGTAGACCA.......................................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
............................................GATCTGCCTGTAGACCACACTAA.................................................................................................................................................................................................................................................................................................................... 23 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
..........................................GAGATCTGCCTGTAGACCA.......................................................................................................................................................................................................................................................................................................................... 19 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
................................GCTGTCACAAGAGATCTGCCT.................................................................................................................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
............................................GATCTGCCTGTAGACCACACTAAG................................................................................................................................................................................................................................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................AAGATCAGTTATAAATCAGGA................................................................................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
................................................................TGGGATCAGTTATAAATCAGG.................................................................................................................................................................................................................................................................................................. 21 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
.............................TTGGCTGTCACAAGAGATCTG..................................................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
..................AGTGTCAGCACTTGGCTG................................................................................................................................................................................................................................................................................................................................................... 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................TCACACTAAGATCAGTTATAAATC..................................................................................................................................................................................................................................................................................................... 24 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
....................................TCACAAGAGATCTGCCTG................................................................................................................................................................................................................................................................................................................................. 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................GGACCACACTAAGATCAGTTA........................................................................................................................................................................................................................................................................................................... 21 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
................................................TGCCTGTAGACCACACCAA.................................................................................................................................................................................................................................................................................................................... 19 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
.........................................TGAGATCTGCCTGTAGACCA.......................................................................................................................................................................................................................................................................................................................... 20 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.......................................CAAGAGATCTGCCTGTGGACC........................................................................................................................................................................................................................................................................................................................... 21 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
..........................................GAGATCTGCCTGTAGACCACA........................................................................................................................................................................................................................................................................................................................ 21 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
......................................ACAAGAGATCTGCCTGTAGAC............................................................................................................................................................................................................................................................................................................................ 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
................................................TGCCTGTAGAACACACTAAGATCAGT............................................................................................................................................................................................................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
.................................CTGTCACAGGAGATCTGCCTG................................................................................................................................................................................................................................................................................................................................. 21 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
........................................AAGAGATCTGCCTGTAGACCAC......................................................................................................................................................................................................................................................................................................................... 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
....................................TCACAAGAGATCTGCCTGTAG.............................................................................................................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCGGAGGTATTGGAGTTCTAAT........................................................................................................................................................................................ 22 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0
................................................TGCCTGTAGACCACACGAAGTTCAG.............................................................................................................................................................................................................................................................................................................. 25 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
................................................................TAAGTTCAGTTATAAATCAGGAATA.............................................................................................................................................................................................................................................................................................. 25 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
................................................TGCCTGTAGACCACACTAAGTTCAGTCA........................................................................................................................................................................................................................................................................................................... 28 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0
................................................TGCCTGTAGACCACACTAAGTTCAGTCC........................................................................................................................................................................................................................................................................................................... 28 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
................................................TGCCTGTAGACCACACTAAGT.................................................................................................................................................................................................................................................................................................................. 21 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0
................................................TGCCTGTAGACCACACGAAGTTCAGTTA........................................................................................................................................................................................................................................................................................................... 28 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
..............................................TCTACCTGTAGACCACACGAAGTTCAG.............................................................................................................................................................................................................................................................................................................. 27 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................TGGATCTGGAGTGTGCACTCG........................................................................................................................................................................................................................................................................... 21 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................ATGAACATCGACAGCA................................................................................................................ 16 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................ATGGCTCAGGACGAACGCT.................................... 19 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................CTGGCACAGGACGAACGCT.................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................TACACTCGTTTAACAAAA................................................................................................................................................................................................................................................................. 18 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................GTAAGATCATGGAATTACC.................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................AAAATGACCCAGTGCGT................................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0
........................................AAGGGATCTGACTGTA............................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GTATAACGTCTTAAACGATCACAGTCGTGAACCGACAGTGTTCTCTAGACGGACATCTGGTGTGATTCTAGTCAATATTTAGTCCTTATCTAGACCTTACATGTGAGCGAATTATTTTTGGTTTATTTCTATTTTACTGGTTGACGCAAAACTCTGAAATAATTGATGTAGTCTTCATAACCTTAAGATTAATTGATGTGTAACAATTAGATAATCATTACTGTTGAAAATGTTCGAGCTTTGGCTTTACTTGTAGCCGTCGTTAACTTTATATCATTATATTACCTTAAGGGGAAGTAATATAACAATTGCAATATTTATACCGTGTACTGGTTGCGAACTAAAGTAATGATTTGTCAGTGAAGTCAGCGCATG
*******************************************************************************************************************************************************************************************************..............((((..(((((....................(((((((.(((((((........)))))))...)))))))...)))))))))..***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 O002
Head
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 M023
head
 M053
female body
 GSM343915
embryo
 M025
embryo
..ATAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 26 0 4 33.25 133 94 0 0 3 31 2 1 2 0 0 0 0 0 0
....AACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 24 0 4 7.25 29 10 12 0 1 6 0 0 0 0 0 0 0 0 0
...TAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 25 0 4 5.50 22 16 0 0 0 6 0 0 0 0 0 0 0 0 0
GTATAACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 25 0 4 5.25 21 0 0 0 4 1 5 6 4 1 0 0 0 0 0
..............ACGATCACAGTCGTGAAC....................................................................................................................................................................................................................................................................................................................................................... 18 0 4 3.00 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0
.........CTTAAACGATCACAGTCGTGAACCG..................................................................................................................................................................................................................................................................................................................................................... 25 0 4 3.00 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0
.......GTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 21 0 4 3.00 12 0 12 0 0 0 0 0 0 0 0 0 0 0 0
...........TAAACGATCACAGTCGTGAACC...................................................................................................................................................................................................................................................................................................................................................... 22 0 4 3.00 12 0 0 12 0 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGATTC................................................................................................................................................................................................................................................................................................................... 22 0 5 2.00 10 0 10 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GAAATAATTGATGTAGTCTTC....................................................................................................................................................................................................... 21 0 3 2.00 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATGTAGTCTTCATAACCTTAAGAT.......................................................................................................................................................................................... 24 0 3 2.00 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0
...............................................GACGGACATCTGGTGTGAT..................................................................................................................................................................................................................................................................................................................... 19 0 5 2.00 10 0 10 0 0 0 0 0 0 0 0 0 0 0 0
.AATAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 27 1 4 1.75 7 4 0 0 0 3 0 0 0 0 0 0 0 0 0
...................................................................................CCTTATCTAGACCTTACATGTGA............................................................................................................................................................................................................................................................................. 23 0 3 1.67 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ATTTTACTGGTTGACGCAAAACTCT............................................................................................................................................................................................................................ 25 0 3 1.67 5 0 0 0 3 0 0 1 1 0 0 0 0 0 0
..........................GTGAACCGACAGTGTTCTCTAG....................................................................................................................................................................................................................................................................................................................................... 22 0 3 1.67 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AGTCCTTATCTAGACCTTACAT................................................................................................................................................................................................................................................................................. 22 0 3 1.67 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGTAGTCTTCATAACCTTAAGAT.......................................................................................................................................................................................... 23 0 4 1.50 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................AACGATTTGTCAGTGA............ 16 1 2 1.50 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0
..........................................................................................................................................................................GTCTTCATAACCTTAAGAT.......................................................................................................................................................................................... 19 0 4 1.50 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CTCTAGACGGACATCTGGTGT........................................................................................................................................................................................................................................................................................................................ 21 0 5 1.40 7 0 0 6 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................TTACTGGTTGACGCAAAACTC............................................................................................................................................................................................................................. 21 0 3 1.33 4 0 3 0 0 0 0 0 0 0 1 0 0 0 0
.........................................TCTCTAGACGGACATCTGGTG......................................................................................................................................................................................................................................................................................................................... 21 0 5 1.20 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0
......................................TGTTCTCTAGACGGACATCT............................................................................................................................................................................................................................................................................................................................. 20 0 5 1.20 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0
......................AGTCGTGAACCGACAGTGTTCTCT......................................................................................................................................................................................................................................................................................................................................... 24 0 3 1.00 3 0 0 0 0 0 1 0 0 2 0 0 0 0 0
................................................................................................................................................................................................TTGATGTTTAACAATTAGATAATCAT............................................................................................................................................................. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATCTAGACCTTACATGTGAGCGAAT....................................................................................................................................................................................................................................................................... 25 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
....................................................ACATCTGGTGTGATTCTAGTCAAT........................................................................................................................................................................................................................................................................................................... 24 0 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0
...................................CAGTGTTCTCTAGACGGACATC.............................................................................................................................................................................................................................................................................................................................. 22 0 5 1.00 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCTGGTGTGATTCTAGTCAATATT........................................................................................................................................................................................................................................................................................................ 24 0 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TGGTTGCGACCTAAAGTAATGATT..................... 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................GTTGACGCAAAACTCTGAAATAAT.................................................................................................................................................................................................................... 24 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTACTGGTTGACGCAAAACTCT............................................................................................................................................................................................................................ 23 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGACCTTACATGTGAGCGAAT....................................................................................................................................................................................................................................................................... 21 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GCGTGTACTGGTAGGGAACTA................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................................CGAACTAAGCTAATGATTCGTC................. 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................CTCTGAAATAATTGATGTAGTC.......................................................................................................................................................................................................... 22 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.....ACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 23 0 4 1.00 4 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AAAACTCTGAAATAATTGATGTAGTCT......................................................................................................................................................................................................... 27 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................AATGATTTGTCAGTG............. 15 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GGTTGACGCAAAACTCTGAAATAAT.................................................................................................................................................................................................................... 25 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ACTCTGAAATAATTGATGT.............................................................................................................................................................................................................. 19 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTTTACTGGTTGACGCAAAACTCTG........................................................................................................................................................................................................................... 25 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ACTGGTTGACGCAAAACTC............................................................................................................................................................................................................................. 19 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
.............................AACCGACAGTGTTCTCTAGAC..................................................................................................................................................................................................................................................................................................................................... 21 0 5 1.00 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TGCCTTCGTTAACATTATATCAT.................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TTCGAGCTTTGGCTTTACTTG.......................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................GGTTGACGCAAAACTCTGAAAT....................................................................................................................................................................................................................... 22 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................AGCGAATTATTTTTGGTTTAT......................................................................................................................................................................................................................................................... 21 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTACTGGTTGACGCAAAACT.............................................................................................................................................................................................................................. 21 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGATTCAAGT............................................................................................................................................................................................................................................................................................................... 26 1 6 0.83 5 0 0 0 3 0 0 2 0 0 0 0 0 0 0
.TATAACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 24 0 4 0.75 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GTAGTCTTCATAACCTTA.............................................................................................................................................................................................. 18 0 4 0.75 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0
GTATAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 28 0 4 0.75 3 0 0 0 0 0 2 1 0 0 0 0 0 0 0
..................................................................................................................................................................TTGATGTAGTCTTCATAACCTTAAGAT.......................................................................................................................................................................................... 27 0 3 0.67 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................CTGGTTGACGCAAAACTCTGA.......................................................................................................................................................................................................................... 21 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2
............................................................................ATTTAGTCCTTATCTAGACCTTACATGT............................................................................................................................................................................................................................................................................... 28 0 3 0.67 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0
........................................................CTGGTGTGATTCAAGTCAATATTTAGT.................................................................................................................................................................................................................................................................................................... 27 1 6 0.67 4 0 0 0 2 0 1 1 0 0 0 0 0 0 0
............................................CTAGACGGACATCTGGTGTGATTCAAGT............................................................................................................................................................................................................................................................................................................... 28 1 6 0.67 4 0 0 0 2 0 2 0 0 0 0 0 0 0 0
..............................................................................TTAGTCCTTATCTAGTCCTTACAT................................................................................................................................................................................................................................................................................. 24 1 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..ATAACGTCTTAAACGATCACAGTCG............................................................................................................................................................................................................................................................................................................................................................ 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATAACGTCTTAAACGATCACAGTCT............................................................................................................................................................................................................................................................................................................................................................ 25 1 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
....AACGTCTTAAACGATCACAGTCG............................................................................................................................................................................................................................................................................................................................................................ 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................ATACCGGGTACTGCTTCCGAAC.................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................ACGATTTGTCAGTGAA........... 16 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................ACGGACATCTGGTGTGATTCAAGT............................................................................................................................................................................................................................................................................................................... 24 1 6 0.50 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0
..........CTTAACGATCACAGTCGTGAACCGA.................................................................................................................................................................................................................................................................................................................................................... 25 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGGTTCAAGTCA............................................................................................................................................................................................................................................................................................................. 28 2 6 0.33 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................TGGTTGACGCAAAACTCTGAAATAAT.................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................ATGTGAGCGAATTATTTTTGGTTT........................................................................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................ATTTTACTGGTTGACGCAAAG................................................................................................................................................................................................................................ 21 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................AGTCAATATTTAGTCCTTATCTAGACCT...................................................................................................................................................................................................................................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TCTGAAATAATTGATGTAGTCTTCAT..................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGACCTTACATGTGGGCGAATTATTTTT................................................................................................................................................................................................................................................................ 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................GAACTAAGCTAATGATTCGTC................. 21 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................ATTTTACTGGTTGACGCAAAAC............................................................................................................................................................................................................................... 22 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGAAATAATTGATGTAGTCTTCAT..................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................ACTGGTTGACGCAAAACTCTGAAATAAT.................................................................................................................................................................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GATGTAGTCTTCATAACCTTAAGATT......................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TCCTTATCTAGACCTTACATGTGAG............................................................................................................................................................................................................................................................................ 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATTTCTATTTTACTGGTTGACGCAA.................................................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................CGCAAAACTCTGAAATAATTGATGTAGT........................................................................................................................................................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................GAACCGACAGTGTTCGCTAGACAGGCAT............................................................................................................................................................................................................................................................................................................................... 28 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................ACTGGTTGACGCAAAACTCTGAAATAA..................................................................................................................................................................................................................... 27 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................CAGTCGTGAACCGACAGTGTTCTCT......................................................................................................................................................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................CTGGTTGACGCAAAACTC............................................................................................................................................................................................................................. 18 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................GGTTGACGCAAAACTCTGAAATAATTG.................................................................................................................................................................................................................. 27 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................CTGGTGTGATTCAAGTCAATATTTAGTCCT................................................................................................................................................................................................................................................................................................. 30 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AACTCTGAAATAATTGATGTAGTCT......................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGATTCAAGTCA............................................................................................................................................................................................................................................................................................................. 28 1 6 0.33 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GGTTGACGCAAAACTCTGAAATAATT................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGTTTATTTCTATTTTACTGGTTGACGC.................................................................................................................................................................................................................................... 29 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................GAGCGAATTATTTTTGGTTTATTTCT..................................................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................CTATTTTACTGGTTGACGCAAAACT.............................................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ATTTTACTGGTTGACGCAAAA................................................................................................................................................................................................................................ 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................ACGGACATCTGGTGTGATTCAAGTCAAT........................................................................................................................................................................................................................................................................................................... 28 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TGATGTAGTCTTCATAACCTTAAGATT......................................................................................................................................................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATCTAGACCTTACATGTGAGCGAATTA..................................................................................................................................................................................................................................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATAATTGATGTAGTCTTCATAACCTT............................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TTAGTCCTTATCTAGACCTTACAT................................................................................................................................................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................CTGGTTGACGCAAAACTCTGAAAT....................................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTAGACCTTACATGTGAGCGAATTAT.................................................................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................AAAACTCTGAAATAATTGATGTAGTCTT........................................................................................................................................................................................................ 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TAATTGATGTAGTCTTCATAACCTTAAG............................................................................................................................................................................................ 28 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................TCCTTATCTAGACCTTACATGTGAGCG.......................................................................................................................................................................................................................................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TCAATATTTAGTCCTTATCTAGACC....................................................................................................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGACGCAAAACTCTGAAAT....................................................................................................................................................................................................................... 19 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TCAATATTTAGTCCTTATCTAGACCT...................................................................................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTACTGGTTGACGCAAAACTCT............................................................................................................................................................................................................................ 22 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................TGATGTAGTCTTCATAACCTTAAGAT.......................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................ACTGGTTGACGCAAAACTCTGAAATAATT................................................................................................................................................................................................................... 29 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................CTAGACCTTACATGTGGGCGAATTAT.................................................................................................................................................................................................................................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
GTATAACGTCTTAAACGATCACAGTC............................................................................................................................................................................................................................................................................................................................................................. 26 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...AAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
GTATAACGTCTTAAACGATCACAATCGT........................................................................................................................................................................................................................................................................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACGCAAAACTTTGAAATAATTGATGTAGTCT......................................................................................................................................................................................................... 31 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.TATAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGTTTATTTCTATTTTACTGGCTAACGC.................................................................................................................................................................................................................................... 29 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TCAATATTTAGTCCTTATCTAGTCCT...................................................................................................................................................................................................................................................................................... 26 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..ATAACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 23 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....AACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......CGTCTTAAACGATCACAGTCGTGAACC...................................................................................................................................................................................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATAACGTCTTAAAAGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCAATACTTAGTCCCTATCTAGTCCT...................................................................................................................................................................................................................................................................................... 26 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..AGAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
GTAAAACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 25 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..ATAACGTCTTAAACGATCAAAGTCGTGA......................................................................................................................................................................................................................................................................................................................................................... 28 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..ATAACGTCTTAAACGATCACAGTCGTGAAC....................................................................................................................................................................................................................................................................................................................................................... 30 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AGTCTTCATAACCTTAAGATTAATTGA................................................................................................................................................................................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....ACGTCTTAAACGATCACAGT.............................................................................................................................................................................................................................................................................................................................................................. 20 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................ATTTAGTCCTTATCTAGTCCTTACAT................................................................................................................................................................................................................................................................................. 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..ATAATGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................GAGTTGTCAGTGAACTCAGA..... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..ATAACGTCTTAAACGATCACAGTCGTGA......................................................................................................................................................................................................................................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..TTAACGTCTTAAACGATCACAGTCGT........................................................................................................................................................................................................................................................................................................................................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AACCTTAAGATTAATT..................................................................................................................................................................................... 16 0 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
GTATAACGTCTTAAACGATCACAG............................................................................................................................................................................................................................................................................................................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...TAACGTCTTAAACGATCACAGTCGTG.......................................................................................................................................................................................................................................................................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................AAGTGTTCTCTAGACGGACATCTGGTGT........................................................................................................................................................................................................................................................................................................................ 28 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................AGTCCTTATCTAGTCCTTACATGTGT............................................................................................................................................................................................................................................................................. 26 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................TGTTCTCTAGACGGACATCTG............................................................................................................................................................................................................................................................................................................................ 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................TTCAAGTCAATATTTAGTCCTTATCT............................................................................................................................................................................................................................................................................................ 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................CGACAGTGTTCTCTAGACGGA.................................................................................................................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................GACATCTGGTGTGATTCTA................................................................................................................................................................................................................................................................................................................. 19 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................CAGTGTTCGCTAGACAGACATCTGGT.......................................................................................................................................................................................................................................................................................................................... 26 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGATTCTAGTCT............................................................................................................................................................................................................................................................................................................. 28 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................TCTGGTGTGATTCTAGTCAAT........................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................TGGTGTGATTCTAGTCAATAT......................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................TGAGCGAATTATTTTT................................................................................................................................................................................................................................................................ 16 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................GTTCTCTAGACGGACATCT............................................................................................................................................................................................................................................................................................................................. 19 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................TGTGATTCTAGTCAATATTTAGTCGT................................................................................................................................................................................................................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................ACTGTCGTGAACCGACAGT................................................................................................................................................................................................................................................................................................................................................ 19 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................ACGGACATCTGGTGTGATTCTAGTC.............................................................................................................................................................................................................................................................................................................. 25 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................GTCAATATTTAGTCCTTATC............................................................................................................................................................................................................................................................................................. 20 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................ACCGACAGTGTTCTCTAGACG.................................................................................................................................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................TGATTCTAGTCAATATTTAGTCCTTAT.............................................................................................................................................................................................................................................................................................. 27 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................ACGGACATCTGGTGTGATTCT.................................................................................................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................TGTGATTCTAGTCAATGT......................................................................................................................................................................................................................................................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................GTGATTCTAGTCAATATTTAGTCCTTAT.............................................................................................................................................................................................................................................................................................. 28 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................ACATCTGGTGTGATTCTAGTCAATAT......................................................................................................................................................................................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................AGTGTTCTCTAGACGGACATCTGGT.......................................................................................................................................................................................................................................................................................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................TCTCTAGACGGACATCTGGTGTGATTCA.................................................................................................................................................................................................................................................................................................................. 28 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGCTTCAAGT............................................................................................................................................................................................................................................................................................................... 26 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................AAGTCAATATTTAGTCCT................................................................................................................................................................................................................................................................................................. 18 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................CTGGTGTGATTCAAGTCAATATTTAGTC................................................................................................................................................................................................................................................................................................... 28 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TGCTTCAAGTCAATACTTAGTCCTT................................................................................................................................................................................................................................................................................................ 25 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CGCTAGACGGACATCTGGTGTGCTT.................................................................................................................................................................................................................................................................................................................... 25 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................AGATGGACATCTGGTGTGCTTCAAGT............................................................................................................................................................................................................................................................................................................... 26 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................CTGGTGTGATTCAAGTCAATATTTAGTCT.................................................................................................................................................................................................................................................................................................. 29 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTGCTTCAAGTCAAT........................................................................................................................................................................................................................................................................................................... 30 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................GGTGTGATTCAAGTCAATATTTAGT.................................................................................................................................................................................................................................................................................................... 25 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................GTGATTCAAGTCAATATTTAGTCTTTAT.............................................................................................................................................................................................................................................................................................. 28 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................TCAAGTCAATATTTAGTCCTTAT.............................................................................................................................................................................................................................................................................................. 23 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................CTGGTGTGATTCAAGTCAATATTTAG..................................................................................................................................................................................................................................................................................................... 26 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................AGACGGACATCTGGTGTTGTTCAAGTCA............................................................................................................................................................................................................................................................................................................. 28 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................AACGGACATCTGGTGTGATTCAAGTCAAT........................................................................................................................................................................................................................................................................................................... 29 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................ACGGACATCTGGTGTGATTCAAGTCA............................................................................................................................................................................................................................................................................................................. 26 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................GGTGTGATTCAAGTCAATATTTAGTCCTT................................................................................................................................................................................................................................................................................................ 29 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................CTGGTGTGCTTCAAGTCAATACTTAG..................................................................................................................................................................................................................................................................................................... 26 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................AAACAATTGATGTCGTCCTC....................................................................................................................................................................................................... 20 3 15 0.13 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................AATCATTTGTCAGTG............. 15 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................AACGATTTGTCAGTG............. 15 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................GATTTGTCAGCGAAG.......... 15 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................CAGTAATGCTTTGTCTGTGA............ 20 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TGGATGCGAACTAAA.............................. 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................CGATTTGTCAGTGATG.......... 16 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................CGATTTGTCAGTGAA........... 15 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATTTGGCTTTACTTGTAAC...................................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................................................GATTTGTCAGTGATG.......... 15 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......CGTCTTAAACGGTCATAG............................................................................................................................................................................................................................................................................................................................................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................AATCATTTGTCAGCGAA........... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............CGATCACAGTGGCGAATC...................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................TTACTGTTGAAATTG............................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AGTACTGGTTGGGAAC.................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:13617922-13618296 + dsi_8923 CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCTGGAATGTACACTCGCTTAATAAAAACCAAATAAAGATA-AAATGACCAACTGCGTTTTGAGACTTTATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACACATTGTTAATCTATTAGTAATGACAACTTTTACAAGCTCGAAACCGAAATGAACATCGGCAGCAATTGA----------AATATAG-TAATATAATGGAATTCCCCTTCATTATATTGTTA------ACGTTATAAATATGGCACATGACCAACGCTTGATTTCATTACTAAACAGTCA---CTTCAGTCGCGTAC
droSec2 scaffold_538:3913-4111 + CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCAGGAATGTACACTTGCTGAATAAAAACCAAATAAAGATA-AAATGACCGATTGCGTTTTGAAACTTAATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:7383143-7383364 + CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCTGGAATGTACACTCGCTTAATAAAAACCAAATAAAGATA-AAATGACCAACTGCGTTTTGAGACTTTATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACAGTTTGCTGAA-----------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGGTACTG------------------------A
droEre2 scaffold_4845:12895024-12895223 - AATTCTATA-------------------CCATT----------------------------ACAGAAATGTATGTAATGACTATG-AAA--------------------AT---TTAATACAAA-------------------------------------------------------------------------------------------------------------------------------------------------ACTCGAAATCCGAATGGGCATCGACTGCACTTGAAATATTTGATAAGGCAT-GCATATAAAGGGACTTCCCGTTATAAACTT--TA------TAAATACA--TATGTCGTACGACCAACGCTTGATTTCATTACTAAGCATTCA---CTTCAGTTACGAGC
droYak3 3R:202642-202803 + CATATTGCA-------------------GATTTTATCTAGTGTCAGCACTTTGCGTTCACAAGCGATCGGCCTGCAGGCCACGCT-AAGTTCA----------GTTACAAA---ATAAGAACATATTGA-GATGTACGTGTTATAAAGAAAGACCAAATAAAAATGCAAAGAACTAAATATATTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA---------TTGA
droEug1 scf7180000409672:2171273-2171389 - AAATTAACA-------------------TTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------TGATAAGTAAA-ATAATAATTGGTATTCCCCTATATTGTGTTCTTATCGTTATAGGTATAAATGCAATCATTTACTGTTGCTTCGTTTCAGTACTGAACAGT-------------------
droBia1 scf7180000301754:5196035-5196129 + AATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGACAG-CGCAAAACTGGTATTCCCCTTTATTGTTCCCTTA------TCGGTATAAATGCGACCCGTAGCGGCTGCCTCAGTTCAGT----------------------TACAAAG
droTak1 scf7180000415243:222843-222933 + TGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCCCTATATTGTTTTCTTA------TCGGTATAATTGCGACTCCTAGCTGTTGTTTTATTTCAGTACGA-ACAGCAA---CTTCAGTCGTTTAC
droEle1 scf7180000491214:1387374-1387483 - CAACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGAGAG-TGAAATAATGGTAGTCCCCTTTATTGTTCTTCTG------ACGCTATAAAGGCGACTGGTAGCTGTTGCTTGATTTCAGTACTGAATAGT-T---CTTCAATCG----C
droRho1 scf7180000780084:373827-374073 - CTTTATCATGACTAAGCCACAAATGCTATTTTTTG-CAAATGTTATTAACTGGTTT-TACAGTGGGTTATTTTAACAGAAAT-----------------------G---ATTTAACAGA-------------------------------------------------------------ACTTTTAACATCATATAACCTGCATCACTATAATTAAATTTTCAAT-----------------------------------------------------------------------------------TGATAAGACAACTGAAATAATGGAAGTCCCCTTTATTGTTTT-TTG------TCGGTATAAAGACGACTGGTAGCTGTTTCTTGATTTCAGTACTAAAAAGT-T---CTTCAACAGAAAAC
droFic1 scf7180000453907:106993-107170 + AGTTATGCG-------------------GATTTTG-CTAGTGTCAGCACTCTGCTG-CACGAGCGGTCGGTTTGCCGGCCGCGCA-TAGCTTACGTAAAGTCTTTTATGTT---TCAGTTTTAGTTTTGATTT----------TGAATAAAGAACATTTGAATGTA-AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGGCATTGGCCG--TT------AACATTTA--GACGCAGTAT---------------------------------TATCTC-------TAT
droKik1 scf7180000302066:9177-9306 + AGTTATGTT-------------------GATGTTG-CTAGTGTCAGCACTTTGCTG-CACGAGCGGTCGGCTTGCCGGCCGGACGTTGGCTTATGTAAATTCATTTATGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAGTTTTAATTCAGAAATTCAAT-----------AAAGC-------------------ACTCGCTTGA
droAna3 scaffold_9570:605-657 + CTT-------------------------------G-CGATCGTCAGCATTTCCCACTGTCACGCGGTCGGCCTGCCGACTAAGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000393913:7559-7629 - TGTTATGTG-------------------GATATTG-TTAGTGTCAGCACTTTGCTG-CACGAGCGGTCGGCTTACCGGCCGCACT-TAGCTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:10323117-10323190 + AAAAC---------------------------------------------------------------------------AAACA-CAGATAA----------ATTATAAA---TCAAGCATAGATCAAGCATATATATA------ATATGAGTCAAACGCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAA
droGri2 scaffold_15074:3354738-3354793 - AATATAATA-------------------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATACAACTGCCTTTAATTAATTT------------------------------------------ATTT---------------ATTTATTCA---ATGTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCTGGAATGTACACTCGCTTAATAAAAACCAAATAAAGATA-AAATGACCAACTGCGTTTTGAGACTTTATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACACATTGTTAATCTATTAGTAATGACAACTTTTACAAGCTCGAAACCGAAATGAACATCGGCAGCAATTGA----------AATATAG-TAATATAATGGAATTCCCCTTCATTATATTGTTA------ACGTTATAAATATGGCACATGACCAACGCTTGATTTCATTACTAAACAGTCA---CTTCAGTCGCGTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................AAA---TCAGGAATAGATCTG.............................................................................................................................................................................................................................................................................................................1833.331000005500000000000
...............................TTTG-CTAGTGTCAGCACTTGGC........................................................................................................................................................................................................................................................................................................................................................................................2243.0012000012000000000000
.......CA-------------------GAATTTG-CTAGTGTCAGCAC.............................................................................................................................................................................................................................................................................................................................................................................................2243.0012000001200000000000
............................................................................................................................................................................................GACTTTATTAACTACATCAGAAG...........................................................................................................................................................................................................................2333.00900003600000000000
............................GAATTTG-CTAGTGTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................1843.0012000012000000000000
.......................................................................................................................................................AACCAAATAAAGATA-AAA....................................................................................................................................................................................................................................................................1842.5010000001000000000000
................................................................GATCTGCCTGTAGACCACACT-........................................................................................................................................................................................................................................................................................................................................................2152.0010000010000000000000
..................................................................TCTGCCTGTAGACCACAC..........................................................................................................................................................................................................................................................................................................................................................1852.0010000001000000000000
........................................TGTCAGCACTTGGCTGTCACAA................................................................................................................................................................................................................................................................................................................................................................................2232.00600006000000000000
................................................CTTGGCTGTCACAAGAGA............................................................................................................................................................................................................................................................................................................................................................................1831.67500000500000000000
.........................................................................................................................TAGATCTGGAATGTACAC...................................................................................................................................................................................................................................................................................................1831.67500000500000000000
............................................................................................................AAA---TCAGGAATAGATCTGGA...........................................................................................................................................................................................................................................................................................................2031.67500005000000000000
............................................................................................................AAA---TCAGGAATAGATCTGGAATGT.......................................................................................................................................................................................................................................................................................................2431.67500005000000000000
......................................................................................................................GAATAGATCTGGAATGTACAC...................................................................................................................................................................................................................................................................................................2131.67500005000000000000
..........................................TCAGCACTTGGCTGTCACAAGAGA............................................................................................................................................................................................................................................................................................................................................................................2431.67500005000000000000
...........................................................CAAGAGATCTGCCTGTAGACC..............................................................................................................................................................................................................................................................................................................................................................2151.40770000000000000000
..........................................................................................TCA----------GTTATAAA---TCAGGAATAGATC...............................................................................................................................................................................................................................................................................................................2451.40700000700000000000
..........................................................................................TCA----------GTTATAAA---TCAGGAATAGA.................................................................................................................................................................................................................................................................................................................2251.40700000700000000000
....................................................................................................................AGGAATAGATCTGGAATG........................................................................................................................................................................................................................................................................................................1831.33401000000003000000
........................................................................................................................ATAGATCTGGAATGTACACTC.................................................................................................................................................................................................................................................................................................2131.33431000000000000000
...............................................................AGATCTGCCTGTAGACCACACT-........................................................................................................................................................................................................................................................................................................................................................2251.20600006000000000000
..................................................................TCTGCCTGTAGACCACACT-AAGATCA----------G......................................................................................................................................................................................................................................................................................................................................2751.20600005001000000000
........................................................................................GATCA----------GTTATAAA---TCAGGAAT....................................................................................................................................................................................................................................................................................................................2151.20600005010000000000
.........................................................CACAAGAGATCTGCCTGTAGACCACAC..........................................................................................................................................................................................................................................................................................................................................................2751.20600005000100000000
.........................................................................................................................................................................ATGACCAACTGCGTTTTGAGAC...............................................................................................................................................................................................................................................2231.00300000300000000000
..................................................TGGCTGTCACAAGAGATCT.........................................................................................................................................................................................................................................................................................................................................................................1951.00500005000000000000
..................................................TGGCTGTCACAAGAGATC..........................................................................................................................................................................................................................................................................................................................................................................1851.00500005000000000000
........................................................................................................................................................................................................................................................................TACAAGCTCGAAACCGAAATGAACATC...........................................................................................................................................2711.00100000010000000000
.............................................................................................................................TCTGGAATGTACACTCGC...............................................................................................................................................................................................................................................................................................1831.00300000300000000000
...........................................................................................................................................................................................AGACTTTATTAACTACATCAG..............................................................................................................................................................................................................................2131.00300000300000000000
...........................................................................AGACCACACT-AAGATCA----------GTTA...................................................................................................................................................................................................................................................................................................................................2151.00500005000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGTCA---CTTCAGTCGCG...2011.00100000000001000000
..........................................................................TAGACCACACT-AAGATCA----------G......................................................................................................................................................................................................................................................................................................................................1951.00500000500000000000
............................................................................................................................................................................................................................................................................................GAACATCGGCAGCAATTGA----------AA...................................................................................................................2111.00100000000001000000
..............................................................................................................................CTGGAATGTACACTCGCTTAA...........................................................................................................................................................................................................................................................................................2131.00300003000000000000
.......................................................................................................................AATAGATCTGGAATGTACACTCGC...............................................................................................................................................................................................................................................................................................2431.00300000300000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGTCA---CTTCAGTC......1711.00100000000001000000
....................................................................................................................................TGTACACTCGCTTAATAAAAACCAAA................................................................................................................................................................................................................................................................................2631.00300000300000000000
........................................................................TGTAGACCACACT-AAGATCA----------GTTATA.................................................................................................................................................................................................................................................................................................................................2651.00500005000000000000
...................................................GGCTGTCACAAGAGATCTGCC......................................................................................................................................................................................................................................................................................................................................................................2151.00500005000000000000
..................................................................TCTGCCTGTAGACCACACT-AAGATC..................................................................................................................................................................................................................................................................................................................................................2551.00500000500000000000
.......................................................................CTGTAGACCACACT-AAGATCA----------.......................................................................................................................................................................................................................................................................................................................................2151.00500000500000000000
....................................................................................................................................................................................................................................................................CTTTTACAAGCTCGAAACCGA.....................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................................................................................................................TGAACATCGGCAGCAATTGA----------AATATAG-.............................................................................................................2711.00100000010000000000
........................................................................................................................ATAGATCTGGAATGTACACT..................................................................................................................................................................................................................................................................................................2030.67200200000000000000
............................................................................................................................ATCTGGAATGTACACTCGCTTAAT..........................................................................................................................................................................................................................................................................................2430.67220000000000000000
.............................................................AGAGATCTGCCTGTAGAC...............................................................................................................................................................................................................................................................................................................................................................1850.60300300000000000000
...........................................................................................................................................................................................................ATCAGAAGTATTGGAATTCTA..............................................................................................................................................................................................................2140.50200000000000002000
..........................................................ACAAGAGATCTGCCTGTAGACC..............................................................................................................................................................................................................................................................................................................................................................2250.40220000000000000000
..........................................................ACAAGAGATCTGCCTGTAGA................................................................................................................................................................................................................................................................................................................................................................2050.40200200000000000000
.........................................................CACAAGAGATCTGCCTGTAGA................................................................................................................................................................................................................................................................................................................................................................2150.40211000000000000000
.........................................................CACAAGAGATCTGCCTGTAGACCA.............................................................................................................................................................................................................................................................................................................................................................2450.40200200000000000000
..................................................................TCTGCCTGTAGACCACACT-AA......................................................................................................................................................................................................................................................................................................................................................2150.40210000000100000000
....................................................................................................................AGGAATAGATCTGGAATGTACA....................................................................................................................................................................................................................................................................................................2230.33101000000000000000
.............................................................................................................AA---TCAGGAATAGATCTGGAAT.........................................................................................................................................................................................................................................................................................................2130.33100000000001000000
....................................................................................................................AGGAATAGATCTGGAAT.........................................................................................................................................................................................................................................................................................................1730.33100000000001000000
..............................................................................................................................CTGGAATGTACACTC.................................................................................................................................................................................................................................................................................................1530.33100000010000000000
............................................AGCACTTGGCTGTCACAAGAGATCT.........................................................................................................................................................................................................................................................................................................................................................................2530.33100000000100000000
.........................................................................................................................................................................ATGACCAACTGCGTTTTG...................................................................................................................................................................................................................................................1830.33100000000001000000
.......................................................................................................................AATAGATCTGGAATGTACACT..................................................................................................................................................................................................................................................................................................2130.33110000000000000000
........................................................................................................................................................................................TTGAGACTTTATTAACTACAT.................................................................................................................................................................................................................................2130.33110000000000000000
..............................................................................................................................CTGGAATGTACACTCGCTTAATAA........................................................................................................................................................................................................................................................................................2430.33100000000100000000
..........................................................................................................................................................................TGACCAACTGCGTTTTGAGAC...............................................................................................................................................................................................................................................2130.33100000010000000000
..............................................................................................................................CTGGAATGTACACTCGCTTAATAAA.......................................................................................................................................................................................................................................................................................2530.33100000000100000000
............................................................................................................................................................................ACCAACTGCGTTTTGAGACTT.............................................................................................................................................................................................................................................2130.33110000000000000000
...............................................................................................................................................................................AACTGCGTTTTGAGACTTTATTAAC......................................................................................................................................................................................................................................2530.33100000010000000000
......................................................................................................................................................................................................ACTACATCAGAAGTATTG......................................................................................................................................................................................................................1830.33100000000001000000
..........................................................................................................................................................................TGACCAACTGCGTTTTGAGA................................................................................................................................................................................................................................................2030.33100000010000000000
..............................................................................................................................CTGGAATGTACACTCGCTTAATAAAA......................................................................................................................................................................................................................................................................................2630.33100000000100000000
............................................................................................................................ATCTGGAATGTACACTCGCTTAATAAAA......................................................................................................................................................................................................................................................................................2830.33100000000100000000
...........................................................................................................TAAA---TCAGGAATAGATCTGGAATG........................................................................................................................................................................................................................................................................................................2430.33100000010000000000
...............................................................................................................................TGGAATGTACACTCGCTTAATAAAAA.....................................................................................................................................................................................................................................................................................2630.33100000010000000000
.....................................................................................................................GGAATAGATCTGGAATG........................................................................................................................................................................................................................................................................................................1740.25100000000001000000
............................................................................................................................................................................................................TCAGAAGTATTGGAATTCTAATTAAC........................................................................................................................................................................................................2640.25100000000001000000
.................................TG-CTAGTGTCAGCACTTGGCT.......................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
..TATTGCA-------------------GAATTTG-CTAGTGTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................2540.25100000000100000000
.......................................................................................................GTTATAAA---TCAGGAATAGATC...............................................................................................................................................................................................................................................................................................................2150.20110000000000000000
.............................................................AGAGATCTGCCTGTAGACC..............................................................................................................................................................................................................................................................................................................................................................1950.20100100000000000000
..................................................................TCTGCCTGTAGACCACACT-AAGATCA----------.......................................................................................................................................................................................................................................................................................................................................2650.20100000000010000000
...................................................................CTGCCTGTAGACCACACT-AAG.....................................................................................................................................................................................................................................................................................................................................................2150.20101000000000000000
..........................................................ACAAGAGATCTGCCTGTAGACCA.............................................................................................................................................................................................................................................................................................................................................................2350.20110000000000000000
............................................................AAGAGATCTGCCTGTAGACCA.............................................................................................................................................................................................................................................................................................................................................................2150.20110000000000000000
................................................................GATCTGCCTGTAGACCACACT-AA......................................................................................................................................................................................................................................................................................................................................................2350.20100000000100000000
..............................................................GAGATCTGCCTGTAGACCA.............................................................................................................................................................................................................................................................................................................................................................1950.20100100000000000000
....................................................GCTGTCACAAGAGATCTGCCT.....................................................................................................................................................................................................................................................................................................................................................................2150.20101000000000000000
................................................................GATCTGCCTGTAGACCACACT-AAG.....................................................................................................................................................................................................................................................................................................................................................2450.20100000010000000000
......................................................................................AAGATCA----------GTTATAAA---TCAGGA......................................................................................................................................................................................................................................................................................................................2150.20100000001000000000
.................................................TTGGCTGTCACAAGAGATCTG........................................................................................................................................................................................................................................................................................................................................................................2150.20110000000000000000
......................................AGTGTCAGCACTTGGCTG......................................................................................................................................................................................................................................................................................................................................................................................1850.20110000000000000000
........................................................TCACAAGAGATCTGCCTG....................................................................................................................................................................................................................................................................................................................................................................1850.20110000000000000000
..............................................................GAGATCTGCCTGTAGACCACA...........................................................................................................................................................................................................................................................................................................................................................2150.20100100000000000000
..........................................................ACAAGAGATCTGCCTGTAGAC...............................................................................................................................................................................................................................................................................................................................................................2150.20110000000000000000
............................................................AAGAGATCTGCCTGTAGACCAC............................................................................................................................................................................................................................................................................................................................................................2250.20110000000000000000
........................................................TCACAAGAGATCTGCCTGTAG.................................................................................................................................................................................................................................................................................................................................................................2150.20110000000000000000
....................................................................TGCCTGTAGACCACACT-AAGT....................................................................................................................................................................................................................................................................................................................................................2160.17100000010000000000
droSec2
CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCAGGAATGTACACTTGCTGAATAAAAACCAAATAAAGATA-AAATGACCGATTGCGTTTTGAAACTTAATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................AGGAATAGATCAGGAATG........................................................................................................................................................................................................................................................................................................18200.1022000
.......................................................................................................GTTATAAA---TCAGGAATAGATC...............................................................................................................................................................................................................................................................................................................21180.0610100
...........................................................................................................TAAA---TCAGGAATAGATCAGG............................................................................................................................................................................................................................................................................................................20180.0611000
...ATTGCA-------------------GAATTTG-CTAGTGTCAGC...............................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
dm3
CATATTGCA-------------------GAATTTG-CTAGTGTCAGCACTTGGCTGTCACAAGAGATCTGCCTGTAGACCACACT-AAGATCA----------GTTATAAA---TCAGGAATAGATCTGGAATGTACACTCGCTTAATAAAAACCAAATAAAGATA-AAATGACCAACTGCGTTTTGAGACTTTATTAACTACATCAGAAGTATTGGAATTCTAATTAACTACAGTTTGCTGAA-----------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGGTACTG------------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.................................................TTGGCTGTCACAAGAGATCTG........................................................................................................................................................................................................................................................................................................................................................................212028.805760000000000000000000000000000100000000020000000000000010200000000000000000000000000000000100000000000000010000000000000000000000100000000000040000000000010000000090000000004000000001007004000000000000070000000000000001660002106213000007000000000001000000000000101900060070000008000800000000000020000000000460000000000008501300107000282611100
...................................................................................................................................................................ATA-AAATGACCAACTGCGTTT.....................................................................................................................................................................................................................................................212027.005400000000000000000000000000020000000000000000000000000000000000000000000000000000100000000000000000000020000010400001000000000000000000000000000000000001220000000000030023002000000001001700500000000000000000102000000070130007036110900000000000000500000003000004180000010015020002900030030000000021001000000010000000000014114311300009106036093270
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..........................................................................TAGACCACACT-AAGATCA----------GTT....................................................................................................................................................................................................................................................................................................................................212024.404880000000000000000000000000000000000000003000022000000000000000000000000000000000000000001400000100000000000000000000000000000100000000000000000000000000104000010000233000002000000003860001000000000000000003000000050000000021059320590431000000000009100004020000050000001617000000010004040505000000000020030400160000060000004100000000000000
.......................................................................................................................AATAGATCTGGAATGTACACTC.................................................................................................................................................................................................................................................................................................222024.254850000000000000000000001000010100000000000000002000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800343050010000000000000110000000000000000000000060050700028000000000020500000000000000201008040001030130320005000200002000101600000001000140010002000000030004010582100001390031018800
......................................................................................................................GAATAGATCTGGAATGTACACT..................................................................................................................................................................................................................................................................................................222023.60472000000000000000000000100000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000050000604000000000000001002612000001900000001400000003000001000000137070021600000000004300000000005000005003300130500000000350000000000010004020200000000047500067010000003220015950
..............................................................................................................................CTGGAATGTACACTCGCTTAA...........................................................................................................................................................................................................................................................................................212023.35467000000000000000000000000002000000000000000000100000000000000000000000000000000200000000180000010000000003011001000000000000000000000000000000000000000000010002202600012160302000000000100000000002100000000000000000000000000001000017228010000008004000000010002010001000240100000000002003000000000050011201700010010670014091901900002300067000
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...............................TTTG-CTAGTGTCAGCACTTGG.........................................................................................................................................................................................................................................................................................................................................................................................212022.2544500000000000000000000000000000000002000000300000000000000000000000000000000000000000000001000000000000000000002000000000000002108800000000000250000000000040000000000000002002300000006000010010000000000000000000000000003600003010000012500000000000000000000007000412018000010004000000120000000000110000000700000000000000000000000000004750000
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............................................AGCACTTGGCTGTCACAAGAG.............................................................................................................................................................................................................................................................................................................................................................................212019.6039200000000000000000000080000000000000000030000600000000000000000000000000000000000000000039000000410000000102002000000000000000000000000000000000000000000760000007000000001000000000000001000000000000000000000000000000130000022060059592000000000012004004100000000000100401200000000000204000000000000001000000010000052010140000000000390000
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............................................................................................A----------GTTATAAA---TCAGGAATAGAT................................................................................................................................................................................................................................................................................................................212015.95319000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000100000000000150000000000000000003774010000000000000000000000000120000000504500003022000000500230000003010000190100002222000000012002461601600000100180200004009200041400000010030000000000000
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....................................CTAGTGTCAGCACTTGGCTGTC....................................................................................................................................................................................................................................................................................................................................................................................22202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000002000000000000000000000000000530000002000000000300000000000000000000000000000000000000000000000060000000000000000000000300000000000100000000000000000000000000000000004000000000000000000000000000003100250000
...............................................................................................................................................................................AACTGCGTTTTGAGACTTTAT..........................................................................................................................................................................................................................................21202.95590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000340000000000010000000000000000000000000009003204000000000000031000000000000010000000410000000000000400000000000000000000000000011600000000000000040500
............................................................AAGAGATCTGCCTGTAGAC...............................................................................................................................................................................................................................................................................................................................................................19202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000003000000000000000000000001000071000000201000000000000000010000000030200000000000002000000009000000000100002150000000000000000007000
...................................................................CTGCCTGTAGACCACACT-AAG.....................................................................................................................................................................................................................................................................................................................................................21202.905800000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000013000000000000000000010000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000033902000000100010000000010000020000001000000000011100200000000000000000000000003000000210000010000100010
..............................................................................................................................CTGGAATGTACACTCGCTTAATAAA.......................................................................................................................................................................................................................................................................................25202.9058000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000020000003000000000000000010001813560000000000000000000000000000000000000000000000000000000000000000000000300000000020000000010000000000000000
..................................................................TCTGCCTGTAGACCACACT-A.......................................................................................................................................................................................................................................................................................................................................................20202.855700000000000000000000000000004000000000000000000000000000000000000000000000000000010000005000000100000071801005000000000000000000000000000000000000000000000000000000000000004000000000010020000000000000000000000000000000000002000020000000000000000000000010000000000000000000000000110000000000000000000000000000000000000000000000010
......................................................TGTCACAAGAGATCTGCCTG....................................................................................................................................................................................................................................................................................................................................................................20202.85570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000020000000406080010010000000000020000000020000000000000000000100000003000000006000000000000000000000020100000000000000000000000010000000000500010010000100000000000010000000033010
.........................................................................................................................................................................................................ACATCAGAAGTATTGGAATTCT...............................................................................................................................................................................................................22202.855700000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000001000000000010100000000000000001200000050000000000600000000000000015500003200001000033000
...........................................................................................................................GATCTGGAATGTACACTCGCT..............................................................................................................................................................................................................................................................................................21202.855700000000000000000000000000010000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000002000000000000000000000000000000010001000440000100000000400000000000100000000000000000000000000000000010000000000000000000000000100000001000000000000000000000000000006000000200152010000000021000000000022000
..TATTGCA-------------------GAATTTG-CTAGTGTC..................................................................................................................................................................................................................................................................................................................................................................................................22202.805600000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000001000000000000000000000000000000000000041000000000000000000201000001000000000000000000000000000000100000140000000000000000000002010016000000900000000000000180000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAAAGATA-AAATGACCAACTGCGTT......................................................................................................................................................................................................................................................25202.8056000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000100000010000000200000000000000019000160000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000005340002000
.................................................................................CACT-AAGATCA----------GTTATAAA---TC..........................................................................................................................................................................................................................................................................................................................21202.75550000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000010001010000000000001000000010000100020000000000002100131200000000000502000000060000041200000000000000000720
............................................................................................................................................................................ACCAACTGCGTTTTGAGACT..............................................................................................................................................................................................................................................20202.755500000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000060100000000000000000000000000000001000000002000000000000000000000000005003100000300000000000220000001000100060
.......................................................................................................................AATAGATCTGGAATGTACAC...................................................................................................................................................................................................................................................................................................20202.75550000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000002000000000000000060000000000000010020000000000000310000000000000000000040000002000000000000000000000000010030000000000000200070200100000000201000000000000000000051000000001040010
...........................................................................................................................................................................................AGACTTTATTAACTACATCAGA.............................................................................................................................................................................................................................22202.7054000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000001002200042220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CGTTTTGAGACTTTATTAACT.....................................................................................................................................................................................................................................21202.655300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000002100000010002000000000010000000000000000000000000000040000000000000000000010000101000100000000000000000000001000000000000000000000050000003000000000000000100080
............................................................................................................................ATCTGGAATGTACACTCGC...............................................................................................................................................................................................................................................................................................19202.605200000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500001000100000000000000000300000000000000000000000002000100000101001000000000200020000000010000000000000013000000000000010000000000000000000000000200000070000000000043000
....................................................................................................................................................................TA-AAATGACCAACTGCGTTTTG...................................................................................................................................................................................................................................................22202.555100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000100000000000000000001000000000000000000000000000100000100000003000000000000021000000010000001000003000000000000020340100000000600000000000000000000250000001000000000
.....................................................................................................................................GTACACTCGCTTAATAAAAAC....................................................................................................................................................................................................................................................................................21202.5551000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000401500080180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AGAAGTATTGGAATTCTAATT...........................................................................................................................................................................................................21202.55510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000020022000000030000000000000002000000000000000000000100000000000000000000000000000011701000000000000460000000000001204000030000201300000000000000002000
..........................................TCAGCACTTGGCTGTCACAAG...............................................................................................................................................................................................................................................................................................................................................................................21202.555100000000000000000000000000001000000000000000000000000000000000000000000000000000000000002000000001000000534110000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000081100100000000000000000040000000000000010000000000000000000000000000000000000000040000000000000000000000003000
............................................................................................A----------GTTATAAA---TCAGGAATAGATCTGGAA..........................................................................................................................................................................................................................................................................................................27202.505000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102163000000000000000000000000003010000000000200000000005200000000000000010000000001002000060000000000021110
...........................................................CAAGAGATCTGCCTGTAGA................................................................................................................................................................................................................................................................................................................................................................19202.50500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000200000000000000002202200000010000000000000000000000000000001021000000000100000000000000200000000000000000010000000000084000000000000000000000400000000800000000000000000000000000000001002100
............................................................................................................................ATCTGGAATGTACACTCGCTTA............................................................................................................................................................................................................................................................................................22202.50500000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000008000000000000000000000000000000000000000000000000000010003000000000000000000000000000000000000000000100000000000011120000000000000000000000100880100006010000000050000
................................................................................................................................................................................................TTATTAACTACATCAGAAGT..........................................................................................................................................................................................................................20202.50500000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000300070000000000000200003000000000000000000000000000000000002000005012100000000000010000000000000011000000000000000101000002000000000002000060000000000022000001000000030
.............................AATTTG-CTAGTGTCAGCACTT...........................................................................................................................................................................................................................................................................................................................................................................................21202.505000000000000000000000000000400000001000000000100000000000000000000000000000000000000000000000000000000000311004000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000100010200000020000000000000000000002010020000020000000000040000000000140000
............................................................................................................................................................................................GACTTTATTAACTACATCAGA.............................................................................................................................................................................................................................21202.454900000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000020000000000000000000000000000000000000000000000000002000100000010000000000000000000000000000000000000000001000000340300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AATAGATCTGGAATGTACACTCGCT..............................................................................................................................................................................................................................................................................................25202.404800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000008000000000000000000022500100000000000000000000000000000000000001000000000000000000000000000002020000000002000002000000000020000
..........................................................................TAGACCACACT-AAGATCA----------GT.....................................................................................................................................................................................................................................................................................................................................20202.404800000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000110000010000000000000000000200000000000000006100000000040000000000000000000000002000000100010200000000001200000000001000004100000010000100003000
...............................................................AGATCTGCCTGTAGACCACACT-........................................................................................................................................................................................................................................................................................................................................................22202.354700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000250600000000000000001000000000000000000000000000000000000000000000000000000000061000000000000000000001002000
............................................................................GACCACACT-AAGATCA----------GTTAT..................................................................................................................................................................................................................................................................................................................................21202.35470000000000000000000000000000000000000000000010000000000000000000000000000000000000007000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000042000000010020000010200000000000000000000000000000000000000000000000000070000002100000000000000003040
..............................................................................................................................CTGGAATGTACACTCGCTTAATAAAAA.....................................................................................................................................................................................................................................................................................27202.3547000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000011000108230000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................TGGAATGTACACTCGCTTAATA.........................................................................................................................................................................................................................................................................................22202.354700000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000100000000000000000000000000000000100000000000000000080200009000000000000000000000000000100010000000000000000001000000000000000000000010000001000000000000000000000
....TTGCA-------------------GAATTTG-CTAGTGTCAGCACT............................................................................................................................................................................................................................................................................................................................................................................................26202.354700000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000100000000000005000000105000000000000000000000000000000100000000000000000000000000000000000003020000100000000000000000020000020000
......................................................................................AAGATCA----------GTTATAAA---TCAGGAA.....................................................................................................................................................................................................................................................................................................................22202.354700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000002000200010000000000000000000000000000000001000000016000000000000100000000000000000000000300001040000000000000000212100
.................................................................................................................................................................AGATA-AAATGACCAACTGCG........................................................................................................................................................................................................................................................20202.30460000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200003000000000000100030000000000000000000000000000000000000060000000000000000010010000001000407000003000020000000000000000000000000000000000000200000020000000000015000
.............................................................................................................................TCTGGAATGTACACTCGCT..............................................................................................................................................................................................................................................................................................19202.25450000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000200000000000000000000000000000100000000000000000000020000000000000100000000000000000000020001110000000000010000000010020000022000208000000000000000000000000200000010010000000000010100000100002300
........................................................................................................................ATAGATCTGGAATGTACACTCGC...............................................................................................................................................................................................................................................................................................23202.204400000000000000000000000000010000000000000000000000000000000000000000000000000020000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000030000000000000000000100000000000034010000000010000100000000001000000000000004002000000000000100011200
......................................................TGTCACAAGAGATCTGCCTGTA..................................................................................................................................................................................................................................................................................................................................................................22202.204400000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300013000010000000000000000020000000000000010010003000000200020010000000000000000000010100100002003000000000050000
.............................................................AGAGATCTGCCTGTAGACCA.............................................................................................................................................................................................................................................................................................................................................................20202.20440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000002400008000000000000000000000000000000000000000000000000000001050000020000000000001000010000000000000000000000000000000000000000000200011000000000000000000000000000020900
.............................................................................................................................TCTGGAATGTACACTCGCTTAA...........................................................................................................................................................................................................................................................................................22202.20440000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000100000000000000000000000000000000002000000000000000000000000000000000000010000000000000200000000000000000100000000000000000000002000300000000000000000000000000000000000000300000000000000000000000000100000000000000307000050210000010016000
.......................................................................................................................AATAGATCTGGAATGTACACTCG................................................................................................................................................................................................................................................................................................23202.15430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000060000000000000000000000000000000000000100000000000010004000100100000000000000000000000000000000000001000000000000100000000000000000000000000208000070020000000142000
........................................................TCACAAGAGATCTGCCTGTAGACCACAC..........................................................................................................................................................................................................................................................................................................................................................28202.154300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000001000000000000000000002200049000000000000000000000000000000002000000000000000000000000000000000000000000000000000110000000000100
....................................................................................................................................................................................................................ATTGGAATTCTAATTAACTAC.....................................................................................................................................................................................................21202.1543000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000320016000000000000000000000000000000000000000120005000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000010000
...........................................................................................................................................................................................................................................TTTGCTGAA-----------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGGTACTG------------------------A22202.15430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000038100000000000000000000300000000000100220004000000000010001000000000000000000001000000000000001000000002000000000000030000000101010000000000002200
..................................................................................................................................................................................................ATTAACTACATCAGAAGTATTGG.....................................................................................................................................................................................................................23202.1042000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000001013000000000000000000000000000000010001000000000000000000000000000000000050000203100000000000010002000
................................................................................................................................................................................................................AAGTATTGGAATTCTAATT...........................................................................................................................................................................................................19202.05410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006100020000002020000000000000000000000000000000102000000000000000000000010000000000000030000000002000000000000001630001200000000000010012000000100000000100000000000
................................................................................................................................................................................................TTATTAACTACATCAGAAGTATTGGA....................................................................................................................................................................................................................26202.054100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000081000000010000000000000003005101000000000000000000000001000000000001000000000000000010000000000000010000000010010000001000000001012000
..............................................................................................................A---TCAGGAATAGATCTGGAATGT.......................................................................................................................................................................................................................................................................................................22202.054100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500011000000009000000000020000000000010000010000001000000000000000000000000000000000000000200000000010000000000800
........................................................TCACAAGAGATCTGCCTGTAGA................................................................................................................................................................................................................................................................................................................................................................22202.0541000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000003000000002000000000000000000000000000001101000023000000000000000000000000101000001000000000000000030000000000000000000011000000000001000000000000000
...........................................................................................................................................................................................................................................TTTGCTGAA-----------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGGTA............................18202.054100000000000000000000010000000000000001000010000001570000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000040000000000000100000020000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000
..............................................CACTTGGCTGTCACAAGAGAT...........................................................................................................................................................................................................................................................................................................................................................................21202.05410000000000000000000000000000100000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000000000000000000000002000000000002000000001000000000000000000010000000000000000000000000000060000030000000000001000000000000000000000000000000000002020000000000000000000000000104000005000000000020230
....TTGCA-------------------GAATTTG-CTAGTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................22202.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000020000000010000000010000000000001000000000000000000000000000040000100000000000000000000200000168000000000000000
.......................................................................................................................................................................................................CTACATCAGAAGTATTGGAATT.................................................................................................................................................................................................................22202.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001010200000000201000000000020000100000000200000000000000014500055000001000060000
..............................................................................................................................................................TAAAGATA-AAATGACCAACTGCGT.......................................................................................................................................................................................................................................................24202.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000320916060000000000000000000000000000000000000000000000000000110000000000000100000000000000000010000001030001200
..................................................................................................................................................................................................ATTAACTACATCAGAAGTATTG......................................................................................................................................................................................................................22202.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000010000000000020000000000000000000110010200000000101000000000070060000000000100800000001000000000020000000011000010
...................................................................................................................CAGGAATAGATCTGGAATG........................................................................................................................................................................................................................................................................................................19202.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000001000002000000000000000000000000000010000010030001010000004001000000000260000000000000000000000000020400053000000000010000
....................................................................TGCCTGTAGACCACACT-AAG.....................................................................................................................................................................................................................................................................................................................................................20201.953900000000000001000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000160000000000000000000000000000000000000000000000000002002000000100000000000000000000000000000000000000000000000001000000190000000000000000000000000000000000000000000000010000000000000000300000000000000000000000000000000000
.............................................................................................................AA---TCAGGAATAGATCTGGAAT.........................................................................................................................................................................................................................................................................................................21201.90380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000020000000030000000000000000000000000000000003000000000300030004000000000000000000000000000000000000000000000000000000201000000000000500200000000000023000010000000000020000
..........................................................................................TCA----------GTTATAAA---TCAGGAATAGA.................................................................................................................................................................................................................................................................................................................22201.90380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000030000001000000000000000001002000005000000000010000000000000000200000000100000000000000010100000000200000000000000020200002000000000035030
...................................................................................................................................ATGTACACTCGCTTAATAAAA......................................................................................................................................................................................................................................................................................21201.903800000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002003000000000000000000000000000000000100000000000000000000000000000000010090000300000000000000000040000
............................................................................................A----------GTTATAAA---TCAGGAATAGATCTGG............................................................................................................................................................................................................................................................................................................25201.903800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000400000000000000100000000000000000000100181000000000000000000000000003001000000000000000000050000000000011010
.......................................................................................AGATCA----------GTTATAAA---TCAGGA......................................................................................................................................................................................................................................................................................................................20201.903800000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000002000000000000001000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000010901010001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000050400
..........................................................................................................................................................................TGACCAACTGCGTTTTGAG.................................................................................................................................................................................................................................................19201.85370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000020000000000000000000000000000012001000000000000000000010000000000000100000000304000000000000200200000001000000000000000000300000000000110023040
...............................................................................................................................................................................................TTTATTAACTACATCAGAAGTA.........................................................................................................................................................................................................................22201.853700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000020220009000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CTGTAGACCACACT-AAGATC..................................................................................................................................................................................................................................................................................................................................................20201.853700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000001300000000000000000000000000000000000000000000010000000000000000000100000000000000400000100000000020100000000000000000000000100000000000000000050600
..............................................................................................................................................................TAAAGATA-AAATGACCAACTGC.........................................................................................................................................................................................................................................................22201.85370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005090006064100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000200
................................................................................................................................................................................................TTATTAACTACATCAGAAGTAT........................................................................................................................................................................................................................22201.853700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000002150000000000000000000000000000000000200001000000000000000020000000000000100000000000000100000000000000000010
................................................................................................................................................................................................................AAGTATTGGAATTCTAATTA..........................................................................................................................................................................................................20201.85370000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000010000000400000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000200002380010000001000100000010000000000000000000010002020
......................................................................................................................................................................................................ACTACATCAGAAGTATTGG.....................................................................................................................................................................................................................19201.80360000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000010000000000000000200000000101000003100000030000000000400100000000000310300111000000000032000
.........................................................................................................................................................................ATGACCAACTGCGTTTTGAGAC...............................................................................................................................................................................................................................................22201.80360000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010020000000010004010000002110010000000200000000000000000000001000031000022000000100000600
............................................................................................................AAA---TCAGGAATAGATCTGGAATG........................................................................................................................................................................................................................................................................................................23201.75350000000000000000000001000000000000000000001000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000030000000000000000010010000000000000030000005000100000000000000000000600030000000000023000001000000100000000
........................................................................................................TTATAAA---TCAGGAATAGATCTG.............................................................................................................................................................................................................................................................................................................22201.75350000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000010000000000000000000300000000000010000090000004000000000000000000000000001021000000010000000000100100000000000000000001000100001000000000000001000
..............................................................................................................................................................................CAACTGCGTTTTGAGACTTTAT..........................................................................................................................................................................................................................................22201.753500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000100000000000000000000000000000000000000000000000000700010000000000000000000000000000000000000000000000000000010000000001000000010000000001000004000000000000000
.............................................................................ACCACACT-AAGATCA----------GTTATA.................................................................................................................................................................................................................................................................................................................................21201.75350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000002000101000000000000001000000000000000000002300000000200150000000000000101000000070000100000000000000000020200
............................................................................................A----------GTTATAAA---TCAGGAATAGATCTGGA...........................................................................................................................................................................................................................................................................................................26201.75350000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000200000000000000000000000000100130000100000000000000400100000000200000000000020001600006000000000000020
...................................................................................................................................................................ATA-AAATGACCAACTGCGT.......................................................................................................................................................................................................................................................19201.75350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005000000000000000000000000000000040000000000000000000000000000000001040000001000000000000000000000000014000002000000000000000010000000000400000000000000000000000000001000104000
............................................................................................................................................................................................................TCAGAAGTATTGGAATTCT...............................................................................................................................................................................................................19201.70340000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000220010000000000000000000000000000100000000000000300000000000000010000000000000000000200001000000000100000000000000200010031000101000000000000000020000
...........................................................................AGACCACACT-AAGATCA----------GTTAT..................................................................................................................................................................................................................................................................................................................................22201.70340000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000003080201131300000000011000000000000000000001000011000000000200000000000000000000000000000000001000000000000010
............................................................................................................................ATCTGGAATGTACACTCG................................................................................................................................................................................................................................................................................................18201.703400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000300310000000100000000000000000000000000000000000000000000000000000000000000000000000000000000110005000000040000000000000001100000000000000000000000200000000000000000000000000
..........................................................................TAGACCACACT-AAGATCA----------GTTA...................................................................................................................................................................................................................................................................................................................................22201.703400000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000011000000000000100000000000000000000000000000000000000000020004040000000000000000000000000011000000000000000000000000000000000000000000020100100000100001000000020000
.......................................................................................................................................................................AAATGACCAACTGCGTTTTGAGA................................................................................................................................................................................................................................................23201.65330000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000101000001021000001000000000001000001000010000002000000000010000000200000000000000000000001100000000041000000000100530
..................................................................................................................TCAGGAATAGATCTGGAATGTACACT..................................................................................................................................................................................................................................................................................................26201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053102200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000
.................................TG-CTAGTGTCAGCACTTGGCT.......................................................................................................................................................................................................................................................................................................................................................................................21201.653300000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000000041000000000000000000000000000000000000000000000000000000100000000000000000410000000000050000000000000000000000000002000000000000000000000000000000000000020000000100000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................AGTATTGGAATTCTAATTAAC........................................................................................................................................................................................................21201.65330000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000001007120000000000000000000100000000000000600000000200100000000000000000000000041000000000000000000000031000
.....................................................................GCCTGTAGACCACACT-AAGATC..................................................................................................................................................................................................................................................................................................................................................22201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100500000000000000000000100000000000000010000000000020000000000000000000000000010100000000000000010060000100000000010000000000010
...............................TTTG-CTAGTGTCAGCACTTG..........................................................................................................................................................................................................................................................................................................................................................................................20201.603200000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000040011000000020000000000000000000000000000000000001000000000000000000000000000000001000000000000000010000000000000000000000000000000002000000000000050
...............................................................................................................................................................................................TTTATTAACTACATCAGAAG...........................................................................................................................................................................................................................20201.603200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000100000000010001300000000000000000000000000000000000000070000000000000000000000000000000000000001000000000000010000010000000000000000000000000000000000000000000400
.ATATTGCA-------------------GAATTTG-CTAGTG....................................................................................................................................................................................................................................................................................................................................................................................................21201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000030000000000000000000000000000000000000000000001000000010000000000000000000906000000000000000000000000000000000000000000000002000000000000000000000000000000000001100000000000100000000000100000000000000200100000000000000000010
............................................................................................................................................................................................................TCAGAAGTATTGGAATTCTAA.............................................................................................................................................................................................................21201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000300002000000000000000000000000070000000000000000000000010000000000000100000000000000000000000000020000000010000000000240000000000000001000000000000200010000000110000000
.........................................................................................ATCA----------GTTATAAA---TCAGGAAT....................................................................................................................................................................................................................................................................................................................20201.603200000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000010000000000000000000000000000000000000000000000010000000001000000000000000000000000030000010000000000000001000000000000000000000000000000000000000000000001800
................................................................................................................................................................................................TTATTAACTACATCAGAAGTATTGG.....................................................................................................................................................................................................................25201.60320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000024000000000000000000000000610132000000000010000000000000000000010001000000000000000000000000000010100000010100000000031000000000001000
droEre2
AATTCTATA-------------------CCATT----------------------------ACAGAAATGTATGTAATGACTATG-AAA--------------------AT---TTAATACAAA-------------------------------------------------------------------------------------------------------------------------------------------------ACTCGAAATCCGAATGGGCATCGACTGCACTTGAAATATTTGATAAGGCAT-GCATATAAAGGGACTTCCCGTTATAAACTT--TA------TAAATACA--TATGTCGTACGACCAACGCTTGATTTCATTACTAAGCATTCA---CTTCAGTTACGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CATATTGCA-------------------GATTTTATCTAGTGTCAGCACTTTGCGTTCACAAGCGATCGGCCTGCAGGCCACGCT-AAGTTCA----------GTTACAAA---ATAAGAACATATTGA-GATGTACGTGTTATAAAGAAAGACCAAATAAAAATGCAAAGAACTAAATATATTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTA---------TTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AAATTAACA-------------------TTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------TGATAAGTAAA-ATAATAATTGGTATTCCCCTATATTGTGTTCTTATCGTTATAGGTATAAATGCAATCATTTACTGTTGCTTCGTTTCAGTACTGAACAGT-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGACAG-CGCAAAACTGGTATTCCCCTTTATTGTTCCCTTA------TCGGTATAAATGCGACCCGTAGCGGCTGCCTCAGTTCAGT----------------------TACAAAGSizeHit CountTotal NormTotal
No Reads
droTak1
TGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCCCTATATTGTTTTCTTA------TCGGTATAATTGCGACTCCTAGCTGTTGTTTTATTTCAGTACGA-ACAGCAA---CTTCAGTCGTTTACSizeHit CountTotal NormTotal
No Reads
droEle1
CAACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGAGAG-TGAAATAATGGTAGTCCCCTTTATTGTTCTTCTG------ACGCTATAAAGGCGACTGGTAGCTGTTGCTTGATTTCAGTACTGAATAGT-T---CTTCAATCG----CSizeHit CountTotal NormTotal
No Reads
droRho1
CTTTATCATGACTAAGCCACAAATGCTATTTTTTG-CAAATGTTATTAACTGGTTT-TACAGTGGGTTATTTTAACAGAAAT-----------------------G---ATTTAACAGA-------------------------------------------------------------ACTTTTAACATCATATAACCTGCATCACTATAATTAAATTTTCAAT-----------------------------------------------------------------------------------TGATAAGACAACTGAAATAATGGAAGTCCCCTTTATTGTTTT-TTG------TCGGTATAAAGACGACTGGTAGCTGTTTCTTGATTTCAGTACTAAAAAGT-T---CTTCAACAGAAAACSizeHit CountTotal NormTotal
No Reads
droFic1
AGTTATGCG-------------------GATTTTG-CTAGTGTCAGCACTCTGCTG-CACGAGCGGTCGGTTTGCCGGCCGCGCA-TAGCTTACGTAAAGTCTTTTATGTT---TCAGTTTTAGTTTTGATTT----------TGAATAAAGAACATTTGAATGTA-AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCGGCATTGGCCG--TT------AACATTTA--GACGCAGTAT---------------------------------TATCTC-------TATSizeHit CountTotal NormTotal
No Reads
droKik1
AGTTATGTT-------------------GATGTTG-CTAGTGTCAGCACTTTGCTG-CACGAGCGGTCGGCTTGCCGGCCGGACGTTGGCTTATGTAAATTCATTTATGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTAGTTTTAATTCAGAAATTCAAT-----------AAAGC-------------------ACTCGCTTGASizeHit CountTotal NormTotal
No Reads
droAna3
CTT-------------------------------G-CGATCGTCAGCATTTCCCACTGTCACGCGGTCGGCCTGCCGACTAAGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................CCCACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................23201.40282800000
..................................................TCCCACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................24200.55111100000
...................................................CCCACTGTCACGCGGTCGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................24200.408800000
.....................................................CACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................21200.204400000
.................................................TTCCCACTGTCACGCGGTCGG........................................................................................................................................................................................................................................................................................................................................................................21200.153300000
...................................................CCCACTGTCACGCGGTCGGCCT.....................................................................................................................................................................................................................................................................................................................................................................22200.153300000
..................................................TCCCACTGTCACGCGGTCGGCCTGCCGA................................................................................................................................................................................................................................................................................................................................................................28200.153300000
.................................................TTCCCACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................25200.153300000
...............................................ATTTCCCACTGTCACGCGGTC..........................................................................................................................................................................................................................................................................................................................................................................21200.153300000
........................................................TGTCACGCGGTCGGCCTGCCG.................................................................................................................................................................................................................................................................................................................................................................21200.102000002
...................................................CCCACTGTCACGCGGTCGGCCTGCCGA................................................................................................................................................................................................................................................................................................................................................................27200.102200000
.......................................................CTGTCACGCGGTCGGCCTGCC..................................................................................................................................................................................................................................................................................................................................................................21200.102200000
.....................................................CACTGTCACGCGGTCGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................22200.102200000
..................................................TCCCACTGTCACGCGGTCGGCCT.....................................................................................................................................................................................................................................................................................................................................................................23200.102200000
.TT-------------------------------G-CGATCGTCAGCATTTCCC........................................................................................................................................................................................................................................................................................................................................................................................21200.102010010
...................................................CCCACTGTCACGCGGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.......................................................CTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................19200.051000010
..................................................TCCCACTGTCACGCGGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.................................................TTCCCACTGTCACGCGGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................23200.051010000
........................................CGTCAGCATTTCCCACTGTCACGCG.............................................................................................................................................................................................................................................................................................................................................................................25200.051100000
................................................TTTCCCACTGTCACGCGGTCGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................27200.051100000
......................................................ACTGTCACGCGGTCGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................CCACTGTCACGCGGTCGGCCT.....................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..................................................TCCCACTGTCACGCGGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...................................................CCCACTGTCACGCGGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................20200.051010000
..................................................TCCCACTGTCACGCGGTCGGT.......................................................................................................................................................................................................................................................................................................................................................................21200.051000100
..................................................TCCCACTGTCACGCGGTCGGCCTGCAT.................................................................................................................................................................................................................................................................................................................................................................27200.051100000
................................................TTTCCCACTGTCACGCGGTCG.........................................................................................................................................................................................................................................................................................................................................................................21200.051100000
............................................AGCATTTCCCACTGTCACGCG.............................................................................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................CCACTGTCACGCGGTCGGCCTGC...................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.........................................GTCAGCATTTCCCACTGTCACGCGGTC..........................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.......................................TCGTCAGCATTTCCCACTGTCACGC..............................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................TCAGCATTTCCCACTGTCACGCGG............................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................................................TCCCACTGTCACGCGGTCGGCCTGCC..................................................................................................................................................................................................................................................................................................................................................................26200.051100000
................................................TTTCCCACTGTCACGCGGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................23200.051000100
.........................................GTCAGCATTTCCCACTGTCACGCGG............................................................................................................................................................................................................................................................................................................................................................................25200.051100000
......................................................ACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................20200.051000001
..................................................TCCCACTGTCACGCGGTCGGCCTGCAA.................................................................................................................................................................................................................................................................................................................................................................27200.051100000
...................................................CCCACTGTCACGCGGTCGGCCTT....................................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................................TTTCCCACTGTCACGCGGTCGGCCT.....................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................TCAGCATTTCCCACTGTCACGCGGTC..........................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.........................................GTCAGCATTTCCCACTGTCACGCGGTCG.........................................................................................................................................................................................................................................................................................................................................................................28200.051100000
....................................................CCACTGTCACGCGGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................20200.051000010
........................................................TGTCACGCGGTCGGCCTGCCGA................................................................................................................................................................................................................................................................................................................................................................22200.051100000
........................................CGTCAGCATTTCCCACTGTCACGC..............................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................GTCACGCGGTCGGCCTGCCT.................................................................................................................................................................................................................................................................................................................................................................20200.051000001
....................................................CCACTGTCACGCGGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................19200.051000100
..........................................TCAGCATTTCCCACTGTCACG...............................................................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................TTTCCCACTGTCACGCGGTCGGCCTG....................................................................................................................................................................................................................................................................................................................................................................26200.051100000
droBip1
TGTTATGTG-------------------GATATTG-TTAGTGTCAGCACTTTGCTG-CACGAGCGGTCGGCTTACCGGCCGCACT-TAGCTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droVir3
AAAAC---------------------------------------------------------------------------AAACA-CAGATAA----------ATTATAAA---TCAAGCATAGATCAAGCATATATATA------ATATGAGTCAAACGCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
AATATAATA-------------------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATACAACTGCCTTTAATTAATTT------------------------------------------ATTT---------------ATTTATTCA---ATGTGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:47 AM