ID:

dsi_8517

 Coordinate:

4:843618-843767 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.1 -7.9

Flybase annnotation

CDS [4_843768_843846_-]; exon [4_843768_843846_-]; intron [4_843150_843767_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACTGAACAGTTGATTGAAGCAATTAACAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGATTAAATAAAGTAAAGGATCGATAAATAAAATGTAAATAGGTACAATAAAAAGTTACTTACAAAAAACAAACGTTTAAACAAAACCCCGCAAAGGTACATATACAAAATTTCTGTTTTTAAAAGATATCTAGAAAGTAAGGTAATTGATATTGGATATAATATGTCGCAAAACTCAAACTTAGCCA
**************************************************((((((......(((((.............)))))..........((((......))))..........)))))).(((((((...((((..........((.....))..........))))...))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902008
ovaries
 SRR902009
testis
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.......................TAACAGTGGCGACTTTGATGGATAA.......................................................................................................................................................................................................... 25 1 1 3.00 3 0 0 0 0 1 2 0 0 0 0
............................GTGGCGACTTTGATGGATAC.......................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.CTGAACAGTTGATTGAAGCAATTAAC............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................TTAACAGTGGCGACTTTGATGGATAC.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................ATGTCGCAAAACTCAAACTTAGCC. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................AATTAACAGTGGCGACTTT................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................TTAACAGTGGCGACTTTGATGGATACACCAAAA................................................................................................................................................................................................... 33 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTCGCAAAACTCAAACTTAGCC. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................CAGTGGCGACTTTGATGGATACA......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................AATTAACAGTGGCGACTTTGATGGA............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................TAAATAAAATGTAAATAGGTA............................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............TGAAGCAATTAACAGTGGCGAC...................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...GAACAGTTGATCGAAGC...................................................................................................................................................................................................................................... 17 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
..................GCAATAAACAGTGGCGCC...................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTCGCAAGACTGAAACT...... 17 2 10 0.20 2 0 0 0 0 0 0 0 1 1 0
..AGAACAGTTGATCGAAGC...................................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0
......................TTTACAGTGGAGAGTTTGAT................................................................................................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................GTCGCAAGGCTGAAACTTA.... 19 3 16 0.06 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................ATAATATGTCTCAAA............... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGACTTGTCAACTAACTTCGTTAATTGTCACCGCTGAAACTACCTATGTGCATTCAGTTTTCACTAATTTATTTCATTTCCTAGCTATTTATTTTACATTTATCCATGTTATTTTTCAATGAATGTTTTTTGTTTGCAAATTTGTTTTGGGGCGTTTCCATGTATATGTTTTAAAGACAAAAATTTTCTATAGATCTTTCATTCCATTAACTATAACCTATATTATACAGCGTTTTGAGTTTGAATCGGT
**************************************************((((((......(((((.............)))))..........((((......))))..........)))))).(((((((...((((..........((.....))..........))))...))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M023
head
........................................................................TTGATTTCCTAGCTAT.................................................................................................................................................................. 16 1 1 2.00 2 1 0 1 0 0 0 0
.........................................................................TGATTTCCTAGCTAT.................................................................................................................................................................. 15 1 3 1.33 4 1 2 1 0 0 0 0
..................................................................................................................................................................................AAAAATTTTCTATAGGTCTT.................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
.................CAGTTAATTGTCACCGCTGAAA................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................TATCCAGGTTTTTTTTAAATGAA............................................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0
.........................................................................TCAGTTCCTAGCTATTGACTT............................................................................................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GTTTTGAGTTTGAAT.... 15 0 5 0.20 1 0 0 0 0 0 1 0
.........................................................................TCATTTCCTTGCTAT.................................................................................................................................................................. 15 1 9 0.11 1 1 0 0 0 0 0 0
...................................................................TTCATTTCATTGCCGAGCTA................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 1 0
............................................................................................................................................................................AAAGGCAAAAATTTTCCAT........................................................... 19 2 12 0.08 1 0 0 0 0 0 1 0
.........................................................................TGATTTCCTAGCTATC................................................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0
.......................................................................CCTGATTTCCTAGCTATT................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:843568-843817 - dsi_8517 ACTGAACAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGATTA----------------------------------------------------------------------------------------------------------AATAAAGTAAA-------------------------GGATCGATAAATAAAATGTAAATAGGTA-------------------------CAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAC-AAACGTTTAAA----------------------CAA----------------------------------------------------------AACCCCGCAAAGGTACA--TAT--------ACAAAATTTCTGTTTTT----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAGGTAATTGATATTGG---------------------------------------------------ATATAA--TATGTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------CA
droSec2 scaffold_40:105037-105307 - ACTGAACAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGATTAAA---------------------------------------------------------------------------------------AAAA--GTACACACATAAATAAAGTAAA-------------------------GGATCGATAAATAAAATGTAAATAGGTA-------------------------CAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAA-AAACGTTTAAA----------------------CAA----------------------------------------------------------AACCCCGCAAAGGTACATACAT--A---T-ACCAAATTTCTGTTTTA----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAGGTAATTGATATTGG---------------------------------------------------ATATAA--TATGTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------CA
dm3 chr4:1058787-1059034 - ACTGAGCAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGAATAAT--------------------------AGAAT--------------------------------------------------------------GTACACACATAAATAAAGTAAA-------------------------GGATCGATAATTAAAATGTAAATACT---------------------TATTTACAATAAAAAGTTACTTAT---------------------------------------------------------------------------------------------AAAAAAAAAAAAGTTAAAT----------------------CAA----------------------------------------------------------AACTCCCCAAAGGTACA--AAT--------A-AAAATTTCTGTTTCA----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAACTA----------------------------------------------------------------------------CTAAAACT--------------------------------------------------------------------AAACTACGT------------------------CA
droEre2 scaffold_4512:208254-208517 + ACTGAGCAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCGATAGTAAATAAT---------------------------------------------------------------------------------------ATAA--GAGAATAAAAATAAGAAGTAGA-------------------------GGATCAACAATTAAACTTTAAATTAAATGGT----------------CAATTATAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAATAAACGTTA---------------------------------------------------------------------------------------------CTATATAATA--AAC--------G-TAAATTTCTGTCT-------------------------------------------------AGACTGT---------------CAA--GTCTAGAAAGTAAGGTAAAAGGATTTTA---------------------------------------------------ATCTAA--TTTGTAGCGAAACT-------------------------------------------------------------------AAAATTGCAC------------------------CA
droYak3 v2_chrX_random_036:56317-56551 + GGGCGATTAT-AATAGAA--GAAACACA----TTGTCGAGCTCATAGAGGA--------------------------------------------------------------------------------------------------------------------------------------------CTAGACGAAAATTACAAACA-------AATCAAT-AGA---------TTATATTATTG----------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------CAAATT--TATTTACCAAATTAAAGGAATACATAAAAATTGTACAATTTGCAACGAAAATAAGTATAACAGA--CATA--CAG--------TTAATATTCCTATTTTA----AC---TA---------A---------------------------------------------------AGAGGGAGAAAATTTGCAC-----------------------------------------------------------------------------------------ATAGATATTTAT-TACG------GGCAAAAC-------------------------------------TTAT------------------------TT
droEug1 scf7180000408689:611-799 - AATATAAATATAAATATA--AATATAAA----TATAAATATAAATATAAAATATAAA---ATATAAAATATAAAAT---------------------------------------------------------------------------------------------------------ATAAA--------------------------------------ATATAAAAT--------------------------------------ATAAAATATAAAATAT---------------------------------------------------------------------------------------------AAAATAT--------AAAA----------------------TAT----------------------------------------------------------AAAATAT---------------------------------------------------------------------------------------AAAATATAAAAGTATAAAATATAAA--ATATAAAATATAAA-----------------------------------------------------------------ATATAA--AATATAAAATATAA---------------------------AATA----------------------------------------TAAAAT------------------------AT
droBia1 scf7180000301495:198543-198780 + GCTAAATAATTAATTAAA--T-AATTGA----CTAAA-TAAC-TAAATAGGTAAATAAATAACTAAA---------------------------------------------------------------------------------------------------------------------AA-------------------------GCTAAATAATTAA--------------TTAAATAATTA----------------------------------------------------------------------------------------------------------------------------------------------------AC----------------------TAAATAACTAAATACCTAAATAAATAAATAGCTAAATAATTAATTA---A----CTAA---ATAACTAAAAAACTAAA--TAACTAAATTGC-TAAATTATTAATT-------------------------------------------------AAA--------------------------------------------------------TAATTAAC-TTAATGTA-----------TC--ATTAAAAACATTTTAGT-----------CGAACAAAT--------------TAT-A----------------------------------------------------TCAGAA------------------------CT
droTak1 scf7180000415263:35450-35691 - ACATATCATTTAAAATT---TAAG-------------------------------CTTGAGTCAT----------------------------------------------------------AACATTTATTAAAATAAAATATTGGTCTAAGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCGCAATGAAAACGAATCAAAGCTCATTTCGGGATTTGAAGTTTAAATTACCGTCGTAAA--TATATTTAA--------AAATATTTTTTATTCCT----AA---AA---------T---------------------------------------------------ATACCAAAAA---TTACAT----GTAAAATTAAATTAT----TTTGCTGAG-----------CGATACTATCG--------ATATT-----GTTCGCAAACCA-------------------------------------------------------------------TAAATTTTACCTAA--------------------AC
droEle1 scf7180000491021:417580-417858 - TTGAAACAAATTTGAAAG--A--CTTGA----GGGTTTA-------------------------------------AATTCAAAAATTTGAAAAACTTATACTTAAAAAAAAACTTGAAAAATG-------------------------------------------------------------------------------------------------TACAAC-AAAATTTGAA-AAAAATTT-----------------------------CAATTTTCTAT---------------------------------------------------------------------------------------------AAATTAT-AAATTTTTCAA----------------------AAA----------------------------------------------------------AATGTTAAAAA-ATCTA--TAT--------TTTAAATTTGT----------AA---AA---------CAGCTTGAAA----------C-TTTGTAAAAA----------------------ATTTAAAAAATGTTGAAATTTGAAAG--------------ACTTGAGGGTTTAAATTCAAAAATTT----------------------------------------------------------------GAAAAAC-------------------------------------TTATTTAAAAAAAAACTTGAAAAATGTACA
droRho1 scf7180000775584:14030-14298 + ACTAGGAGTT-ATGGG-------------------TATA-------------------------------------TAAATAAAAAACAAAAGATTTTAATTTGTATTTAAAACTTGAAAAATGATAGTTATT--------------GTTTGAGTTGTATAAAAAAC--ATAGCTTGATAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGGCGCCGCAAATTATGATTATTGCTTTTTGAATAAA-AAATAATTC-A----------------------CTA----------------------------------------------------------ATTCTTATCATTTTATT--TAC--------ATTTAA-TTTTATTTTT----AA---AA---------C---------------------------------------------------TTATTTGTGAAGCC-----------------------------------------------------------------------------------------------------------------------GAAAATAAAACTCCCGATATAATATTTATCAAACTCATAAAATAAAA------------------------CA
droFic1 scf7180000454055:298553-298799 - ATAAATGATTCAGTTT-A--TAAATTAA----AAATGTTTTTTT----------------------------------------------------------TTTATATCTTTTTTTTAAATTATTA------------AA----------------------AA----------------ATTAA-------------------------CATTAAAAAACATTTTTTTTATTAG--------------------------------------------------A---------------------------------------------------------------------------------------------ACTAATA-AAATATGAATATTTATAAATAAATTTTAATAAAAAA----------------------------------------------------------ATTTTTGTAAAAATGTA--TTA----------AAAATTAATA---------------------------------------------A-TTTTTAAAAAATAAAAATTATTAATTT-----------------------------TTA----------------------------TTAACTAATATTAA----------TTATTTATTTTGTTATGAAA-----------------------------AATA----------------------------------------AAAATA------------------------AT
droKik1 scf7180000302469:477371-477632 - TTTCAAAAATTTTAACAA--ATTTTTAA----CTACAAAAAATTTTATATTTTTAAGTTAGTAAAATATTTTTATA---------------------------------------------------------------------------------------TTAAATATGGAAAAATATTTAAACTAAA-------------------------AAAA-AATTATGAAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAACTTATAATTTTATTATATAAAATATGTAAAAATAT-TTAAACTAAATAGGAAT------------------------------TTTTAAATAAATTATGGAAATTTATTAA--------------ACTTTTGAA-----------TTA--------------------------------------------------------------------TAAAATAATAATTTTTAGACAAGAT-CATAAAATTTATTAAATTAAA------------------------AT
droAna3 scaffold_12911:353224-353459 - AAGTAAAAATTGATGAAA--TAAGTA-A----GGTAA-CGAA------------------------------------TGCCATT------------------------------------------------------------------------------TTAAAAATAACATGAAATA---------CTAAAGA-ACAAAATAAACG-------GACAATT-AGA---------AAATAATAATAAGCAGGTTAAAATA----------------------------AATAAAAAATTAAGTGAA----------------------------------AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AA---AA---------T---------------------------------------------------TGATCAAAAAAGTAAGGTAACGAATGCCAT---------------------------------------------------TTTAAA--AATAACTAAAAATTCAAACGAAATAATTTAT-GAAG------AGGCAAATACCC--TCAG-------------------------ATATAG------------------------AA
droBip1 scf7180000396636:1740-1958 - ATAAAAAAAATGACAAAA--AAAAAATA----CCAAAATGTACCAAAAAAA----------------------------------------------------------------------------------------------------------------------ATACTAAAATTTACAAAATAAA------------------AAACCAAAAAAATACAAAAAAAATACAAA-AAAAATAT---------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAATTTTAAAA----------------------AAA----------------------------------------------------------AATACCACAAAAAAATG--ACA--------AAACAAAAAATACCAAA----AA---AA---------A---------------------------------------------------ATATCAAAAAAATACCAAAAAAAAAACCAA---------------------------------------------------AACAAA--TACCTAAAAAAATT---------------------------------------------------------------------------CA------------------------AA
dp5 Unknown_group_24:81430-81529 - ATAAATATAATATAATAA--GAAATTAT----CAATCGAGAGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------AGTAAAC-ATATGTATATA----------------------CTT----------------------------------------------------------ATACATATACTGGGTTA--TTT--------AAAAATTTTTTGTTTTT----AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_6:4266258-4266500 - ATTAAATAAATGCACAAA--AAAA-AGATAAATATTAACAAAAATAACAGGTAAATATAATACAAAAA-----------------------------------------------------------------------------------------------------------------ATAAA-------------------------GCTAAAAATATATTTACAAAATTAAAATAAATATATTAAAAAGATTTAAATA----------------------------AATATATAAAAAAGCAAA----------------------------------GATAAATATGTAACAAAAAATATT------------------------------------------------------------------------------------------------------------------------------------------------------ATTA----------------------------------------------------------------------------------------------------CAAATTTTTCAAAATAAATATG-----------------------------------------------------TTAAAAAATAAAGATAAATATTTAT-ATAA------AACAAAAGATAA--ATAC-------------------------GTAAAA------------------------TA
droWil2 scf2_1100000004513:2851176-2851401 - AAGGATTTGTTGACATGA-ATGATTCAA----AAGTGAATAC---------------------------------A--------------------------TGTATATACGA-------------------------------------------------------------TTCTTAAATTATGCAAA--------------------TG----TGTTAAGCT-ACAGAAGCCTTAACT---------------------TGTAAATAACAATAACAAAATTATTAAATAAATAAAATTGAGAAAAATTATGAAAAAATTAGTTTTATAATAAAAAACCAAAAAAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAATTTGTGAATTA-----------------------------TCAAAGCAAAATCAAA----------------------------------------------------------------------------------------ACAA----------------------------------------CAAAAA------------------------AA
droVir3 scaffold_13324:806047-806249 + ACTCCGTAAGTTCTAATGTAAGGTATAA---ACCACATTGAACGTATAAAA----------------------------------------------------------------------------------------------------------------------T----TTGTTAAATTATATAAA--------------------AC----TATTGATTTATTAATTGTATATA-------------------------------------AATTTCTTAC---------------------------------------------------------------------------------------------TGAAATT-AAATAACCAAA----------------------TAA----------------------------------------------------------ACCACCAAAAA--TACAAACAA--------ATAAAGTTAATAATTTT------------------------------------------------------------------------------AAAAAATAAGGTAAACAAAT-------------------------------------------------------------------------------------------TAT-ATAAGGTACAGGA----------------------------------------AAAATT------------------------AA
droMoj3 scaffold_6473:5266490-5266702 + ATAAAACAGCTATACGAA--AAAAATAT----ATACAAA----------------------TAA-----------A--------------------------AAAATATATAA-------------------------------------------------------------TAAATAAATGGAGTAAA--------------------------TATAAATAAATAAAATATAAATAAATA-------------------------TAAATAAAAAT--------------------------AAT----------------------------------AGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ATCTCAACAAACAAAAATTATGAATAT-----------------------------ACACAATAAAAATAAA---------------------------------------AC------------ATGAAATAAAAATAAAATAATTTAAAGAAA------ATGAATATAAAA--TT-----------------------AAAATTAAATT-----------------------TA
droGri2 scaffold_14822:71739-71797 + ACAGAACAGTTGATTGAG--GCCATCAA----TAGCGGTGACTTCGACGGATATACGTAAGTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTGAACAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGATTA----------------------------------------------------------------------------------------------------------AATAAAGTAAA-------------------------GGATCGATAAATAAAATGTAAATAGGTA-------------------------CAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAC-AAACGTTTAAA----------------------CAA----------------------------------------------------------AACCCCGCAAAGGTACA--TAT--------ACAAAATTTCTGTTTTT----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAGGTAATTGATATTGG---------------------------------------------------ATATAA--TATGTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------CASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................TAA----CAGTGGCGACTTTGATGGATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000000000012000
..................................GTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
.CTGAACAGTTGATTGAA--GCAATTAA----C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
........................TTAA----CAGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------C.2411.00100100000000000000
......................AATTAA----CAGTGGCGACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------C.2211.00100100000000000000
................................CAGTGGCGACTTTGATGGATACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
......................AATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...............................................................................................................................................................................................................................TAAATAAAATGTAAATAGGTA-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..............TGAA--GCAATTAA----CAGTGGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
droSec2
ACTGAACAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGATTAAA---------------------------------------------------------------------------------------AAAA--GTACACACATAAATAAAGTAAA-------------------------GGATCGATAAATAAAATGTAAATAGGTA-------------------------CAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAA-AAACGTTTAAA----------------------CAA----------------------------------------------------------AACCCCGCAAAGGTACATACAT--A---T-ACCAAATTTCTGTTTTA----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAGGTAATTGATATTGG---------------------------------------------------ATATAA--TATGTCGCAAAACT-------------------------------------------------------------------CAAACTTAGC------------------------CASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............TGAA--GCAATTAA----CAGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................CAATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.......................ATTAA----CAGTGGCGACTTTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........TGATTGAA--GCAATTAA----CAGTGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
dm3
ACTGAGCAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCAAAAGTGAATAAT--------------------------AGAAT--------------------------------------------------------------GTACACACATAAATAAAGTAAA-------------------------GGATCGATAATTAAAATGTAAATACT---------------------TATTTACAATAAAAAGTTACTTAT---------------------------------------------------------------------------------------------AAAAAAAAAAAAGTTAAAT----------------------CAA----------------------------------------------------------AACTCCCCAAAGGTACA--AAT--------A-AAAATTTCTGTTTCA----AA---AA---------G---------------------------------------------------ATATCTAGAAAGTAAACTA----------------------------------------------------------------------------CTAAAACT--------------------------------------------------------------------AAACTACGT------------------------CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................TAA----CAGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000113100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.....................CAATTAA----CAGTGGCGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................GCAATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATGGATACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTGAGCAGTTGATTGAA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................TAA----CAGTGGCGACTTTGATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATGGATACACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATGGATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................A----CAGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTGAGCAGTTGATTGAA--GCAATTAA----CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................AATTAA----CAGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTGAGCAGTTGATTGAA--GCAATTAA----C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....GCAGTTGATTGAA--GCAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ATACT---------------------TATTTACAATAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATTAA----CAGTGGCGACTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................CAGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTGATTGAA--GCAATTAA----CAGTGGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............GAA--GCAATTAA----CAGTGGCGACTTTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCAGTTGATTGAA--GCAATTAA----CAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATTGAA--GCAATTAA----CAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAATTAA----CAGTGGCGACTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGGATACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGCAGTTGATTGAA--GCAATTAA----CAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............ATTGAA--GCAATTAA----CAGTGGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CAGTTGATTGAA--GCAATTAA----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...GAGCAGTTGATTGAA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGTGGCGACTTTGATGGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGCAGTTGATTGAA--GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGTGGCGACTTTGATGGATACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGATTGAA--GCAATTAA----CAGTGGCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
ACTGAGCAGTTGATTGAA--GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............GAA--GCAATTAA----CAGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................AGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATTAA----CAGTGGCGACTTTGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.CTGAGCAGTTGATTGAA--GCAATTAA----CAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTGATTGAA--GCAATTAA----CAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................A----CAGTGGCGACTTTGATGGATACACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AA----CAGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAA----CAGTGGCGACTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATTGAA--GCAATTAA----CAGTGGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACA--AAT--------A-AAAATTTCTGTTTCA----AA---AA---------G---------------------------------------------------A.............................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGGATACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................CAGTGGCGACTTTGATGGATACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATTGAA--GCAATTAA----CAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........TGATTGAA--GCAATTAA----CAGTGGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGAATAAT--------------------------AGAAT--------------------------------------------------------------GTACACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTGATTGAA--GCAATTAA----CAGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........GTTGATTGAA--GCAATTAA----CAGTGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............TGAA--GCAATTAA----CAGTGGCGACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................TTTGATGGATACACGTAAGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGCAGTTGATTGAA--GCAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGAAT--------------------------------------------------------------GTACACACATAAATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTGATTGAA--GCAATTAA----CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................CAATTAA----CAGTGGCGACTTTGATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
ACTGAGCAGTTGATTGAA--GCAATTAA----CAGTGGCGACTTTGATGGATACACGTAAGTCGATAGTAAATAAT---------------------------------------------------------------------------------------ATAA--GAGAATAAAAATAAGAAGTAGA-------------------------GGATCAACAATTAAACTTTAAATTAAATGGT----------------CAATTATAATAAAAAGTTACTTAC---------------------------------------------------------------------------------------------AAAAAAATAAACGTTA---------------------------------------------------------------------------------------------CTATATAATA--AAC--------G-TAAATTTCTGTCT-------------------------------------------------AGACTGT---------------CAA--GTCTAGAAAGTAAGGTAAAAGGATTTTA---------------------------------------------------ATCTAA--TTTGTAGCGAAACT-------------------------------------------------------------------AAAATTGCAC------------------------CASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................ATTAA----CAGTGGCGACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........................A----CAGTGGCGACTTTGATGGATACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..........TGATTGAA--GCAATTAA----CAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..............TGAA--GCAATTAA----CAGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..TGAGCAGTTGATTGAA--GCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................AATTAA----CAGTGGCGACTTTGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........................AA----CAGTGGCGACTTTGATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
droYak3
GGGCGATTAT-AATAGAA--GAAACACA----TTGTCGAGCTCATAGAGGA--------------------------------------------------------------------------------------------------------------------------------------------CTAGACGAAAATTACAAACA-------AATCAAT-AGA---------TTATATTATTG----------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------CAAATT--TATTTACCAAATTAAAGGAATACATAAAAATTGTACAATTTGCAACGAAAATAAGTATAACAGA--CATA--CAG--------TTAATATTCCTATTTTA----AC---TA---------A---------------------------------------------------AGAGGGAGAAAATTTGCAC-----------------------------------------------------------------------------------------ATAGATATTTAT-TACG------GGCAAAAC-------------------------------------TTAT------------------------TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................AA--GAAACACA----TTGTCGAGCTCATAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.35705000020000
.........T-AATAGAA--GAAACACA----TTGTCGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10201000010000
.....................AAACACA----TTGTCGAGCTCATAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000000000
..GCGATTAT-AATAGAA--GAAACACA----TTGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
.....................AAACACA----TTGTCGAGCTCATAGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
.............TAGAA--GAAACACA----TTGTCGAGCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
................AA--GAAACACA----TTGTCGAGCTCATAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
.................A--GAAACACA----TTGTCGAGCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
.......TAT-AATAGAA--GAAACACA----TTGTCGAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
................AA--GAAACACA----TTGTCGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
..GCGATTAT-AATAGAA--GAAACACA----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
...............................................................................................................................................................................................................................AT-AGA---------TTATATTATTG----------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------CAAATT--..........................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.........................ACA----TTGTCGAGCTCATAGAGGA--------------------------------------------------------------------------------------------------------------------------------------------CTAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
..GCGATTAT-AATAGAA--GAAACACA----TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
................AA--GAAACACA----TTGTCGAGCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
.....................AAACACA----TTGTCGAGCTCATAGAGGA--------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEug1
AATATAAATATAAATATA--AATATAAA----TATAAATATAAATATAAAATATAAA---ATATAAAATATAAAAT---------------------------------------------------------------------------------------------------------ATAAA--------------------------------------ATATAAAAT--------------------------------------ATAAAATATAAAATAT---------------------------------------------------------------------------------------------AAAATAT--------AAAA----------------------TAT----------------------------------------------------------AAAATAT---------------------------------------------------------------------------------------AAAATATAAAAGTATAAAATATAAA--ATATAAAATATAAA-----------------------------------------------------------------ATATAA--AATATAAAATATAA---------------------------AATA----------------------------------------TAAAAT------------------------ATSizeHit CountTotal NormTotal
No Reads
droBia1
GCTAAATAATTAATTAAA--T-AATTGA----CTAAA-TAAC-TAAATAGGTAAATAAATAACTAAA---------------------------------------------------------------------------------------------------------------------AA-------------------------GCTAAATAATTAA--------------TTAAATAATTA----------------------------------------------------------------------------------------------------------------------------------------------------AC----------------------TAAATAACTAAATACCTAAATAAATAAATAGCTAAATAATTAATTA---A----CTAA---ATAACTAAAAAACTAAA--TAACTAAATTGC-TAAATTATTAATT-------------------------------------------------AAA--------------------------------------------------------TAATTAAC-TTAATGTA-----------TC--ATTAAAAACATTTTAGT-----------CGAACAAAT--------------TAT-A----------------------------------------------------TCAGAA------------------------CTSizeHit CountTotal NormTotal
No Reads
droTak1
ACATATCATTTAAAATT---TAAG-------------------------------CTTGAGTCAT----------------------------------------------------------AACATTTATTAAAATAAAATATTGGTCTAAGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCGCAATGAAAACGAATCAAAGCTCATTTCGGGATTTGAAGTTTAAATTACCGTCGTAAA--TATATTTAA--------AAATATTTTTTATTCCT----AA---AA---------T---------------------------------------------------ATACCAAAAA---TTACAT----GTAAAATTAAATTAT----TTTGCTGAG-----------CGATACTATCG--------ATATT-----GTTCGCAAACCA-------------------------------------------------------------------TAAATTTTACCTAA--------------------ACSizeHit CountTotal NormTotal
No Reads
droEle1
TTGAAACAAATTTGAAAG--A--CTTGA----GGGTTTA-------------------------------------AATTCAAAAATTTGAAAAACTTATACTTAAAAAAAAACTTGAAAAATG-------------------------------------------------------------------------------------------------TACAAC-AAAATTTGAA-AAAAATTT-----------------------------CAATTTTCTAT---------------------------------------------------------------------------------------------AAATTAT-AAATTTTTCAA----------------------AAA----------------------------------------------------------AATGTTAAAAA-ATCTA--TAT--------TTTAAATTTGT----------AA---AA---------CAGCTTGAAA----------C-TTTGTAAAAA----------------------ATTTAAAAAATGTTGAAATTTGAAAG--------------ACTTGAGGGTTTAAATTCAAAAATTT----------------------------------------------------------------GAAAAAC-------------------------------------TTATTTAAAAAAAAACTTGAAAAATGTACASizeHit CountTotal NormTotal
No Reads
droRho1
ACTAGGAGTT-ATGGG-------------------TATA-------------------------------------TAAATAAAAAACAAAAGATTTTAATTTGTATTTAAAACTTGAAAAATGATAGTTATT--------------GTTTGAGTTGTATAAAAAAC--ATAGCTTGATAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGGCGCCGCAAATTATGATTATTGCTTTTTGAATAAA-AAATAATTC-A----------------------CTA----------------------------------------------------------ATTCTTATCATTTTATT--TAC--------ATTTAA-TTTTATTTTT----AA---AA---------C---------------------------------------------------TTATTTGTGAAGCC-----------------------------------------------------------------------------------------------------------------------GAAAATAAAACTCCCGATATAATATTTATCAAACTCATAAAATAAAA------------------------CASizeHit CountTotal NormTotal
No Reads
droFic1
ATAAATGATTCAGTTT-A--TAAATTAA----AAATGTTTTTTT----------------------------------------------------------TTTATATCTTTTTTTTAAATTATTA------------AA----------------------AA----------------ATTAA-------------------------CATTAAAAAACATTTTTTTTATTAG--------------------------------------------------A---------------------------------------------------------------------------------------------ACTAATA-AAATATGAATATTTATAAATAAATTTTAATAAAAAA----------------------------------------------------------ATTTTTGTAAAAATGTA--TTA----------AAAATTAATA---------------------------------------------A-TTTTTAAAAAATAAAAATTATTAATTT-----------------------------TTA----------------------------TTAACTAATATTAA----------TTATTTATTTTGTTATGAAA-----------------------------AATA----------------------------------------AAAATA------------------------ATSizeHit CountTotal NormTotal
No Reads
droKik1
TTTCAAAAATTTTAACAA--ATTTTTAA----CTACAAAAAATTTTATATTTTTAAGTTAGTAAAATATTTTTATA---------------------------------------------------------------------------------------TTAAATATGGAAAAATATTTAAACTAAA-------------------------AAAA-AATTATGAAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAACTTATAATTTTATTATATAAAATATGTAAAAATAT-TTAAACTAAATAGGAAT------------------------------TTTTAAATAAATTATGGAAATTTATTAA--------------ACTTTTGAA-----------TTA--------------------------------------------------------------------TAAAATAATAATTTTTAGACAAGAT-CATAAAATTTATTAAATTAAA------------------------ATSizeHit CountTotal NormTotal
No Reads
droAna3
AAGTAAAAATTGATGAAA--TAAGTA-A----GGTAA-CGAA------------------------------------TGCCATT------------------------------------------------------------------------------TTAAAAATAACATGAAATA---------CTAAAGA-ACAAAATAAACG-------GACAATT-AGA---------AAATAATAATAAGCAGGTTAAAATA----------------------------AATAAAAAATTAAGTGAA----------------------------------AAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AA---AA---------T---------------------------------------------------TGATCAAAAAAGTAAGGTAACGAATGCCAT---------------------------------------------------TTTAAA--AATAACTAAAAATTCAAACGAAATAATTTAT-GAAG------AGGCAAATACCC--TCAG-------------------------ATATAG------------------------AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATAAAAAAAATGACAAAA--AAAAAATA----CCAAAATGTACCAAAAAAA----------------------------------------------------------------------------------------------------------------------ATACTAAAATTTACAAAATAAA------------------AAACCAAAAAAATACAAAAAAAATACAAA-AAAAATAT---------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAATTTTAAAA----------------------AAA----------------------------------------------------------AATACCACAAAAAAATG--ACA--------AAACAAAAAATACCAAA----AA---AA---------A---------------------------------------------------ATATCAAAAAAATACCAAAAAAAAAACCAA---------------------------------------------------AACAAA--TACCTAAAAAAATT---------------------------------------------------------------------------CA------------------------AASizeHit CountTotal NormTotal
No Reads
dp5
ATAAATATAATATAATAA--GAAATTAT----CAATCGAGAGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------AGTAAAC-ATATGTATATA----------------------CTT----------------------------------------------------------ATACATATACTGGGTTA--TTT--------AAAAATTTTTTGTTTTT----AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATTAAATAAATGCACAAA--AAAA-AGATAAATATTAACAAAAATAACAGGTAAATATAATACAAAAA-----------------------------------------------------------------------------------------------------------------ATAAA-------------------------GCTAAAAATATATTTACAAAATTAAAATAAATATATTAAAAAGATTTAAATA----------------------------AATATATAAAAAAGCAAA----------------------------------GATAAATATGTAACAAAAAATATT------------------------------------------------------------------------------------------------------------------------------------------------------ATTA----------------------------------------------------------------------------------------------------CAAATTTTTCAAAATAAATATG-----------------------------------------------------TTAAAAAATAAAGATAAATATTTAT-ATAA------AACAAAAGATAA--ATAC-------------------------GTAAAA------------------------TASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAGGATTTGTTGACATGA-ATGATTCAA----AAGTGAATAC---------------------------------A--------------------------TGTATATACGA-------------------------------------------------------------TTCTTAAATTATGCAAA--------------------TG----TGTTAAGCT-ACAGAAGCCTTAACT---------------------TGTAAATAACAATAACAAAATTATTAAATAAATAAAATTGAGAAAAATTATGAAAAAATTAGTTTTATAATAAAAAACCAAAAAAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAATTTGTGAATTA-----------------------------TCAAAGCAAAATCAAA----------------------------------------------------------------------------------------ACAA----------------------------------------CAAAAA------------------------AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ACTCCGTAAGTTCTAATGTAAGGTATAA---ACCACATTGAACGTATAAAA----------------------------------------------------------------------------------------------------------------------T----TTGTTAAATTATATAAA--------------------AC----TATTGATTTATTAATTGTATATA-------------------------------------AATTTCTTAC---------------------------------------------------------------------------------------------TGAAATT-AAATAACCAAA----------------------TAA----------------------------------------------------------ACCACCAAAAA--TACAAACAA--------ATAAAGTTAATAATTTT------------------------------------------------------------------------------AAAAAATAAGGTAAACAAAT-------------------------------------------------------------------------------------------TAT-ATAAGGTACAGGA----------------------------------------AAAATT------------------------AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAAAT-------------------------------------------------------------------------------------------TAT-ATAAGGTACAGGA----------------------------------------................................2530.672000000000000000000000000002000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GAAATT-AAATAACCAAA----------------------TAA----------------------------------------------------------ACC..................................................................................................................................................................................................................................................................................................................................2350.402002000000000000000000000000000000000000000000000000000000000000
......TAAGTTCTAATGTAAGGTATAA---AAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................GATTTATTAATTGTATATA-------------------------------------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000100000000000000000000000000000000000000000000
droMoj3
ATAAAACAGCTATACGAA--AAAAATAT----ATACAAA----------------------TAA-----------A--------------------------AAAATATATAA-------------------------------------------------------------TAAATAAATGGAGTAAA--------------------------TATAAATAAATAAAATATAAATAAATA-------------------------TAAATAAAAAT--------------------------AAT----------------------------------AGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ATCTCAACAAACAAAAATTATGAATAT-----------------------------ACACAATAAAAATAAA---------------------------------------AC------------ATGAAATAAAAATAAAATAATTTAAAGAAA------ATGAATATAAAA--TT-----------------------AAAATTAAATT-----------------------TASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACAGAACAGTTGATTGAG--GCCATCAA----TAGCGGTGACTTCGACGGATATACGTAAGTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:25 AM