ID:

dsi_8751

 Coordinate:

x:1526548-1526697 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.3 -41.2 -41.2

Flybase annnotation

five_prime_UTR [x_1525213_1526547_+]; exon [x_1525213_1526547_+]; intron [x_1526548_1528091_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGACACTCTGCCGATACAGCGAAGTAAAAATTAATAATTAGAGCCAAGAGGTATGCAGTAGCCAGAAAAGAACAGAACCCAATATACATATGCACACACCTGCAGCCGTGTGTGTGTGTGTATGTGTCGTTGTATATGGCGTATCGCAATCATGCAAATAAAAGGCAAGCGACGAAAGTCAATAGATTTTATAGGTATTCTGTCCCGAAATAGGAGCAATTCCCCCAGATAAGTGCCGCAAAACGGCATA
**************************************************...(((.(((((((.......((((......((((((((((((((((((........))))))))))))))))))....))))...)))).))).)))...((((..((((((.......(((....)))......))))))..))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 O001
Testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
....................................................................................TACATATGCACACACCTG.................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................GAGCAATTCCCCCAGATAAG................. 20 0 1 1.00 1 0 1 0 0 0
......TCTGCCGATACAGCGAAGTAAAAA............................................................................................................................................................................................................................ 24 0 2 0.50 1 0 0 1 0 0
..............................................................................................................................................................TAAAAGTCAAGCAATGAAAGTC...................................................................... 22 3 3 0.33 1 0 0 0 1 0
.................................................................................................................GCGTTTGTATGTGTCGTTGT..................................................................................................................... 20 2 8 0.13 1 0 0 0 0 1

Anti-sense strand reads

ACTGTGAGACGGCTATGTCGCTTCATTTTTAATTATTAATCTCGGTTCTCCATACGTCATCGGTCTTTTCTTGTCTTGGGTTATATGTATACGTGTGTGGACGTCGGCACACACACACACATACACAGCAACATATACCGCATAGCGTTAGTACGTTTATTTTCCGTTCGCTGCTTTCAGTTATCTAAAATATCCATAAGACAGGGCTTTATCCTCGTTAAGGGGGTCTATTCACGGCGTTTTGCCGTAT
**************************************************...(((.(((((((.......((((......((((((((((((((((((........))))))))))))))))))....))))...)))).))).)))...((((..((((((.......(((....)))......))))))..))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M025
embryo
 M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
.............................................TTCTCCATACGTCATCGGTCT........................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................................ACGTTTATTTTCCGTTCGCTG............................................................................. 21 0 2 0.50 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................................TCGCTGCTTTCAGTTATCTGGA............................................................. 22 2 2 0.50 1 0 0 0 1 0 0 0 0
.......GACGGCTATGTCGCTTCATTTTTA........................................................................................................................................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0
............................................GTTCTCCATTCGTCAT.............................................................................................................................................................................................. 16 1 2 0.50 1 1 0 0 0 0 0 0 0
............................................GTTCTCCATGCGTCA............................................................................................................................................................................................... 15 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................CGTGTCTTGGGTTCTATGT.................................................................................................................................................................. 19 2 4 0.25 1 0 0 0 0 0 1 0 0
............................................GTTCTCCATGCGTCATT............................................................................................................................................................................................. 17 2 5 0.20 1 1 0 0 0 0 0 0 0
...........................................CGTTCTCCATGCGTCA............................................................................................................................................................................................... 16 2 20 0.15 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGACAGGGGTTTATC..................................... 15 1 10 0.10 1 1 0 0 0 0 0 0 0
.............................................................................................................................CAGCAGCATAAACCGCATC.......................................................................................................... 19 3 20 0.10 2 0 0 2 0 0 0 0 0
..............................................................................................................................................................................................TTTCAATAAGACAGGGCTCT........................................ 20 3 12 0.08 1 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................GGTCTAGTCGCGGCGTTTA....... 19 3 18 0.06 1 0 0 0 0 0 1 0 0
........................................................................................................CGGCACACACACACACA................................................................................................................................. 17 0 19 0.05 1 0 0 0 0 0 0 1 0
.............................................TTCTCCATGCGTCAG.............................................................................................................................................................................................. 15 2 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CCGGCGTTTTGCCGT.. 15 1 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................TCCCGTTCGCTGGTTTC........................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 1
............................................GTTCTCCATGCGTCAG.............................................................................................................................................................................................. 16 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:1526498-1526747 + dsi_8751 TGACACTC--TGCCGATACAGCGAAGTAAAAATTAATAATTAGAGC-----------------------------CAAGAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---ATAT----------------------------------------------------------------GCACACACC----TGCAGCC---GTGT--GTGTG------TG--TGTATGTGTCGTT--------------GTATATGGCG---------TATCGCAATCATGCAAA----------TAA-AAGGCAAGC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTCTGTCCCGAAATAGGAGCAA-------------------TTCCCCCAGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATA
droSec2 scaffold_10:1462476-1462731 + dse_746 TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGCA-----C---------------------GGAACCCAA-------------T------------------------------AT-----------AC---ATAT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTATGTGTCGTG--------------GTATATCGCG---------TATCGCAATCATGCGAA----------TAA-AAGGAAAGC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTATCCCGAAATAGGAGCAA-------------------TTCCCCCAGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATA
dm3 chrX:1668206-1668461 + TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---ATGT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTATGTGTCGTT--------------GTATATCGCG---------TATCGCATTCATGCAAA----------TAA-AAGGCAAGC----GACGGAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCAA-------------------TTCCCCCCGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATA
droEre2 scaffold_4644:1645196-1645443 + TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------GGAACCCAACGGTAC------AT------------------------------AT-ACGCGCTC---------AT----------------------------------------------------------------GCACACATC----TGCAGC---------------------TG--TGTATGTGCCGTT--------------G----TCGCG---------TATCGCATTAATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCGA-------------------TTCCCCCCGGTA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATA
droYak3 X:1513415-1513674 + TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------GGAACCCAACGGTAC------AT------------------------------AT-ACGCGCTC---------AT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTG----TG--TGTATGTGT---T--------------GTATATCGCG---------TATCGCATTCATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCAA-------------------TTCCCCC-GATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATA
droEug1 scf7180000408994:396062-396458 + TGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTTTCACAA-GCA-------------AAAAAGGTATGCAGTA--GCCAACAGAACAGAA-----C---------------------AGAACAGAACGGAG-ACCGAGACCATCACATCGTACATACAATGTGCATACATAT-ATACG-------------------------------------------------TACGTACGTACATACATACATAGATATATATATATATGTGCAGGCAGTC---GTAT--GTATGTATGTATG--TATTTGTGTCGTT--------------GTAAATCGGG---------CA-----TTTATGCAAAATACTCGTAATATATAGGCAAAA----GATACAAAACATA-GGTGGATCTCCTTATA-------GTAGGTAAAACATATTCCAGATAT------GTTGTTCGATCTTAATG-----TTATCTTTTC-TAA--------------------------------------------------------------GCTT---GAGATAC----TTTCG---------------------TTATACTATTATAC---TAT-------------------------AT-AT------GTA
droBia1 scf7180000301760:4257669-4257996 + TGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCCC--AA-GC---------------AAAAGGTATGCAGTA--GCCAGA---AAA--CCGAA-AA---CAG----AAAACCGAAAAGAACACAA-------------A------------------------------GTA------TCATGC---ACACACACGC----------------------------------------------------------AGCTACATG----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTGT------------------------GCAAGGGG---------CA-----TT--TGCAAA----------TAA-AAGGCGAAAAATAGACAAAAGTCAATAG---------GTGTTACAGGGTAGCGCG----------------------------------------TCG-----AATGTGTTC-G-AACGGGAGCAG-------------------AT------GATATGTTGATGGGCCCCTCATCACGCCGCGGAAGGTGC----CCGTG---------------------GTGG-GCACCCTAA---CGG-------------------------ACGGG------TGG
droTak1 scf7180000415704:1261066-1261312 + TCAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCGC--TA-GCG-------------AAAAAGGTATGCAGTAGAGCCAAA---AAAACA-----C---------------------AGAACGCAA-------------C------------------------------AT-----------AC---ATACAT--------------------------------------------------------------CTGTACATG----TGCAGCC---GTGT--AGG-------GTA--TGTATGTGTGGTT--------------GTATATCGGG---------CAT----TTTATGCAAA----------TCT-AAGGCAAAA----GATACAGGGTATC-CGT-------------------------------------CAGATATCAGATAG--------------------TTGTGATGTTCTATATTAGATG-------------------------------------------------------------------------------------------------------------------------------------------GTACATCGCT------GTA
droEle1 scf7180000491043:251373-251500 + TGACACTCTTTGCCGATATAGCTTAGTAAAAATCAATAATTAGAGCTCGTTCCC--AA-GCA-------------AAAAAGGTATGCAGTA--GCCAGA-GAACAGAA-----CAAA---TCGGCAC-----------------------------AC------------------------------------------------AAAA----------------------------------------------------------------ACACA--------------------GT--GTGTG------CA--TGTATGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779976:69188-69555 - TGTCCCTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCTC--AA-GCA-------------AAAAAGGTATGCAGTA--GCCAGA---ACAGAA-----TAAA---TCGGCAC-----------------------------ACAAA-AC-----A--CACAGC----------GT-----------G-CAT--GTAT--------------------------GTGCGCGCAC-----CACACACAT------------ACACATACC---ATGCAGCC---GTGT--ATGTACA----TA--TGTATGTGTCGCT--------------GAATATTGGG---------CA-----TTTATGCAAA----------TAA-AAGGCAAAA----GATAAAAGTCGAAAG-AGGTTTCGATTTTA---------------------------------------------------GTTAAAGGTATT------CAAAGCAAGGGCATCCTCGGATGCGGATGCGAATGCTCCC-AATCCG-------------------TCCC---GTGAATCTCCTTTCCG---------------------CCCTGCAAATAAAATATCGGGTTGGTGGAAAGTAGATGCTGCAG--------------A
droFic1 scf7180000453253:107601-107816 + TGAAAC----TGCCGATACATCGAAGTAAAAATCAATAATTAGAGCTCTTTCAC--A--GC--------------AAAAAGGTATGCAGTA--GCCAAA---ACAGAA-----TAAATCATCGGTAC-----------------------------ACAAA-AC-----A--C----------------------G-------CC-------------------------------------------------------------------------A-GTG----TGCAGCC---GTGC--GTGTGTA------------TGTATTGCT--------------GTGTGTTGGA---------CA-----TTTATGCAAA----------TAA-AA-----------------AGTCGATAA-AGGTTTCGATTTTG---------------------------------------------------GCG-----TTTGGTATCC-TAAATAAGAGCAG-------------------CT--------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302398:409792-410019 - C---------TACCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCCC--AAAGCAAAAGCAAACGCAAAAAAAGGTATGCAGTA--GCAAAA-----AGAACAAAAC----CATTGGCACAACC----AAAAACCAA-------------C------------------------------AC-----------AC---ACACAC--ACTCACACTAGAGTATGCATGTGTGTGC--------------------------------ACATACATA----CGAAGCCAAAGTGT--ATC--------TA------TGTA----TTTTAT--------------CTTTGTATTTTGGGCA-----TTAATGCAAA----------TAA-AAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13248:1205030-1205114 - A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------AT-----------A-CAT--ATAT----------------------------------------------------------------ATA--------TA--TAT---GTAT--ATATATATATATA--TATATATATAACT--------------ATATGGTAAG---------CACTGCAATCG----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG---------------CAAGTTAAGG
dp5 4_group3:8270859-8270974 + G--------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAAGAGA-----AA--ACCAAA---CAATAA-----C---------------------AAAAT-----------------------------A--C---------------GTT------TC--G-TGT--TCGC----------------------------------------------------------------GCG--------CGCGTCT---GTGT--GTGTGTGTGTGTG--TGTGCTTGGCGTT--------------GTGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_18:1657536-1657710 - CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------A-CAC--ACACACAC----------------------------------------------------------ACACACA----------TGT---GTGC--ACATGTATGTAGA--TTTATTTGTTGAT--------------ATCCTTTAAGCAATTAAGACC-----TATTTGCATA----------TTA-AA-----------------AATTGATTA-AATTTTCAG------------------------------------------------------------------------CC----------------------------------------------------------------AAGCTTCAGAGCATGC----CCAACCGAAAACGAAAGTAAAACCAAAAGA-AAACCCA------------------------------AAATGAAA------GTT
droWil2 scf2_1100000004590:2778369-2778418 + A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------CT-----------A-CAT--ATGT----------------------------------------------------------------ACA--------CA----C---ATGTGTGTGTGTG----TA--TGTAT----------------------GTATATTGCA---------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:9715751-9715831 + A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------GT-----------A-TAT--GTGC----------------------------------------------------------------GTG--------TGC--GT---GTGT--GTGTGTGTGTGTG--TGTGTGCGTAGTA--------------GTAAAC---G---------CA-----C-TTTGCAAG----------TGG-GTGGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG
droMoj3 scaffold_6540:8587273-8587369 - AACG------------------------------------------------------------------------------------------------------GA-----C---------------------GTGACC------------------------------------------------C-----------AT---GTGT----------------------------------------------------------------GCATGTGTC----TGCCAAC---CTGT--GTGTGTGTGTGTG--TGTGTGTGTGAGC--------------GTTTATTGCG------------------------GC----------TAA-TTAAAAA----CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------ATG
droGri2 scaffold_14906:12094490-12094564 - G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--GTGTGTGTGTGTGTGTGTCTGTGT--GTGTTGACTTGATATTATGA-----A---------C--------TAGCAAAC----------CGG-CACCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---------------CAA------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGACACTC--TGCCGATACAGCGAAGTAAAAATTAATAATTAGAGC-----------------------------CAAGAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---ATAT----------------------------------------------------------------GCACACACC----TGCAGCC---GTGT--GTGTG------TG--TGTATGTGTCGTT--------------GTATATGGCG---------TATCGCAATCATGCAAA----------TAA-AAGGCAAGC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTCTGTCCCGAAATAGGAGCAA-------------------TTCCCCCAGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................T-----------AC---ATAT----------------------------------------------------------------GCACACACC----TG...................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAA-------------------TTCCCCCAGATA---------------------------------------------------------------------------------------------------AG.......................2011.00100001000000000000
......TC--TGCCGATACAGCGAAGTAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000000010000
droSec2
TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGCA-----C---------------------GGAACCCAA-------------T------------------------------AT-----------AC---ATAT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTATGTGTCGTG--------------GTATATCGCG---------TATCGCAATCATGCGAA----------TAA-AAGGAAAGC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTATCCCGAAATAGGAGCAA-------------------TTCCCCCAGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................TGTGTGTGTG--TGTATGTGTCG...........................................................................................................................................................................................................................................................................................................................................................2112.0020011
................................................................................GGTATGCAGTA--GCCAGA---AAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...............................................................................................................................................................................................................TAT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--G....................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
....................................................................................................................................................................................................................................................................................................................TGTGTGTG--TGTATGTGTCGTA--------------...........................................................................................................................................................................................................................................................................................................................................2130.3310001
...........................................................................................................................................................................................................................................................................................................GT--GTGTGTGTGTGTG--TGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................24170.0610100
...........................................................................................................................................................................................................................................................................................................GT--GTGTGTGTGTGTG--TGTATG................................................................................................................................................................................................................................................................................................................................................................21200.0510010
................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG--TGTATGTG..............................................................................................................................................................................................................................................................................................................................................................20200.0510010
dm3
TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---ATGT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTATGTGTCGTT--------------GTATATCGCG---------TATCGCATTCATGCAAA----------TAA-AAGGCAAGC----GACGGAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCAA-------------------TTCCCCCCGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ACACTC--TGCCGATACAGCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AGA---AAAGAA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATC----TGCAGCC---GTGT--GTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTGTGTGTG--TGTATGTGTCG...........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCCCGATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGG..........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GACACTC--TGCCGATACAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGACACTC--TGCCGATACAGCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCAATAATTAGAGC-----------------------------AAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...CACTC--TGCCGATACAGCGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACTC--TGCCGATACAGCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GTATGTGTCGTT--------------GTATATCGCG---------........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TG--TGTATGTGTCGTT--------------GTATATC....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGCAGTA--GCCAGA---AAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TC--TGCCGATACAGCGAAGTAAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AA-----C---------------------AGAACCCAA-------------T------------------------------AT-----------AC---ATGT----------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......C--TGCCGATACAGCGAAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACTC--TGCCGATACAGCGAAGTAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CACATC----TGCAGCC---GTGT--GTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............CGATACAGCGAAGTAAAAATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.GACACTC--TGCCGATACAGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GAGC-----------------------------AAAAAGGTATGCAGTA--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATACAGCGAAGTAAAAATCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATC----TGCAGCC---GTGT--GTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACACTC--TGCCGATACAGCGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TT--------------GTATATCGCG---------TATCGCATTC..............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCATGCAAA----------TAA-AAGGCAAGC----GA..........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TC----TGCAGCC---GTGT--GTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.GACACTC--TGCCGATACAGCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTGTCCCGAAATAGGAG..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TC----TGCAGCC---GTGT--GTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAA----------TAA-AAGGCAAGC----GACGGAAG....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTGTGTG--TGTATGTGTCGTT--------------GT.........................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGTG--TGTATGTGTCGTT--------------G..........................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG--TGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCC---GTGT--GTGTGTGTGTGTG--......................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000100000
..................................................................................................................................................................................................................................................................................................AGCC---GTGT--GTGTGTGTGTGT.........................................................................................................................................................................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGT--GTGTGTGTGTGTG--TGTA..................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000
................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG--TGTATGTG..............................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000
............................................................................................................................................................................................................................................................................................................T--GTGTGTGTGTGTG--TGTA..................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCC---GTGT--GTGTGTGTGTGTG--TG....................................................................................................................................................................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...................................................................................................................................................................................................................................................................................................GCC---GTGT--GTGTGTGTGTGTG--T.....................................................................................................................................................................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................C---GTGT--GTGTGTGTGTGTG--TGTAT.................................................................................................................................................................................................................................................................................................................................................................23160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTG--TGTATG................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTGTGTGTGTG--TGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTGTGTGTG--TGTATGTG..............................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CC---GTGT--GTGTGTGTGTGTG--T.....................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................T--GTGTGTGTGTGTG--TGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................T--GTGTGTGTGTGTG--TGTATG................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................C---GTGT--GTGTGTGTGTGTG--TGT...................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................T--GTGTGTGTGTGTG--TGTATGTG..............................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GT--GTGTGTGTGTGTG--TGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------GGAACCCAACGGTAC------AT------------------------------AT-ACGCGCTC---------AT----------------------------------------------------------------GCACACATC----TGCAGC---------------------TG--TGTATGTGCCGTT--------------G----TCGCG---------TATCGCATTAATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCGA-------------------TTCCCCCCGGTA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................GTAC------AT------------------------------AT-ACGCGCTC---------AT----------------------------------------------------------------GCAC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................ACCCAACGGTAC------AT------------------------------AT-ACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
................................................................................................................................................................................................................................................................................................GCAGC---------------------TG--TGTATGTGCCGTT--------------G----TC....................................................................................................................................................................................................................................................................................................................................2311.0010100000
droYak3
TGACACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGC-----------------------------AAAAAGGTATGCAGTA--GCCAGA---AAAGAA-----C---------------------GGAACCCAACGGTAC------AT------------------------------AT-ACGCGCTC---------AT----------------------------------------------------------------GCACACATC----TGCAGCC---GTGT--GTGTGTG----TG--TGTATGTGT---T--------------GTATATCGCG---------TATCGCATTCATGCAAA----------TAAAAAGGCAAAC----GACGAAAGTCAATAG---------ATTTTATAG-------------------------------------------------------GTATTGTGTCCCGAAATAGGAGCAA-------------------TTCCCCC-GATA---------------------------------------------------------------------------------------------------AGTGCCGCAAAACGGC------ATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................G---------ATTTTATAG-------------------------------------------------------GTATTGTGTCC.........................................................................................................................................................................2111.00101000000000
droEug1
TGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTTTCACAA-GCA-------------AAAAAGGTATGCAGTA--GCCAACAGAACAGAA-----C---------------------AGAACAGAACGGAG-ACCGAGACCATCACATCGTACATACAATGTGCATACATAT-ATACG-------------------------------------------------TACGTACGTACATACATACATAGATATATATATATATGTGCAGGCAGTC---GTAT--GTATGTATGTATG--TATTTGTGTCGTT--------------GTAAATCGGG---------CA-----TTTATGCAAAATACTCGTAATATATAGGCAAAA----GATACAAAACATA-GGTGGATCTCCTTATA-------GTAGGTAAAACATATTCCAGATAT------GTTGTTCGATCTTAATG-----TTATCTTTTC-TAA--------------------------------------------------------------GCTT---GAGATAC----TTTCG---------------------TTATACTATTATAC---TAT-------------------------AT-AT------GTASizeHit CountTotal NormTotal
No Reads
droBia1
TGAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCCC--AA-GC---------------AAAAGGTATGCAGTA--GCCAGA---AAA--CCGAA-AA---CAG----AAAACCGAAAAGAACACAA-------------A------------------------------GTA------TCATGC---ACACACACGC----------------------------------------------------------AGCTACATG----TGCAGCC---GTGT--GTGTGTGTGTGTG--TGTGT------------------------GCAAGGGG---------CA-----TT--TGCAAA----------TAA-AAGGCGAAAAATAGACAAAAGTCAATAG---------GTGTTACAGGGTAGCGCG----------------------------------------TCG-----AATGTGTTC-G-AACGGGAGCAG-------------------AT------GATATGTTGATGGGCCCCTCATCACGCCGCGGAAGGTGC----CCGTG---------------------GTGG-GCACCCTAA---CGG-------------------------ACGGG------TGGSizeHit CountTotal NormTotal
No Reads
droTak1
TCAAACTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCGC--TA-GCG-------------AAAAAGGTATGCAGTAGAGCCAAA---AAAACA-----C---------------------AGAACGCAA-------------C------------------------------AT-----------AC---ATACAT--------------------------------------------------------------CTGTACATG----TGCAGCC---GTGT--AGG-------GTA--TGTATGTGTGGTT--------------GTATATCGGG---------CAT----TTTATGCAAA----------TCT-AAGGCAAAA----GATACAGGGTATC-CGT-------------------------------------CAGATATCAGATAG--------------------TTGTGATGTTCTATATTAGATG-------------------------------------------------------------------------------------------------------------------------------------------GTACATCGCT------GTASizeHit CountTotal NormTotal
No Reads
droEle1
TGACACTCTTTGCCGATATAGCTTAGTAAAAATCAATAATTAGAGCTCGTTCCC--AA-GCA-------------AAAAAGGTATGCAGTA--GCCAGA-GAACAGAA-----CAAA---TCGGCAC-----------------------------AC------------------------------------------------AAAA----------------------------------------------------------------ACACA--------------------GT--GTGTG------CA--TGTATGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTCCCTC--TGCCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCTC--AA-GCA-------------AAAAAGGTATGCAGTA--GCCAGA---ACAGAA-----TAAA---TCGGCAC-----------------------------ACAAA-AC-----A--CACAGC----------GT-----------G-CAT--GTAT--------------------------GTGCGCGCAC-----CACACACAT------------ACACATACC---ATGCAGCC---GTGT--ATGTACA----TA--TGTATGTGTCGCT--------------GAATATTGGG---------CA-----TTTATGCAAA----------TAA-AAGGCAAAA----GATAAAAGTCGAAAG-AGGTTTCGATTTTA---------------------------------------------------GTTAAAGGTATT------CAAAGCAAGGGCATCCTCGGATGCGGATGCGAATGCTCCC-AATCCG-------------------TCCC---GTGAATCTCCTTTCCG---------------------CCCTGCAAATAAAATATCGGGTTGGTGGAAAGTAGATGCTGCAG--------------ASizeHit CountTotal NormTotal
No Reads
droFic1
TGAAAC----TGCCGATACATCGAAGTAAAAATCAATAATTAGAGCTCTTTCAC--A--GC--------------AAAAAGGTATGCAGTA--GCCAAA---ACAGAA-----TAAATCATCGGTAC-----------------------------ACAAA-AC-----A--C----------------------G-------CC-------------------------------------------------------------------------A-GTG----TGCAGCC---GTGC--GTGTGTA------------TGTATTGCT--------------GTGTGTTGGA---------CA-----TTTATGCAAA----------TAA-AA-----------------AGTCGATAA-AGGTTTCGATTTTG---------------------------------------------------GCG-----TTTGGTATCC-TAAATAAGAGCAG-------------------CT--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
C---------TACCGATACAGCGAAGTAAAAATCAATAATTAGAGCTCGTTCCC--AAAGCAAAAGCAAACGCAAAAAAAGGTATGCAGTA--GCAAAA-----AGAACAAAAC----CATTGGCACAACC----AAAAACCAA-------------C------------------------------AC-----------AC---ACACAC--ACTCACACTAGAGTATGCATGTGTGTGC--------------------------------ACATACATA----CGAAGCCAAAGTGT--ATC--------TA------TGTA----TTTTAT--------------CTTTGTATTTTGGGCA-----TTAATGCAAA----------TAA-AAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------AT-----------A-CAT--ATAT----------------------------------------------------------------ATA--------TA--TAT---GTAT--ATATATATATATA--TATATATATAACT--------------ATATGGTAAG---------CACTGCAATCG----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG---------------CAAGTTAAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................ATAACT--------------ATATGGTAAG---------CACTGCAAT...............................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................................ATAACT--------------ATATGGTAAG---------CACC....................................................................................................................................................................................................................................................................................................................2011.001010000
dp5
G--------------------CAAACCAAAAACCAAAAACCAAAAA-----------------------------AAAAAGAGA-----AA--ACCAAA---CAATAA-----C---------------------AAAAT-----------------------------A--C---------------GTT------TC--G-TGT--TCGC----------------------------------------------------------------GCG--------CGCGTCT---GTGT--GTGTGTGTGTGTG--TGTGCTTGGCGTT--------------GTGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................TGTGTGTGTG--TGTGCTTGG.............................................................................................................................................................................................................................................................................................................................................................19200.1530300000000
............................................................................................................................................................................................................................................................................................................T--GTGTGTGTGTGTG--TGTGCTTG..............................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
.....................................................................................................................................................................................................................................................................................................T---GTGT--GTGTGTGTGTGTG--TGTG..................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
droPer2
CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------A-CAC--ACACACAC----------------------------------------------------------ACACACA----------TGT---GTGC--ACATGTATGTAGA--TTTATTTGTTGAT--------------ATCCTTTAAGCAATTAAGACC-----TATTTGCATA----------TTA-AA-----------------AATTGATTA-AATTTTCAG------------------------------------------------------------------------CC----------------------------------------------------------------AAGCTTCAGAGCATGC----CCAACCGAAAACGAAAGTAAAACCAAAAGA-AAACCCA------------------------------AAATGAAA------GTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................CAC--ACACACAC----------------------------------------------------------ACACACA----------TG...............................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
droWil2
A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------CT-----------A-CAT--ATGT----------------------------------------------------------------ACA--------CA----C---ATGTGTGTGTGTG----TA--TGTAT----------------------GTATATTGCA---------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
A------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------GT-----------A-TAT--GTGC----------------------------------------------------------------GTG--------TGC--GT---GTGT--GTGTGTGTGTGTG--TGTGTGCGTAGTA--------------GTAAAC---G---------CA-----C-TTTGCAAG----------TGG-GTGGCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................TGTGTGCGTAGTA--------------GTAAAC---G---------........................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................TGC----------------------------------------------------------------GTG--------TGC--GT---GTGT--GTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................................24200.204000000000000000000000000000000000000000000000000000000000000004
................................................................................................................................................................................................................GTGC----------------------------------------------------------------GTG--------TGC--GT---GTGT--GTG..................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
droMoj3
AACG------------------------------------------------------------------------------------------------------GA-----C---------------------GTGACC------------------------------------------------C-----------AT---GTGT----------------------------------------------------------------GCATGTGTC----TGCCAAC---CTGT--GTGTGTGTGTGTG--TGTGTGTGTGAGC--------------GTTTATTGCG------------------------GC----------TAA-TTAAAAA----CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA------ATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--GTGTGTGTGTGTGTGTGTCTGTGT--GTGTTGACTTGATATTATGA-----A---------C--------TAGCAAAC----------CGG-CACCCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGG---------------CAA------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:46 AM