dsi_8737

CDS [2l_20279579_20279697_+]; exon [2l_20279579_20279806_+]; intron [2l_20279268_20279578_+]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TCACTTTAGTGGTTGACAATGTCTAAAAGTATTTTGAAAAGATTTCATTGAGGTTTCTTGAAGGTTACTAATAAATAGGGTAACGTTTTATTGTTTCTATGTTTTATCTAATTTCTGAGTCCTTTTTGACCTTTATAATTCCTTTCTTTTGTTGATTTATTAATCGTATCTTGAACTAACCACTTGATGTGTTCTTTCAGTCATCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG ************************************************(((.....(((((((((((...((((.(((((((((............))))..))))).))))...))).......)))))))).....))).........(((((....)))))....(((((..(((.((.....)))))..)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	SRR553487 NRT_0-2 hours eggs	M053 female body	GSM343915 embryo	O001 Testis	SRR553488 RT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries
.......................................................................................................................................................................................................................TTGGATCCGCCACGAAGC.................	18	0	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................TTATTAATCGTATCTTGAACT.........................................................................	21	0	1	2.00	2	2	0	0	0	0	0	0
...................................................................................................................................................................................................................................CGAAGCGCACCCGTGCCGAC...	20	0	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................AATTTCTGCGTCCCTTTTGAC........................................................................................................................	21	2	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................CGTATCTTGAACTAACCACTT.................................................................	21	0	1	1.00	1	0	0	1	0	0	0	0
......................................................................................................................................................................................................................ATTGGATCCGCCACGAAGC.................	19	0	1	1.00	1	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................CGCCACGAAGCGCACCCGTGCC......	22	0	1	1.00	1	0	0	0	1	0	0	0
............................................................................................................................................................................................................................TCCGCCACGAAGCGCACCC...........	19	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................TTTCTGAGTCGTTTTTGACCT......................................................................................................................	21	1	1	1.00	1	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................TATTGGATCCGCCACGAAGC.................	20	0	1	1.00	1	0	0	0	1	0	0	0
........................AAAAGCATTTTGAAAAGA................................................................................................................................................................................................................	18	1	3	0.33	1	0	1	0	0	0	0	0
.......................................................................................TAATTGTTTCAATGTTTTATCAA............................................................................................................................................	23	3	5	0.20	1	0	0	0	0	0	1	0
.........................AAAGTACTTTGAAAAG.................................................................................................................................................................................................................	16	1	14	0.07	1	0	0	0	0	0	1	0
........................AAAAGCACTTTGAAAAGA................................................................................................................................................................................................................	18	2	20	0.05	1	0	0	0	0	0	0	1

AGTGAAATCACCAACTGTTACAGATTTTCATAAAACTTTTCTAAAGTAACTCCAAAGAACTTCCAATGATTATTTATCCCATTGCAAAATAACAAAGATACAAAATAGATTAAAGACTCAGGAAAAACTGGAAATATTAAGGAAAGAAAACAACTAAATAATTAGCATAGAACTTGATTGGTGAACTACACAAGAAAGTCAGTAGGACGGGGTATAACCTAGGCGGTGCTTCGCGTGGGCACGGCTGTAC ************************************************(((.....(((((((((((...((((.(((((((((............))))..))))).))))...))).......)))))))).....))).........(((((....)))))....(((((..(((.((.....)))))..)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	M024 male body	M053 female body	SRR902009 testis	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs
.................................................................................TTGCAAAATAACAAAGATCTAAC..................................................................................................................................................	23	3	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................CGGGGTATAACCTAGGCGGT.......................	20	0	1	1.00	1	0	1	0	0	0	0
................................................................................ATTGCAAAATAACAAAGATCTAAT..................................................................................................................................................	24	3	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................TAACCTACGCGGTGCTTC..................	18	1	1	1.00	1	0	0	1	0	0	0
.................................................................................TTGCAAAATAACAAAGATCTAAT..................................................................................................................................................	23	3	3	0.67	2	2	0	0	0	0	0
........................................................................................................................................................................................................................ACCTAGGGGCTGCTGCGCGTG.............	21	3	4	0.25	1	0	0	0	1	0	0
..................................................................................................................................................AAAACAACTAAATAA.........................................................................................	15	0	18	0.06	1	0	0	0	0	1	0
.................................................................................................................AGACTCAGGACAAGCT.........................................................................................................................	16	2	20	0.05	1	0	0	0	0	0	1
...............................................................................................................................................................................................AAGAAAGTCAGTAGA............................................	15	1	20	0.05	1	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droSim2	2l:20279379-20279628 +	dsi_8737	TCACTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGAAAAGAT-------TTCATTGAGGTTTCTTGAAGGTTAC------------------------------------------------------------TAA-TAA-----ATAGGGT------------AACGT--TT----------------------------TATT--GTTTCTATGTTTT---------------------------------------------ATCTAATTTCT-GA--GTCCTTTTTGACCTTTATAATTCCTTTCTT----TTGTTGATTTATTA-------------------------ATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTCAGTCATCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG
droSec2	scaffold_18:737820-738069 +		TCACTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGAAAAGAT-------TTCATTGAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-TAA-----ATAGGGT------------AACGT--TT----------------------------TATT--GTTTCTATGTTTT---------------------------------------------ATCTAATTTCT-GC--GTCCCTTTTGACCTTTATAATTCCCTTCTT----TTGTTGATTTAATA-------------------------ATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTCAGTCGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG
dm3	chr2L:20827269-20827546 +		TCTCTTCAGT-GGTTGACAATGA-----CTAAAAGTATTT-TGAAA---TTAATGGAATCTTTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-TAA-----ATAGGGT------------AACGT--T-----------------------------TATT--CTTTCCATGTTTT---------------------------------------------ATCTAATTTCT-GC--GTCCTTGTTGACCTCTATAATTCCCTTCTT----TTGTTGATTTATTAAAACATTGTTATCTTGGTTTGTGTAATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTTAGTTGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG
droEre2	scaffold_4845:3643453-3643718 -		TCTCTTTAGT-GGTTGACAATGT-----CTAAAGGTTTTT-TGGAGAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-CAA-----ATAGGGT------------AACGT--TT----------------------------T-TT--GTTT---AGTTTT---------------------------------------------ATCATATT-CC-GC--GTCCCTGTCGACCTTTAA-GTGCCCCTTTT----TT----ATTTATTGAAAGAATGTTATCTT------CGTAATCGTA------TCTTGC-ACTAACCAC-----------------TCGATGTTTTC----CCGTAACTTTCAGTCGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGATATG
droYak3	2R:9734608-9734890 -		TCTCTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGGAAAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------TAA-AAA-----ATAAGGT------------GACGT--TT----------------------------CTTTTTGT---TTAGTTTT---------------------------------------------ATCATATTTCT-GC--GTTCTTGTCGACCTTTAGTGTCCCCTTTTATT-TTTGTTGATTTATAAAT-GATTGTTATCTTGGTGTGGGTAATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTTTTT----CCGTAACTTTCAGTCGTCCTGCCCCACATTGGATCAGCCACCAAGCGCACCCGTGCCGACATG
droEug1	scf7180000409767:474320-474604 -		TCTCTTTAGT-AGTTGACAATGT-----CTAAAAGTATTT-CGGAGAGATTT-----TTTATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-AAATA---ATAGGTT------------AAAGT--T-----------------------------ATTT--CTTTTT--G-TTT---------------------------------------------ATCATATTTTTGGC--GTCCTCGTCGACCTTTAGTGTTCCCTTTTTTTGTTTGCTGATTTATTAA-TC-TGGTTATCTTGACTTGCATTATCGTA------CCACCA-ACTAACCAC-----------------TTGATGTTTTC----CCCTGACTTTCAGTTATCCTGCCCCATATTGGATCCGCCACGAAGCGTACCCGTGCCGATATG
droBia1	scf7180000302422:7263444-7263707 -		TCTGTGTAGT-GGTTGAAACTGT-----CTAAAAGTATTT-CGGTGAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-GAAGA---ATAGGTT------------ATGGT--T----------------------------------------------TT---------------------------------------------ATCATATTT-T-AC--GTCCTCGT-ACCCTTTCATGTTCGTCT-TT----TTGGTGACTTGTTAGAAC-TGGTTATCTTCCTACGCTTTATCGTA------TCTCAA-ACTAACCGC-----------------TTGCTGTGTTC----TGCCAACTTTCAGTTGTCCTGCCCCACATTGGCTCCGCCACGAAGCGCACCCGTGCCGATATG
droTak1	scf7180000415708:652610-652889 -		TCTGCTTAGT-AGTTGACAATGT-----CTAAAAGTATTT-CGGAGAGAT-------TTTGTTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-ATATA---AGAGGTT------------GAAGT--TT----------------------------TTTT--CTTTCTATATTTT---------------------------------------------ATC---------AC--GTCCTCTTCGACCTTTAATGTTCCCTT-TT----TTGGTGATTTATTAAAAC-TGGTTATCTAGCTTTGCTATATCTTACTTCAAACTCAA-ACTGACCAC-----------------TTGATGTTTTC----CTCTAACTTTCAGTTGTCCTGCCCCACATTGGATCCGCCACGAGGCGCACCCGTGCCGATATG
droEle1	scf7180000491186:844396-844667 +		TCAGTTGAGTTAGTTGACAATGT-----CTTAAAGTATTG-CGAAGAGAT-------TTTAGTAAGGTTTCTTGAAGGTTAT------------------------------------------------------------CAA-AAATT---GTAGGTT------------ACAGT---T----------------------------TA-T--GTTTCTTTATTTT---------------------------------------------GTCA-ATTT-T-TC--GTCTTC--TAAC-TTTGAAGTTCGTATTTT----TCTGTGATTTATTATTCG--AG---TCTTTCCTAGCAT-----TA------TCTTTA-ACTTATCAT-----------------TTGCTGTTTTTTTTTTTACAACTTTCAGTTATTCTACCTCATATTGGATCCGCCACAAATCGCACCCGTGCCGATATG
droRho1	scf7180000779706:16657-16937 +		TCTGCTTGGT-AGTTGACAATGT-----CTAAAAGTATTT-CAAAAAGAT-------TTAAGTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-CAATT---GCAGGTT------------TAAGT--TT----------------------------T-----GTTTCTTCTTTTT---------------------------------------------ATCATATTTTC-GC--GTCTTTCTTGACCTCTGATGTCCCTTTATT----TTGGTGATTTATTAAAAC-TGGTTATCTGGCTTGGCTTTATCGTC------ACTCAA-ACTAATCAC-----------------TTGATGTTTTT---TTCCCAACTTTTAGTTATCCTGCCCCATATTGGATCTGCCACAAAGCGCACCCGTGCCGATATG
droFic1	scf7180000453842:330470-330730 +		TCTGCTTAGT-AGTTGACAATGT-----CTAAAGAT-------------T-------TTTATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-AAA------TAGGCT-------------------------------------------------CCTT--CTTTTTGTATTTT---------------------------------------------ATCATATTTTT-TG--GACCTCCATGACCTTAAATGTTCCATTTTG----TTGATGATTTAATACAAC-TGCTTATCTGGCTTGGACTTATCTTG------ACTCAA-ACTAATCAG-----------------CTGCTGCTTTC----CCCTAACTTTCAGTTGTCCTGCCCCACATTGGATCCGCCACGAAGCGCACCCGTGCCGATATG
droKik1	scf7180000302412:391259-391490 -		TCTGCTTAGTGGGTTGACATTGT-----CTAAAAGTATTTTCGGTGAGAT-------TTAACTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------AAA-CCATT-----CTTG------------------------------------------------------------CCATGT----------------------CTTTTAAAGGTTAAACTTAAAGTTTTATCTT--------------------CACC----------------------------------------------------TACAAATTAAGTTT------TGTTAA-ATTCACCACT--AACC----------TTGATTTATCT---ATGATCTCTTTCAGTTGTCCTGCCCCACATTGGCTCTGCCACGAAGCGAACTCGCGCCGAAATG
droAna3	scaffold_12943:3895800-3896005 -		TCTACTTGGT-AGTTGACATAGT-----CTGGAAGTATTT-TG-AGAGAT-------TTTATTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------ATATAAA-A---AAAAGGC------------AAAAC--CC----------------------------CATT--AA----AAGGTTT---------------------------------------------AT----TTTAA-GT--GACCACCTTGACCTTAAA--------------------------------------------------------------------------------C---------------ATAATTGATTT--TG----TGTTCCCTTTCAGTTATCCTGCCCCACATTGGATCTGCCACGAAGCGAACCCGCGCCGACATG
droBip1	scf7180000395973:115473-115664 -		TCTGCCTGGT-AGTTGACATGGT-----CTGGGAGTATTT-TG-AGAGAT-------TTTATTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------AAT-AAA-A---AAAGACC------------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCG--------AGTAAA-AGTGACCACTTTAACCTTTAGCTTAATTGAGT--TTC----TGTTCACTTTCAGTTATCCTGCCCCACATTGGATCTGCCACCAAGCGAACCCGCGCCGACATG
dp5	4_group3:7456515-7456596 -		C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTAC-----------------TCCACATCTCC----CTCTTTCTAACAGTTGTCCTGCCCCACATAGGCTCTGCCACGAAGCGAACCCGTGCCGAGATG
droPer2	scaffold_1:8906132-8906213 -		-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACCAC-----------------TCGACATCTCC----CTCTTTCTAACAGTTGTCCTGCCCCACATAGGCTCTGCCACGAAGCGAACCCGTGCCGAGATG
droWil2	scf2_1100000004521:8818291-8818570 +		CGAC-TTGGT-GGTA----ATGATTGAACCAAAAA--------AAAAAGT-------TGTGTTAAGGTTTCGTGAAGGTTAT------------------------------------------------------------GGA-GGAAATTTTTAGGCT------------GTGAACAT-----------------------------ATCA--CTCAAT--G-TTTGTCAAGATATTTACAATGTCTCTCTTTAAT---TTTTTAAGTTCTATCTTATCACT-TTGTCTTATTTTCGACCTCT------CGC-------------------------------TTATCTAGACA------ATTTTT------GTGTAA-TCTAAACAC-----------------TTGACTT---G----GCTTCAATTTCAGTTGTCCTCCCCCACATTGGCTCGGCGACGAAACGTACCCGTGCCGAAATG
droVir3	scaffold_12963:10826666-10826721 -		T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTTATTCTACCCCACATTGGCTCCGCCACCACGCGCACCCGCTCCGACATG
droMoj3	scaffold_6500:19533221-19533466 -		ATTGCAGCGA-------------------------------------------------------GGTTCCACTGTGATTCATAGCAAATCGAGTCGTTTTTGAGCTTTTGTTACCGCATACCTTGTTTGACTTCTAGTTCCAGA-AAA-A---AAAGAACTCGCTGCTGGCCTCAGT--TGGGTTTCTTCTGTATAGTAGATTTAAGTACA-T--GTCTCTTT-------------------------------------------------------------------------------------------------------------------------------------------A-TGCA------ACTCAAGGTCAACCGC-----------------TTCAC------------TTCTATTTCAGTTATTCTGCCCCACATTGGATCTGCCACCAATCGCACCCGCTCCGACATG
droGri2	scaffold_15252:5000643-5000698 -		T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTCATTATGCCGCACATTGGATCGGCCACAAATCGCACCCGTTCCGAGATG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TCACTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGAAAAGAT-------TTCATTGAGGTTTCTTGAAGGTTAC------------------------------------------------------------TAA-TAA-----ATAGGGT------------AACGT--TT----------------------------TATT--GTTTCTATGTTTT---------------------------------------------ATCTAATTTCT-GA--GTCCTTTTTGACCTTTATAATTCCTTTCTT----TTGTTGATTTATTA-------------------------ATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTCAGTCATCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCCGCCACGAAGC.................	18	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTATTA-------------------------ATCGTA------TCTTGA-ACT.....................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCGCACCCGTGCCGAC...	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................CGTA------TCTTGA-ACTAACCAC-----------------TT............................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGC.................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACGAAGCGCACCCGTGCC......	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCACGAAGCGCACCC...........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGC.................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

droSec2

TCACTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGAAAAGAT-------TTCATTGAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-TAA-----ATAGGGT------------AACGT--TT----------------------------TATT--GTTTCTATGTTTT---------------------------------------------ATCTAATTTCT-GC--GTCCCTTTTGACCTTTATAATTCCCTTCTT----TTGTTGATTTAATA-------------------------ATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTCAGTCGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCCGCCACGAAGC.................	21	1	7.00	7	0	3	4	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGC.................	19	1	5.00	5	1	1	3	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGC.................	20	1	2.00	2	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCACGAAGCGCACCCGTGC.......	24	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCCGCCACGAAGCGCA..............	19	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................C-----------------TTGATGTGTT-----------CTTTCAG..................................................	18	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCCGCCACGAA...................	19	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGGATCCGCCACGAA...................	20	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCATATTGGATCCGCCACGA....................	25	1	1.00	1	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCATATTGGATCCGCC........................	21	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCCGCCACGAAG..................	20	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGCGCACCCGTGCCGA....	20	1	1.00	1	0	0	1	0
...........................................AAAAGAT-------TTCATTGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCCGCCACGAAGCGCACCC...........	23	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................TTTCT-GC--GTCCCTTTTGACCTT.....................................................................................................................................................................................	22	1	1.00	1	1	0	0	0
.......................................................................TTGAAGGTTAC------------------------------------------------------------CAA-TAA-----ATAGGTC------------.........................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCATATTGGATCCGCC........................	19	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCCGCCACGA....................	18	1	1.00	1	0	0	1	0

dm3

TCTCTTCAGT-GGTTGACAATGA-----CTAAAAGTATTT-TGAAA---TTAATGGAATCTTTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-TAA-----ATAGGGT------------AACGT--T-----------------------------TATT--CTTTCCATGTTTT---------------------------------------------ATCTAATTTCT-GC--GTCCTTGTTGACCTCTATAATTCCCTTCTT----TTGTTGATTTATTAAAACATTGTTATCTTGGTTTGTGTAATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTGTT-----------CTTTTAGTTGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGACATG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGCGCACC............	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTGCCCCATATTGGATCCGCCA.......................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................ATCTTTAAGGTTTCTTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAAGCGCACCCGTGCCGACAT.	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGCGC...............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TAAAACATTGTTATCTTGGT..................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCATATTGGATCCGC.........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACGAAGCGCACCCGTGCC......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCACGAAGCGCACC............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAAGCGCACCCGTGCCGACATG	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................TTGAAGGTTAC------------------------------------------------------------AAA-TAA-----ATA.........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGCACCCGTGCCGAC...	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTGCCCCATATTGGATCC...........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGCGCACCC...........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TCTCTTTAGT-GGTTGACAATGT-----CTAAAGGTTTTT-TGGAGAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-CAA-----ATAGGGT------------AACGT--TT----------------------------T-TT--GTTT---AGTTTT---------------------------------------------ATCATATT-CC-GC--GTCCCTGTCGACCTTTAA-GTGCCCCTTTT----TT----ATTTATTGAAAGAATGTTATCTT------CGTAATCGTA------TCTTGC-ACTAACCAC-----------------TCGATGTTTTC----CCGTAACTTTCAGTCGTCCTGCCCCATATTGGATCCGCCACGAAGCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGC.................	19	1	10.00	10	0	3	0	1	4	2	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCCGCCACGAAGC.................	21	1	3.00	3	0	2	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACGAAGCGCACCCGTGC.......	21	1	2.00	2	0	0	0	1	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCGCACCCGTGCCG.....	18	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGCGC...............	21	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTGCCCCATATTGGATCCGCCACG.....................	28	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGCGC...............	22	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCATATTGGATCCGCCAC......................	20	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTGCCCCATATTGGATCCGCC........................	25	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGCGCACCCGTGC.......	29	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCGCCACGAAGCGCACCCGTGCC......	26	1	1.00	1	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCACGAAGCGCACCCGTGC.......	22	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCATATTGGATCC...........................	19	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCCGCCACGAAGCG................	20	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGCGCACC............	25	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGATCCGCCACGAAGC.................	20	1	1.00	1	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTGCCCCATATTGG...............................	20	1	1.00	1	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................T------CGTAATCGTA------TCTTGC-ACTA....................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTGCCCCATATTGGAT.............................	22	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCACGAAGCGCACCCGTGCC......	25	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCACGAAGCGCACCCGTGC.......	24	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGCGCACCCGTGCCGATAT.	23	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCATATTGGATCCGCCACGA....................	23	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCCGCCACGAAGCGCACCCGTGCC......	27	1	1.00	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCGCCACGAAGCGCACCCGTGCCGAT...	29	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCATATTGGATCCGCCACGAA...................	27	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCGCCACGAAGCGCACCCG..........	22	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTGCCCCATATTGGATCCGCC........................	27	1	1.00	1	0	0	0	0	0	1	0

droYak3

TCTCTTTAGT-GGTTGACAATGT-----CTAAAAGTATTT-TGGAAAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------TAA-AAA-----ATAAGGT------------GACGT--TT----------------------------CTTTTTGT---TTAGTTTT---------------------------------------------ATCATATTTCT-GC--GTTCTTGTCGACCTTTAGTGTCCCCTTTTATT-TTTGTTGATTTATAAAT-GATTGTTATCTTGGTGTGGGTAATCGTA------TCTTGA-ACTAACCAC-----------------TTGATGTTTTT----CCGTAACTTTCAGTCGTCCTGCCCCACATTGGATCAGCCACCAAGCGCACCCGTGCCGACATG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCCACCAAGCGCACCCGTGCCGA....	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCAGCCACCAAGC.................	19	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GACCTTTAGTGTCCCCTTTTATT-TTTGTT.............................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TTCT-GC--GTTCTTGTCGACCTTTA...................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGCCCCACATTGGATCAGCCACCA....................	28	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTGCCCCACATTGGATCAG..........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCCACCAAGCGCACCCGTGCC......	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCCACCAAGCGCACCCGTGC.......	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................C------------------------------------------------------------TAA-AAA-----ATAAGGT------------GACGT--TT----------------------------....................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCAGCCACCAAGCGCACCCG..........	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCACATTGGATCAGC.........................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCCACCAAGCGCACCCGTGCC......	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTGCCCCACATTGG...............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCTGCCCCACATTGGATC............................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCCACCAAGCGCACCC...........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCCACCAAGCGCAC.............	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCCTGCCCCACATTGGATCAGC.........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCACATTGGATCA...........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGCACCCGTGCCGAC...	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCAGCCACCAAGCGC...............	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................GACGT--TT----------------------------CTTTTTGT---TTAGTT...................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

TCTCTTTAGT-AGTTGACAATGT-----CTAAAAGTATTT-CGGAGAGATTT-----TTTATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-AAATA---ATAGGTT------------AAAGT--T-----------------------------ATTT--CTTTTT--G-TTT---------------------------------------------ATCATATTTTTGGC--GTCCTCGTCGACCTTTAGTGTTCCCTTTTTTTGTTTGCTGATTTATTAA-TC-TGGTTATCTTGACTTGCATTATCGTA------CCACCA-ACTAACCAC-----------------TTGATGTTTTC----CCCTGACTTTCAGTTATCCTGCCCCATATTGGATCCGCCACGAAGCGTACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TCTGTGTAGT-GGTTGAAACTGT-----CTAAAAGTATTT-CGGTGAGAT-------TTCATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-GAAGA---ATAGGTT------------ATGGT--T----------------------------------------------TT---------------------------------------------ATCATATTT-T-AC--GTCCTCGT-ACCCTTTCATGTTCGTCT-TT----TTGGTGACTTGTTAGAAC-TGGTTATCTTCCTACGCTTTATCGTA------TCTCAA-ACTAACCGC-----------------TTGCTGTGTTC----TGCCAACTTTCAGTTGTCCTGCCCCACATTGGCTCCGCCACGAAGCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCTGCTTAGT-AGTTGACAATGT-----CTAAAAGTATTT-CGGAGAGAT-------TTTGTTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------AAA-ATATA---AGAGGTT------------GAAGT--TT----------------------------TTTT--CTTTCTATATTTT---------------------------------------------ATC---------AC--GTCCTCTTCGACCTTTAATGTTCCCTT-TT----TTGGTGATTTATTAAAAC-TGGTTATCTAGCTTTGCTATATCTTACTTCAAACTCAA-ACTGACCAC-----------------TTGATGTTTTC----CTCTAACTTTCAGTTGTCCTGCCCCACATTGGATCCGCCACGAGGCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCAGTTGAGTTAGTTGACAATGT-----CTTAAAGTATTG-CGAAGAGAT-------TTTAGTAAGGTTTCTTGAAGGTTAT------------------------------------------------------------CAA-AAATT---GTAGGTT------------ACAGT---T----------------------------TA-T--GTTTCTTTATTTT---------------------------------------------GTCA-ATTT-T-TC--GTCTTC--TAAC-TTTGAAGTTCGTATTTT----TCTGTGATTTATTATTCG--AG---TCTTTCCTAGCAT-----TA------TCTTTA-ACTTATCAT-----------------TTGCTGTTTTTTTTTTTACAACTTTCAGTTATTCTACCTCATATTGGATCCGCCACAAATCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCTGCTTGGT-AGTTGACAATGT-----CTAAAAGTATTT-CAAAAAGAT-------TTAAGTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-CAATT---GCAGGTT------------TAAGT--TT----------------------------T-----GTTTCTTCTTTTT---------------------------------------------ATCATATTTTC-GC--GTCTTTCTTGACCTCTGATGTCCCTTTATT----TTGGTGATTTATTAAAAC-TGGTTATCTGGCTTGGCTTTATCGTC------ACTCAA-ACTAATCAC-----------------TTGATGTTTTT---TTCCCAACTTTTAGTTATCCTGCCCCATATTGGATCTGCCACAAAGCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCTGCTTAGT-AGTTGACAATGT-----CTAAAGAT-------------T-------TTTATTAAGGTTTCTTGAAGGTTAC------------------------------------------------------------CAA-AAA------TAGGCT-------------------------------------------------CCTT--CTTTTTGTATTTT---------------------------------------------ATCATATTTTT-TG--GACCTCCATGACCTTAAATGTTCCATTTTG----TTGATGATTTAATACAAC-TGCTTATCTGGCTTGGACTTATCTTG------ACTCAA-ACTAATCAG-----------------CTGCTGCTTTC----CCCTAACTTTCAGTTGTCCTGCCCCACATTGGATCCGCCACGAAGCGCACCCGTGCCGATATG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TCTGCTTAGTGGGTTGACATTGT-----CTAAAAGTATTTTCGGTGAGAT-------TTAACTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------AAA-CCATT-----CTTG------------------------------------------------------------CCATGT----------------------CTTTTAAAGGTTAAACTTAAAGTTTTATCTT--------------------CACC----------------------------------------------------TACAAATTAAGTTT------TGTTAA-ATTCACCACT--AACC----------TTGATTTATCT---ATGATCTCTTTCAGTTGTCCTGCCCCACATTGGCTCTGCCACGAAGCGAACTCGCGCCGAAATG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TCTACTTGGT-AGTTGACATAGT-----CTGGAAGTATTT-TG-AGAGAT-------TTTATTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------ATATAAA-A---AAAAGGC------------AAAAC--CC----------------------------CATT--AA----AAGGTTT---------------------------------------------AT----TTTAA-GT--GACCACCTTGACCTTAAA--------------------------------------------------------------------------------C---------------ATAATTGATTT--TG----TGTTCCCTTTCAGTTATCCTGCCCCACATTGGATCTGCCACGAAGCGAACCCGCGCCGACATG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGCCACGAAGCGAACCC...........	21	1	3.00	3	1	1	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGATCTGCCACGAAGC.................	20	1	2.00	2	1	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGCCACGAAGCGAACC............	20	1	2.00	2	0	2	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACATTGGATCTGCCACGAAGC.................	23	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCTGCCACGAAG..................	18	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGCCACGAAGCGAACCC...........	22	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCCACGAAGCGAACCC...........	20	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCTGCCACGAAGCGAACC............	24	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCACGAAGCGAACCCGCGCCGACAT.	29	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCTGCCACGAAGC.................	18	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCTGCCACGAAGCGAACC............	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCACATTGGATCTGCCACGA....................	23	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCTGCCACGAAGCG................	20	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTGGATCTGCCACGAAGC.................	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACGAAGCGAACCCGCGCCGACA..	25	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAAGCGAACCCGCGCCGAC...	22	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATCTGCCACGAAGC.................	19	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATTT--TG----TGTTT..........................................................	18	6	0.17	1	0	1	0	0	0	0

droBip1

TCTGCCTGGT-AGTTGACATGGT-----CTGGGAGTATTT-TG-AGAGAT-------TTTATTAAGGTTTTTTGAAGGTTAC------------------------------------------------------------AAT-AAA-A---AAAGACC------------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCG--------AGTAAA-AGTGACCACTTTAACCTTTAGCTTAATTGAGT--TTC----TGTTCACTTTCAGTTATCCTGCCCCACATTGGATCTGCCACCAAGCGAACCCGCGCCGACATG	Size	Hit Count	Total Norm	Total
No Reads

dp5

C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTAC-----------------TCCACATCTCC----CTCTTTCTAACAGTTGTCCTGCCCCACATAGGCTCTGCCACGAAGCGAACCCGTGCCGAGATG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACATAGGCTCTGCCACGAAGC.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCCTGCCCCACATAGG...............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCACATAGGCTCTGCCACGA....................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGCCCCACATAGGCTCTGC.........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCACGAAGCGAACCCGTGCCGA....	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACATAGGCTCTGCCACGAAG..................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCCACATAGGCTCTGCCACGA....................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCCTGCCCCACATAGGCTC............................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCACATAGGCTCTGC.........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCACGAAGCGAACCCGTGC.......	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATAGGCTCTGCCACGAAG..................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCGAACCCGTGCCGAGA..	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCTCTGCCACGAAGCGAACCCGT.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACCAC-----------------TCGACATCTCC----CTCTTTCTAACAGTTGTCCTGCCCCACATAGGCTCTGCCACGAAGCGAACCCGTGCCGAGATG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGCCCCACATAGGCTCTGCCAC......................	26	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCCACGAAGCGAACCCGTGC.......	24	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTGCCCCACATAGGCTC............................	21	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACATAGGCTCTGCCA.......................	18	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCTCTGCCACGAAGCGA...............	21	1	1.00	1	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCTCTGCCACGAAGCG................	19	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAACAGTTGTCCTGCCCCAC....................................	22	1	1.00	1	1	0	0	0	0	0

droWil2

CGAC-TTGGT-GGTA----ATGATTGAACCAAAAA--------AAAAAGT-------TGTGTTAAGGTTTCGTGAAGGTTAT------------------------------------------------------------GGA-GGAAATTTTTAGGCT------------GTGAACAT-----------------------------ATCA--CTCAAT--G-TTTGTCAAGATATTTACAATGTCTCTCTTTAAT---TTTTTAAGTTCTATCTTATCACT-TTGTCTTATTTTCGACCTCT------CGC-------------------------------TTATCTAGACA------ATTTTT------GTGTAA-TCTAAACAC-----------------TTGACTT---G----GCTTCAATTTCAGTTGTCCTCCCCCACATTGGCTCGGCGACGAAACGTACCCGTGCCGAAATG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCCCCCACATTGGCTC............................	20	1	3.00	3	0	0	0	3	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAACGTACCCGTGCC......	19	1	2.00	2	0	1	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCCCCACATTGGCTCGGCG........................	22	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCCCCCACATTGGCTCGGCGA.......................	25	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTCCCCCACATTGGCTC............................	21	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTCGGCGACGAAAC.................	19	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTCCCCCACATTGGCTCGGC.........................	24	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCGACGAAACGTACCC...........	20	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCCTCCCCCACATTGG...............................	20	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTCCCCCACATTGGCTCGGCGAC......................	27	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCCCCACATTGGCTCGGC.........................	21	1	1.00	1	0	1	0	0	0

droVir3

T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTTATTCTACCCCACATTGGCTCCGCCACCACGCGCACCCGCTCCGACATG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTACCCCACATTGGCTCCGC.........................	23	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCACCACGCGCACCCGC.........	22	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACCCCACATTGGCTCCGCC........................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTACCCCACATTGGCTCCGCC........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCACCACGCGCACCCGCTC.......	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTCTACCCCACATTGGCT.............................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCACCACGCGCACCCGCT........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCACCACGCGCACCCGCT........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTACCCCACATTGGCTCCGC.........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTCTACCCCACATTGGCT.............................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGCACCCGCTCCGACATG	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCACCACGCGCACC............	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCACATTGGCTCCGCC........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTACCCCACATTGGCTCCGCC........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATTGCAGCGA-------------------------------------------------------GGTTCCACTGTGATTCATAGCAAATCGAGTCGTTTTTGAGCTTTTGTTACCGCATACCTTGTTTGACTTCTAGTTCCAGA-AAA-A---AAAGAACTCGCTGCTGGCCTCAGT--TGGGTTTCTTCTGTATAGTAGATTTAAGTACA-T--GTCTCTTT-------------------------------------------------------------------------------------------------------------------------------------------A-TGCA------ACTCAAGGTCAACCGC-----------------TTCAC------------TTCTATTTCAGTTATTCTGCCCCACATTGGATCTGCCACCAATCGCACCCGCTCCGACATG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCCACCAATCGCACCCGCT........	23	1	1.00	1	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GCA------ACTCAAGGTCAACCGC-----------------TTC...........................................................................	22	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGATCTGCCACCAATC.................	20	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGCCACCAATCGCACC............	20	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCCCACATTGGATCTGC.........................	21	2	1.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TCAACCGC-----------------TTCAC------------TTCTATTTC....................................................	22	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCACCAATCGCACCCGCT........	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGCCCCACATTGGATCTG..........................	22	1	1.00	1	1	0	0	0	0	0

droGri2

T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTCATTATGCCGCACATTGGATCGGCCACAAATCGCACCCGTTCCGAGATG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCACATTGGATCGGCCACA.....................	22	1	1.00	1	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGGATCGGCCACAAATC.................	21	1	1.00	1	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACATTGGATCGGCCAC......................	20	1	1.00	1	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCCGCACATTGGATCGGC.........................	22	1	1.00	1	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACATTGGATCGGCCAC......................	19	1	1.00	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCACATTGGATCGGCCACAAATC.................	26	1	1.00	1	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACATTGGATCGGCCACA.....................	19	1	1.00	1	1	0

dsi_8737

2l:20279429-20279578 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-19.0	-18.9	-18.9