ID:

dsi_8738

 Coordinate:

2r:8054005-8054272 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_8054273_8057672_+]; CDS [2r_8054273_8055477_+]; exon [2r_8050679_8054004_+]; CDS [2r_8050679_8054004_+]; intron [2r_8054005_8054272_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTTCCAAAAATCGCGATGCGCTTTTTAGATTTTTTAAAAACATATTCTGCTTTTGATTGTCATTTTGTAGTCCGATTTGTTTGTTGTCCGATTTCTTTCTATTCTAAGGGGATTTCCTTTATAAATTCGCAGGGATTCCATTCACTATTGCATTAATAAACTTTTCACTATTGCATTAATAAACTTTTTCGCTAAACTCCTATTTTGACGTTTAGATTCCTTTTTGTTATAATACTCATAATTAATTTATATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCGCGCAAACAGCAGATA
**************************************************..(((((((((....(((((((((.(((..((......(((...((((((.((.....)).))))))..))).....)).))))))))..))))....)).)))))))............(((.(((((............))))).)))........(((((.((.((((.((.............(((((((........((((((((.......)).)))))).......)))))))..............)))))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
...........................GCTCAACGGGCCAGAGAACACAGA............................................................................................................................................................................................................................................................................................................................. 24 1 1 2.00 2 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ATCGGAAGTTGCCGCGCAAGCAGCAG... 26 1 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AACAAACTTCTTCTCAATCGGA....................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................................................................TCAATCGGAAGTTGCCGCGCAAGCAGC..... 27 1 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AACAAACTTCTTCTCAATCGGAAGT.................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................TTCTTCTCAATCGGAAGTTGCCGCGCA........... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................AAGGCAGCTCAACGGGCC......................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0
..................GAAAAGGCAGCTCAACGG............................................................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................CAACGGGCCAGAGAACACAG.............................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0
......................AGGCAGCTCAACGGGCCAGAG..................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................GTCCGATTTCTGTGTTGTCC.......................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................TTTGTTGTCTGATTTCT................................................................................................................................................................................................................... 17 1 4 0.25 1 0 0 0 1 0 0 0 0
......................................................................................................ATATTCTGCTGTTGATT......................................................................................................................................................................................................................................................... 17 1 5 0.20 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CTACACTCCTGTTTTGA................................................................................................... 17 2 9 0.11 1 0 0 0 0 1 0 0 0
...................................................................................TTTGAGATTTTTTAAAAA........................................................................................................................................................................................................................................................................... 18 1 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................TAATGGATATTGCAGACTTC............................................. 20 3 11 0.09 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................ATGAATTTATATTGCAGCCTT.............................................. 21 3 13 0.08 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GTTTGTTGTCGGATTTGT................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 1 0 0
...........................................................................................................................................CTTTGTTGTCTGATTTCT................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................TAGTATTGCATTAATAAA................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1
............................................................................................................................................TTTGTTGTCTGATTTGTTTTTA.............................................................................................................................................................................................................. 22 3 20 0.05 1 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................................CATTTTCGCTAAACT............................................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................TAGTATTGCATTAATAAA............................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 1
.............................................................................................................................................TTGTTGTCTGATTTCTTTT................................................................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTGGTCGGCCCGGTGGGTCTTTTCCGTCGAGTTGCCCGGTCTCTTGTGTCCATTCTCTACCAAAGGTTTTTAGCGCTACGCGAAAAATCTAAAAAATTTTTGTATAAGACGAAAACTAACAGTAAAACATCAGGCTAAACAAACAACAGGCTAAAGAAAGATAAGATTCCCCTAAAGGAAATATTTAAGCGTCCCTAAGGTAAGTGATAACGTAATTATTTGAAAAGTGATAACGTAATTATTTGAAAAAGCGATTTGAGGATAAAACTGCAAATCTAAGGAAAAACAATATTATGAGTATTAATTAAATATAACGTCTGTAGTTGTTTGAAGAAGAGTTAGCCTTCAACGGCGCGTTTGTCGTCTAT
**************************************************..(((((((((....(((((((((.(((..((......(((...((((((.((.....)).))))))..))).....)).))))))))..))))....)).)))))))............(((.(((((............))))).)))........(((((.((.((((.((.............(((((((........((((((((.......)).)))))).......)))))))..............)))))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
.....................................................................................................................................................................................................................AATTATTTGAAAAGTGAT......................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................GTTTGAAGAAGAGTT............................ 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................GGCGCTACGCGAAAAAGCTT..................................................................................................................................................................................................................................................................................... 20 3 5 0.40 2 0 0 2 0 0 0 0 0 0
...................................................ATTGTCTGCCAAAGGTT............................................................................................................................................................................................................................................................................................................ 17 2 11 0.36 4 0 0 0 0 3 0 0 1 0
..........................................................................................................AGAGAAAAACTCACAGTAAAAC................................................................................................................................................................................................................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0 0 0
....................................................TTCTCTTCCAAAGGTTTGTGG....................................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................CAACAACAGGCTATAGAGAG................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................ATATAACTGCTGTAGTTGTT........................................ 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TAGTTGTTGGAAGAA................................. 15 1 12 0.08 1 1 0 0 0 0 0 0 0 0
...................................................................................................TTGTAGAAGACGATGACTAA......................................................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................................AGGAGTTGGCCTTCAACGC................ 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................TCAAAAGTGATAACATTATT................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1
...........................................................CCAAAGGTTTTTAAC...................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8053955-8054322 + dsi_8738 GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAAAAT----------------------------------------------CGCGATGCGCT--------------------------------TTTTAGATTTTTTAAAAA--CATATTCTGCTT--------------------------------TTGATTGTCATTTTG--TAGTCCGATTT---------GTTTGTTGTCCGATTTCTT-TCTATTCTAAGGGGATTTCC----------------------------------T------------------------------------------T--TATAAATTCGCAGGGA------------------------------------------T-------TCCA---TT--------------------------------------------------------------------------------------------------------CACTATTGCATTAATAAACTTTTCACTATTGCATTAATAAACTTTTTCG-CTAAACTCCTATTTTGACGTTTAGATTCCTT-----TTTGTTATAATACTC----------------------ATAATTAA-----T--TTATATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------
droSec2 scaffold_1:4900358-4900689 + GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAGAAT----------------------------------------------CACGATGCGCT--------------------------------TTTTAGATTATTTAAAAA--CATATTCTGCTT--------------------------------TCGAATGTCATTTTA--TA------------------GTTTGTTTTCCGATTTCTT-TCTATTCTAAGGGGATT-CC----------------------------------T------------------------------------------T--TATAAATTCTTAGGGA------------------------------------------T-------TCCA---TT--------------------------------------------------------------------------------------------------------CACTAC-----------------------TGCATTTATAAACTTTTTCG-CTAAACTCCT---TTGACGTTTGGATTCCGT-----TTTGTTATCA-------------------TACATTAA---ATTAA-----T--TTTTATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------
dm3 chr2R:7347775-7348148 + GACCAGCCGGGCCACGCAAAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAGGAT----------------------------------------------CGCGAT--------------------------------------TTAAGATT-TATGAAAA--CCAATTCGCCTT--------------------------------TCGAATGTCATTTAA--TA------------------GTTTGTTGTCCGAATCCTT-CCTATTTTAAGGTTATTACC----------------------------------T------------------------------------------T--TATAAATCCCTGAGGA------------------------------------------T-------TCTG---TTATCAATTTCAA-TTAGACATTAGCAGTTCAAT------------------------------------------------------------AATA---------A-----------------------CAATTGCGTTTCTAAACTTTTTCGGTTAAATTCCTTTTTTGTCGTTT-GATACTTTATACTTCTGCCATCA-------------------TATATTCAAACATTAA-----T--TTATATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAAATAC-------------AA-------------------------------------------
droEre2 scaffold_4845:18451318-18451575 - GACCAGCCGGGCCACCCAGAAGAGGCAGCTCAACGGACCGGAAAATACAGGTAAGAGGCGGAAT-CGAAAATT----------------------------------------------CGTGATGTACC--------------------------------CTCTAGATT-TTTGAAAA--CTTTCTCGGCTT--------------------------------TCGAATGTCAATTTG--GT------------------ATCTGTTGTCCGGTTTCTT--CTAT-------------------------------------------------T------------------------------------------A--TATATATTCTTAAGGA------------------------------------------T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATCA-------------------TATATTAAATAAGTAA-----T--TTACATTGCAGACATCAACAAACTACTCCTCAATCGTAAGTTGCCG---CGTAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------
droYak3 2R:9614572-9614828 - GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGACCAGAAAACACAGGTAAGATTCGGATT-CAAAGAGT----------------------------------------------CGTGATGTACC--------------------------------TTCTAGATT-TTTAAAAA--CTCTTTCGGCTT--------------------------------TCGAATGTCATTTTG--AT------------------ATCTGTTGTCCGATTTATT-TTTAT-----------------------------------------------------------------------------------------------TATAAATTCTTAAGGA------------------------------------------T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTCA-------------------TATATTAAATAAATAG-----T--TTACATTGCAGACATCAACAAACTCCTCCTTAATCGGAAGTTGCCG---CGTAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATA-----------------------------------------------------------
droEug1 scf7180000409462:1158724-1159055 - GACCAGCAGGGCCACTCAAAAACGGCAGCTCAACGGACCGGAGAATACAGGTAAAAACATTGAT---AAAT--------------------------------------ATTTAACAAATATGATTGAAT--------------------------------TTCTCGAACCTTTCAAAA--TT--T-TGGACTTTA-----------------------------TTGAATGCTATACCA--TAATCTAATCTCAATTCTGATTTTTCTATCTGATTTAAT-GTTA-----------TA---------------------TACTT----------AAG------TAAT----------------TTTT-----------T-----CGAATCTTAAGTA------------------------------------------T-------TTTG---TAAAAGATTACAA-TT------TAACAATTTAAT------------------------------------------------------------ATTAACTATATTAACTACAATAAACG--------------------------------------------------------------------------------------------------------------------------CA--TTCATTACAGACATTAACAAACTCCTGCTCAATCGAAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACATATAC-------------AG-------------------------------------------
droBia1 scf7180000302292:108254-108677 + GACCAGCCGAGCCACCCAGAAAAGGCAACTCAACGGACCGGAGAGTACGGGTAAGATGCCAGTT---AGAT--TTGTAAGATCTTATCTTGTTTTTTGTCACTACAAAAAATTAGAGGA--------------------------------------------------------------------------------------------------------------------------TGTAGTTTAATCTTCA------GT--CCAGTTTGATTCCAT-TTCATTTTTTT----------------------------------------GTTTAA--------AGCT--------------------------------------------------------------CAAGGGCCTTTTAGCTTTTT--------CAAGTATTTGATAATAAAGGATTCGAACTT------TAAGAATTTAGTTAGATAAAAAAATATTTTGTATTGACTTAAGCCTCTTACTCGATGAATTTATTTGAAAAGAGTTATTTTAGTCCCTACAGGAAACGTAAACTACTATCTATTG-----------------------------------TCA------------------TTGCCAACC-------------------TTGATTAAACTATT-------GA--TCCCTTGCAGACTTCAACAAACTCGTGCTCAATCGAAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATGC-------------AG-------------------------------------------
droTak1 scf7180000415991:626982-627071 + TGTTAGTGACACTA---ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAACTTCT----------------------------------------------------------------------------GA--TCCCTTACAGACATCAACAAACTCCTGCTCAATCGAAAGCTGCCT---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATG-----------------------------------------------------------
droEle1 scf7180000491214:2797725-2797938 + GACCCGCCCGGCCACCCAGAAAAGGCAGCTCAACGGACCAGAGAATACAGGTAATTTAATTTTT-TAATACAC----------------------------------------------AATCATTCCCT--------------------------------GTTTTGAATTTATAAAAAAGTCTGATCACCTT--------------------------------TTGTATTT--------------------------------------------TACCATTTTGTC-----------------------------------TGTAAGCACTTTTAA--------ATTT--------------------------------------------------------------TAAAGGCATTTTATATCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGTATTTACTTTCATATTATTG---CACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------ACTTTTG-----------------------------------------------------------
droRho1 scf7180000779263:207123-207510 - TACCAATCGGCCAACCCAGAAGAGGCAGCTCAACGGACCAGAGAATACAGGTAAGTGGAGCAG-----AGGAG----------------------------------------------AGCGT--AGATTTTTCGTTTCTTTTGATTCAAGTTAATGTCCT--------------------------TGGGTTTTA-----------------------------------------------------------------------GTTTTTAATTTTCC-TTTTTTC-----------------------------------TAAAAGCACTTGG------------------------------------------A--TATAAATG--------------------------------TTTCTATCTTATCTATTTT-------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTCG---------------------------------------------------------------------------------TATAATAG---CACAAGCTTCCTTTTGGGTTGTTAAGAATTTAAAATAAACAGATAAAACTGCTGAGGGTTATGAATTCAATGGGAGAGAAGATATTGTTCGCGTATATTAATAGTAAATGAATAGTTAAATGATCTTTTAAATAATATATATACAAATTATATCTATATAATTCATCAATATGACACTAAAA------GCATATAT-------------T--------------------------------------------
droFic1 scf7180000453773:280753-281024 + GACCAGTCGGGCAACCCAAAAACGGCAGCTCAACGGACCGGAGAATACAGGTAAGATATGGAGA-TCAGAAGT----------------------------------------------CATGATTAAAT----------------------T-CATTTTCAGGA-------------------------------------------------------------ATGTATTT--------------------------------------------AAGACTTTTGTA-----------------------------------AGAAATCCCAGTTAC--------ATTGAATTAGGATTTCCTTTCAAACGGGACCCTTAT-----------AGAC----------------------------TATGCTTTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------TTA------------------T-------------------------------TTTAAACATTAATTTATT--TTCCCTTTCAGACATCAACAAACTCCTGCTCAATCGAAAGGTTCTG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTTGCAGC----------------AG-------------------------------------------
droKik1 scf7180000302386:551921-552286 - GACGAGCAGGGCCACCCAGAAGAGACAGCTCAATGGACCGGAGAATACAGGTGAGATTATAGTTGACAAAA--------------------------------------GGTTAATAGTTATTCCTACT---------------------------TTTCCT--------------------------TGGCTTTTACTTGCCACCTTGAAGTGTTTCCACAATTT---------------TGTAATCTAATCTTGA------------------------------------GAGGGTT-TTATTTTGTATTCTATAAAATACTTGGCAGCACTTGAGATTATCCAAC----------------TTTC-----------A-----AGGGTTTCAAGTAAATAGATAATAGTTGCAAGGCCAATATACACCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---------------------------TCTGGCATAAAGTTTATAAAAAATTATATTAAATTGT---ATCTA-----T---TTCCATTTAGACATCAACAAACTCCTGCTGAATCGCAAGTTCTTG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACTGCAGC-------------AA-------------------------------------------
droAna3 scaffold_13266:1058913-1058967 + GACCAACCGAGCCACCCAGAAGCGGCAGGTCAATGGACCGGAGAATACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396730:2056017-2056079 + GACCAGCAGAGCCACCCAGAAGAGGCAGGTCAATGGGCCGGAGAATACAGGTGAGTTTCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:4529561-4529615 + GACTAGCCGTGGCACCCAGAAGCGACAGCTCAACGGGCCCGAGAACACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_2:4718454-4718508 + GACTAGCCGTGGCACCCAGAAGCGACAGCTCAACGGGCCCGAGAACACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004558:2090692-2090778 - TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-----C--TTTCTTTGCAGACATCAACAAATTGTTGCTTAATCGCAAATTCTCTCAGCGCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------GGTTACCCAAGCCACCGGAGGA--------------------------------------------
droVir3 scaffold_12875:13136307-13136408 - GACGAGCCGCACCACACAAAAGCGGCAGCTAAACGGACCCGAAAACACAGGTGAGTCGTCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAATTGAAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-------------------AGTTCGATTATTTTAAACCCTTT----------------------
droMoj3 scaffold_6496:20416256-20416358 - TCTGTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-ACTGT-----------------------------------------------------------------------------------------------AATAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGGGTTTGTATCTTGCAGATATTAACAAACTGCTGCTGAACCGGAAGTTCTCGCAGCGTAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGCAGCAGCAA-----------------------------------------------------------
droGri2 scaffold_15245:7221673-7221795 + GACGAGTCGTGCGACGCAGAAGCGACAGCTAAACGGACCCGAAAACACAGGTAAATCATCAACT-TCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---TGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------------------AATGCAAACATTTTAAACACTTGTTTTTGGTGTTTGTAGCTTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAAAAT----------------------------------------------CGCGATGCGCT--------------------------------TTTTAGATTTTTTAAAAA--CATATTCTGCTT--------------------------------TTGATTGTCATTTTG--TAGTCCGATTT---------GTTTGTTGTCCGATTTCTT-TCTATTCTAAGGGGATTTCC----------------------------------T------------------------------------------T--TATAAATTCGCAGGGA------------------------------------------T-------TCCA---TT--------------------------------------------------------------------------------------------------------CACTATTGCATTAATAAACTTTTCACTATTGCATTAATAAACTTTTTCG-CTAAACTCCTATTTTGACGTTTAGATTCCTT-----TTTGTTATAATACTC----------------------ATAATTAA-----T--TTATATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................GCTCAACGGGCCAGAGAACACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTTCTTCTCAATCGGA.........................................................................................................................................................................................................................................................................2211.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTTCTTCTCAATCGGAAGT......................................................................................................................................................................................................................................................................2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTCAATCGGAAGTTGCCG---CGCA..........................................................................................................................................................................................................................................................2711.00100000010000000000
.....................AAGGCAGCTCAACGGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................GAAAAGGCAGCTCAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..............................CAACGGGCCAGAGAACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
......................AGGCAGCTCAACGGGCCAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
droSec2
GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAGAAT----------------------------------------------CACGATGCGCT--------------------------------TTTTAGATTATTTAAAAA--CATATTCTGCTT--------------------------------TCGAATGTCATTTTA--TA------------------GTTTGTTTTCCGATTTCTT-TCTATTCTAAGGGGATT-CC----------------------------------T------------------------------------------T--TATAAATTCTTAGGGA------------------------------------------T-------TCCA---TT--------------------------------------------------------------------------------------------------------CACTAC-----------------------TGCATTTATAAACTTTTTCG-CTAAACTCCT---TTGACGTTTGGATTCCGT-----TTTGTTATCA-------------------TACATTAA---ATTAA-----T--TTTTATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................ACGGGCCAGAGAACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
GACCAGCCGGGCCACGCAAAAAAGGCAGCTCAACGGGCCAGAGAACACAGGTAAGAGATGGTTT-CCAAGGAT----------------------------------------------CGCGAT--------------------------------------TTAAGATT-TATGAAAA--CCAATTCGCCTT--------------------------------TCGAATGTCATTTAA--TA------------------GTTTGTTGTCCGAATCCTT-CCTATTTTAAGGTTATTACC----------------------------------T------------------------------------------T--TATAAATCCCTGAGGA------------------------------------------T-------TCTG---TTATCAATTTCAA-TTAGACATTAGCAGTTCAAT------------------------------------------------------------AATA---------A-----------------------CAATTGCGTTTCTAAACTTTTTCGGTTAAATTCCTTTTTTGTCGTTT-GATACTTTATACTTCTGCCATCA-------------------TATATTCAAACATTAA-----T--TTATATTGCAGACATCAACAAACTTCTTCTCAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAAATAC-------------AA-------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...............................AACGGGCCAGAGAACACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAATCGGAAGTTGCCG---CGC...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCAGCTCAACGGGCCAGAGAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGAGATGGTTT-CCAAGGAT----------------------------------------------CGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................TCAACGGGCCAGAGAACACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................GCTCAACGGGCCAGAGAACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACTTCTTCTCAATCGGAAGT......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------..................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAACGGGCCAGAGAACACAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GGCAGCTCAACGGGCCAGAGAACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................AACGGGCCAGAGAACACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GAT--------------------------------------TTAAGATT-TATGAAAA--CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................AAAGGCAGCTCAACGGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAATC............................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGGCAGCTCAACGGGCCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................AAAGGCAGCTCAACGGGCCAGAGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................CAACGGGCCAGAGAACACAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACAAACTTCTTCTCAATCGGAA........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAAACTTCTTCTCA...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAACTTCTTCTCAATCGGAAGT......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........CCACGCAAAAAAGGCAGCTCAACGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCAATCGGAAGTTGCCG---CGCA..........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTTCTTCTCAATCG...........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................GCAGCTCAACGGGCCAGAGAACACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGGTTT-CCAAGGAT----------------------------------------------CGCGAT--------------------------------------TT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................AAAGGCAGCTCAACGGGCCAGAGAACACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGCTCAACGGGCCAGAGAACACAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
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........................GCAGCTCAACGGGCCAGAGAACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAAAT............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAAGGCAGCTCAACGGGCCAGAGAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCAACGGGCCAGAGAACACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCACGCAAAAAAGGCAGCTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.ACCAGCCGGGCCACGCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
GACCAGCCGGGCCACCCAGAAGAGGCAGCTCAACGGACCGGAAAATACAGGTAAGAGGCGGAAT-CGAAAATT----------------------------------------------CGTGATGTACC--------------------------------CTCTAGATT-TTTGAAAA--CTTTCTCGGCTT--------------------------------TCGAATGTCAATTTG--GT------------------ATCTGTTGTCCGGTTTCTT--CTAT-------------------------------------------------T------------------------------------------A--TATATATTCTTAAGGA------------------------------------------T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTATCA-------------------TATATTAAATAAGTAA-----T--TTACATTGCAGACATCAACAAACTACTCCTCAATCGTAAGTTGCCG---CGTAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GCAGATA-----------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................AAGAGGCAGCTCAACGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCAATCGTAAGTTGCC..................................................................................................................................................................................................................................................................1911.0011000000
droYak3
GACCAGCCGGGCCACCCAGAAAAGGCAGCTCAACGGACCAGAAAACACAGGTAAGATTCGGATT-CAAAGAGT----------------------------------------------CGTGATGTACC--------------------------------TTCTAGATT-TTTAAAAA--CTCTTTCGGCTT--------------------------------TCGAATGTCATTTTG--AT------------------ATCTGTTGTCCGATTTATT-TTTAT-----------------------------------------------------------------------------------------------TATAAATTCTTAAGGA------------------------------------------T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTCA-------------------TATATTAAATAAATAG-----T--TTACATTGCAGACATCAACAAACTCCTCCTTAATCGGAAGTTGCCG---CGTAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATA-----------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAAACTCCTCCTTAATCGGAAGT......................................................................................................................................................................................................................................................................2811.00100000010000
............................CTCAACGGACCAGAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAACTCCTCCTTAATCGGAAGT......................................................................................................................................................................................................................................................................2611.00100000010000
.......................GGCAGCTCAACGGACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
GACCAGCAGGGCCACTCAAAAACGGCAGCTCAACGGACCGGAGAATACAGGTAAAAACATTGAT---AAAT--------------------------------------ATTTAACAAATATGATTGAAT--------------------------------TTCTCGAACCTTTCAAAA--TT--T-TGGACTTTA-----------------------------TTGAATGCTATACCA--TAATCTAATCTCAATTCTGATTTTTCTATCTGATTTAAT-GTTA-----------TA---------------------TACTT----------AAG------TAAT----------------TTTT-----------T-----CGAATCTTAAGTA------------------------------------------T-------TTTG---TAAAAGATTACAA-TT------TAACAATTTAAT------------------------------------------------------------ATTAACTATATTAACTACAATAAACG--------------------------------------------------------------------------------------------------------------------------CA--TTCATTACAGACATTAACAAACTCCTGCTCAATCGAAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACATATAC-------------AG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GACCAGCCGAGCCACCCAGAAAAGGCAACTCAACGGACCGGAGAGTACGGGTAAGATGCCAGTT---AGAT--TTGTAAGATCTTATCTTGTTTTTTGTCACTACAAAAAATTAGAGGA--------------------------------------------------------------------------------------------------------------------------TGTAGTTTAATCTTCA------GT--CCAGTTTGATTCCAT-TTCATTTTTTT----------------------------------------GTTTAA--------AGCT--------------------------------------------------------------CAAGGGCCTTTTAGCTTTTT--------CAAGTATTTGATAATAAAGGATTCGAACTT------TAAGAATTTAGTTAGATAAAAAAATATTTTGTATTGACTTAAGCCTCTTACTCGATGAATTTATTTGAAAAGAGTTATTTTAGTCCCTACAGGAAACGTAAACTACTATCTATTG-----------------------------------TCA------------------TTGCCAACC-------------------TTGATTAAACTATT-------GA--TCCCTTGCAGACTTCAACAAACTCGTGCTCAATCGAAAGTTGCCG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATGC-------------AG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGTTAGTGACACTA---ATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAACTTCT----------------------------------------------------------------------------GA--TCCCTTACAGACATCAACAAACTCCTGCTCAATCGAAAGCTGCCT---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACAGATG-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GACCCGCCCGGCCACCCAGAAAAGGCAGCTCAACGGACCAGAGAATACAGGTAATTTAATTTTT-TAATACAC----------------------------------------------AATCATTCCCT--------------------------------GTTTTGAATTTATAAAAAAGTCTGATCACCTT--------------------------------TTGTATTT--------------------------------------------TACCATTTTGTC-----------------------------------TGTAAGCACTTTTAA--------ATTT--------------------------------------------------------------TAAAGGCATTTTATATCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCGTATTTACTTTCATATTATTG---CACAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------ACTTTTG-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TACCAATCGGCCAACCCAGAAGAGGCAGCTCAACGGACCAGAGAATACAGGTAAGTGGAGCAG-----AGGAG----------------------------------------------AGCGT--AGATTTTTCGTTTCTTTTGATTCAAGTTAATGTCCT--------------------------TGGGTTTTA-----------------------------------------------------------------------GTTTTTAATTTTCC-TTTTTTC-----------------------------------TAAAAGCACTTGG------------------------------------------A--TATAAATG--------------------------------TTTCTATCTTATCTATTTT-------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTCG---------------------------------------------------------------------------------TATAATAG---CACAAGCTTCCTTTTGGGTTGTTAAGAATTTAAAATAAACAGATAAAACTGCTGAGGGTTATGAATTCAATGGGAGAGAAGATATTGTTCGCGTATATTAATAGTAAATGAATAGTTAAATGATCTTTTAAATAATATATATACAAATTATATCTATATAATTCATCAATATGACACTAAAA------GCATATAT-------------T--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GACCAGTCGGGCAACCCAAAAACGGCAGCTCAACGGACCGGAGAATACAGGTAAGATATGGAGA-TCAGAAGT----------------------------------------------CATGATTAAAT----------------------T-CATTTTCAGGA-------------------------------------------------------------ATGTATTT--------------------------------------------AAGACTTTTGTA-----------------------------------AGAAATCCCAGTTAC--------ATTGAATTAGGATTTCCTTTCAAACGGGACCCTTAT-----------AGAC----------------------------TATGCTTTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------TTA------------------T-------------------------------TTTAAACATTAATTTATT--TTCCCTTTCAGACATCAACAAACTCCTGCTCAATCGAAAGGTTCTG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTTGCAGC----------------AG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GACGAGCAGGGCCACCCAGAAGAGACAGCTCAATGGACCGGAGAATACAGGTGAGATTATAGTTGACAAAA--------------------------------------GGTTAATAGTTATTCCTACT---------------------------TTTCCT--------------------------TGGCTTTTACTTGCCACCTTGAAGTGTTTCCACAATTT---------------TGTAATCTAATCTTGA------------------------------------GAGGGTT-TTATTTTGTATTCTATAAAATACTTGGCAGCACTTGAGATTATCCAAC----------------TTTC-----------A-----AGGGTTTCAAGTAAATAGATAATAGTTGCAAGGCCAATATACACCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT---------------------------TCTGGCATAAAGTTTATAAAAAATTATATTAAATTGT---ATCTA-----T---TTCCATTTAGACATCAACAAACTCCTGCTGAATCGCAAGTTCTTG---CGCAAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------ACTGCAGC-------------AA-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GACCAACCGAGCCACCCAGAAGCGGCAGGTCAATGGACCGGAGAATACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............CACCCAGAAGCGGCAGGTCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
GACCAGCAGAGCCACCCAGAAGAGGCAGGTCAATGGGCCGGAGAATACAGGTGAGTTTCCAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GACTAGCCGTGGCACCCAGAAGCGACAGCTCAACGGGCCCGAGAACACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........GGCACCCAGAAGCGACAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
droPer2
GACTAGCCGTGGCACCCAGAAGCGACAGCTCAACGGGCCCGAGAACACAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA-----C--TTTCTTTGCAGACATCAACAAATTGTTGCTTAATCGCAAATTCTCTCAGCGCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------GGTTACCCAAGCCACCGGAGGA--------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GACGAGCCGCACCACACAAAAGCGGCAGCTAAACGGACCCGAAAACACAGGTGAGTCGTCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAATTGAAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-------------------AGTTCGATTATTTTAAACCCTTT----------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................GCGGCAGCTAAACGGACCCGAAAACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
..................................................GTGAGTCGTCAGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAT.............................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.............................TAAACGGACCCGAAAACACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000010000000
........GCACCACACAAAAGCGGCAGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
TCTGTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-ACTGT-----------------------------------------------------------------------------------------------AATAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGGGTTTGTATCTTGCAGATATTAACAAACTGCTGCTGAACCGGAAGTTCTCGCAGCGTAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGCAGCAGCAA-----------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGGTTTGTATCTTG.......................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCAGCGTAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGCAGCA...............................................................2411.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAACAAACTGCTGCTGAACC............................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCAGCGTAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGCAG.................................................................2211.001100000
droGri2
GACGAGTCGTGCGACGCAGAAGCGACAGCTAAACGGACCCGAAAACACAGGTAAATCATCAACT-TCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---TGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------------------AATGCAAACATTTTAAACACTTGTTTTTGGTGTTTGTAGCTTTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:12 AM