ID:

dsi_8507

 Coordinate:

x:4613721-4613899 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-50.7 -50.6 -50.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGCTGAAAAAGCCGTCTTGGCTTTAAATCAAAACAAGTGCAGCGAAAAAGGCAAGCAAGAAAACCAACAAAACTGCACAGTAAGTTGTGTTACTTCGATCAAGATCAAGGCTTTTTGTCGAAGTGAGTGAGTAGAGTGTGTATGTGTTTGCTTGGTGGCGTGGGTGTGCGTGTTTTTCTTGGCCCTTTGCGAGTGTGTAATTGCATTTGTACATATGTATGTGCATGCATGTGTTGTTTGTGCAATTACAGGAGTGTGTGCAATTACAAATGCCGATCA
**************************************************(((((((((((((((((((((((((((((..........(((((((((.(((((........))))))))))))))..........)))))).)).)))).))))).(((((....)))))...)))))))....)))))..(((((((..(((((........)))))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR902009
testis
 O002
Head
 GSM343915
embryo
..........................................................................................................................................TGTATGTGTTTGCTTGGTGGCGTG..................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...........................TCAAAACAAGTGCAGCGAAAAA...................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................TGGCGTGGGTGTGCGTG........................................................................................................... 17 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................TGCTTGGAGGCGTGGGT.................................................................................................................. 17 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................TGTGTATGTGTTTGCT............................................................................................................................... 16 0 11 0.18 2 2 0 0 0 0
..............................................................................................................................................TGTGTTTGCTTGGTTGCCTG..................................................................................................................... 20 2 7 0.14 1 0 1 0 0 0
.......................................................................................................................................GTGTGTATGTGTTTGC................................................................................................................................ 16 0 11 0.09 1 1 0 0 0 0
...........................................................................................................................TGAGTGAGTAGAGTGAATTT........................................................................................................................................ 20 3 14 0.07 1 0 0 1 0 0
...........................................................................................................................TGAGTGAGTAGAGTGT............................................................................................................................................ 16 0 14 0.07 1 1 0 0 0 0
.....................................................................................................................TCGAAGTGAGTGATT................................................................................................................................................... 15 1 16 0.06 1 1 0 0 0 0
..............................................................................................................................................................................................................................................TGAGCAATAACAGGAGT........................ 17 2 18 0.06 1 1 0 0 0 0
..............................................................................................................................................................................................................TTCGACATATGTATGTGC....................................................... 18 2 20 0.05 1 0 0 0 1 0
...........................................................................................GATTCGATCAAGAGCAAGG......................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GCGACTTTTTCGGCAGAACCGAAATTTAGTTTTGTTCACGTCGCTTTTTCCGTTCGTTCTTTTGGTTGTTTTGACGTGTCATTCAACACAATGAAGCTAGTTCTAGTTCCGAAAAACAGCTTCACTCACTCATCTCACACATACACAAACGAACCACCGCACCCACACGCACAAAAAGAACCGGGAAACGCTCACACATTAACGTAAACATGTATACATACACGTACGTACACAACAAACACGTTAATGTCCTCACACACGTTAATGTTTACGGCTAGT
**************************************************(((((((((((((((((((((((((((((..........(((((((((.(((((........))))))))))))))..........)))))).)).)))).))))).(((((....)))))...)))))))....)))))..(((((((..(((((........)))))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
.............................................TTTTCCGGGCGTTCTTTGGGT..................................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
........TTCGGCAGAAAGGAACTTTA........................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0
.................................................CCGTACATTCTTTAGGTTGTT................................................................................................................................................................................................................. 21 3 6 0.17 1 0 0 1 0
...........................................................................................TGAAGCTAGTTCTCG............................................................................................................................................................................. 15 1 12 0.08 1 0 0 0 1
.....TTATTAGGCAGAATCGAAA............................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:4613671-4613949 - dsi_8507 CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAACAAA--------------------------ACTG---CACAG---------------------------------TA--A------------------GT-TGT----------------------------------------------------------------------------------------------------GTTAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGAAG--------TGAGTGAGTAGAGTG--------T----------G------TATGTGTTTGCTTGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAC------------------------ATAT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCA
droSec2 scaffold_4:1789461-1789750 + CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAAC---------------TGCAAGCAAGAAAAACTG---CACAG---------------------------------TA--A------------------GT-TGT----------------------------------------------------------------------------------------------------GTTAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGAAG--------TGAGTGAGTAGAGTG--------T----------G------TATGTGTTTGCTTGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAC------------------------ATAT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCA
dm3 chrX:4957460-4957761 - CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAAACA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAACAAC--------------------------ACTGT--TACTG---------------------------------TA--A------------------GT-TGT------------------------------------------------------------------------------------------------------TAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGATG--------TGAGTGAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTATGTTTTTGCTTTGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAT------------------------ATTT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCA
droEre2 scaffold_4690:2317206-2317488 - CGTT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AATCAAGTGCAG-----CGAA---AAAG----GCAA-------------GTAAGAAAT--C----------------------------------------------------------------------------------A--A------------------GT-TGTTGT--------------------------------------------------------------------------TGTT-------------------GCTAT-TTCGATCAAGATCAAGGCTTTTC----------------------GTCGAAG--------CGT---------GTG--------T----------G------TGTGTGTGTGTTTGGTGGCGTGGGTGCGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTACGTTTGCTTGTAC-AATGTCCATACATAT-----------GTATGTACATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCA
droYak3 X:3504497-3504796 + CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------ACAAGAAAA--C---CAACAAC--------------------------ACTG---CACAG---------------------------------TA--A------------------GT-TGTTAC--------------------------------------------------------------------------T-TTATT----------------GCTAT-TTCGATCAAGATCAAGGCTTTTT---------------------CGTCGAAG--------TGT---------GAG--------T----------G------TGTGTGTGTGCTCGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-AGCGAGTGT-------------------------GT--AATTGCATTTGTACGTTTGCTTCTATGAATG----TACATAT-----------GTATGTATATGCATGTGCTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCA
droEug1 scf7180000409548:768540-768822 - CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAGTG---CAAA---AAAGAAAAACAA---CAACATGTAAGCAAGAAAA--C---CAACAAC--------------------------AGTG---CATAGT--------------------------------TA--A------------------GT-TA---T--------------------------------------------------------------------------T----------------------GTTGC-TTCGATCAAGATCAAGGCTTTTT----------------------ATTAAT-----------------------G--------T----------G------CTTGTGTGTGTTTGGTGGCGTGGGTGTT-------------------------------------------------------------------------------------GT------------------------TATTGG---TGTGT-TGTTTTCTT------GT------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCAT----AC------------------------ATAT-----------GTATGTACACAAATGTGT---TTTTGCAATTACAT--------GAGTG-TTTGCAA-TTACAAATGCCAATCA
droBia1 scf7180000301760:297442-297796 - CGCCA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CAAAGCCAAAA----GCAA-------------GTAAGAAAACAC---CAACAAC--------------------------ATGG---CACAGC----GG--------------------------TA--A------------------GT-TA---T--------------------------------------------------------------------------TGTT-------------------GTTGT-TCCGATCAAGATCAAGGCTTTCA----------------------GTTTAT-----------------------------------------------------GTGTGTGTTCGATGGCGTGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--------------------GTGTTGTTC--------TTGTTTTTCTA------GG------------------------------CCCTTTTGCGAGTGT-------------------------GT--AATTGCATATGTTC------------------------GTAT-----------GTAAGCGCATGAG---------TGTGCAATTACAT--------GAATG-TGTGCAA-TTACAAATGCCAATCA
droTak1 scf7180000415352:1051130-1051407 + TACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAAGC-CAAAG---CCAAAAGCAG-------GC----GAG--CCAGCAACAAC--------------------------ACTG---CAAAGTTA--------------TATGTAA----GTTTGTA--A------------------GTTTGTTAC--------------------------------------------------------------------------TGTA-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GCCAATG-------------------------------------------------------TGTGTTCGATGGCGTGGGTGTGTGT----------------------------------------------------------------------------------GT--------------------GTATTGTTG--------CTGTTTTTCTT------GG------------------------------CCCTTTTGCGAGTGT-------------------------GT--AATTGCAAACGTAT------------------------GTTTGTA---T----GTATGCAC----C---------------------T--------GTGTA-AGTGCAA-TTACAAATGCCAATCA
droEle1 scf7180000491272:513020-513257 + CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAAA---GCA--------------GCAAGAAAA--T---CAACAAC--------------------------ATTG---CATAG---------------------------------TA--A------------------CT-TGTTAT--------------------------------------------------------------------------TGCT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTAATG--------CAA---------ATG--------T----------A------TTTGTGTGTGTTTGGTGGAGTGGGTGTTTGA----------------------------------------------------------------------------------GT------------------------GGTTA--------T-TTTTTTCTT------GG------------------------------CCCTT-TACGAGTGT-----------------------------------------------------------------------------------------------------------GCAATTGCAA--------GAGTG-TGTGTAA-TTACAAATGCCAATCA
droRho1 scf7180000776532:39676-39922 + CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAA------AG-------------GCAAGAAAA--T---CAACAAC--------------------------ATTG---CCTAG---------------------------------TA--A------------------GT-TGTTAT--------------------------------------------------------------------------TGTT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTTATGCATAAG--TGT---------GTA--TGTATGC----------A------TGTGTGTATGTTTGGTAGCGTGGGTGTCCGT------------------------------------------------------------------------------------------------------------TGTTG--------TTGTTTTTCTT------GG------------------------------CCCTT-TAAGAGTGT-----------------------------------------------------------------------------------------------------------GCAATTGCAA--------GAGTG-TGTGCAA-TTACAAATGACAATCA
droFic1 scf7180000454045:62157-62423 - CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAA----GCAA-------------GCAAGAAAA--CCTACAACAAC--------------------------ATTG---CATGG---------------------------------TA--A------------------CT-TGTTAT-------------------------------------------------------------TGCTAT-------TGTT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTTATT--------TGTGTGTGTTGAG-----------------------------------TTGTTTGGTAGCGTGGGTGTTCGT----------------------------------------------------------------------------------GT------------------------TGTTAT---TGTGTTGCTTTTCTT------GG------------------------------CCCTT-TGCGATCGT-------------------------GT--AATTGCATG---------------------------------------------TG-------------------TGTGCAATTACAT--------GAGTG-TGTACAA-TTACAAATGCCAATCA
droKik1 scf7180000302469:596624-596932 - CACTA-------------AAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAATA-AAACG---GCAACAGCAACA-----------GCA--A---CAACGACAACTGCAACA----------------GCTG---CGC--------------------------------TTGTA--A------------------CT-TGTTAT--------------------------------------------------------------------------TGTTGTTG-------------TC---GTTTCCGATCAAGATCAAGGCTTTTT----------------------GTTAG-G------TGTGT---------ATG--------T----------A------TGTGTGTTTGTTTACCAGCGTGGGTGAGCTT----------------------------------------------------------------------------------GT------------------------TGTTGCTATTAGATTTCTTGTCTTTTAAA-AG------------------------------CCCTT-CGTACGTGTGTGTGTGTGTGTTTGTGTGAGAGAG-----------------------------------------------------------AAGAGT-GGAG---------AGGGTAATTGCAT--------AG--G-TGTGCAA-TTACGAATGCCAAGCA
droAna3 scaffold_13417:320539-320902 - CACTAAAACTTGGCCGCAAAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAA---TAAA----ACAA--------------CAACAAAG--C---TTGCGC---------CAGCTGC-----------ACTATTACAAAAGTATCTATGAATGTAACTACATATGTACAT----A--TG------TAT--------GT----------------------GTGT-ATGT--AGGTACTAGTTTTTCTTC---------TTCT-TGGTTTTAT-------TGTT---GCTGT--------TTC---GT-TTCGATCAAGATCAAGGTTTTCTTTTTTTTTTTTTTTTGTATTTAA-CTA------GGC-TGT---------GGG--------T----------G------TGTGGGTG------------------GGCTT----------------------------------------------------------------------------------GTTGATTTAATTGCCAGGGTTGGTCTTGTTG--------------TTGT-----A-AGCCCTTCGTCTT---T-------------G-CCC---------------------------------------------------------------------------------AT---GTATGCGTGTG--------TG-------------------TGT--------GAGTGTTGTAAAA-TTACAAATGCCAAGCA
droBip1 scf7180000396573:154735-155084 + CACTAAAACTTGGCCGCAAAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAA---AAAA----GCAACAACAA-------------AGG--C---AAACACCAG---------CTGCATT--------ACTATTACAAAAGTATCTA--------------------TGAATGTAAATGTAAATGT---------------------------------------ATGTACAAGTACTAGTTTTTCTTCTTCTCCTTCTTCT-TGTTTTTAT-------TGTT---GCTAT--------TTC---GT-TTTGATCAAGATCAAGGTTTTCTTTTTTT--ATTTTTTGTATTTT--CTG------GGCCTGT---------GGG--------T----------G------TGTGGGTG------------------GGCTT----------------------------------------------------------------------------------GTTGACTTAATTGCCAGGGT------TGTTGT---T----------------GTA-AGCCCTTCGTCTTG-TT-------------------------GGTG------------------------------------------------------------------------------TGCGTGTGT--------G---------------------T--------GTGTGATGTAAAA-TTACAAATGCCAAGCA
dp5 XL_group1e:6724811-6725131 - GACCAGC---TGGCCG-CAAAGTTGTCTTTTGGCTTTAAATCAAAAAACAAGTGCAG-----TAAA---AAGTG---GCAACAGCAACA-----------GCA--A---CAGCAACAA----------------------A-A--G---CAG------CGC--C-----A-TTT--AA---CGGCTGTCATTGTTGATGG--------------------------------------T----GCA-------G---------------------TG-GTTTTCAGCTGCGACG-------------------TTC---GTGTTTGATCAAGATCAAGGCTGC-----------------------------------------AGTGTGTCGTGTGTGTGTCTGT----------------------------------GTGTGGGTGAGCTG----------------------------------------------------------------------------------GT------------------------TGCTGC---C----------------GGACAGCCCTTCATATTAGTTAATGCTCATATTTAGCCAAG-TACCAGTTT-------------------------AT--AAC--CATTTGTGT------------------------GAGT-----------GTGTGTGCAT-----------------------------------ATG-TGTGCTA-TTACAAATGCCAAGCA
droPer2 scaffold_25:60840-61167 - GACCAGC---TGGCCG-CAAAGTTGTCTTTTGGCTTTAAA-----AAACAAGTGCAG-----TAAA---AAATG---GCAACAGCAAC--------------A--G---CAACAAA--------------------------A--G---CAG------CGG--C-----A-TTT--AA---CGGCTGTCAATGTTGATGG--------------------------------------T----GCA-------G---------------------TG-GTTTTCAGCTGCGACG-------------------TTC---GTGTTTGATCAAGATCAAGGCTGC-----------------------------------------AGTGTGTCGTGTG--------T----------G------TGTGTGTGTGTGTGTGTGTGTGGGTGAGCTG----------------------------------------------------------------------------------GT------------------------TGCTGC---C----------------GGACAGCCCTTCATATTAGTTAATGCTCATATTTAGCCAAG-TACCAGTTT-------------------------AT--AAC--CATTTGTTT------------------------GAGT-----------GTGTGTGCA-------------------TGCATAT--------GTATG-TGTGCTA-TTACAAATGCCAAGCA
droWil2 scf2_1100000004909:12370913-12371172 - AACAA------------CAAAGTTGTCT--TGGCTTTAAATCA--AATCAAGTGCAG-----TAAA---TAATA---GCAACAACCACA-----------ACA--G---TAACAACAA-------------------------TTG---TAA---------TCAATGTTAGTATGTATGTATGT----A--TG------TAT--------GT----------------------TTGT-GTGT--GTGGCTCAA---------------------TGTGTTT-------------TT---GCTGTTTGCTACGTTC---AT-TTTGATCAAGATCAAGGTTTTTA----------------------GCCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGTGTTT-------------------------CTTTTCC--AATGTGTGT------------------------GTGT-----------GTGTGTGTAT-------------------ATATGTGTATATGTGAGTG-GGTGAAGCTAACAAATG-------
droGri2 scaffold_14853:4159125-4159386 - CAACAAA---T----GAAAAACTTGTCT--TGGCTGCAAATCA--AATTAATTCAAGTGTAATAAA---TAATA---GCAACAACAAT-------------TG--C---TGTTCGCTGTTGCGCCAGCTCT-----------GTATATGTATAAGTATATATATATATATATACATATA--------TA------AATATATGAGTGTGTGTGTGTGAATGTACATATGTACATGTGT-ATG----------------------------------------------------------------TACTAC----GTTCA-TGCGATCAAGATCAAGGCTTTTT----------------------GCAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-CGAGTATGTGTGTGTGCATGTTTG-------------------------------------------------------------------------------------------------------------------CTG----------TAATGC--AGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAACAAA--------------------------ACTG---CACAG---------------------------------TA--A------------------GT-TGT----------------------------------------------------------------------------------------------------GTTAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGAAG--------TGAGTGAGTAGAGTG--------T----------G------TATGTGTTTGCTTGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAC------------------------ATAT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................T----------G------TATGTGTTTGCTTGGTGGCGTG.............................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
........................................TCA--AAACAAGTGCAG-----CGAA---AAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------G........................................................................................................................................................................................................................1711.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TG--------T----------G------TATGTGTTTGCT.......................................................................................................................................................................................................................................................................................................................................................................16110.18200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTG--------T----------G------TATGTGTTTGC........................................................................................................................................................................................................................................................................................................................................................................16110.09100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGTAGAGTG--------T----------..........................................................................................................................................................................................................................................................................................................................................................................................16140.07100000000001000000
droSec2
CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAAC---------------TGCAAGCAAGAAAAACTG---CACAG---------------------------------TA--A------------------GT-TGT----------------------------------------------------------------------------------------------------GTTAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGAAG--------TGAGTGAGTAGAGTG--------T----------G------TATGTGTTTGCTTGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAC------------------------ATAT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................CGAAG--------TGAGTGAGTAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
dm3
CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAAACA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------GCAAGAAAA--C---CAACAAC--------------------------ACTGT--TACTG---------------------------------TA--A------------------GT-TGT------------------------------------------------------------------------------------------------------TAC-TTCGATCAAGATCAAGGCTTTTT----------------------GTCGATG--------TGAGTGAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTATGTTTTTGCTTTGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTAT------------------------ATTT-----------GTATGTGCATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................AACA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTGCAATTACAG--------GAGTG-TGTG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................AA---AAAG----GCAA-------------GCAAGAAAA--C---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAAACA--AAACAAGTGCAG-----CGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CGATG--------TGAGTGAGTAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTGTGCAATTACAG--------GA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CAA-------------GCAAGAAAA--C---CAACAAC--------------------------ACTGT--TAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAAGCCGTCT--TGGCTTTAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGCTTTAAAACA--AAACAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCTTTGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------G........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................CAA-------------GCAAGAAAA--C---CAACAAC--------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAACAAGTGCAG-----CGAA---AAAG----G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTATATGTATG...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTTTGTGGCGTGGGTGTGC......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGCT-----------GAAAAAGCCGTCT--TGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTACAG--------GAGTG-TGTGC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................TA--A------------------GT-TGT------------------------------------------------------------------------------------------------------TAC-TTCGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AAGTGCAG-----CGAA---AAAG----GCAA-------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A--AAACAAGTGCAG-----CGAA---AAAG----GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AA--C---CAACAAC--------------------------ACTGT--TACTA---------------------------------AT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTGTA.......................................................................................................................................................................................................................................................................................................................................................................................18200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000040000000000000000000000000000
...............GAAAAAGCCGTCT--TGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................19200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGTGTGTGTGTGTGTGTGTG.........................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGTGTGTGTGTGTGTGTGTGTGT........................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGTAGTGTGTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGTGTGTGTGTGTGTGT................................................................................................................................................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
droEre2
CGTT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AATCAAGTGCAG-----CGAA---AAAG----GCAA-------------GTAAGAAAT--C----------------------------------------------------------------------------------A--A------------------GT-TGTTGT--------------------------------------------------------------------------TGTT-------------------GCTAT-TTCGATCAAGATCAAGGCTTTTC----------------------GTCGAAG--------CGT---------GTG--------T----------G------TGTGTGTGTGTTTGGTGGCGTGGGTGCGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCATTTGTACGTTTGCTTGTAC-AATGTCCATACATAT-----------GTATGTACATGCATGTGTTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTTTGGTGGCGTGG............................................................................................................................................................................................................................................................................................................................................................2111.0010000010
droYak3
CGCT-----------GAAAAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CGAA---AAAG----GCAA-------------ACAAGAAAA--C---CAACAAC--------------------------ACTG---CACAG---------------------------------TA--A------------------GT-TGTTAC--------------------------------------------------------------------------T-TTATT----------------GCTAT-TTCGATCAAGATCAAGGCTTTTT---------------------CGTCGAAG--------TGT---------GAG--------T----------G------TGTGTGTGTGCTCGGTGGCGTGGGTGTGCGT---------------------------------------------------------------------------------------------------------------------------GTTTTTCTT------GG------------------------------CCCTT-AGCGAGTGT-------------------------GT--AATTGCATTTGTACGTTTGCTTCTATGAATG----TACATAT-----------GTATGTATATGCATGTGCTGTTTGTGCAATTACAG--------GAGTG-TGTGCAA-TTACAAATGCCGATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAGTG---CAAA---AAAGAAAAACAA---CAACATGTAAGCAAGAAAA--C---CAACAAC--------------------------AGTG---CATAGT--------------------------------TA--A------------------GT-TA---T--------------------------------------------------------------------------T----------------------GTTGC-TTCGATCAAGATCAAGGCTTTTT----------------------ATTAAT-----------------------G--------T----------G------CTTGTGTGTGTTTGGTGGCGTGGGTGTT-------------------------------------------------------------------------------------GT------------------------TATTGG---TGTGT-TGTTTTCTT------GT------------------------------CCCTT-TGCGAGTGT-------------------------GT--AATTGCAT----AC------------------------ATAT-----------GTATGTACACAAATGTGT---TTTTGCAATTACAT--------GAGTG-TTTGCAA-TTACAAATGCCAATCASizeHit CountTotal NormTotal
No Reads
droBia1
CGCCA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----CAAAGCCAAAA----GCAA-------------GTAAGAAAACAC---CAACAAC--------------------------ATGG---CACAGC----GG--------------------------TA--A------------------GT-TA---T--------------------------------------------------------------------------TGTT-------------------GTTGT-TCCGATCAAGATCAAGGCTTTCA----------------------GTTTAT-----------------------------------------------------GTGTGTGTTCGATGGCGTGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--------------------GTGTTGTTC--------TTGTTTTTCTA------GG------------------------------CCCTTTTGCGAGTGT-------------------------GT--AATTGCATATGTTC------------------------GTAT-----------GTAAGCGCATGAG---------TGTGCAATTACAT--------GAATG-TGTGCAA-TTACAAATGCCAATCASizeHit CountTotal NormTotal
No Reads
droTak1
TACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAAGC-CAAAG---CCAAAAGCAG-------GC----GAG--CCAGCAACAAC--------------------------ACTG---CAAAGTTA--------------TATGTAA----GTTTGTA--A------------------GTTTGTTAC--------------------------------------------------------------------------TGTA-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GCCAATG-------------------------------------------------------TGTGTTCGATGGCGTGGGTGTGTGT----------------------------------------------------------------------------------GT--------------------GTATTGTTG--------CTGTTTTTCTT------GG------------------------------CCCTTTTGCGAGTGT-------------------------GT--AATTGCAAACGTAT------------------------GTTTGTA---T----GTATGCAC----C---------------------T--------GTGTA-AGTGCAA-TTACAAATGCCAATCASizeHit CountTotal NormTotal
No Reads
droEle1
CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAAA---GCA--------------GCAAGAAAA--T---CAACAAC--------------------------ATTG---CATAG---------------------------------TA--A------------------CT-TGTTAT--------------------------------------------------------------------------TGCT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTAATG--------CAA---------ATG--------T----------A------TTTGTGTGTGTTTGGTGGAGTGGGTGTTTGA----------------------------------------------------------------------------------GT------------------------GGTTA--------T-TTTTTTCTT------GG------------------------------CCCTT-TACGAGTGT-----------------------------------------------------------------------------------------------------------GCAATTGCAA--------GAGTG-TGTGTAA-TTACAAATGCCAATCASizeHit CountTotal NormTotal
No Reads
droRho1
CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAA------AG-------------GCAAGAAAA--T---CAACAAC--------------------------ATTG---CCTAG---------------------------------TA--A------------------GT-TGTTAT--------------------------------------------------------------------------TGTT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTTATGCATAAG--TGT---------GTA--TGTATGC----------A------TGTGTGTATGTTTGGTAGCGTGGGTGTCCGT------------------------------------------------------------------------------------------------------------TGTTG--------TTGTTTTTCTT------GG------------------------------CCCTT-TAAGAGTGT-----------------------------------------------------------------------------------------------------------GCAATTGCAA--------GAGTG-TGTGCAA-TTACAAATGACAATCASizeHit CountTotal NormTotal
No Reads
droFic1
CACTA-------------AAAGCCGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAA---AAAA----GCAA-------------GCAAGAAAA--CCTACAACAAC--------------------------ATTG---CATGG---------------------------------TA--A------------------CT-TGTTAT-------------------------------------------------------------TGCTAT-------TGTT-------------------GTTGT-TTCGATCAAGATCAAGGCTTTTT----------------------GTTTATT--------TGTGTGTGTTGAG-----------------------------------TTGTTTGGTAGCGTGGGTGTTCGT----------------------------------------------------------------------------------GT------------------------TGTTAT---TGTGTTGCTTTTCTT------GG------------------------------CCCTT-TGCGATCGT-------------------------GT--AATTGCATG---------------------------------------------TG-------------------TGTGCAATTACAT--------GAGTG-TGTACAA-TTACAAATGCCAATCASizeHit CountTotal NormTotal
No Reads
droKik1
CACTA-------------AAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAG-----TAAATA-AAACG---GCAACAGCAACA-----------GCA--A---CAACGACAACTGCAACA----------------GCTG---CGC--------------------------------TTGTA--A------------------CT-TGTTAT--------------------------------------------------------------------------TGTTGTTG-------------TC---GTTTCCGATCAAGATCAAGGCTTTTT----------------------GTTAG-G------TGTGT---------ATG--------T----------A------TGTGTGTTTGTTTACCAGCGTGGGTGAGCTT----------------------------------------------------------------------------------GT------------------------TGTTGCTATTAGATTTCTTGTCTTTTAAA-AG------------------------------CCCTT-CGTACGTGTGTGTGTGTGTGTTTGTGTGAGAGAG-----------------------------------------------------------AAGAGT-GGAG---------AGGGTAATTGCAT--------AG--G-TGTGCAA-TTACGAATGCCAAGCASizeHit CountTotal NormTotal
No Reads
droAna3
CACTAAAACTTGGCCGCAAAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAA---TAAA----ACAA--------------CAACAAAG--C---TTGCGC---------CAGCTGC-----------ACTATTACAAAAGTATCTATGAATGTAACTACATATGTACAT----A--TG------TAT--------GT----------------------GTGT-ATGT--AGGTACTAGTTTTTCTTC---------TTCT-TGGTTTTAT-------TGTT---GCTGT--------TTC---GT-TTCGATCAAGATCAAGGTTTTCTTTTTTTTTTTTTTTTGTATTTAA-CTA------GGC-TGT---------GGG--------T----------G------TGTGGGTG------------------GGCTT----------------------------------------------------------------------------------GTTGATTTAATTGCCAGGGTTGGTCTTGTTG--------------TTGT-----A-AGCCCTTCGTCTT---T-------------G-CCC---------------------------------------------------------------------------------AT---GTATGCGTGTG--------TG-------------------TGT--------GAGTGTTGTAAAA-TTACAAATGCCAAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CACTAAAACTTGGCCGCAAAAGCAGTCT--TGGCTTTAAATCA--AAACAAGTGCAA-----TAAA---AAAA----GCAACAACAA-------------AGG--C---AAACACCAG---------CTGCATT--------ACTATTACAAAAGTATCTA--------------------TGAATGTAAATGTAAATGT---------------------------------------ATGTACAAGTACTAGTTTTTCTTCTTCTCCTTCTTCT-TGTTTTTAT-------TGTT---GCTAT--------TTC---GT-TTTGATCAAGATCAAGGTTTTCTTTTTTT--ATTTTTTGTATTTT--CTG------GGCCTGT---------GGG--------T----------G------TGTGGGTG------------------GGCTT----------------------------------------------------------------------------------GTTGACTTAATTGCCAGGGT------TGTTGT---T----------------GTA-AGCCCTTCGTCTTG-TT-------------------------GGTG------------------------------------------------------------------------------TGCGTGTGT--------G---------------------T--------GTGTGATGTAAAA-TTACAAATGCCAAGCASizeHit CountTotal NormTotal
No Reads
dp5
GACCAGC---TGGCCG-CAAAGTTGTCTTTTGGCTTTAAATCAAAAAACAAGTGCAG-----TAAA---AAGTG---GCAACAGCAACA-----------GCA--A---CAGCAACAA----------------------A-A--G---CAG------CGC--C-----A-TTT--AA---CGGCTGTCATTGTTGATGG--------------------------------------T----GCA-------G---------------------TG-GTTTTCAGCTGCGACG-------------------TTC---GTGTTTGATCAAGATCAAGGCTGC-----------------------------------------AGTGTGTCGTGTGTGTGTCTGT----------------------------------GTGTGGGTGAGCTG----------------------------------------------------------------------------------GT------------------------TGCTGC---C----------------GGACAGCCCTTCATATTAGTTAATGCTCATATTTAGCCAAG-TACCAGTTT-------------------------AT--AAC--CATTTGTGT------------------------GAGT-----------GTGTGTGCAT-----------------------------------ATG-TGTGCTA-TTACAAATGCCAAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................ACAAGTGCAG-----TAAA---AAGTG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GACCAGC---TGGCCG-CAAAGTTGTCTTTTGGCTTTAAA-----AAACAAGTGCAG-----TAAA---AAATG---GCAACAGCAAC--------------A--G---CAACAAA--------------------------A--G---CAG------CGG--C-----A-TTT--AA---CGGCTGTCAATGTTGATGG--------------------------------------T----GCA-------G---------------------TG-GTTTTCAGCTGCGACG-------------------TTC---GTGTTTGATCAAGATCAAGGCTGC-----------------------------------------AGTGTGTCGTGTG--------T----------G------TGTGTGTGTGTGTGTGTGTGTGGGTGAGCTG----------------------------------------------------------------------------------GT------------------------TGCTGC---C----------------GGACAGCCCTTCATATTAGTTAATGCTCATATTTAGCCAAG-TACCAGTTT-------------------------AT--AAC--CATTTGTTT------------------------GAGT-----------GTGTGTGCA-------------------TGCATAT--------GTATG-TGTGCTA-TTACAAATGCCAAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................TCAATGTTGATGG--------------------------------------T----GCA-------G---------------------TG-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................G------TGTGTGTGTGTGTGTGTGTGTGG............................................................................................................................................................................................................................................................................................................................................................24200.051000001
droWil2
AACAA------------CAAAGTTGTCT--TGGCTTTAAATCA--AATCAAGTGCAG-----TAAA---TAATA---GCAACAACCACA-----------ACA--G---TAACAACAA-------------------------TTG---TAA---------TCAATGTTAGTATGTATGTATGT----A--TG------TAT--------GT----------------------TTGT-GTGT--GTGGCTCAA---------------------TGTGTTT-------------TT---GCTGTTTGCTACGTTC---AT-TTTGATCAAGATCAAGGTTTTTA----------------------GCCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGTGTTT-------------------------CTTTTCC--AATGTGTGT------------------------GTGT-----------GTGTGTGTAT-------------------ATATGTGTATATGTGAGTG-GGTGAAGCTAACAAATG-------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droGri2
CAACAAA---T----GAAAAACTTGTCT--TGGCTGCAAATCA--AATTAATTCAAGTGTAATAAA---TAATA---GCAACAACAAT-------------TG--C---TGTTCGCTGTTGCGCCAGCTCT-----------GTATATGTATAAGTATATATATATATATATACATATA--------TA------AATATATGAGTGTGTGTGTGTGAATGTACATATGTACATGTGT-ATG----------------------------------------------------------------TACTAC----GTTCA-TGCGATCAAGATCAAGGCTTTTT----------------------GCAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-CGAGTATGTGTGTGTGCATGTTTG-------------------------------------------------------------------------------------------------------------------CTG----------TAATGC--AGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:39 PM