ID:

dsi_8538

 Coordinate:

2r:1321072-1321257 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -6.0 -5.9 -5.8

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dsi_10174  2l:22491796-22491821 -
  2. dsi_8538  2r:1321143-1321168 -
star
  1. dsi_10174  2l:22491740-22491760 -
  2. dsi_8538  2r:1321087-1321107 -

Sense Strand Reads

ATGCGCACTCAATACCCATTAACCCCCCACTTCTAATTCCGCACCTGCTATCGCTTACCACGGATGACATTGTACTGCCCTTTCTGTATCTATCGCTACGAAACTACGAATGGGGCACGCAATGCTATCAACGCCACGTAAACTGTACATTCAACGAATCATGAATGCCACACAACCAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAG
*******************************************************************************************************************************************...............................................................(((..((.....))..)))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGAGT.................... 27 0 2 5.50 11 10 1 0 0 0 0
...............................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGA...................... 25 0 2 2.00 4 4 0 0 0 0 0
...........................................................................................................................................AAACTGTACATTCAACGAATCATGAA......................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGAG..................... 26 0 2 1.00 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGG...................... 25 1 2 1.00 2 2 0 0 0 0 0
........................................................................................................................................................................................................ATATTCGCCCACATGGACAAT................................................................. 21 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................TCTGAGTTTATGCCCTTGGA....... 20 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGCTTC............................................ 27 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AATCTCGTGAACTGCCAGTGC............................................... 21 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGC............................................... 24 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AATCTCGTGAACTGCCAGTGCT.............................................. 22 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................TCCCCGTTCGGAAAGCACTTCTGAGT.................... 26 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCCCTTGGA....... 24 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................TCAACGAATCATGAATGCCA.................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0
......................................................................................................................................................................................................................GGACAATCTCGTGAACTGCCAGTGCT.............................................. 26 0 2 0.50 1 0 0 1 0 0 0
....................................................................................................................................................................................................................ATGGACAATCTCGTGAACT....................................................... 19 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................TCCCCGTTCGGAAAGCACTTC......................... 21 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CACATGGACAATCTCGTGAACTGCC.................................................... 25 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCC............. 18 0 2 0.50 1 1 0 0 0 0 0
..........................................................CACGGATGACATTGTACTGC................................................................................................................................................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................TCTGAGTTTATGCCCTTGGG....... 20 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................CTTCCCCGTTCGGAAAGCACT........................... 21 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................TCGGAAAGCACTTCTGAGT.................... 19 0 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................................................................................CAAGATATTCGCCCACATGGAC.................................................................... 22 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................CTTCCCCGTTCGGAAAGCACTTCTGAGT.................... 28 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCCCGTGG........ 23 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................ATCTCGTGAACTGCCAGTGCT.............................................. 21 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................................................CATGGACAATCTCGTGAACTGCCA................................................... 24 0 2 0.50 1 0 1 0 0 0 0
.............................................................................................................................................................................................................CGCCCACATGGACAATCTCGTGAACC....................................................... 26 1 2 0.50 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................CCCCGTTCGGAAAGCACTTCTGA...................... 23 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................................ATGGACAATCTCGTGAACTGCCAGTGC............................................... 27 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................................TCTCGTGAACTGCCAGTGC............................................... 19 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................GCCCACATGGACAATCTCGTGA.......................................................... 22 0 2 0.50 1 0 0 1 0 0 0
........................................................................................................................................................................................................ATATTCGCCCACATGGACAATCTCGT............................................................ 26 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGCT.............................................. 25 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................................AACGAATCATGAATGCCACACAACCAAA.......................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AATCTCGTGAACTGCCAGT................................................. 19 0 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................................................................CGCCCACATGGACAATCTCGTGAACT....................................................... 26 0 2 0.50 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................ATCTCGTGAACTGCCAGT................................................. 18 0 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................GCTTCCCCGTTCGGAAAG............................... 18 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................AAGCACTTCTGAGTTTATGCCCTTGGA....... 27 0 2 0.50 1 0 0 1 0 0 0
...............................................................................................................................................TGTACATTCAACGAATCAT............................................................................................................................ 19 0 2 0.50 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................................CCCCGTTCGGAAAGCACTTCTGAC..................... 24 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................................................GATATTCGCCCACATGGACAATCTC.............................................................. 25 0 2 0.50 1 1 0 0 0 0 0
...............................................CTATCGCTTACCACGGAT............................................................................................................................................................................................................................. 18 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AATCTCGTGAACTGCA.................................................... 16 1 3 0.33 1 0 0 0 1 0 0
......................................................................................................................................................TCCACGACTCATGAATG....................................................................................................................... 17 2 6 0.17 1 0 0 0 1 0 0
.............................................................................................................................................ACTGTTCATTCAACGGATA.............................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
........................................................................TACTGCCCTGACTGTA...................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

TACGCGTGAGTTATGGGTAATTGGGGGGTGAAGATTAAGGCGTGGACGATAGCGAATGGTGCCTACTGTAACATGACGGGAAAGACATAGATAGCGATGCTTTGATGCTTACCCCGTGCGTTACGATAGTTGCGGTGCATTTGACATGTAAGTTGCTTAGTACTTACGGTGTGTTGGTTTTATGTTTTAATTGCTCGATCTATAAGCGGGTGTACCTGTTAGAGCACTTGACGGTCACGAAGGGGCAAGCCTTTCGTGAAGACTCAAATACGGGAACCTTCTCTTC
*****************************************************************...............................................................(((..((.....))..)))******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
.........GTCATGAGTAATTGGGGGGGG................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................AGGGGCAAGCCTTTCGTGAAGACT...................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................AAGCGGGTGTACCTGTTAGAGCACTT......................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGTGTACCTGTTAGAGCACTT......................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGACGGTCACGAAGGGGCAAGCCT.................................. 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.......GAGGTATGGGTAATTGGAGGGG................................................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................AAGGGGTAAGCCTTTAGT............................. 18 2 9 0.22 2 1 0 0 0 0 0 1 0 0
..........................................................................................ATAGCGATGCTCGGATG................................................................................................................................................................................... 17 2 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................ATACGGGAACCGTCT.... 15 1 9 0.11 1 0 0 0 0 0 0 0 0 1
.............................................ACGCTAGCGAATGGTGG................................................................................................................................................................................................................................ 17 2 11 0.09 1 0 0 0 0 0 0 0 1 0
......AGAGTTATGTGTAATT........................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................AGGCTTGAACGCTAGCGAA...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................................AAGGGGTAAGCCTTTATTG............................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:1321022-1321307 - dsi_8538 ATGC------GCACTCAATACCCATTAACCCCCCACTTCTAATTCCGCACCTGCTATCGCTT------ACCACGGATGACATTGTACTGCCC-TTTCT-GTATCTATCGCTAC---GAAACTA--CGAA------------TGGGGCACGCAATGCT---------ATCAACGCCACG--------TAA-------------------ACTGTACATTCAAC-----GA-ATCATGAATG---CCACACAACCAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAG
droSec2 scaffold_6:106739-107024 + ATGC------GCACTCAATACCCTTTAACCACCCACTTCTAATTCCGCACCTGCTATCGCTT------ACAACGGATGACATTGTACTGTCC-TTTCT-GTATCTATCGCTAC---GAAACTA--CGAA------------TGGGGCACGCAATGCT---------ATCAACGCCACG--------TAA-------------------ACTGTACATTCAAC-----GA-ATCATGAATG---CCACACAACCAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAG
dm3 chr3RHet:2478776-2479075 + GC----------ACTCGATACCCATTAACACCCCACTCTTAATTACGCACCTGCTATCGCTT------ACAACGGATGACATTGTACTGTCC-TTTCT-GTTTCTATCGCTAC---GAAACTA--CGAA------------TG-GGCACGCAATGCT---------ATCAATGCCACC--------TTAAATCGACCCTCTATTTTCAACTGTACATTCAAC-----GA-ATCATGAATG---CCGCACAAACAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAG
droEre2 scaffold_4770:335591-335882 + A-------------------CCCATTAACC--CCACTCTCAAATACTCACCTGCTACCGCTT------ACAACGGATGTCATTGCACTGTCC-TTTCT-GGTTTTATCGCCACGGTGGAACTG--CGAA------------TG-GACACGCAATGCT---------ATCAACGCCACC--------TAAAACCGACCCTCTATTTTCAAATGTACATTCAAC-----GA-AACATGAATG---CCACACAACCAAAATGATAAATTAACGAGCTAGATATTCGCCCACATGGACAATCCCGTGAACTGCCAGTGCTTCCCCGTTCGGAGAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAG
droYak3 3R:329199-329492 + AT-----------------ACCCATTAACT--CCACTCTCAAATACGCACCTGCTATCGCTT------ACAACGGATGTCATTGCATTTTTT-TTTCT-GTTCCTATCGCCACGGTGAAACTA--TAAA------------TG-TGCACCTAATGCT---------ATCAACGCCACC--------TAAAACCGACCCTCTATTTTCGACTGTACATTCAAC-----GA-AATATGAATG---CCACACAACCAAAATGCAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCCCGTGAACTGCCAGTGCTACCCCGCTCGGAAAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAG
droEug1 scf7180000409540:4844-5133 + ATT-------ATACTCGATATGCATTAACC--TCA------------CATACGCTGTTGCTC------ACAACAAATGGCATTGCTTTTGTCTTTTCG-GTTAACATTGGCACGATGGAATTG--CAA--------------T-ACCACGCAATACC---------ATTAACGCTGCCG------CGGTAAACGACATTATATATACCACTATACATCCAACGCAACGA-T------ATG---CCATGCAACCAA-ATG-AAAATTAATATACTAGAAATTCGTCCGCATGGGCAATCCCGTAAACTGCCAGTTCTTCCCCGTTCAGAGAGCACTTCTGAGATCATGCCATTGGAAGAGAAG
droBia1 scf7180000301256:50335-50644 + GTCT------TAACTAAATATATATTAACC--CAAATCACACACACGCACTTGATCTTGCTC------GCAATGGGTGCCATCGCAATGTGCTTTTCG-GTGTCCATTGTCATGGTGGAAATATCGGAA------------AT-ATCACGCAACGCC---------ATCAATGCCACCT------CTAAAATTGACCTTGCATATGCAACCGTACATCGAACGAATCAA-AATATC-ATG---CCTCGCAATTGAAATGGAAAATTAAC----TAGAAATTCGTCCGCATGGACATTCCCGTGAACTGCCAGTGCTTCCGCGTTCGGAGAGCACTTCGGAATTTATGCCTTTGGAAGAAAAA
droTak1 scf7180000410621:28836-29137 - GGG---ACCTACACTCAATTCCCATTAACC--ACACATAAACACACGCACTTGCTCTTGCTC------ACAATGGGTGCAATTGAATTGTGCTTTTTG-GCTTCCATTGCCATGGTGGAACTG--C----------------C-GGCACGCAATGCC---------ATTAACGTCACCG------CTAAAATCAACTCAACA-ATGCAACTGTACATCCAACGGAACGA-AACATTA--------CCGCAATTAAATTGCAAAATTAAC----CAGAAATTCGTCCACATGGACAATCCCGTGAACTACCAGTGCTTCCGCGTTCGGAGAGCACTTCTGAATTTATGCCCTTGGAGGAAAAG
droEle1 scf7180000491278:34401-34682 + GTGG-CACATACACATAA-ACCCATTAACC--T-----AAACACACGCATCGGCGCTTGTTC------ACAACTG-------------GTCCTTTTCC-GTTTCCATTGCCACGGTGAAACTG--CAAA------------AC-GGCTCCCAATAAC---------ATCAATGCCACCG------CTAA-ATCAAATATGTATTTGCAACTGCACATCCAACGCAACGA-AACATCAA-------------------TGACAAATTAACCAAATAGAAATTCGTCCACATGGACAATCCCGTGAACTGCCAGTCCTTCCGCGTTCGGAGAGCACTTCTGAGTTTATGCCCTTGGAAGAAAAG
droRho1 scf7180000775729:4924-5235 + GTGGGCACCTACACTCAAACCCCATTAACC--C-----ACACACATGCACCGGCTCTTTTAC------ACATATGGTGCGATTGCATCGTCCTTTTCC-GTTTCCTTTGCCACTGTGAAACT----GAA------------TT-GGCACGCAATAAC---------ATCAATGCCACCG------CTAAAATCGACAATGTATTTGCAACTGTACATCCAACGCAACGA-AACATCAATG---CCACGCAATCAAAATGAAAAATTAACCAAATAGAAATTCGCCCACATGGACAATCCCGTGAACTTCCAGTGCTGCCGCGTTCGGAGAGCACTTCTGAGTTCATGCCTTTGGAAGAGAAG
droFic1 scf7180000454068:14474-14769 - AGGT------GCACTGAA-ACCCATTAACC--TCACTCACAAAGTCTCACCTGCTCTTGCTC------CCCACGGACG-CGTTGCTTCGATCTTTTCC-GTTTC-A-TGCCACGGTGGAACTA--CGAA------------TC-GCTACG-AACGCC---------ATTACTGTCATCG------CTAAAAT-GCAACTGTAA----------ACAT-CAACGCAATGA-AACATCAACC---CCACACAATCAAAATTCGGAATTAACCAAATAGAAATTCGTCCACATGGGCAATCCCGTGAACTGCCAGTTATTCCGCGTTCGGACAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAG
droKik1 scf7180000302297:44887-45197 - ACA--------CACCCAA-ACTCA-TAACC--ACGCTTTCACACTCGCACCTGCTCTTGCCTTTGGCCACGATGGCTGCATCTGCTTCGTCCTGTTTT-GTC----------TGGTGGAACTG--AAAA------------AC-AACTCTCAATACCATCAACGCCATAAATGTCACCGCAACCGTTGA-ATTGCAACTGTAAATGCCACTGCACATCCAACGCGACAA-ATTATCAATGCCA--ACG--AC--GAATGCCAAACTA-----ATAGATATTCGCCCACATGGACCATCCCGTGAATTACCAGTGCTTCCGAGATCGGAAAGCACCTCGGAGTTTATGCCCCTGGAAGAAAAA
droAna3 scaffold_12911:1985146-1985251 + ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTAACCAACCAGAAATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTAATACCGCGTTCCGACAGCACTTCGGAGTTCATGCCAATGGAAGAAAAA
droBip1 scf7180000396714:1066742-1066847 - ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTAACCAACCAGAAATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTAATACCGCGTTCTGACAGCACTTCGGAATTCATGCCTATGGAAGAAAAG
dp5 2:24969602-24969717 - ACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCCATGCCAAATTAACCAA-TAGATATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCAGACAGCACCTCAGAGTTCATGCCGCTGGAGGAGAAG
droPer2 scaffold_6:268273-268389 - ACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCCATGCCAAATTAACCAAATAGATATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCAGACAGCACCTCAGAGTTCATGCCGCTGGAGGAGAAG
droWil2 scf2_1100000004943:13602621-13602760 - TCGT------CCAA-----------------------------------------------------------------------------------------------CCA--------------------------------------TGATGCC---------ATCAA--------------------------------------------------------------------------ACGCCATCCAATGACAAAATTAACAAAACAGAATTGCGTCCACATGGACAAACTCGTGAATTGCCAGTTTTGCCCCGTTCGGACAGTACATCTGAATTTATGCCCCTCGAAGAGAAG
droVir3 scaffold_13047:13616404-13616553 + AAC----------------------------------------------------------------------------------------------------------------------TG--CAAA------------TG-CAAA--------------------------------------------------------------TGC--------------AA-ATTGGCACCGTCA--ACACCATTTAAATGCCAAATTAACCGAACAGAGTTGCGTCCACATGGACAAACTCGTGAATTGCCAGTGTTGCCACGCTCGGAGAGCACATCGGAATTTATGCCCCTAGAAGAGAAG
droMoj3 scaffold_6540:10862901-10863042 + ATTC------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--------------AA-ATCGGCAACGTCA--ACACCATTCAAATACCAAATTAACCGAACAGAGTTGCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCGGATAGCACATCGGAATTCATGCCAATGGCGGAGAAG
droGri2 scaffold_15074:400132-400356 - C---------------------------------------------GCAACTGCAACCGC-------------------CATTGCAACACCT-TTTCTTGC-----------------AACTG--CAAATGCAAATACAAATACAACGGTTAATGCC---------ATTAA------------------------------------------ACGTGCAACGCCATTAAATCGCCAACGTCA--ACACTATCAAAATGTTAAACTAACTGAACAGAGTTGCGCCCGCATGGACAAACTCGTGAATTACCAGTGTTGCCACGTTCGGATAGCACCGCGGAGTTCATGCCGCTCGAGGAGAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGC------GCACTCAATACCCATTAACCCCCCACTTCTAATTCCGCACCTGCTATCGCTT------ACCACGGATGACATTGTACTGCCC-TTTCT-GTATCTATCGCTAC---GAAACTA--CGAA------------TGGGGCACGCAATGCT---------ATCAACGCCACG--------TAA-------------------ACTGTACATTCAAC-----GA-ATCATGAATG---CCACACAACCAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGAGT....................2725.5011010100000000000000
...........................................................................................................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGA......................2522.00404000000000000000
...........................................................................................................................................................................................AA-------------------ACTGTACATTCAAC-----GA-ATCATGAA............................................................................................................................2621.00202000000000000000
...........................................................................................................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGAG.....................2621.00202000000000000000
...........................................................................................................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGG......................2521.00202000000000000000
....................................................................................................................................................................................................................................................................................ATATTCGCCCACATGGACAAT.................................................................2120.50101000000000000000
...............................................................................................................................................................................................................................................................................................................................................TCTGAGTTTATGCCCTTGGA.......2020.50101000000000000000
...................................................................................................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGCTTC............................................2720.50101000000000000000
......................................................................................................................................................................................................................................................................................................AATCTCGTGAACTGCCAGTGC...............................................2120.50101000000000000000
...................................................................................................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGC...............................................2420.50101000000000000000
......................................................................................................................................................................................................................................................................................................AATCTCGTGAACTGCCAGTGCT..............................................2220.50101000000000000000
............................................................................................................................................................................................................................................................................................................................TCCCCGTTCGGAAAGCACTTCTGAGT....................2620.50101000000000000000
...........................................................................................................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCCCTTGGA.......2420.50101000000000000000
.........................................................................................................................................................................................................................TCAAC-----GA-ATCATGAATG---CCA....................................................................................................................2020.50100100000000000000
..................................................................................................................................................................................................................................................................................................GGACAATCTCGTGAACTGCCAGTGCT..............................................2620.50100010000000000000
................................................................................................................................................................................................................................................................................................ATGGACAATCTCGTGAACT.......................................................1920.50101000000000000000
............................................................................................................................................................................................................................................................................................................................TCCCCGTTCGGAAAGCACTTC.........................2120.50101000000000000000
.............................................................................................................................................................................................................................................................................................CACATGGACAATCTCGTGAACTGCC....................................................2520.50101000000000000000
...........................................................................................................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCC.............1820.50101000000000000000
......................................................................CACGGATGACATTGTACTGC................................................................................................................................................................................................................................................................................2020.50100100000000000000
...............................................................................................................................................................................................................................................................................................................................................TCTGAGTTTATGCCCTTGGG.......2020.50101000000000000000
..........................................................................................................................................................................................................................................................................................................................CTTCCCCGTTCGGAAAGCACT...........................2120.50101000000000000000
...................................................................................................................................................................................................................................................................................................................................TCGGAAAGCACTTCTGAGT....................1920.50100100000000000000
..........................................................................................................................................................................................................................................................................................................................CTTCCCCGTTCGGAAAGCACTTCTGAGT....................2820.50100010000000000000
.......................................................................................................................................................................................................................................................................................................ATCTCGTGAACTGCCAGTGCT..............................................2120.50101000000000000000
...............................................................................................................................................................................................................................................................................................CATGGACAATCTCGTGAACTGCCA...................................................2420.50100100000000000000
.........................................................................................................................................................................................................................................................................................CGCCCACATGGACAATCTCGTGAACC.......................................................2620.50100100000000000000
.............................................................................................................................................................................................................................................................................................................................CCCCGTTCGGAAAGCACTTCTGA......................2320.50101000000000000000
................................................................................................................................................................................................................................................................................................ATGGACAATCTCGTGAACTGCCAGTGC...............................................2720.50101000000000000000
........................................................................................................................................................................................................................................................................................................TCTCGTGAACTGCCAGTGC...............................................1920.50101000000000000000
..........................................................................................................................................................................................................................................................................................GCCCACATGGACAATCTCGTGA..........................................................2220.50100010000000000000
....................................................................................................................................................................................................................................................................................ATATTCGCCCACATGGACAATCTCGT............................................................2620.50101000000000000000
...................................................................................................................................................................................................................................................................................................GACAATCTCGTGAACTGCCAGTGCT..............................................2520.50101000000000000000
...........................................................................................................................................................................................................................AAC-----GA-ATCATGAATG---CCACACAACCAAA..........................................................................................................2820.50101000000000000000
......................................................................................................................................................................................................................................................................................................AATCTCGTGAACTGCCAGT.................................................1920.50100010000000000000
.........................................................................................................................................................................................................................................................................................CGCCCACATGGACAATCTCGTGAACT.......................................................2620.50100100000000000000
.......................................................................................................................................................................................................................................................................................................ATCTCGTGAACTGCCAGT.................................................1820.50100010000000000000
.........................................................................................................................................................................................................................................................................................................................GCTTCCCCGTTCGGAAAG...............................1820.50101000000000000000
........................................................................................................................................................................................................................................................................................................................................AAGCACTTCTGAGTTTATGCCCTTGGA.......2720.50100010000000000000
..................................................................................................................................................................................................................TGTACATTCAAC-----GA-ATCAT...............................................................................................................................1920.50100010000000000000
.............................................................................................................................................................................................................................................................................................................................CCCCGTTCGGAAAGCACTTCTGAC.....................2420.50101000000000000000
...................................................................................................................................................................................................................................................................................GATATTCGCCCACATGGACAATCTC..............................................................2520.50101000000000000000
.....................................................CTATCGCTT------ACCACGGAT.............................................................................................................................................................................................................................................................................................1820.50101000000000000000
......................................................................................................................................................................................................................................................................................................AATCTCGTGAACTGCA....................................................1630.33100000000001000000
droSec2
ATGC------GCACTCAATACCCTTTAACCACCCACTTCTAATTCCGCACCTGCTATCGCTT------ACAACGGATGACATTGTACTGTCC-TTTCT-GTATCTATCGCTAC---GAAACTA--CGAA------------TGGGGCACGCAATGCT---------ATCAACGCCACG--------TAA-------------------ACTGTACATTCAAC-----GA-ATCATGAATG---CCACACAACCAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................CACTTCTGAGTTTATGCCCTT..........2111.0010100
.........................................................................................................................................................................................................................................................................................................................GCTTCCCCGTTCGGAAAGCACTTCTGAGTT...................3011.0010100
........................................................................................................................................................................................................................................................................................................................................AAGCACTTCTGAGTTTATGCCCTTGG........2611.0011000
...................................................................................................................................................................................................................................................................................GATATTCGCCCACATGGACAATCTCGT............................................................2711.0011000
.......................................................................................................................................................................................................................................................................................................ATCTCGTGAACTGCCAGTGC...............................................2011.0011000
.....................................................................................................................................................................................................................................................................................................CAATCTCGTGAACTGCCAGTGC...............................................2211.0010100
dm3
GC----------ACTCGATACCCATTAACACCCCACTCTTAATTACGCACCTGCTATCGCTT------ACAACGGATGACATTGTACTGTCC-TTTCT-GTTTCTATCGCTAC---GAAACTA--CGAA------------TG-GGCACGCAATGCT---------ATCAATGCCACC--------TTAAATCGACCCTCTATTTTCAACTGTACATTCAAC-----GA-ATCATGAATG---CCGCACAAACAAAATACAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCTCGTGAACTGCCAGTGCTTCCCCGTTCGGAAAGCACTTCTGAGTTTATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................AGTGCTTCCCCGTTCGGAAAG...............................2113.0030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGGACAATCTCGTGAACTGCCAGTGC...............................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATGGACAATCTCGTGAACTGCC....................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
........................................................................................................................CTA--CGAA------------TG-GGCACGCAATGC..............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000
..................................................................................................................................................................................................................................................................................................................TGCCAGTGCTTCCCCGTTCGG...................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................TA--CGAA------------TG-GGCACGCAATGCT---------....................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ACAATCTCGTGAACTGCCAGT.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................C-TTTCT-GTTTCTATCGCTAC---GAAACT................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................T------ACAACGGATGACATTGTACT..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................CTAC---GAAACTA--CGAA------------TG-GGCA......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTCGTGAACTGCCAGTGCTTC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAAATTAACGAGCTAGATATT.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CCCACATGGACAATCTCGTGAACTGCC....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................TA--CGAA------------TG-GGCACGCAATGCT---------ATCAA...............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCTCGTGAACTGCCAGTGCTT.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CATTGTACTGTCC-TTTCT-GTT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CGAGCTAGATATTCGCCCACA.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................TAC---GAAACTA--CGAA------------TG-GGCACGCAA.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GCTTCCCCGTTCGGAAAGCACTTCTGA......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CATGGACAATCTCGTGAACTGCCAGT.................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AACTGCCAGTGCTTCCCCGTTCGG...................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CTGCCAGTGCTTCCCCGTTCG....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................GCTT------ACAACGGATGACATT.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................TG-GGCACGCAATGCT---------ATCAAT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GAA------------TG-GGCACGCAATGCT---------AT..................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................TTAATTACGCACCTGCTATCG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TTTATGCCCTTGGAAGAGAAG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CTAGATATTCGCCCACATGGA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCGCTT------ACAACGGATGACATTGTAC...................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................C---GAAACTA--CGAA------------TG-GGCACGC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CGAA------------TG-GGCACGCAATGCT---------ATCAA...............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATTAACGAGCTAGATATTCGC..............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGCTTCCCCGTTCGGAAAGCA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGAACTGCCAGTGCTTCCCCGTT......................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACAACGGATGACATTGTACTGTCC-.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCAACTGTACATTCAAC-----GA-AT..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AATCTCGTGAACTGCCAGTGCTTCC...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CAACGGATGACATTGTACTGTCC-TT...........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GCACGCAATGCT---------ATCAATGCCACC--------TTAAATCG........................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATGGACAATCTCGTGAACTGCCA...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................TT------ACAACGGATGACATTGTAC...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CGCTT------ACAACGGATGACATT.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................ACGGATGACATTGTACTGTC...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTT------ACAACGGATGACATTGTACTGT................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TTCCCCGTTCGGAAAGCACTTCTGAGT....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
A-------------------CCCATTAACC--CCACTCTCAAATACTCACCTGCTACCGCTT------ACAACGGATGTCATTGCACTGTCC-TTTCT-GGTTTTATCGCCACGGTGGAACTG--CGAA------------TG-GACACGCAATGCT---------ATCAACGCCACC--------TAAAACCGACCCTCTATTTTCAAATGTACATTCAAC-----GA-AACATGAATG---CCACACAACCAAAATGATAAATTAACGAGCTAGATATTCGCCCACATGGACAATCCCGTGAACTGCCAGTGCTTCCCCGTTCGGAGAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................TTTATCGCCACGGTGGAACTG--CGAA------------TG-..........................................................................................................................................................................................................................2711.0010000100
...............................................................................................TCT-GGTTTTATCGCCACGGTGGA...................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................GCACTTCTGAGTTCATGCCCTTG.........2311.0011000000
.................................................................................................................................................................................................................................................................................................TGGACAATCCCGTGAACTGCCAGTGC...............................................2611.0010001000
................................................................................................................................................................................................................................................................................................................................CGTTCGGAGAGCACTTCTGAGT....................2211.0011000000
droYak3
AT-----------------ACCCATTAACT--CCACTCTCAAATACGCACCTGCTATCGCTT------ACAACGGATGTCATTGCATTTTTT-TTTCT-GTTCCTATCGCCACGGTGAAACTA--TAAA------------TG-TGCACCTAATGCT---------ATCAACGCCACC--------TAAAACCGACCCTCTATTTTCGACTGTACATTCAAC-----GA-AATATGAATG---CCACACAACCAAAATGCAAAATTAACGAGCTAGATATTCGCCCACATGGACAATCCCGTGAACTGCCAGTGCTACCCCGCTCGGAAAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................CTGAGTTCATGCCCTTGGAAGAGA..2411.00101000000000
..................................................................................................................................................................................................................................................................................................................TGCCAGTGCTACCCCGCTCGG...................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................GCCAGTGCTACCCCGCTCGGAAAGC..............................2511.00100000010000
..................................................................................................................................................................................................................................................................................................GGACAATCCCGTGAACTGC.....................................................1911.00100100000000
.................................................................................................................................................................................................................................................................................................TGGACAATCCCGTGAACTGCC....................................................2111.00100010000000
.....................................................................................................................................................................................................................................................................AAATTAACGAGCTAGATATT.................................................................................2011.00100000010000
droEug1
ATT-------ATACTCGATATGCATTAACC--TCA------------CATACGCTGTTGCTC------ACAACAAATGGCATTGCTTTTGTCTTTTCG-GTTAACATTGGCACGATGGAATTG--CAA--------------T-ACCACGCAATACC---------ATTAACGCTGCCG------CGGTAAACGACATTATATATACCACTATACATCCAACGCAACGA-T------ATG---CCATGCAACCAA-ATG-AAAATTAATATACTAGAAATTCGTCCGCATGGGCAATCCCGTAAACTGCCAGTTCTTCCCCGTTCAGAGAGCACTTCTGAGATCATGCCATTGGAAGAGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTCT------TAACTAAATATATATTAACC--CAAATCACACACACGCACTTGATCTTGCTC------GCAATGGGTGCCATCGCAATGTGCTTTTCG-GTGTCCATTGTCATGGTGGAAATATCGGAA------------AT-ATCACGCAACGCC---------ATCAATGCCACCT------CTAAAATTGACCTTGCATATGCAACCGTACATCGAACGAATCAA-AATATC-ATG---CCTCGCAATTGAAATGGAAAATTAAC----TAGAAATTCGTCCGCATGGACATTCCCGTGAACTGCCAGTGCTTCCGCGTTCGGAGAGCACTTCGGAATTTATGCCTTTGGAAGAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
GGG---ACCTACACTCAATTCCCATTAACC--ACACATAAACACACGCACTTGCTCTTGCTC------ACAATGGGTGCAATTGAATTGTGCTTTTTG-GCTTCCATTGCCATGGTGGAACTG--C----------------C-GGCACGCAATGCC---------ATTAACGTCACCG------CTAAAATCAACTCAACA-ATGCAACTGTACATCCAACGGAACGA-AACATTA--------CCGCAATTAAATTGCAAAATTAAC----CAGAAATTCGTCCACATGGACAATCCCGTGAACTACCAGTGCTTCCGCGTTCGGAGAGCACTTCTGAATTTATGCCCTTGGAGGAAAAGSizeHit CountTotal NormTotal
No Reads
droEle1
GTGG-CACATACACATAA-ACCCATTAACC--T-----AAACACACGCATCGGCGCTTGTTC------ACAACTG-------------GTCCTTTTCC-GTTTCCATTGCCACGGTGAAACTG--CAAA------------AC-GGCTCCCAATAAC---------ATCAATGCCACCG------CTAA-ATCAAATATGTATTTGCAACTGCACATCCAACGCAACGA-AACATCAA-------------------TGACAAATTAACCAAATAGAAATTCGTCCACATGGACAATCCCGTGAACTGCCAGTCCTTCCGCGTTCGGAGAGCACTTCTGAGTTTATGCCCTTGGAAGAAAAGSizeHit CountTotal NormTotal
No Reads
droRho1
GTGGGCACCTACACTCAAACCCCATTAACC--C-----ACACACATGCACCGGCTCTTTTAC------ACATATGGTGCGATTGCATCGTCCTTTTCC-GTTTCCTTTGCCACTGTGAAACT----GAA------------TT-GGCACGCAATAAC---------ATCAATGCCACCG------CTAAAATCGACAATGTATTTGCAACTGTACATCCAACGCAACGA-AACATCAATG---CCACGCAATCAAAATGAAAAATTAACCAAATAGAAATTCGCCCACATGGACAATCCCGTGAACTTCCAGTGCTGCCGCGTTCGGAGAGCACTTCTGAGTTCATGCCTTTGGAAGAGAAGSizeHit CountTotal NormTotal
No Reads
droFic1
AGGT------GCACTGAA-ACCCATTAACC--TCACTCACAAAGTCTCACCTGCTCTTGCTC------CCCACGGACG-CGTTGCTTCGATCTTTTCC-GTTTC-A-TGCCACGGTGGAACTA--CGAA------------TC-GCTACG-AACGCC---------ATTACTGTCATCG------CTAAAAT-GCAACTGTAA----------ACAT-CAACGCAATGA-AACATCAACC---CCACACAATCAAAATTCGGAATTAACCAAATAGAAATTCGTCCACATGGGCAATCCCGTGAACTGCCAGTTATTCCGCGTTCGGACAGCACTTCTGAGTTCATGCCCTTGGAAGAGAAGSizeHit CountTotal NormTotal
No Reads
droKik1
ACA--------CACCCAA-ACTCA-TAACC--ACGCTTTCACACTCGCACCTGCTCTTGCCTTTGGCCACGATGGCTGCATCTGCTTCGTCCTGTTTT-GTC----------TGGTGGAACTG--AAAA------------AC-AACTCTCAATACCATCAACGCCATAAATGTCACCGCAACCGTTGA-ATTGCAACTGTAAATGCCACTGCACATCCAACGCGACAA-ATTATCAATGCCA--ACG--AC--GAATGCCAAACTA-----ATAGATATTCGCCCACATGGACCATCCCGTGAATTACCAGTGCTTCCGAGATCGGAAAGCACCTCGGAGTTTATGCCCCTGGAAGAAAAASizeHit CountTotal NormTotal
No Reads
droAna3
ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTAACCAACCAGAAATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTAATACCGCGTTCCGACAGCACTTCGGAGTTCATGCCAATGGAAGAAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................AAACTCGTGAATTGCCAGT.................................................1911.001010000
...............................................................................................................................................................................................................................................................................................CATGGACAAACTCGTGAATTGCCAGT.................................................2611.001000100
.........................................................................................................................................................................................................................................................................................................................AATACCGCGTTCCGACAGCACTTCGGA......................2711.001100000
...............................................................................................................................................................................................................................................................................................CATGGACAAACTCGTGAATTGCCAGTA................................................2711.001100000
droBip1
ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTAACCAACCAGAAATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTAATACCGCGTTCTGACAGCACTTCGGAATTCATGCCTATGGAAGAAAAGSizeHit CountTotal NormTotal
No Reads
dp5
ACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCCATGCCAAATTAACCAA-TAGATATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCAGACAGCACCTCAGAGTTCATGCCGCTGGAGGAGAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................TGCCAGTGTTGCCGCGCTCA....................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................GTTCATGCCGCTGGAGGA....1811.0010000010000
..........................................................................................................................................................................................................................................................................................................................TTGCCGCGCTCAGACAGCACCT..........................2211.0010100000000
..............................................................................................................................................................................................................................................................................................TCATGGACAAACTCGTGAATTGCCAGT.................................................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GCACCTCAGAGTTCATGCCGCTGGAG......2611.0010100000000
............................................................................................................................................................................................................................................................................................CCTCATGGACAAACTCGTGA..........................................................2011.0010100000000
droPer2
ACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCCATGCCAAATTAACCAAATAGATATTCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCAGACAGCACCTCAGAGTTCATGCCGCTGGAGGAGAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................GTTGCCGCGCTCAGACAG...............................1815.005500000
.........................................................................................................................................................................................................................................................................................................................GTTGCCGCGCTCAGACAGCACCT..........................2311.001100000
droWil2
TCGT------CCAA-----------------------------------------------------------------------------------------------CCA--------------------------------------TGATGCC---------ATCAA--------------------------------------------------------------------------ACGCCATCCAATGACAAAATTAACAAAACAGAATTGCGTCCACATGGACAAACTCGTGAATTGCCAGTTTTGCCCCGTTCGGACAGTACATCTGAATTTATGCCCCTCGAAGAGAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................GCCCCGTTCGGACAGTACATC.........................2111.00101000
.........................................................................................................................................................................................................................................................................................................CTCGTGAATTGCCAGTTTTGCCCCGT.......................................2611.00101000
..................................................................................................................................................................................................................................................................................................................................................GAATTTATGCCCCTCGAAGAG...2111.00100100
..................................................................................................................................................................................................................................................................................................................TGCCAGTTTTGCCCCGTTCGGAC.................................2311.00101000
...................................................................................................................................................................................................................................................................................................GACAAACTCGTGAATTGCCAG..................................................2111.00101000
.................................................................................................................................................................................................................................................................................................TGGACAAACTCGTGAATTGCCA...................................................2211.00101000
....................................................................................................................................................................................................................................................................................................................................CGGACAGTACATCTGAATTTATG...............2311.00101000
............................................................................................................................................................................................................................................................................................................................GCCCCGTTCGGACAGTACATCT........................2211.00101000
...........................................................................................................................................................................................................................................................................................................CGTGAATTGCCAGTTTTGCCCCGT.......................................2411.00100100
............................................................................................................................................................................................................................................................................................CCACATGGACAAACTCGTGA..........................................................2011.00100100
.......................................................................................................................................................................................................................................................................ATTAACAAAACAGAATTGCGTCCA...........................................................................2411.00100100
......................................................................................................................................................................................................................................................................AATTAACAAAACAGAATTGCGTC.............................................................................2311.00100100
..........................................................................................................................................................................................................................................................................AACAAAACAGAATTGCGTCCAC..........................................................................2211.00100100
............................................................................................................................................................................................................................................................................................................GTGAATTGCCAGTTTTGCC...........................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................ATTTATGCCCCTCGAAGAGAAG2211.00100100
droVir3
AAC----------------------------------------------------------------------------------------------------------------------TG--CAAA------------TG-CAAA--------------------------------------------------------------TGC--------------AA-ATTGGCACCGTCA--ACACCATTTAAATGCCAAATTAACCGAACAGAGTTGCGTCCACATGGACAAACTCGTGAATTGCCAGTGTTGCCACGCTCGGAGAGCACATCGGAATTTATGCCCCTAGAAGAGAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................TGCCACGCTCGGAGAGCACATCGGA......................2512.002001000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................GTGAATTGCCAGTGTTGCCACGCTCGGA..................................2811.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CCACATGGACAAACTCGTGAATTGCCAGT.................................................2911.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................ATTTATGCCCCTAGAAGAGAA.2111.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCACGCTCGGAGAGCACATCGGA......................2311.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCCACGCTCGGAGAGCACATCGGAAT....................2711.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CAAACTCGTGAATTGCCA...................................................1811.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
ATTC------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC--------------AA-ATCGGCAACGTCA--ACACCATTCAAATACCAAATTAACCGAACAGAGTTGCGTCCTCATGGACAAACTCGTGAATTGCCAGTGTTGCCGCGCTCGGATAGCACATCGGAATTCATGCCAATGGCGGAGAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................TGCGTCCTCATGGACAAACTCGTGA..........................................................2511.001100000
.............................................................................................................................................................................................................................................................................................CTCATGGACAAACTCGTGAATTGCCAGT.................................................2811.001000001
.............................................................................................................................................................................................................................................................................................................................................CATCGGAATTCATGCCAATGGC.......2211.001000010
...................................................................................................................................................................................................................................................................................................................................................AATTCATGCCAATGGCGGA....1911.001100000
droGri2
C---------------------------------------------GCAACTGCAACCGC-------------------CATTGCAACACCT-TTTCTTGC-----------------AACTG--CAAATGCAAATACAAATACAACGGTTAATGCC---------ATTAA------------------------------------------ACGTGCAACGCCATTAAATCGCCAACGTCA--ACACTATCAAAATGTTAAACTAACTGAACAGAGTTGCGCCCGCATGGACAAACTCGTGAATTACCAGTGTTGCCACGTTCGGATAGCACCGCGGAGTTCATGCCGCTCGAGGAGAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................CGCATGGACAAACTCGTGAATTACCAG..................................................2711.00101

Generated: 05/18/2015 at 10:02 AM