ID:

dsi_8536

 Coordinate:

x:15310576-15310725 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.2 -8.0

Flybase annnotation

CDS [x_15310561_15310575_+]; five_prime_UTR [x_15310498_15310560_+]; exon [x_15310498_15310575_+]; intron [x_15310576_15311445_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGATTTTATGGTGGTAAATAGAGCGAGAAAATCTAGAAGCCAAGCGCGTTTTCAATTCGGCAATACGTTTTGAGCTAAATACCCCGAAAAGTCTGCTGAGCGAACGGTTTGTGGAATCCAAAAACCAAATGTGTGTGCATACATATGTACGATTGTAATGTGTTATTGTTGCTCCCCGAAATATCGAAACACTTACATACCTACATAGACAAA
*******************************************************************************************.(((((((..((.(((((............))))).)).))))))).........******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR1275483
Male prepupae		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.............................................................................................................................AAGTCTGCTGAGCGAACGGTT........................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GGGTCTGCTGAGCGAACGGTT........................................................................................................ 21 2 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................ATTCGGCAATACGTTTTGAGC.......................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................TGAGCGAACGGTTTGTGGAAT................................................................................................ 21 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................AAGTCTGCTGAGCGAACGG.......................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAGTCTGCTGAGCGAACGGTTT....................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAGAGCGAGAAAATCTAGAAGCT............................................................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................TATGGTGGTAAATAGAGCGAG.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TAATGTGTTATTGTTGCT........................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................GGGTCTGCTGAGCGAACGGT......................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAAGTCTGCTGAGCGAAC............................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................GGTCTGCTGAGCGAACGGTTT....................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................GCTTATGGATTTTATGGTGC....................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................AGCGAGAAAATCTAGAAGCCA........................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................AGCGCGTTTTCAATTCGGCAA...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCGAAAAGTCTGCTGAGCGAACGCC......................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGCTGAGCGAACGGTTTGTGG................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................ATGGTGGTGGATAGAGCGAGA......................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GTCTGCTGAGCGAACGGTTTGTGGA.................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................TGCATACATATGTGCGATTGT......................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGAGCTAAATACCCCGAAA............................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................TATGGATTTTATGGTGGTAAT................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................TATGGATTTTATGGTGGTAA.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CATTTGTAGGATTGTAGTGTG................................................... 21 3 2 1.00 2 0 0 0 0 0 0 0 0 0 0 1 1
...................................................................................................................................GCTGAGCGAACGGTTTGTGGA.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGCTGAGCGAACGGTTTGT..................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................TTATGGATTTTATGGTGGTAA.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATACATATGTACGATTGTAATG..................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAAGTCTGCTGAGCGAACGGT......................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAGTCTGCTGAGCGAACGGT......................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CTGAGCGAACGGTTTGTGGAA................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AAAGTCTGCTGAGCGAACGGT......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................TATGGTGGTAAATAGAGCGTA.......................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AAAGTCTGCTGAGCGAACGGTT........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TGACGCTTATGGATTTTATGGTGCCGA.................................................................................................................................................................................................... 27 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TGCTGAGCGAGCGGTTTGTGG................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGCTGAGCGAACGGTTTGTG.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAAATAGAGCGAGA......................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GTCTGAATACATAGGTACGA............................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................ATGGATTTTATGGTGGTATT................................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CATTTGTAGGATTGTAGTGT.................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................AACGGTTGGTGGAATAC.............................................................................................. 17 2 16 0.13 2 0 0 0 0 0 0 0 0 0 0 2 0
..............................................GGTGGTAAATAGAGT............................................................................................................................................................................................. 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CTACATATGGACGGTTGTA........................................................ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGAGGAATCCAAAAA......................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTAAACGTTTAGAAACAAATATTATCGACTGCGAATACCTAAAATACCACCATTTATCTCGCTCTTTTAGATCTTCGGTTCGCGCAAAAGTTAAGCCGTTATGCAAAACTCGATTTATGGGGCTTTTCAGACGACTCGCTTGCCAAACACCTTAGGTTTTTGGTTTACACACACGTATGTATACATGCTAACATTACACAATAACAACGAGGGGCTTTATAGCTTTGTGAATGTATGGATGTATCTGTTT
********************************************************************************************************.(((((((..((.(((((............))))).)).))))))).........******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 O001
Testis
 O002
Head
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................GGCTTTTCAGACGACTCGCTT............................................................................................................. 21 0 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0
.........................................................................................................AAACTCGATTTAGGGG................................................................................................................................. 16 1 4 2.00 8 0 0 4 0 0 4 0 0 0 0 0
.....................................................................GATCTTCGGTTCGCGCGAAA................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................GGTTCGCGCAAAAGTTAAGCC......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTATAGCTTTGTGAATGTA............... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............................................CACCATTTATCTCGCTCTTTTAG.................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................GGGCTTTTCAGACGACTCGCTT............................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................TTATCTCGCTCTTTTAGAT.................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................TGGTTCGCGCAAAAGTTAAGCC......................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TCGCTTGCCAAACACCTTAGG.............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GGGCTTTATAGCTTTGTGAAT.................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGCTTTGTGAATGTATGGATG......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................TCGCTCTTTTAGATCTTCGGT........................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAACGAGGGGCTTTATAGC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GTATACATGCTAACATTACAC................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................AGGGGCTTTATAGCTTTGTGG.................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................GACGACTCGCTTGCCAAACAC.................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................AAACTCGATGTATGGG................................................................................................................................. 16 1 4 0.75 3 0 0 2 0 0 1 0 0 0 0 0
..........................................................................................................AACTCGATTTAGGGG................................................................................................................................. 15 1 8 0.38 3 0 0 0 0 0 3 0 0 0 0 0
..............................................................TCTTTTAGAACTTCGGTT.......................................................................................................................................................................... 18 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACGAGGGGCTTTAC.............................. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................CCAAAACTCGATATAGGGG................................................................................................................................. 19 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................GCCAAACTCGATGTAGGGG................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................AAAACTCGATATAGGGG................................................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTGAATGAATGGATGTA....... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:15310526-15310775 + dsi_8536 CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-TTACATACCTACATAGAC--AA---A
droSec2 scaffold_17:17548-17797 + CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAACGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-TTACATACCCACATAGAC--AA---A
dm3 chrX:16190774-16191023 + CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-AAACATACCTACATAGAC--AA---A
droEre2 scaffold_4690:10896750-10896999 - CATTTGCAAATCTTTGTTTATAATAGCTGACTCTTATGGAT-----TTTATGGTGGTAAATACAGCGA-GAAAATCTAAAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTAT---TGAGCTAAATAC---TC-C-GAAAG-TCTGCTGAGCGAACGGTTTGTGGAACCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCCTCGAAATATCG----------AAACAA-GTACATACCAACATATAC--GA---A
droYak3 v2_chrX_random_001:33844-34092 + CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------AGTTT---TGAGCTAAATAC---CC-T-GAAAG-TCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CAAAATATCG----------AAACAT-ATACATACCTACATATAC--GA---A
droEug1 scf7180000409008:1418950-1419212 - CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCAAAGCGCGTTTT-CAATTCGGCAATT-------------CGTTTT--TGAGCTAAACAC---CC-C-GAAAG-GCTGAGGCCCGATCGTTTTGTGGAACCTAAAAAAAAACCAA-AA------T-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTCTT-TGAAATATCG----------AAATAT-ATGCATACTTAGATAAATATAT---T
droBia1 scf7180000302126:814822-815095 - CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCCAGAAGCCAAGCGCGTTTT-CAATACGGCCGTA-------------CGTTTT--CGGGCTAAATACGCCCC-C-GACTC-GCTGCCAACCGAACGTTTTGTGGAACTCAAG------------------CCCTCACAAAAAAAAGAAAAAACAAAAAGT-C-GAAATGTGTGTGC---------------AC------------------------------ATACATATGTAA----------CGATTGTAATGT-GTGTTATTGTTGCTCCT-CGGAATATCG----------GAATAC-ATGCATACG-----------------
droTak1 scf7180000415289:252965-253203 + CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATT-------------CGTTTT--TGAGCTAAATAC---CCGC-GAGAA-GCTGCTGCCCGAACGTTTTGTGGACCTCAAA-----ACCGAAAA---GGCC-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTCCT-CGGAATATCG----------GAATA----------------------------
droEle1 scf7180000491182:88880-89131 - CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTACTAGCAAAGCGCGTTTT-CAATTCGGCATTT-------------CGTCTC--TAAGCTAAACAC---C--T-GAAAA-GCTGCTGCCCAAACGTTTTGTGGACCCCGAA-----------AC------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGATGCTCTT-CG-AATATCG----------GAATAC-GTACATACAGATACATGC--AGATGA
droRho1 scf7180000778073:4721-4968 - CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGTAGCAAAGCGCGTTTT-CAATTCGGCAATT-------------CGTCTT--TAAGCTAAATAC---C--C-GAAAA-GCTGCTGCTCAAACGTTTTGTGGACCCCGAA-----------AC------C-----------------------------C--GAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGATGCTCTT-CG-AATATCG----------GAATAT-GTACATACATGC-TACAC--AT---A
droFic1 scf7180000453495:463869-464110 + CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCCAAGCGCGTTTT-CAATTCGGCTATA-------------CGTTTC--TGAGCTAAATAC---TG-CTAAAAA-GCTG---------CGTTTTGTGGACTCCGAA-----------AA-----CC-----------------------------C--AAATCTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTTCT-CG-AATATCG----------GAATATAGTATATCC--AAATATAT--CT---A
droKik1 scf7180000302696:1031944-1032129 + TATTTGCGAATCTTTGTTTATAATAGCTGACGTTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-G-----TTTGAAGCGAACAGTGTTTT-CGAAACGGAAATAAACGCAAACCAGTCGTT----------------------------------------------TTTGTGGACCT-----------------------------------------------------C--GAATGTGTGTGC-----------------------------------------------ATGCATATGTGA----------CGATTATACTGTGTTGTTATTGTTGCTCTT-CG-----TCG----------C--------------------------------
droAna3 scaffold_13137:1174181-1174387 - TATTTGTCAATCTTTGTTTATAATATTTTTCTCTTTAG----------TATAGTCGAAAATAAAGTTA-AGA-ATATAAAAGAAAAGGGGAATTT-TAATTTCGGACAA-------------CATAA----ATGTTAAATAC---AA-C-AAAAT-TCT--AGAT----------------T------------------------A-----------------------------C--GCGTTAGTTTGC-----------------------------------------------TAACACATGTGA----------AGTTTTATGTT---TCTTATTGTTGCTTCT--AAAATATCG----------GAATAT-GTGCACAA------------AG---C
droBip1 scf7180000393699:57026-57208 + TATTTGTCAATCTTTGTTTATAATATTTGTCGTTTCTT-AT-----TAAATGGTGGAGAAGGAATTTG-AGA-ATGTTGAACTCTTAGCTAATTT-TAATTCCGGAAAA-------------CGAAA---AT-ATTACATGC---AA-C-AA--A-GCTCTTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------T---AGGCATTCGTGTACTC-ACGCATATTA--AAAAATTAGAATAA-GTGCACAA------------AA---C
dp5 XL_group1e:10406059-10406313 - TGTTTTCGAATCTTTGTTTATAATAGCTGACGTTTATGGAT-----TTTACGGTGGTAAATAGAGCAA-GAAAAAGCAGAAACCAAGCGCGTTTT-TAATTCGGCAATA-------------CATTTGAATAGTATATGTACATTC----CA-AA-GACGTTTTACGAAGGTTTTTTTG---------------------TTTGGC----------------------------CAC--AAATGTGTGTGTGTGGTGCGTACATGCAT------------------------------ATACATATGT-----------ACGATTGTTTTG---TGTTATTGTTGCGTT--CGAAATATCG----------GAATAT-GTACATAC------------AA---A
droPer2 scaffold_69:113487-113745 + TATTTGCGAATCTTTGTTTATAATAGCTGACGTTTAAA-TTTAACGTTTACGGTGGTAAATAGAGCAA-GAAAAAGCAGAAACCAAACGCGTTTT-TAATTCGGCAATA-------------CATTTTAATAGTATATGTACATTC----CA-AA-GACGTTTTACGAAGGTTTTTTTG---------------------TTTGGC----------------------------CAC--AAATGTGTGTGTGTGGTGCGTACATGCAT------------------------------ATACATATGT-----------ACGATTGTTTTG---TGTTATTGTTGCGTT--CGAAATATCG----------GAATAT-GTACATAC------------AA---A
droWil2 scf2_1100000004909:6543219-6543504 + TATTTGCGGATCTTTGTTTATAATAG-------TTATGGAT-----TTTATGGTGGTAAATAAAGAG-----------CAATCCGTACGCGTTTT-CAATTCGCCAATAAAT----------AGACAT--CAAAAATAATAT---CT-C-GA-AA-GCTGTTATTCCAAGGTTTTCTGGACTA-----------------------------------------------------T--AAATGTGTGTGTACA-TATATATATATATATATACATCCATACATACATATGTACATACATACATATGTAACAACTCGATTCGATTGTTTTT--GTGTTATTGTTGTTTTT--G---TTTCTTAAC------AAACAC-GCACACACACCCAGAGAA--AG---A
droVir3 scaffold_12472:257778-257983 - TATCTGCAAATCTTTGTTTATAATAGCTGACGTTTATGGAG-----TTTATGGTGCTAAATACCG--AAGAAAA-----CAGCAAAACGCGTTTTTTAATTTCATTGCA-------------AGTTGCAGTAAACTAACTAC---A----------CTTGTTATCTAAAGGTGTTCA----------------------------T----------------------------CATAGTAATGTATGTAT-----------------------------------------------GGT----TGT-----------ATGTTTGTTTTG--GTG---TTTTTGTTTT--AAAAATGTTG----------AAGAAT-C------------------------A
droMoj3 scaffold_6473:13079152-13079177 + AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT-TTACATACATGCATATGC--AC---A
droGri2 scaffold_15203:4726689-4726919 + TATTTGCAAATCTTTGTTTATAATAGCTGACGTTTATGGAG-----TTTATGGTGCTCAAAA--ACGAAGAAAA-----GAACAAAACGCGTTTTTCTATTTCGTTGCA-------------AATCGCAGTAATCTAGCTGC------------A-CTTGTTATTTTGAGGTTTTCTAG---------------------C-----T-----------------------------TAGTAATGTATGTAT-----------------------------------------------GTTTATA---------------GGTTTGTTTTG--GTGTTATTGTT---TCA--TAAATATTT--AGG-----AATCAT-ACCTATGTCTGTGTAGACATAC---A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-TTACATACCTACATAGAC--AA---ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................AAGTCTGCTGAGCGAACGGTT......................................................................................................................................................................................................................................2113.00300000000000003000
..................................................................................................ATTCGGCAATA-------------CGTTT---TGAGC.............................................................................................................................................................................................................................................................................2112.00211000000000000000
.................................................................................................................................................................TGAGCGAACGGTTTGTGGAAT..............................................................................................................................................................................................................................2112.00200000001000001000
.........................................................................................................................................................AAGTCTGCTGAGCGAACGG........................................................................................................................................................................................................................................1912.00200000000000002000
.........................................................................................................................................................AAGTCTGCTGAGCGAACGGTTT.....................................................................................................................................................................................................................................2212.00200000000000002000
............................................................TAGAGCGA-GAAAATCTAGAAGCT................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
................................................TATGGTGGTAAATAGAGCGA-G..............................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................TAATG---TGTTATTGTTGCT.........................................................1811.00110000000000000000
.......................................................................................................................................................AAAAGTCTGCTGAGCGAAC..........................................................................................................................................................................................................................................1911.00100000010000000000
...............................GCTTATGGAT-----TTTATGGTGC............................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...............................................................AGCGA-GAAAATCTAGAAGCCA...............................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................................................................................AGCGCGTTTT-CAATTCGGCAA.........................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..................................................................................................................................................C-C-GAAAAGTCTGCTGAGCGAACGCC.......................................................................................................................................................................................................................................2511.00100000000001000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGG.................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................................GTCTGCTGAGCGAACGGTTTGTGGA................................................................................................................................................................................................................................2511.00100010000000000000
..............................................................................................................................T---TGAGCTAAATAC---CC-C-GAAA..........................................................................................................................................................................................................................................................2011.00100001000000000000
..................................TATGGAT-----TTTATGGTGGTAAT........................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..................................TATGGAT-----TTTATGGTGGTAA.........................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...............................................................................................................................................................GCTGAGCGAACGGTTTGTGGA................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................CTGCTGAGCGAACGGTTTGT...................................................................................................................................................................................................................................2011.00100000000000001000
.................................TTATGGAT-----TTTATGGTGGTAA.........................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..........................................................................................................................................................................................................................................................................................................ATACATATGT-----------ACGATTGTAATG---......................................................................2211.00101000000000000000
.......................................................................................................................................................AAAAGTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................2211.00100000000000001000
.........................................................................................................................................................AAGTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................2011.00100000000000001000
................................................................................................................................................................CTGAGCGAACGGTTTGTGGAA...............................................................................................................................................................................................................................2111.00100000000001000000
........................................................................................................................................................AAAGTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................2111.00100000000000001000
................................................TATGGTGGTAAATAGAGCGT-A..............................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................AAAGTCTGCTGAGCGAACGGTT......................................................................................................................................................................................................................................2211.00100000000000001000
.............................................................................................................................................................CTGCTGAGCGAACGGTTTGTG..................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................TGGTAAATAGAGCGA-GA.............................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
...................................ATGGAT-----TTTATGGTGGTATT........................................................................................................................................................................................................................................................................................................................................................2040.25100000000000001000
...................................................GGTGGTAAATAGAGT..................................................................................................................................................................................................................................................................................................................................................1580.13100000000001000000
droSec2
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAACGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-TTACATACCCACATAGAC--AA---ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CTGACGCTTATGGAT-----TTTATGGTGGT...........................................................................................................................................................................................................................................................................................................................................................2611.0010001
................................................TATGGTGGTAAATAGAGCGA-G..............................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................TACATATGT-----------ACGATTGTAATG---......................................................................2111.0011000
.......................................................................AAATCTAGAAGCCAAGCGCGT........................................................................................................................................................................................................................................................................................................................2111.0010100
.........................................................................................................................................................AAGTCTGCTGAACGAACGCCG......................................................................................................................................................................................................................................2130.3310100
dm3
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTTT---TGAGCTAAATAC---CC-C-GAAAAGTCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CGAAATATCG----------AAACAC-AAACATACCTACATAGAC--AA---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................GTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001100000000000000000000000000000000000
..................................................................................................................................................................GAGCGAACGGTTTGTGGAATCCA...........................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GCTGAGCGAACGGTTTGTGGAATCCAA..........................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAATCTAGAAGCCAAGCGCGTTT......................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
..................................................................GA-GAAAATCTAGAAGCCAAGCGCG.........................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TATGGAT-----TTTATGGTGGTAAATAGAGC..................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................AGAGCGA-GAAAATCTAGAAGCC................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATAGCTGACGCTTATGGAT-----T.....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C-C-GAAAAGTCTGCTGAGCGAG...........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................T-----TTTATGGTGGTAAATAGAGC..................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000
...........................................................................................................................................................GTCTGCTGAGCGAACGGTT......................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000
............................GACGCTTATGGAT-----TTTATGGT..............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTGTTGCTCCC-CGAAATATCG----------A................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGGAATCCAA..........................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGTCTGCTGAGCGAACGGTTTG....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTGACGCTTATGGAT-----TTTATG................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................................................A-------------CGTTT---TGAGCTAAATAC---CC-................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................CTGAGCGAACGGTTTGTG..................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GCGTTTT-CAATTCGGCAATA-------------CG........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGG.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................AAATCTAGAAGCCAAGCGCGT........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GAGCGAACGGTTTGTGGAATCC............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................TT---TGAGCTAAATAC---CC-C-GAA...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................GAAAAGTCTGCTGAGCGAACG.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................AGAGCGA-GAAAATCTAGAA...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................TAGAAGCCAAGCGCGTTTT-CAATTCGG............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TTGCTCCC-CGAAATATCG----------AA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................AATTCGGCAATA-------------CGTTT---TGAGCT............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTT-CAATTCGGCAATA-------------CGTTT---..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TAAATAGAGCGA-GAAAATCTAGAAGC.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................GTTTT-CAATTCGGCAATA-------------CG........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGCTTATGGAT-----TTTATGGTG.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGCTTATGGAT-----TTTATGGTGA............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................TGACGCTTATGGAT-----TTTATGGTGGT...........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................AAAAGTCTGCTGAGCGAACGG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................CC-C-GAAAAGTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................C-GAAAAGTCTGCTGAGCGAAC..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATGGAT-----TTTATGGTGGTAAAT.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGT-----------ACGATTGTAATG---TGTTATTGTTGC..........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGGAATCCAAA-----------..............................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGCAAATCTTTGTTTATAATAGCT........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CTGCTGAGCGAACGGTTTGTGGA................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTGTTTATAATAGCTGACGCTT.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAT-----TTTATGGTGGTAAATAGAGCGA-GA.............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TGGTGGTAAATAGAGCGA-G..............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGGAATC.............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCGGCAATA-------------CGTTT---TGAGCTAAAT........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CTGAGCGAACGGTTTGTGGAA...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CC-C-GAAAAGTCTGCTGAG...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TG---TGTTATTGTTGCTCCC-CGA..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................C---CC-C-GAAAAGTCTGCTGAGCGAA...........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................TTTT-CAATTCGGCAATA-------------CGTT......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTGTTTATAATAGCTGACG....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TATCG----------AAACAC-AAACATAC..................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................C-GAAAAGTCTGCTGAGCGAACG.........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ATGGTGGTAAATAGAGCGA-G..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CGA-GAAAATCTAGAAGCCAAGC............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AGCGAACGGTTTGTGGAATC.............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................TGGTGGTAAATAGAGCGA-GAA............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTATGGAT-----TTTATGGTGGTAAATAGA....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................A-------------CGTTT---TGAGCTAAATAC---CC-C-GA............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGGAT-----TTTATGGTGGTAAATAGAGCG.................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C-C-GAAAAGTCTGCTGAGCGAACGG........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AAAAGTCTGCTGAGCGAACGGT.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTG....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................AAAATCTAGAAGCCAAGCGCG.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TGCTGAGCGAACGGTTTGTGGAATCCAAC-----------..............................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C-C-GAAAAGTCTGCTGAGCGAA...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTGTAATG---TGTTATTGTTGCT.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GAGCGAACGGTTTGTGGAAT..............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GAGCGAACGGTTTGTGGAATC.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................CTAGAAGCCAAGCGCGTTTT-C...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................TTT---TGAGCTAAATAC---CC-C-GA............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................GTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGT...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C-C-GAAAAGTCTGCTGAGCGA............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TCG----------AAACAC-AAACATACCT................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AC---CC-C-GAAAAGTCTGCTGAGCG.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................T-CAATTCGGCAATA-------------CGTTT---TGAGC.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................GCTGAGCGAACGGTTTGTGGAA...............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAC---CC-C-GAAAAGTCTGCTGAGC..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GCTGAGCGAACGGTTTGTGGAATCCA...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CGAACGGTTTGTGGAATCCAA..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTTTGTTTATAATAGCTGACG....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ATGGTGGTAAATAGAGCGA-GAAAA..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................TATGGTGGTAAATAGAGCGA-GAAA...........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....TGCAAATCTTTGTTTATAATAGCTT.......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AATAC---CC-C-GAAAAGTCTG....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................AATAC---CC-C-GAAAAGTCTGCTGAGCGAA...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GGTGGTAAATAGAGCGA-GAAAA..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................AATCTAGAAGCCAAGCGCGTT.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................ATCCAAA-----------AA------C-----------------------------C--AAATGTGTGT...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCTGACGCTTATGGAT-----TTTATGGTGG............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................GGTGGTAAATAGAGCGA-GAAAAT.........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................GAGCGAACGGTTTGTGGAATCCAAA-----------A.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CAAGCGCGTTTT-CAATTCGGC...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................C-----------------------------------------------ATACATATGT-----------ACGATTGTAAT..........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............TGTTTATAATAGCTGACGCTTATG..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CTGAGCGAACGGTTTGTGGAATCCAAA-----------A.............................................................................................................................................................................................................2811.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AAAGTCTGCTGAGCGAACGG........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................C---CC-C-GAAAAGTCTGCTGAGCGA............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTAAATAC---CC-C-GAAAAGTCTG....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TTTATGGTGGTAAATAGAGCGA-GAAAA..........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................AATAC---CC-C-GAAAAGTCTGCTG.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
CATTTGCAAATCTTTGTTTATAATAGCTGACTCTTATGGAT-----TTTATGGTGGTAAATACAGCGA-GAAAATCTAAAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------CGTAT---TGAGCTAAATAC---TC-C-GAAAG-TCTGCTGAGCGAACGGTTTGTGGAACCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCCTCGAAATATCG----------AAACAA-GTACATACCAACATATAC--GA---ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................TTATTGTTGCTCCCTCGAAAT...............................................2111.0011000000
................................................TATGGTGGTAAATACAGCGA-...............................................................................................................................................................................................................................................................................................................................................2011.0010000100
...................ATAATAGCTGACTCTTATGGAT-----T.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
......................ATAGCTGACTCTTATGGAT-----TTTATGGT..............................................................................................................................................................................................................................................................................................................................................................2711.0010000010
............................................................................................................................................AC---TC-C-GAAAG-TCTGCTGAGCGAACGCC.......................................................................................................................................................................................................................................2711.0010000100
.............................................................................................TT-CAATTCGGCAATA-------------CGTA......................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................TC-C-GAAAG-TCTGCTGAGCGA............................................................................................................................................................................................................................................2011.0011000000
.................................................................................................................................................................TGAGCGAACGGTTTGTGGAACCC............................................................................................................................................................................................................................2311.0010000100
droYak3
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAATCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATA-------------AGTTT---TGAGCTAAATAC---CC-T-GAAAG-TCTGCTGAGCGAACGGTTTGTGGAATCCAAA-----------AA------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGTTATTGTTGCTCCC-CAAAATATCG----------AAACAT-ATACATACCTACATATAC--GA---ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................TATGGTGGTAAATAGAGC..................................................................................................................................................................................................................................................................................................................................................1812.00220000000000
...........................................................................................................................................TAC---CC-T-GAAAG-TCTGCTGAGC..............................................................................................................................................................................................................................................2112.00200000020000
.......................................................GTAAATAGAGCGA-GAAAATCTAGA....................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................AGCCAAGCGCGTTTT-CAATTCGGC...........................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................C-----------------------------------------------ATACATATGT-----------ACGATTGTAATG---TGT...................................................................2611.00100100000000
...............................................TTATGGTGGTAAATAGAGCGA-GAAAAT.........................................................................................................................................................................................................................................................................................................................................2711.00100010000000
...............................................TTATGGTGGTAAATAGAGCGA-GAAAATCT.......................................................................................................................................................................................................................................................................................................................................2911.00100000010000
......................................................................................................................................CTAAATAC---CC-T-GAAAG-TCT.....................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................CTAAATAC---CC-T-GAAAG-TCTG....................................................................................................................................................................................................................................................2011.00101000000000
droEug1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCAAAGCGCGTTTT-CAATTCGGCAATT-------------CGTTTT--TGAGCTAAACAC---CC-C-GAAAG-GCTGAGGCCCGATCGTTTTGTGGAACCTAAAAAAAAACCAA-AA------T-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTCTT-TGAAATATCG----------AAATAT-ATGCATACTTAGATAAATATAT---TSizeHit CountTotal NormTotal
No Reads
droBia1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCCAGAAGCCAAGCGCGTTTT-CAATACGGCCGTA-------------CGTTTT--CGGGCTAAATACGCCCC-C-GACTC-GCTGCCAACCGAACGTTTTGTGGAACTCAAG------------------CCCTCACAAAAAAAAGAAAAAACAAAAAGT-C-GAAATGTGTGTGC---------------AC------------------------------ATACATATGTAA----------CGATTGTAATGT-GTGTTATTGTTGCTCCT-CGGAATATCG----------GAATAC-ATGCATACG-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCCAAGCGCGTTTT-CAATTCGGCAATT-------------CGTTTT--TGAGCTAAATAC---CCGC-GAGAA-GCTGCTGCCCGAACGTTTTGTGGACCTCAAA-----ACCGAAAA---GGCC-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTCCT-CGGAATATCG----------GAATA----------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTACTAGCAAAGCGCGTTTT-CAATTCGGCATTT-------------CGTCTC--TAAGCTAAACAC---C--T-GAAAA-GCTGCTGCCCAAACGTTTTGTGGACCCCGAA-----------AC------C-----------------------------C--AAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGATGCTCTT-CG-AATATCG----------GAATAC-GTACATACAGATACATGC--AGATGASizeHit CountTotal NormTotal
No Reads
droRho1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGTAGCAAAGCGCGTTTT-CAATTCGGCAATT-------------CGTCTT--TAAGCTAAATAC---C--C-GAAAA-GCTGCTGCTCAAACGTTTTGTGGACCCCGAA-----------AC------C-----------------------------C--GAATGTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGATGCTCTT-CG-AATATCG----------GAATAT-GTACATACATGC-TACAC--AT---ASizeHit CountTotal NormTotal
No Reads
droFic1
CATTTGCAAATCTTTGTTTATAATAGCTGACGCTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-GAAAAGCTAGAAGCCAAGCGCGTTTT-CAATTCGGCTATA-------------CGTTTC--TGAGCTAAATAC---TG-CTAAAAA-GCTG---------CGTTTTGTGGACTCCGAA-----------AA-----CC-----------------------------C--AAATCTGTGTGC-----------------------------------------------ATACATATGTAA----------CGATTGTAATG---TGTTATTGTTGCTTCT-CG-AATATCG----------GAATATAGTATATCC--AAATATAT--CT---ASizeHit CountTotal NormTotal
No Reads
droKik1
TATTTGCGAATCTTTGTTTATAATAGCTGACGTTTATGGAT-----TTTATGGTGGTAAATAGAGCGA-G-----TTTGAAGCGAACAGTGTTTT-CGAAACGGAAATAAACGCAAACCAGTCGTT----------------------------------------------TTTGTGGACCT-----------------------------------------------------C--GAATGTGTGTGC-----------------------------------------------ATGCATATGTGA----------CGATTATACTGTGTTGTTATTGTTGCTCTT-CG-----TCG----------C--------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATTTGTCAATCTTTGTTTATAATATTTTTCTCTTTAG----------TATAGTCGAAAATAAAGTTA-AGA-ATATAAAAGAAAAGGGGAATTT-TAATTTCGGACAA-------------CATAA----ATGTTAAATAC---AA-C-AAAAT-TCT--AGAT----------------T------------------------A-----------------------------C--GCGTTAGTTTGC-----------------------------------------------TAACACATGTGA----------AGTTTTATGTT---TCTTATTGTTGCTTCT--AAAATATCG----------GAATAT-GTGCACAA------------AG---CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................T------------------------A-----------------------------C--GCGTTAGTTTGC-----------------------------------------------TAACA.....................................................................................................2011.001000001
.................................................................................................................................................................AGAT----------------T------------------------A-----------------------------C--GCGTTAGTTTGC-----------------------------------------------TAACA.....................................................................................................2411.001000001
droBip1
TATTTGTCAATCTTTGTTTATAATATTTGTCGTTTCTT-AT-----TAAATGGTGGAGAAGGAATTTG-AGA-ATGTTGAACTCTTAGCTAATTT-TAATTCCGGAAAA-------------CGAAA---AT-ATTACATGC---AA-C-AA--A-GCTCTTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------T---AGGCATTCGTGTACTC-ACGCATATTA--AAAAATTAGAATAA-GTGCACAA------------AA---CSizeHit CountTotal NormTotal
No Reads
dp5
TGTTTTCGAATCTTTGTTTATAATAGCTGACGTTTATGGAT-----TTTACGGTGGTAAATAGAGCAA-GAAAAAGCAGAAACCAAGCGCGTTTT-TAATTCGGCAATA-------------CATTTGAATAGTATATGTACATTC----CA-AA-GACGTTTTACGAAGGTTTTTTTG---------------------TTTGGC----------------------------CAC--AAATGTGTGTGTGTGGTGCGTACATGCAT------------------------------ATACATATGT-----------ACGATTGTTTTG---TGTTATTGTTGCGTT--CGAAATATCG----------GAATAT-GTACATAC------------AA---ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................CGATTGTTTTG---TGTTATTGTTGC..........................................................2311.0010000001000
...........CTTTGTTTATAATAGCTGA......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.................................................................................................AATTCGGCAATA-------------CATTTGAATAGC..............................................................................................................................................................................................................................................................................2411.0010010000000
..............................................................................................................................................................................................................................................................................................................ATATGT-----------ACGATTGTTTTG---TG....................................................................2011.0010100000000
..................................................................AA-GAAAAAGCAGAAACCAAGCGCG.........................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................AA-GAAAAAGCAGAAACCAAGCGCGTT.......................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
TATTTGCGAATCTTTGTTTATAATAGCTGACGTTTAAA-TTTAACGTTTACGGTGGTAAATAGAGCAA-GAAAAAGCAGAAACCAAACGCGTTTT-TAATTCGGCAATA-------------CATTTTAATAGTATATGTACATTC----CA-AA-GACGTTTTACGAAGGTTTTTTTG---------------------TTTGGC----------------------------CAC--AAATGTGTGTGTGTGGTGCGTACATGCAT------------------------------ATACATATGT-----------ACGATTGTTTTG---TGTTATTGTTGCGTT--CGAAATATCG----------GAATAT-GTACATAC------------AA---ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................TGCGTT--CGAAATATCG----------GA...............................1812.002200000
..........................................................................................GTTTT-TAATTCGGCAATA-------------C.........................................................................................................................................................................................................................................................................................1911.001100000
...............................................TTACGGTGGTAAATAGAGC..................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................ATCG----------GAATAT-GTACATAC------------A.....1911.001100000
.......................................................GTAAATAGAGCAA-GAAAAAG........................................................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
TATTTGCGGATCTTTGTTTATAATAG-------TTATGGAT-----TTTATGGTGGTAAATAAAGAG-----------CAATCCGTACGCGTTTT-CAATTCGCCAATAAAT----------AGACAT--CAAAAATAATAT---CT-C-GA-AA-GCTGTTATTCCAAGGTTTTCTGGACTA-----------------------------------------------------T--AAATGTGTGTGTACA-TATATATATATATATATACATCCATACATACATATGTACATACATACATATGTAACAACTCGATTCGATTGTTTTT--GTGTTATTGTTGTTTTT--G---TTTCTTAAC------AAACAC-GCACACACACCCAGAGAA--AG---ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................T---CT-C-GA-AA-GCTGTTATTCCAAG..........................................................................................................................................................................................................................................2211.00100100
.............................................................................................................................................................................TTCTGGACTA-----------------------------------------------------T--AAATGTGTGTGTA........................................................................................................................................................2411.00100001
...................................................................................................................................................................................................................................................................................TCCATACATACATATGTACATACATAC......................................................................................................2760.17101000
...............................................................................................................................................................................................................................................................................TACATCCATACATACATATGTACATACA.........................................................................................................28200.05101000
.......................................................................................................................................................................................................................................................................................TACATACATATGTACATACATACA.....................................................................................................24200.05101000
droVir3
TATCTGCAAATCTTTGTTTATAATAGCTGACGTTTATGGAG-----TTTATGGTGCTAAATACCG--AAGAAAA-----CAGCAAAACGCGTTTTTTAATTTCATTGCA-------------AGTTGCAGTAAACTAACTAC---A----------CTTGTTATCTAAAGGTGTTCA----------------------------T----------------------------CATAGTAATGTATGTAT-----------------------------------------------GGT----TGT-----------ATGTTTGTTTTG--GTG---TTTTTGTTTT--AAAAATGTTG----------AAGAAT-C------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................G-----TTTATGGTGCTAAATACCG--AAGAA............................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AACTAC---A----------CTTGTTATCTAAA...........................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
......................................................................AAAA-----CAGCAAAACGCGTTTTT....................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................TAATAGCTGACGTTTATGGAG-----TTTATC................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................ATCTAAAGGTGTTCA----------------------------T----------------------------CATAGTAATT................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
...................................ATGGAG-----TTTATGGTGCTAAA........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
...........................................................ATACCG--AAGAAAA-----CAGCAAAACGCGTT.......................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGTTTGTTTTG--GTG---TTTT.............................................................1820.501000000000000000000000000000000010000000000000000000000000000000
droMoj3
AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT-TTACATACATGCATATGC--AC---ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TATTTGCAAATCTTTGTTTATAATAGCTGACGTTTATGGAG-----TTTATGGTGCTCAAAA--ACGAAGAAAA-----GAACAAAACGCGTTTTTCTATTTCGTTGCA-------------AATCGCAGTAATCTAGCTGC------------A-CTTGTTATTTTGAGGTTTTCTAG---------------------C-----T-----------------------------TAGTAATGTATGTAT-----------------------------------------------GTTTATA---------------GGTTTGTTTTG--GTGTTATTGTT---TCA--TAAATATTT--AGG-----AATCAT-ACCTATGTCTGTGTAGACATAC---ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:24 PM