ID:

dsi_8823

 Coordinate:

2r:10554854-10555003 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.8 -5.5 -5.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATCGTCAGCTGAATAGTACATACTATATCCATATATAATATTTTTACGTGTGTGTGTGTCTGCGTCTGTGCTTTGTGTTCGCGTTGAATAAGTAACTTTTAATTGCCTTTATTCGCTACAACAATTATCGATCCTACCCTTTCTGTTTAAGTGAGTGCATTACAAAAACAAAAACATAGAAAAAAAAACAAGAGAGGAAAA
********************************************************************************************************************.....((((((..(((.((((...((((.......)))).))))..))).)).))))................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
....................................GCCGTGCACTTCGATCGTCAGCTGAA............................................................................................................................................................................................ 26 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGT.................................................................................................................................................................................................... 18 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTCAGCTGA............................................................................................................................................................................................. 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTCAG................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.................................TACGCCGTGCACTTCGAT....................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0
........................ACTGAACGTTACGCCGTGCACTTCGA........................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTCAGC................................................................................................................................................................................................ 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
........................ACTGAACGTTACGCCGTG................................................................................................................................................................................................................ 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................CACTTCGATCGTCAGCTGAATAG......................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................AACTGAACGTTACGCCGTG................................................................................................................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..............................CGTTACGCCGTGCACTTCGATCGTCAG................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GTGCTTTGTGTTCGCGTTGAA................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................CTTCGATCGTCAGCTGAATAGT........................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............TTCATTCGTTAACTGAACGTT........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................CGTGCACTTCGATCGTCAG................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTCGCGTTGAATAAGTAACTTTTAATT................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................TTCGTGTTCGCGTCGAATA............................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTCAGCTGAAT........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................ATTCGTTAACTGAACGTTACGCC................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGGATAAGTACTTTTTAATTGCCTTT........................................................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................CTTCGATCGTCAGCTGAATAGTA....................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.CGCATCACTCGCTTCATTCGT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.....TCACTTCCTTCTTTCGTTAACT............................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................TAAGTGAGTGCATTACAAAAACA............................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................ACTTCGATCGTCAGCTGAA............................................................................................................................................................................................ 19 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................CGTTAACTGAACGTTACG..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............TCATTCGTTAACTGAACGTT........................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ATCGTCAGCTGAATAGTACATACTA................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................GCACTTCGATCGTCAGCTGAATAG......................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTCAGCT............................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................CTGAACGTTACGCCGTGCACC............................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................GCCGTGCACTTCGATCGTC................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................CGATCGTCAGCTGAATAGTAC...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................TGAACGTTACGCCGTGCACT............................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................GCACTTCGATCGTCAGCTGAA............................................................................................................................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AATTATCGATCCTACCCT............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ATCGTCAGCTGAATAGTA....................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................GTCTGCGTCTGTGCTTTGTGTTCGC....................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................ACTGAACGTTACGCCGTGCA.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................CGTGCACTTCGATCGTCAGCTA.............................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................GCCGTGCACTTCGATCGG.................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................GTTAACTGAACGTTACGC.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................CTTCGATCGTCAGCTAAATAG......................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................TGCACTTCGATCGTCAGCTGA............................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................GCACTTCGATCGTCAGCTGA............................................................................................................................................................................................. 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................GCACTTCGATCGTCAGCT............................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTAGTGTTCGCGTCGAATA............................................................................................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................ACTTCGATCGTCAGCTGA............................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CACTTCGATCGTCAGCTGA............................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACAAAAACAGAAACCTTGAAAAAA................ 24 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................ACAAAAACAGAGAAAAAAA............... 19 1 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................CCATGCCCTTCGATCGTCAT................................................................................................................................................................................................. 20 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................TCGCGTTGATTAAGT............................................................................................................ 15 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................AAACAAAAACAAAGAAAAAAA............... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TTATAGATCGTACCCT............................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................TCTGAGCTTTGTGTT.......................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGCGTAGTGAGCGAAGTAAGCAATTGACTTGCAATGCGGCACGTGAAGCTAGCAGTCGACTTATCATGTATGATATAGGTATATATTATAAAAATGCACACACACACAGACGCAGACACGAAACACAAGCGCAACTTATTCATTGAAAATTAACGGAAATAAGCGATGTTGTTAATAGCTAGGATGGGAAAGACAAATTCACTCACGTAATGTTTTTGTTTTTGTATCTTTTTTTTTGTTCTCTCCTTTT
*************************************************************.....((((((..(((.((((...((((.......)))).))))..))).)).))))................******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
....................CAATTGACTTGCAATGCGGCA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................CTAGGATGGGAAAGACAAATT................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................CACGAAACACAAGCGCAACTTA................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
CGCGTAGTGAGCGAAGTAAGC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................ACACACACACAGACGCAGACA.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................GCTAGCAGTCGACTTATCATG...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................TGAAGCTAGCAGTCGACTTAT.......................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0
.........................................CGTGAAGCTAGCAGTCGACTT............................................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................GAAGCTAGCAGTCGACTTAT.......................................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
......GTGAGCGAAGTAACCATT.................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................TCAGTAGCTAGGCTGGGAAA........................................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................CTAGCAGCAGACTTGTCAT....................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................................TTTTTTTGTTCTCTC..... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10554804-10555053 - dsi_8823 GCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATC------GTCAGCTGAA-T--AGTA-----CATACTATAT-----CCATAT-------ATAAT-----A--TT------TT------TAC-----GTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCGTTGAAT--------------AAGTAACTTTTAA------TTGCC----------------TTTATTC----------------------------------------------------GCTA-CAACAATTATCGATCC----------------TAC-----CCT-TTCTGTTTAA--GTGAGTGCATTACAAA--A-----AC--------A---AAA-------ACATAGAAA--AAAAAAC----AAG---A----GAGGAAAA--
droSec2 scaffold_1:7392454-7392703 - GCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATA------GTCAGCTGAA-T--AGTA-----CATACTATAC-----CCATAT-------ATAAT-----A--TT------TT------TAC-----GTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCGTTGAAT--------------AAGTAACTTTTAA------TTGCG----------------TTTATTC----------------------------------------------------GCTA-CAACAATTATCGATCC----------------TAC-----CCT-TTCTGTTTGA--GTGAGTGCATTACAAA--A-----AC--------A---AAA-------ACATAGAAA--AAAAAAC----AAG---A----GCAGAAAA--
dm3 chr2R:9866874-9867120 - GCGCATCACTCTCTTCATTTGTTACCTGAACGTTACGCCGTGCATTTCGATC------GTCAGCTGAA-T--AGTA-----CATACTATA-----------T--CATATATAAT-----A--TT------TC------AAC-----GTGTGTGTGTGTCT---GCG-TCTTTGCGT----TTTG-TTC-----GCGTCAAAT--------------AAGTAACT--TAA------TTGCG----------------ATTATTC----------------------------------------------------GCAA-CAACAATTATCGATCC----------------TAC-----CCT-TTTTGTTTGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------ACATAGAA----AAAAAC----AAC---A----GGAAAAAATC
droEre2 scaffold_4845:15953999-15954278 + GCGCATCGCCCGCTTCATTCGCTAACTGATCGTCTTGCCGTACACTTCGATT------GTCAGCTGTT-T--GGCA-----------------TTTCTATAT--AGTATATAGT-----A--TA------TC------AACGT---CTCTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TGGCG----------------ATTGTTCGTGTTT--------------------GTTAAAAAACCAGAAACTAATCTAGCGC--CCAACAATTATCGATCCC---------------TAT-----CCG-TTGTGTGTGA--GTGAGTGCATTGCAAA--T-----AA--------A---ACA----ACAAC--AGCAA--CAAAAAC----AA---CA----GTA---AA--
droYak3 2R:7085971-7086250 + GCACATCGCTCGCTTCATTCGTCAACTGAACGTCTCGCCGTGCACTTCGATC------GTCAGCTGAA-T--GGTA------------T-----TTCTATAT--AGTATATAGT-----T--CA--TATATC------AACGT---CTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TGACG----------------ATTGTTCGTGTTC--------------------GTTAGAAAACCAGAAACTAATTTAGCGC--CCAACATTTATCGATCCCT--------------TAC-----CCC-TTGTGTGTGA--GTGAGTGCATTACAAA--A-----AA--------A---A-------------ATAATAATAAAAAG----AA---CA----GGA---AA--
droEug1 scf7180000409462:2977019-2977291 + GTGCATCATTCGCGATATTCGTTTACTGAACGCCGCGTCGTGAACTTCGATCGCTTCGGTCAGCTGTAGTAC---------AATAGTAAAATAATACTATAT--AGA-----------AA----------TC--TATTTGT-----GTTTATGTGTGTCT---GTG-TAAGAGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TTGGG----------------ATCGTA------C--------------------TTTAAAGAACCATAAAAACTTCTTTCGC--TAA-AAAATATCTATTG----------------TAC-----CT--------------GTTAGTGCATTCGAAA--A-----AA----GC--A---AAA-------AC--AAAA---CAAAAAT----ACAAAGA----GAA---AG--
droBia1 scf7180000302292:3799176-3799439 - GCGCATCGTTCGCGACAGTCGCCTACTGAACTGAACGCCGCGCACTTCGATCGC--CCGTCAGCTGCAATAC--TT-----AACGCTATACCTATACTATAT--AG-------T-----C--CG------TA------TCT-----GTCTGTTCGTGTCT---GTG-TCTGCGCTT----TCTG-TTC-----GCC---AAT--------------AACTAACTTTTAA------GTGCG----------------ATCGTA------C--------------------TGTAGGAAAC-AGAGTA--AT--TCCGC--CTAACGATTATCGGTCA----------------TAG-----CCT-TT--GTGTGG--CTGAGTGCATTGGAAA--A-----AC--------A---AAA------------------AACAACCAA-A---AAAA----GAC---CA--
droTak1 scf7180000415376:86441-86702 - GCGCATCATTCGCGTCATTCGTTCACTGAACGTCGCGCCGTGCACTTCGATT-----CGTCAGCTGCAATTC--CTAACGCTATACTATA-----TCTATAT--AGTCTAT------------A------AA--GA--TCCGT---GTGTGTGTGTGTCT---GTG-TCTGGGCTT----TGTG-TTC-----GCA---AAT--------------AACTAACATTTAA------TTGCG----------------ATCGTG------C--------------------TTTAGGAAAT-AGAAAC--AT--TTCGC--AAAACGATTATCGATCC----------------TAG-----CCT-TT--GTGTGA--GTGAGTGCAGTAAAAC--A-----AC--------A---AAA-------A-ATACAAA-------------------A----CAA---AA--
droEle1 scf7180000491271:227034-227314 - GCGCATCGTTCGCT-TATTCGTTAGCTGAACGTCGCGCCGTGCACTTCGATC------GTCAGCTGCAC---TG-----------CT------GTTCTATAT--AGTATAAACATTTATG--TA------TG------TAC-----GTCTGTGTGTGTCT---CTG-CCTGAGCTT----TGTG-TTC-----GCGTTGAATAACAAAAAATAAATAACCAACTTTAAA------TTGCG----------------ATCGTA------C--------------------TATAGAAAATCAGTAAC--AA--TTCGCAACTCGC-GATATCAATCC----------------TAC-----CCCACT--GTGTGATAAAAAGTGCATAAAAAG--------------------------------ACAAC--AA--AATAAATAAAAA---AAA----ACA---AA--
droRho1 scf7180000777315:18972-19207 + GCGCATCGTCTGT-TTATTCGTTGGCTAAACGTCGCGTCGTGCACTTCGATC------GTCAGCTGCTC---TG-----------AT------ATTTTATAT--ATTATAT----TGATA--TA------TGTACA--TGCGTCCCGTCTGTGTGTGTCT---G---GTTGAGCTT----TGTG-TTC-----GCGTTAAAT--------------ATCTAA------A------CTGCG----------------ATCGTA------T--------------------TATAAAAAATCAGT---------TAAAT---CAACAGATAGCAATCC----------------TAC-----CCT-TT--GTGTGA--GTGAGTGCATAAAAT-----------------------------------------------AGA----------CA----ACA---AA--
droFic1 scf7180000454066:1738484-1738724 + CTGCATCGTTCGCCTTATTCATTTACTAAACGTAGCGCGGTGCACTTCGAT---------CAGCTGCGC---GA-----------CT------ATTCTATAT--AGTAT----------A--TG------TA------TAC-----GTCTGTGTGCTTCT---CTG-GTTAAGCTT----TGTG-TTT-----GCGTTGAAT--------------AACTAACTTTTTA------TTGCG----------------ATCGTA------C--------------------TTCAGAAAACCAAAAAC--GT--TTAAC--CATACAAATATCGATCT----------------TTC-----CC--TT--GTGTGA--GTGAGTGTATTGAAAA--------------------------------------------AAAGAC----AAC---A----AAAAAAAA--
droKik1 scf7180000302817:320464-320682 - ACGGATCGTTCGCTTTATTTGCTACTGGAACGTCGCGGCGTGCACTTCGAT---------CAGCTGCACTTCTG-A-----G-----------AAACTATAT--AGTCTAT------------A----TAAC--CG--TTC-----GTGTGTGTGTGTGTGCTGTGCTGTGCGCTT----TGTG-ATC-----GCGTTAAAT--------------ATCTAACTTGTAA------TTGCT------------------TACA------C--------------------TTTAGCA---------------------------TA---AGC------------------------------------TATTTAG--------GC----------A-----ACGTAAGCACGAAAAAA-------ACGTAAAAA--C--------------AAC----TAC---GA--
droAna3 scaffold_13266:17178402-17178663 - A----TCGTTCTCTTTATTGCTTGACCAACCGTCGTCGCGAGCAGTTGATTC-----CGTACCCAG---T--------------ACTATAT-----ATATATATAATTTAC----CGATAATTTTTTACACT------AGCGT---C-TTGTGTGTATTT---GTG-C-----CTT----TGTG-TTC-----ACGTTAAAC--------------AACTAATATTTAA------TTACT----------------ATTGAAAC----C-------------------TTCTAGAAACT-CGAACC---TCTTTCGC--CTAACA-ATATCGAACC----------------TTA-----CCT-TT--GTGA------AAGTGCAATAAATC--G-----CT--------A---AAA-------AC----AA---GAAAACTAA-A---AAAA----ATA---TA--
droBip1 scf7180000396573:73320-73362 - AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAAA--A-----AA--------A---TAA-------AAAGAGAAA--AACAAAC----AAA---A----GAAAATAA--
dp5 Unknown_group_212:18705-18743 - ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--A-----AG--------A---GAG-------ACACATAAAAAAAAAAA----GA---GAA----GGA---AA--
droPer2 scaffold_1:9231725-9231764 + ATGTGT-----------------------------------------------------------------------------------------------------------------------------G------TGT-----GTGTGTGTGTGTGT---GTG-TGTGTGTAT----TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004540:2591327-2591379 + ATACGAAAA--------------------------------------------------------------------------------------------------------------C--TC------TC------TAC-----GTGTGTGTGTGTCT---GCG-TGT-----T----TGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT--GTGAGT-------------------------------------------------------------------------------------
droVir3 scaffold_13049:4472490-4472677 + T------------------------------------------------------------------------------------------------------------------------------------------AT-----GTGTGTGTGTGTGT---GTG-TGTCTGTTT----TTTG-CTC-----AGC---AAA--------------C---AGAAATTAA------AGCCA----------------AACA----------------------------TAGAAAAAAAA-AGAACA---GACGCAGT--AGAACA-AAAGCCAACCG-AGCAGGAAAAAACCGACGCATGAC--A------------CAAAT----TCACAA--A-----AG--------G---TGGAAAAACAAA--AACGA--CAAAACGAC-A---AAAATCTACATGGAAATG
droMoj3 scaffold_6680:2015317-2015497 - T--------------------------------------------------------------------------------------GTAT-----CTATGT-------GTG---------------------------------------CGTATGTTT---GTG-TGT-----GTGTGTGTGTGTGAGTCTGTG-------------------------------------------------------------TTGCTTGTATTTGTAATAAAAGCGATGAAAATGGCAACAACA-ACAACA---ATGACAGC--AGAA-----AGGAAAACG-AAA------------------------------TGG--CAAAATAAATTGAAAG------------------A---GAA-------ACAAATAAAA-ATCAACGAG-A---AAAAGGCTGCGGAAAA--
droGri2 scaffold_15252:4621381-4621536 - T----------------------------------------------------------------------------------------------------------------------G--TG------TG------TGT-----GTGTGTGTGTGTGT---GTG-TGTGTGTCC----TGTG-TGT-----GCATGGAAG--------------AGTTCGAT--AAATTTCAATTACTAACCCAATTAAAAAATGTTGTACG----C-------------------TTTTAGGAGCC-CGAA---------------------------------------------------------------------------------------AAATAAAACGC--------G---ACA-------ACGTATAAA--AATAAAT----GTT---G----GCAAAAAA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATC------GTCAGCTGAA-T--AGTA-----CATACTATAT-----CCATAT-------ATAAT-----A--TT------TT------TAC-----GTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCGTTGAAT--------------AAGTAACTTTTAA------TTGCC----------------TTTATTC----------------------------------------------------GCTA-CAACAATTATCGATCC----------------TAC-----CCT-TTCTGTTTAA--GTGAGTGCATTACAAA--A-----AC--------A---AAA-------ACATAGAAA--AAAAAAC----AAG---A----GAGGAAAA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................GCCGTGCACTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................2613.00320000010000000000
....................................GCCGTGCACTTCGATC------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................1813.00320000000001000000
....................................GCCGTGCACTTCGATC------GTCAGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................2513.00321000000000000000
....................................GCCGTGCACTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2113.00330000000000000000
.................................TACGCCGTGCACTTCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200100000001000000
........................ACTGAACGTTACGCCGTGCACTTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00220000000000000000
....................................GCCGTGCACTTCGATC------GTCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2212.00211000000000000000
........................ACTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00210000000001000000
..........................................CACTTCGATC------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
.......................AACTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
..............................CGTTACGCCGTGCACTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..........................................................................................................................................................................GTGCTT----TGTG-TTC-----GCGTTGAA..........................................................................................................................................................................................................................................................................2111.00100000010000000000
............................................CTTCGATC------GTCAGCTGAA-T--AGT........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............TTCATTCGTTAACTGAACGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......................................CGTGCACTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.........................................................................................................................................................................................TTC-----GCGTTGAAT--------------AAGTAACTTTTAA------TT......................................................................................................................................................................................................................................2711.00100000000100000000
....................................GCCGTGCACTTCGATC------GTCAGCTGAA-T--...........................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
................ATTCGTTAACTGAACGTTACGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
............................................CTTCGATC------GTCAGCTGAA-T--AGTA-----..................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.CGCATCACTCGCTTCATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................TAA--GTGAGTGCATTACAAA--A-----AC--------A---.....................................................2311.00100000000000100000
...........................................ACTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................1921.00220000000000000000
...................CGTTAACTGAACGTTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..............TCATTCGTTAACTGAACGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.................................................ATC------GTCAGCTGAA-T--AGTA-----CATACTA...........................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.........................................GCACTTCGATC------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
....................................GCCGTGCACTTCGATC------GTCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.........................CTGAACGTTACGCCGTGCACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................GCCGTGCACTTCGATC------GTC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
...............................................CGATC------GTCAGCTGAA-T--AGTA-----C.................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..........................TGAACGTTACGCCGTGCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................GCACTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................2121.00220000000000000000
....................................................................................................................................................................................................................................................................................................................................AATTATCGATCC----------------TAC-----CCT-.......................................................................................................1811.00110000000000000000
.................................................ATC------GTCAGCTGAA-T--AGTA-----..................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
............................................................................................................................................................GTCT---GCG-TCTGTGCTT----TGTG-TTC-----GC................................................................................................................................................................................................................................................................................2511.00100100000000000000
........................ACTGAACGTTACGCCGTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
......................................CGTGCACTTCGATC------GTCAGCTA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
....................................GCCGTGCACTTCGATC------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................GTTAACTGAACGTTACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
........................................TGCACTTCGATC------GTCAGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110000000000000000
.........................................GCACTTCGATC------GTCAGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000000000
.........................................GCACTTCGATC------GTCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
...........................................ACTTCGATC------GTCAGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
..........................................CACTTCGATC------GTCAGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110000000000000000
droSec2
GCGCATCACTCGCTTCATTCGTTAACTGAACGTTACGCCGTGCACTTCGATA------GTCAGCTGAA-T--AGTA-----CATACTATAC-----CCATAT-------ATAAT-----A--TT------TT------TAC-----GTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCGTTGAAT--------------AAGTAACTTTTAA------TTGCG----------------TTTATTC----------------------------------------------------GCTA-CAACAATTATCGATCC----------------TAC-----CCT-TTCTGTTTGA--GTGAGTGCATTACAAA--A-----AC--------A---AAA-------ACATAGAAA--AAAAAAC----AAG---A----GCAGAAAA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................CGATA------GTCAGCTGAA-T--AGTA-----CA................................................................................................................................................................................................................................................................................................................................................................................................2213.0030003
...............................................CGATA------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020002
....................................................................................................AT-------ATAAT-----A--TT------TT------TAC-----GTGTGTGTGT.......................................................................................................................................................................................................................................................................................................................2512.0020020
.................TTCGTTAACTGAACGTTACGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0022000
..........................................CACTTCGATA------GTCAGCTGAA-T--AGTA-----..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
............................................CTTCGATA------GTCAGCTGAA-T--AGTA-----..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......................................CGTGCACTTCGATA------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
.................................................................................................................T-----A--TT------TT------TAC-----GTGTGTGTGTGTCT---GC..............................................................................................................................................................................................................................................................................................................2511.0010100
................................................................................................................AT-----A--TT------TT------TAC-----GTGTGTGT.........................................................................................................................................................................................................................................................................................................................1811.0011000
...........................................................TCAGCTGAA-T--AGTA-----CATACTATAC-----CCA................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
........................ACTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
............................................................................................................................................................GTCT---GCG-TCTGTGCTT----TGT............................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................GTGTGTGTGTGTCT---GCG-TCTG........................................................................................................................................................................................................................................................................................................2111.0010100
.............TTCATTCGTTAACTGAACGTTACGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
.............................ACGTTACGCCGTGCACTTCGATA------G........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
....................................................................................................................................................................CG-TCTGTGCTT----TGTG-TTC-----G.................................................................................................................................................................................................................................................................................1911.0011000
...........GCTTCATTCGTTAACTGAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
......................TAACTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
..............................................................GCTGAA-T--AGTA-----CATACTATAC-----CCA................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
......................................................................................................................................................GTGTGTGTCT---GCG-TCTGTGCTT----T..............................................................................................................................................................................................................................................................................................2311.0010100
..........................................................GTCAGCTGAA-T--AGTA-----CATACTATAC-----C..................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
............................................................................................................................................................................GCTT----TGTG-TTC-----GCGTTGAAT--------------A..........................................................................................................................................................................................................................................................2111.0010100
..........................................................GTCAGCTGAA-T--AGTA-----CATACTA...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
............................................CTTCGATA------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
....................................................................................................................................................GTGTGTGTGTCT---GCG-TCTGTGCTT----TGT............................................................................................................................................................................................................................................................................................2711.0010100
..........................................................................................................................................TAC-----GTGTGTGTGTGTCT---G...............................................................................................................................................................................................................................................................................................................1820.5011000
dm3
GCGCATCACTCTCTTCATTTGTTACCTGAACGTTACGCCGTGCATTTCGATC------GTCAGCTGAA-T--AGTA-----CATACTATA-----------T--CATATATAAT-----A--TT------TC------AAC-----GTGTGTGTGTGTCT---GCG-TCTTTGCGT----TTTG-TTC-----GCGTCAAAT--------------AAGTAACT--TAA------TTGCG----------------ATTATTC----------------------------------------------------GCAA-CAACAATTATCGATCC----------------TAC-----CCT-TTTTGTTTGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------ACATAGAA----AAAAAC----AAC---A----GGAAAAAATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................GCCGTGCATTTCGATC------GTC......................................................................................................................................................................................................................................................................................................................................................................................................................19143.00430000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000100000000001100001000000000000000010012000100202002000435000300000200100130000000
....................................GCCGTGCATTTCGATC------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................18139.00390000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000040200015001000000000000000000000000000000000000000000000000000000000000010200000100000000000000000000000000000000000000000000000000000200000000000000000010000020000000100000000000000000000111001101100000000101000000000200111000001000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---AA...................................................25138.00380000000000000000000000000000000000000000000000001000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000001200001000220100000000000000000000000000000000010000000000000002001000000100100204000000000000000000000000000000000000000000000000000000000000000000000023000000512000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------A..........................................27127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000020114220000000000000000000000000000000000000000000000000000000000000000000021000000703000000000000000000000000
.......................ACCTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................19119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010110000100110000000000000000000000000000000100110000120000000000200110000010000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---.....................................................23113.00130000000000000000000000000000000000000000001000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
....................................GCCGTGCATTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000100000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000211100000000000000010100000
....................GTTACCTGAACGTTACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000004201000000000000000000000000000000000000000000000000002000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................ATC------GTCAGCTGAA-T--AGTA-----..................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000010000000000000000000000000000000000100004000000000100100000000000000000000000000000
............................AACGTTACGCCGTGCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000010000000000010000010010000000000000010000000000001200000000000000000000000000000000000
................................TTACGCCGTGCATTTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000011020000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---A....................................................2418.0080000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000011000000001000000000000000000000000
................ATTTGTTACCTGAACGTTACGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000200000000100000000000100000000000000
........................CCTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000001000100000000000000100000100000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------AC.........................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002100000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------ACA........................................2916.0060000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................AACGTTACGCCGTGCATTTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000001010000000000100000000000000000000000
....................GTTACCTGAACGTTACGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000100000000100000000110000000000000000
...........................................................................................................................T------TC------AAC-----GTGTGTGTGTGTCT---G...............................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGA--GTGAGTGTATTACAAT--A-----AC--------A---AAA-------...........................................2615.0050000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000200000000000000000000000000
.......................................................................................................................................................................................................AAT--------------AAGTAACT--TAA------TTGCG----------------A..................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCCGTGCATTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000001100000000000000000000001000000000000
..................................................................................................................................TC------AAC-----GTGTGTGTGTGTCT---GC..............................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000200000
.......................................................................................................................................................TGTGTGTCT---GCG-TCTTTGCGT----...............................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA----AAAAAC----AAC---A----GGA.......1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TACGCCGTGCATTTCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000
....................................GCCGTGCATTTCGATC------GTCAGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................GCCGTGCATTTCGATC------GTCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000001000000000000000000
.............................................TTCGATC------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
................................TTACGCCGTGCATTTCGATC------G........................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000001000
..............TCATTTGTTACCTGAACGTTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAC-----CCT-TTTTGTTTGA--GTGAG......................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................GCCGTGCATTTCGATC------GTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000100000001000000000000000000000
.......................ACCTGAACGTTACGCCGTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001000000000000000
................ATTTGTTACCTGAACGTTACGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000
....................GTTACCTGAACGTTACGCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000
............................................TTTCGATC------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATTTCGATC------GTCAGCTGAA-T--AGTA-----C.................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCGTGCATTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
............................................................................................................................................................................................................................................................................................................................................ATCC----------------TAC-----CCT-TTTTGTTTGA--G..........................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000100000000000
............................AACGTTACGCCGTGCATTTCGATC------.........................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000100000000000000000000000000000000000
............................AACGTTACGCCGTGCATTTCGATC------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................TGTGTGTGTGTCT---GCG-TCTTT.......................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TGTGTGTGTGTCT---GCG-TCTT........................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCCGTGCATTTCGATC------GTCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000001000000000000000000000000
....................GTTACCTGAACGTTACGCCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000
................ATTTGTTACCTGAACGTTACGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................GTGTGTGTGTGTCT---GCG-TCTT........................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000
................ATTTGTTACCTGAACGTTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................ATTTGTTACCTGAACGTTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TGTGTGTGTCT---GCG-TCTTTGCGT----T..............................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTATTACAAT--A-----AC--------A---AAA-------ACATA......................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTTGTTACCTGAACGTTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTGA--GTGAGTGTATTACAAT--A-----AC--------.........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................GTGTGTGTGTCT---GCG-TCTT........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AC-----CCT-TTTTGTTTGA--GTGAGTG....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................T-TTTTGTTTGA--GTGAGTGTATTACAAT--A-----...................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCCGTGCATTTCGATC------GTCAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................TCGATC------GTCAGCTGAA-T--AG.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............CATTTGTTACCTGAACGTTACGCCGTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TAA------TTGCG----------------ATTATTC----------------------------------------------------GCAA-CAACA..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCGCATCGCCCGCTTCATTCGCTAACTGATCGTCTTGCCGTACACTTCGATT------GTCAGCTGTT-T--GGCA-----------------TTTCTATAT--AGTATATAGT-----A--TA------TC------AACGT---CTCTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TGGCG----------------ATTGTTCGTGTTT--------------------GTTAAAAAACCAGAAACTAATCTAGCGC--CCAACAATTATCGATCCC---------------TAT-----CCG-TTGTGTGTGA--GTGAGTGCATTGCAAA--T-----AA--------A---ACA----ACAAC--AGCAA--CAAAAAC----AA---CA----GTA---AA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................CTAACTGATCGTCTTGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................19111.001100000011
....................................GCCGTACACTTCGATT------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................1813.0031000020
.....................................................................................................................................................................................................................................................................................................................................ATTATCGATCCC---------------TAT-----CCG-TT.....................................................................................................2012.0020000200
....................................GCCGTACACTTCGATT------GTCAGCTGT................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000020
....................................GCCGTACACTTCGATT------GTC......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0022000000
......................................................................................................................................................................................................GAAT--------------AACTAACTTTTAA------TGGCG----------------ATT................................................................................................................................................................................................................2512.0021000010
.................................CTTGCCGTACACTTCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..................................................................................................ATAT--AGTATATAGT-----A--TA------TC------AACGT---C................................................................................................................................................................................................................................................................................................................................2511.0011000000
.........................................................................................................................................................................................................................................................................................................ACCAGAAACTAATCTAGCGC--CCAAC...............................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................G-TTGTGTGTGA--GTGAGTGCATTGCA.............................................................................2511.0010000100
.................................CTTGCCGTACACTTCGATT------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...........................................................................................................................................................................................................................TAACTTTTAA------TGGCG----------------ATTGTTC............................................................................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................................................................GATCCC---------------TAT-----CCG-TTGTGTGT...............................................................................................2011.0010000010
.............................................................................................................ATAGT-----A--TA------TC------AACGT---CTCTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................2711.0010000100
.................................................................................................................................................................................................................................................................................................................................................................AT-----CCG-TTGTGTGTGA--GTGAGT.....................................................................................2111.0011000000
...................CGCTAACTGATCGTCTTGCCGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.........................................ACACTTCGATT------GTCAGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
........................................TACACTTCGATT------GTCAGCTGT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................................ACACTTCGATT------GTCAGCTGT................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................................................................................................ATAT--AGTATATAGT-----A--TA------TC------AACGT---CT...............................................................................................................................................................................................................................................................................................................................2611.0011000000
............................................................................................................................................CGT---CTCTGTGTGTGTCT---GCG-TCTG........................................................................................................................................................................................................................................................................................................2411.0011000000
..........................................CACTTCGATT------GTCAGCTGTT-..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
........................ACTGATCGTCTTGCCGTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................TTAA------TGGCG----------------ATTGTTCGTGTT.......................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................T---GCG-TCTGTGCTT----TGTG-TTC-----GCA...............................................................................................................................................................................................................................................................................2311.0010000100
........................................................................................................................................................................................................AT--------------AACTAACTTTTAA------TGGCG----------------ATT................................................................................................................................................................................................................2311.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................CG-TTGTGTGTGA--GTGAGTG....................................................................................1911.0010000010
......................................................................................................................................................................................................GAAT--------------AACTAACTTTTAA------TGGCG----------------ATTGTT.............................................................................................................................................................................................................2811.0010000010
..........................................................................................................................TA------TC------AACGT---CTCTGTGTGTGTCT---GC..............................................................................................................................................................................................................................................................................................................2511.0010000100
............................................................................................................................................................................................................................................................................................................................................ATCCC---------------TAT-----CCG-TTGTGTGTGA--GTGA.......................................................................................2511.0010000100
........................................TACACTTCGATT------GTCAGCTGTT-T--GGCA-----------------......................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................TACACTTCGATT------GTCAGCTGTT-T--GG.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
....................................GCCGTACACTTCGATT------GTCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...............................................................................................................................................................................................................................................G----------------ATTGTTCGTGTTT--------------------GTTAAAA...........................................................................................................................................................................2111.0010000100
................................................................................................................................................................................................................................................................................................................................CAACAATTATCGATCCC---------------TAT-----CCG-TT.....................................................................................................2511.0010000100
................ATTCGCTAACTGATCGTCTTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........................................................................................................................................................GTGTGTCT---GCG-TCTGTGCTT----TG.............................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................ATTATCGATCCC---------------TAT-----CCG-TTGTGTGT...............................................................................................2611.0010000010
........................................................................................................................................................GTGTGTCT---GCG-TCTGTGCTT----...............................................................................................................................................................................................................................................................................................2020.5010000100
droYak3
GCACATCGCTCGCTTCATTCGTCAACTGAACGTCTCGCCGTGCACTTCGATC------GTCAGCTGAA-T--GGTA------------T-----TTCTATAT--AGTATATAGT-----T--CA--TATATC------AACGT---CTGTGTGTGTGTCT---GCG-TCTGTGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TGACG----------------ATTGTTCGTGTTC--------------------GTTAGAAAACCAGAAACTAATTTAGCGC--CCAACATTTATCGATCCCT--------------TAC-----CCC-TTGTGTGTGA--GTGAGTGCATTACAAA--A-----AA--------A---A-------------ATAATAATAAAAAG----AA---CA----GGA---AA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................CTTCGATC------GTCAGCTGAA-T--GGTA------------...........................................................................................................................................................................................................................................................................................................................................................................................23117.0017000000000017
................ATTCGTCAACTGAACGTCTCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00330000000000
....................................GCCGTGCACTTCGATC------GTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201001000000
.........................................GCACTTCGATC------GTCAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000
.......................................................................................................................................................................................................................................................................................................................................TATCGATCCCT--------------TAC-----CCC-TTGTGTGT...............................................................................................2511.00100000010000
..........................................................................................................................................................................GTGCTT----TGTG-TTC-----GCATTGA...........................................................................................................................................................................................................................................................................2011.00101000000000
.......................................GTGCACTTCGATC------GTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
....................................................................................................................................................................CG-TCTGTGCTT----TGTG-TTC-----GCATT.............................................................................................................................................................................................................................................................................2311.00100000010000
................ATTCGTCAACTGAACGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....................................CCGTGCACTTCGATC------GTCAGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
...........................................ACTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
............................................CTTCGATC------GTCAGCTGAA-..............................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
................................................GATC------GTCAGCTGAA-T--GGTA------------T-----T....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................AACTTTTAA------TGACG----------------ATTGTTCGT..........................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................TTTAGCGC--CCAACATTTATCG.......................................................................................................................................2111.00100000010000
......................CAACTGAACGTCTCGCCGTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
....................GTCAACTGAACGTCTCGCCGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................GAACGTCTCGCCGTGCACTTCGATC------.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................................CGTGCACTTCGATC------GTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..........................................................................................................................CA--TATATC------AACGT---CTGTGTGTGTGTCT---GC..............................................................................................................................................................................................................................................................................................................2911.00100000010000
................................................GATC------GTCAGCTGAA-T--GGT........................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....................................GCCGTGCACTTCGATC------GT.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATAAAAAG----AA---CA----GGA---A...2011.00100010000000
....................................GCCGTGCACTTCGATC------GTC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
............................................CTTCGATC------GTCAGCTGAA-T--GGT........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................CGATC------GTCAGCTGAA-T--GGT........................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................GTCAACTGAACGTCTCGCCGTGCACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
.........................................GCACTTCGATC------GTCAGCTGAA-T--GGT........................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
GTGCATCATTCGCGATATTCGTTTACTGAACGCCGCGTCGTGAACTTCGATCGCTTCGGTCAGCTGTAGTAC---------AATAGTAAAATAATACTATAT--AGA-----------AA----------TC--TATTTGT-----GTTTATGTGTGTCT---GTG-TAAGAGCTT----TGTG-TTC-----GCATTGAAT--------------AACTAACTTTTAA------TTGGG----------------ATCGTA------C--------------------TTTAAAGAACCATAAAAACTTCTTTCGC--TAA-AAAATATCTATTG----------------TAC-----CT--------------GTTAGTGCATTCGAAA--A-----AA----GC--A---AAA-------AC--AAAA---CAAAAAT----ACAAAGA----GAA---AG--SizeHit CountTotal NormTotal
No Reads
droBia1
GCGCATCGTTCGCGACAGTCGCCTACTGAACTGAACGCCGCGCACTTCGATCGC--CCGTCAGCTGCAATAC--TT-----AACGCTATACCTATACTATAT--AG-------T-----C--CG------TA------TCT-----GTCTGTTCGTGTCT---GTG-TCTGCGCTT----TCTG-TTC-----GCC---AAT--------------AACTAACTTTTAA------GTGCG----------------ATCGTA------C--------------------TGTAGGAAAC-AGAGTA--AT--TCCGC--CTAACGATTATCGGTCA----------------TAG-----CCT-TT--GTGTGG--CTGAGTGCATTGGAAA--A-----AC--------A---AAA------------------AACAACCAA-A---AAAA----GAC---CA--SizeHit CountTotal NormTotal
No Reads
droTak1
GCGCATCATTCGCGTCATTCGTTCACTGAACGTCGCGCCGTGCACTTCGATT-----CGTCAGCTGCAATTC--CTAACGCTATACTATA-----TCTATAT--AGTCTAT------------A------AA--GA--TCCGT---GTGTGTGTGTGTCT---GTG-TCTGGGCTT----TGTG-TTC-----GCA---AAT--------------AACTAACATTTAA------TTGCG----------------ATCGTG------C--------------------TTTAGGAAAT-AGAAAC--AT--TTCGC--AAAACGATTATCGATCC----------------TAG-----CCT-TT--GTGTGA--GTGAGTGCAGTAAAAC--A-----AC--------A---AAA-------A-ATACAAA-------------------A----CAA---AA--SizeHit CountTotal NormTotal
No Reads
droEle1
GCGCATCGTTCGCT-TATTCGTTAGCTGAACGTCGCGCCGTGCACTTCGATC------GTCAGCTGCAC---TG-----------CT------GTTCTATAT--AGTATAAACATTTATG--TA------TG------TAC-----GTCTGTGTGTGTCT---CTG-CCTGAGCTT----TGTG-TTC-----GCGTTGAATAACAAAAAATAAATAACCAACTTTAAA------TTGCG----------------ATCGTA------C--------------------TATAGAAAATCAGTAAC--AA--TTCGCAACTCGC-GATATCAATCC----------------TAC-----CCCACT--GTGTGATAAAAAGTGCATAAAAAG--------------------------------ACAAC--AA--AATAAATAAAAA---AAA----ACA---AA--SizeHit CountTotal NormTotal
No Reads
droRho1
GCGCATCGTCTGT-TTATTCGTTGGCTAAACGTCGCGTCGTGCACTTCGATC------GTCAGCTGCTC---TG-----------AT------ATTTTATAT--ATTATAT----TGATA--TA------TGTACA--TGCGTCCCGTCTGTGTGTGTCT---G---GTTGAGCTT----TGTG-TTC-----GCGTTAAAT--------------ATCTAA------A------CTGCG----------------ATCGTA------T--------------------TATAAAAAATCAGT---------TAAAT---CAACAGATAGCAATCC----------------TAC-----CCT-TT--GTGTGA--GTGAGTGCATAAAAT-----------------------------------------------AGA----------CA----ACA---AA--SizeHit CountTotal NormTotal
No Reads
droFic1
CTGCATCGTTCGCCTTATTCATTTACTAAACGTAGCGCGGTGCACTTCGAT---------CAGCTGCGC---GA-----------CT------ATTCTATAT--AGTAT----------A--TG------TA------TAC-----GTCTGTGTGCTTCT---CTG-GTTAAGCTT----TGTG-TTT-----GCGTTGAAT--------------AACTAACTTTTTA------TTGCG----------------ATCGTA------C--------------------TTCAGAAAACCAAAAAC--GT--TTAAC--CATACAAATATCGATCT----------------TTC-----CC--TT--GTGTGA--GTGAGTGTATTGAAAA--------------------------------------------AAAGAC----AAC---A----AAAAAAAA--SizeHit CountTotal NormTotal
No Reads
droKik1
ACGGATCGTTCGCTTTATTTGCTACTGGAACGTCGCGGCGTGCACTTCGAT---------CAGCTGCACTTCTG-A-----G-----------AAACTATAT--AGTCTAT------------A----TAAC--CG--TTC-----GTGTGTGTGTGTGTGCTGTGCTGTGCGCTT----TGTG-ATC-----GCGTTAAAT--------------ATCTAACTTGTAA------TTGCT------------------TACA------C--------------------TTTAGCA---------------------------TA---AGC------------------------------------TATTTAG--------GC----------A-----ACGTAAGCACGAAAAAA-------ACGTAAAAA--C--------------AAC----TAC---GA--SizeHit CountTotal NormTotal
No Reads
droAna3
A----TCGTTCTCTTTATTGCTTGACCAACCGTCGTCGCGAGCAGTTGATTC-----CGTACCCAG---T--------------ACTATAT-----ATATATATAATTTAC----CGATAATTTTTTACACT------AGCGT---C-TTGTGTGTATTT---GTG-C-----CTT----TGTG-TTC-----ACGTTAAAC--------------AACTAATATTTAA------TTACT----------------ATTGAAAC----C-------------------TTCTAGAAACT-CGAACC---TCTTTCGC--CTAACA-ATATCGAACC----------------TTA-----CCT-TT--GTGA------AAGTGCAATAAATC--G-----CT--------A---AAA-------AC----AA---GAAAACTAA-A---AAAA----ATA---TA--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................GTTGATTC-----CGTACCCAG---T--------------ACTATA.........................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................TTACACT------AGCGT---C-TTGTGTGTATTT---GTG-............................................................................................................................................................................................................................................................................................................2811.001000010
.......................GACCAACCGTCGTCGCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................CGAACC---TCTTTCGC--CTAACA-A............................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................CA-ATATCGAACC----------------TTA-----CCT-TT--GTG................................................................................................2311.001010000
.....................TTGACCAACCGTCGTCGCGAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.......................................................................................................................................................TGTGTATTT---GTG-C-----CTT----TGTT-..........................................................................................................................................................................................................................................................................................2090.111010000
droBip1
AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAAA--A-----AA--------A---TAA-------AAAGAGAAA--AACAAAC----AAA---A----GAAAATAA--SizeHit CountTotal NormTotal
No Reads
dp5
ACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--A-----AG--------A---GAG-------ACACATAAAAAAAAAAA----GA---GAA----GGA---AA--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATGTGT-----------------------------------------------------------------------------------------------------------------------------G------TGT-----GTGTGTGTGTGTGT---GTG-TGTGTGTAT----TGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................TGT-----GTGTGTGTGTGTGT---GTG-TGTGTGT.....................................................................................................................................................................................................................................................................................................27200.051010000
droWil2
ATACGAAAA--------------------------------------------------------------------------------------------------------------C--TC------TC------TAC-----GTGTGTGTGTGTCT---GCG-TGT-----T----TGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT--GTGAGT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................GCG-TGT-----T----TGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT--GT.........................................................................................18200.15301110
.....................................................................................................................................................................G-TGT-----T----TGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGT--GTGA.......................................................................................18200.05100001
droVir3
T------------------------------------------------------------------------------------------------------------------------------------------AT-----GTGTGTGTGTGTGT---GTG-TGTCTGTTT----TTTG-CTC-----AGC---AAA--------------C---AGAAATTAA------AGCCA----------------AACA----------------------------TAGAAAAAAAA-AGAACA---GACGCAGT--AGAACA-AAAGCCAACCG-AGCAGGAAAAAACCGACGCATGAC--A------------CAAAT----TCACAA--A-----AG--------G---TGGAAAAACAAA--AACGA--CAAAACGAC-A---AAAATCTACATGGAAATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................GTGTGTGT---GTG-TGTCTGTTT----...............................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
droMoj3
T--------------------------------------------------------------------------------------GTAT-----CTATGT-------GTG---------------------------------------CGTATGTTT---GTG-TGT-----GTGTGTGTGTGTGAGTCTGTG-------------------------------------------------------------TTGCTTGTATTTGTAATAAAAGCGATGAAAATGGCAACAACA-ACAACA---ATGACAGC--AGAA-----AGGAAAACG-AAA------------------------------TGG--CAAAATAAATTGAAAG------------------A---GAA-------ACAAATAAAA-ATCAACGAG-A---AAAAGGCTGCGGAAAA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T----------------------------------------------------------------------------------------------------------------------G--TG------TG------TGT-----GTGTGTGTGTGTGT---GTG-TGTGTGTCC----TGTG-TGT-----GCATGGAAG--------------AGTTCGAT--AAATTTCAATTACTAACCCAATTAAAAAATGTTGTACG----C-------------------TTTTAGGAGCC-CGAA---------------------------------------------------------------------------------------AAATAAAACGC--------G---ACA-------ACGTATAAA--AATAAAT----GTT---G----GCAAAAAA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:38 AM