ID:

dsi_8436

Coordinate:

2l:11524845-11524994 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.1 -31.8 -31.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAACGCATCGAGAAATATAATTGTGTTCAGTTTATTTTGATTTCCTTGAGGTGAGCATAGTGATTTTGGTCTAGATCGGTCGGTGAAATGTCTATAAAAAGCACCTAGTTTTCCACCGATTGGCTTGTCAAGTGCAGAGTGCCGTGAAATTGTGAAAAACAATTTTGTTTACTCATTTAATTTGCACCGCAATTTGTTTTGATTGGAGCTGATAAAAATCTGCCAACAAATTATACCTTTAATACGACTG
**************************************************..........((((...((((..(((((((.((.(((((((((......)).))...)))))))))))))))))).))))...(((((.(((.((((((((((((.(((((....)))))..))))..))))).))).))).)))))...**************************************************
Read size # Mismatch Hit Count Total Norm Total M023
head
SRR618934
dsim w501 ovaries
GSM343915
embryo
M024
male body
SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
SRR553488
RT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
SRR902008
ovaries
.......................................................CATAGTGATTTTGGTCTA................................................................................................................................................................................. 18 0 1 5.00 5 4 0 1 0 0 0 0 0 0 0
................................................AGGTGAGCATAGTGATTT........................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................TCCTTGAGGTGAGCATAGTGATT......................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTTTTGATTGGAGCTGATAAA.................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................................CCTTGAGGTGAGCATAGTGATTTT....................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................AGGTGAGCATAGTGATTTTG...................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................TCCTTGAGGTGAGCATAGTGATTTTG...................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................GTGAGCATAGTGATTTTG...................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................GTGATTTTGGTCTAGATCTGTCGG....................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................GACTAGTGATTTTGCTCTAG................................................................................................................................................................................ 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
................................TATTTTGACTTGCTTGAG........................................................................................................................................................................................................ 18 2 9 0.22 2 0 0 0 0 0 0 2 0 0 0
...........................................................................TCGGTCGGTGAAATG................................................................................................................................................................ 15 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0
...............................................................................TTGGTGAAATGTCTTTAAA........................................................................................................................................................ 19 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................TCAAGTGCAGAGTGG............................................................................................................ 15 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0
................................................................................................................................................................................TTATTTTGCACCGGACTTTGT..................................................... 21 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0
.....................................TGATTTCTTTGAGGT...................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................................................TTGGTCTAGATCGGA.......................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................TAAAATACAATTTTTTTTACTC............................................................................ 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTTGCGTAGCTCTTTATATTAACACAAGTCAAATAAAACTAAAGGAACTCCACTCGTATCACTAAAACCAGATCTAGCCAGCCACTTTACAGATATTTTTCGTGGATCAAAAGGTGGCTAACCGAACAGTTCACGTCTCACGGCACTTTAACACTTTTTGTTAAAACAAATGAGTAAATTAAACGTGGCGTTAAACAAAACTAACCTCGACTATTTTTAGACGGTTGTTTAATATGGAAATTATGCTGAC
**************************************************..........((((...((((..(((((((.((.(((((((((......)).))...)))))))))))))))))).))))...(((((.(((.((((((((((((.(((((....)))))..))))..))))).))).))).)))))...**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
................................................................................................................GGTGGCTAACCGCGCAG......................................................................................................................... 17 2 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:11524795-11525044 + dsi_8436 AAACGCAT-------CGA--GAAATATAATTGTGT--TCAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TCTAGATCGGTC-GGTGA-AATGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGAGTGCCGTGAAATTGTGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGAGC------TGATAAAAATCTG----------------CCAACAA--------------ATT----------------------------ATACCTTTAATACGACTG
droSec2 scaffold_16:53253-53502 + AAACGCAT-------CGA--GAAATATAATTGTGT--TCAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TCTAGATCGGTC-GGTGA-AATGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGTCCAGTGCAGAGTGCCGTGAAATTGTGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGAGC------TGATAAAAATCTG----------------CCAACAA--------------ATT----------------------------ATACCTTTAATACGACTG
dm3 chr2L:11849999-11850238 + AAACGCAT-------CGA--GAATTATAATTGTGT--TCAGTTTAT----T-------TTAATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-----------TC-GGCGA-AGTGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGGCAAGTGCAGAATGCCGTAAAATTGGGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGTGC------TGATAAAAATCTG----------------ACAACAA--------------ATT----------------------------ATAGCTTTAATACGACTG
droEre2 scaffold_4929:13560298-13560551 - AATCGCGG----AATCGA--GAAATATAATTGTGT--TTAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TGTAGATCAGAC-GGCGA-AATGTCTATAAAAAGCA-C-ATC--GTTTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGTGTGCCGTACAATTGGGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTACAGC------TGATAAAAATCTC----------------CCAACAA--------------ATA----------------------------ATAGCATTAATACGACTG
droYak3 2L:8271349-8271588 + AATCGC--------------GAAATACAATTGTGT--TTAGTCTAT----T-------TCGATT------TCTTTGAGGTGAGCAA-------TGGGA---TTCTGG-TCCAGATCGTTC-GCCGA-AGTATCTATAAAAAGCA-T-ATA--GTTTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGTGTGCCGTAAAATTGGGA--AAACAATTTTGTTTACTCAT-----TGGCACCGCAA-TT----------------TGT-TTTGATTAGAGC------TGATAGAAATCTT----------------CCAACAA--------------ATT----------------------------ATAGCATTAAAACGACTG
droEug1 scf7180000409122:244786-245058 + AAATGCTT-------CTC--GAAACAAAATTGTTT--TCAGTTTAC----T-------CTAATT------TCTTTGAGGTGAGCAA-------AGTGA---TTTTGG-TCTACATCGGTC-GGCGACAATTTCTATAAAAAGCA-T-TTATATTTTTTCCACCCATCACCTGCT--ATAATATA----CT-T----TGGCTTGTCAAGTGCAGTGTGGCGTAAAATTGGAAG-AAATGATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACTAA--------------TTT----------------------------GTAGCCTTAATGCAACCG
droBia1 scf7180000302422:1173058-1173327 - AAAAGCAC----AAGTGA--AAAACAAAATTGTGT--TCAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------AGCGA---TTTTTG-CCTAGATCGGTC-G----CTATTTCTATAAAAAGTC-C-CAA--GTTTTTGCACCCATCGCCCGCC--ATAATATA----CA-T----TGGCTTGTCAAGCGCAGTATGCCGTAAAATTGGGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAAC------TGATAAAAATCTC----------------CCACTAA--------------ATT----------------------------ATACCCTTAATGCGAGCG
droTak1 scf7180000415863:420634-420913 - AAACGCCTCGAGATGTGG--GAAACAAAAGTGTGTTTTTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------AGTGA---TTTTCG-CTTAGATCGGCC-GGCGACAATTTCTATAAAAAGCC-C-CAA--GTTTTTGCACCCATCACCCGCT--ATAATATA----CA-T----TGGCTTGTCAAGTGCAGTTTGCCGTGAAATTGGGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACTAA--------------ATT----------------------------ATACCCTTAATGCGACCG
droEle1 scf7180000491028:3334463-3334713 - AAATTCTT--AAA--------------AATGCTGT--TTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAC-------AGTGA---CTTTGG-TCTAGGTCGGTC-GACGACAAATTCTATAAAAAGCC-T-TAA--ATGTTTCCACCCTTCAGCCGCT--ATAATATA----GA-T----TTGCTTGTTAAGTGCAATGCGCCGTAAAATTAGGAG-AAACAATTTTGTTTACTCATTTAACTCGCGCCGCAA-TT----------------TGC-TTTGATTGGAGC------TGATAAAAATCTT----------------CCACTGA--------------ATA----------------------------ATAG-------------G
droRho1 scf7180000779410:337835-338078 + AATCGC-------------------------------TTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------GGTGT---CTTCGG-TCTAGATCGGTA-GTCGACAATTTCTATTAAAAAAACCGA-A--ATTTTTCCTCCCATCACCGGCT--ATAATATATGCACA-T----TGGTTTGCTGAGTGCAGTGTGCCGTAAAATTGGAAG-AAACAATTTTGTTTACTCATTTAATTGGCGCCGCAA-TT----------------TGT-TTTGATTCGAGC------TGATAAAAATCTT----------------CCACTAA--------------T----------------------------------------TGCTACAG
droFic1 scf7180000453493:224006-224275 + AAACGCTTCTAAAAGTGG--GGAGCAAAATTGTG-----------C----T-------CTGATT------TCTTTGAGGTGAGCAAA-----AAGTGA---CTTTCA-TCTAGATCGGTCAGGCGACAATTTCTATAAAAAGCC-G-CAA--G-TTTTCCGCCCATCAATTGCT--ATAATGTA----AA-T----TGGCTTTTCAAGTTCAGTGTGCCATAAAATTGTGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACAAA--------------TTC----------------------------GCAAAC-GAATGTCGCCG
droKik1 scf7180000302677:1118445-1118733 + AAGCGCACAAAAAAGTGCCGAAAACAAAC----GT--AAAGTTTAC----T-------TTTATTTACAAATCTTTGAGGAGAGCAG-------ACTGATCATTTC-------G----ATC-GGAGA---GATCTATAAAAAGCC-A-CTC--G-GCTGCCACCCATCAGGCGCT--TTATTATA----AAAT----CAAACAGTCAAGTGCAGTGTGCCGTAAAATTGGGAG-AAACAAT-TTGTTTACTCATTTAATTCATCTCGCCA-TTT-GTTATTGTGCAATTTATTGTTGATTCGAGC------TGATAAAAATCTTC-----------C---CCACTCA--------------ATT----------------------------ATAGAATTAATACGACCG
droAna3 scaffold_12943:2422040-2422327 - AAGCGCCT-TAAAAGTGC--CAAATAAA-----GT--TTAGTT---TTGATTCGTATTTTAATC------T-TCTCAGGTAAGCAA-------AGGCA---CTTCC-----------ATC-GACGACAATTTCAATAAAAAACA-A-ATC-AG-TTCTCAACTCACCAAATA-TATATAATATT----CA-C----TCGCTTGACAAGTGCATCGTGCCGTAAAATTGGCAG-AAACAAATTTGTTTACTCGTTTAATTAAGAGCGACAGC-TAGTGATTGTGCAAATTGT-TTGGATTCCAGC------TGATAAGCATCTCG-----------C---ACACCCA--------------ATT----------------------------ATAGACTTAATGCGACCG
droBip1 scf7180000396728:905225-905516 + AAGCACCA-CAAAAGTGC--CAAATAAA-----GT--TTAGTT---TTGATTTGTATTCTCATC------T-TCCCAGGTAAGCAA-------AGGTA---CTTCC-----------ACA-GCTGACAATTTCAATAAAAAACA-A-ATC-AG-TTTTCCACCCACAAAATAATTTATAATATA--CATA-T----TCGCTTGACAAGTGCATCGTGCCGTAAAATTGGCAGAAAACAAATTTGTTTACTCGTTTAATTTAGAGCGACAGC-TAGTGATTGTGTGAATTGT-TTGGATTCCAGC------TGATAAGCATCTCG-----------C---ACACCCA--------------ATT----------------------------ATAGACTTAATGCGACCG
dp5 4_group3:9169971-9170251 + GAACGT---------------------------GT--TTAATT---TTATTCCAATTT-------GTGCTTTTTTGAGGTGAGCAAAGACAGAAGAGA---TTCTGTATCA---------------AGATTTCTATAAAAAGCC-A-AA---G--------CTCATCCCAATCT--GTGGAATA----TA-TTGACTGGCT---AAAGTGCAGCGAATCGTGACA---------------TTTGTTTACTCATTTAATTTGTTTCGCAA-TT----------------TGT-TTTGGTTTGAGCCTCGGATGATAAGCAGATTGGCGCGAGGTGGCACTCCATTAATGCGACGCCCTCCGATTATAGCCAGTGCAAACAATTTGCTTAGTTATA---------------
droPer2 scaffold_8:358502-358782 + GAACGT---------------------------GT--TTAATT---TTATTCCAATTT-------GTGCTTTTTTGAGGTGAGCAAAGACAGAAGAGA---TTCTGTATCA---------------AGATTTCTATAAAAAGCC-A-AA---G--------CTCATCCCAATCT--GTGGAATA----CA-TTGACTGGCT---AAAGTGCAGCGAATCGTGACA---------------TTTGTTTACTCATTTAATTTGTTTCGCAA-TT----------------TGT-TTTGGTTTGAGCCTCGGATGATAAGCAGATTGGCGCGAGGTGGCACTCCATTAATGCGACGCCCTCCGATTATAGCCAGTGCAAACAATTTGCTTAGTTATA---------------
droWil2 scf2_1100000004521:2506884-2506928 + CAACACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCTTTGAC----------------------------ATTTAAAT------TGATAAACATCTC---------------------------------------------------------------------------------GAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAACGCAT-------CGA--GAAATATAATTGTGT--TCAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TCTAGATCGGTC-GGTGA-AATGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGAGTGCCGTGAAATTGTGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGAGC------TGATAAAAATCTG----------------CCAACAA--------------ATT----------------------------ATACCTTTAATACGACTGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................................................................................CAT-------AGTGA---TTTTGG-TCTA.........................................................................................................................................................................................................................................................................................................1815.00540000000000100000
............................................................................AGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---TT..................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.................................................................................................................................................................................................................................................................................................GT-TTTGATTGGAGC------TGATAAA............................................................................................2111.00100000010000000000
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---TTTT................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
............................................................................AGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2011.00100000000000100000
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..............................................................................GTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................1811.00100000000000100000
..................................................................................................................TCGGTC-GGTGA-AATG......................................................................................................................................................................................................................................................................................1550.20100000001000000000
...........................................................................................................................................................................................................TCAAGTGCAGAGTGG...............................................................................................................................................................................................15200.10200000000020000000
.......................................................................................................TTGG-TCTAGATCGGA..................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
AAACGCAT-------CGA--GAAATATAATTGTGT--TCAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TCTAGATCGGTC-GGTGA-AATGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGTCCAGTGCAGAGTGCCGTGAAATTGTGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGAGC------TGATAAAAATCTG----------------CCAACAA--------------ATT----------------------------ATACCTTTAATACGACTGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
........................................................................CTTGAGGTGAGCAT-------AGTGA---TTTTGG-T............................................................................................................................................................................................................................................................................................................2612.0020200
.....................................................................................................TTTTGG-TCTAGATCGGTC-GGT.............................................................................................................................................................................................................................................................................................2111.0010100
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---TT..................................................................................................................................................................................................................................................................................................................2311.0010001
...............................................................T------TCCTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2311.0010100
..............................................................TT------TCCTTGAGGTGAGCAT-------AGTGA---TT..................................................................................................................................................................................................................................................................................................................2511.0011000
............................................................GATT------TCCTTGAGGTGAGCA....................................................................................................................................................................................................................................................................................................................................1911.0010100
..............................................................................GTGAGCAT-------AGTGA---TTTTGG-TCTAGATCG....................................................................................................................................................................................................................................................................................................2811.0010100
........................................................................CTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2011.0010001
........................................................................CTTGAGGTGAGCAT-------AGTGA---TT..................................................................................................................................................................................................................................................................................................................2111.0010100
......................................................................................................................................................................................................GCTTGTCCAGTGCAGAGTG................................................................................................................................................................................................1911.0011000
.............................................................ATT------TCCTTGAGGTGAGCAT-------AGTGA---....................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---TTTTGG-.............................................................................................................................................................................................................................................................................................................2611.0010100
.........................................................................TTGAGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
AAACGCAT-------CGA--GAATTATAATTGTGT--TCAGTTTAT----T-------TTAATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-----------TC-GGCGA-AGTGTCTATAAAAAGCA-C-CTA--G-TTTTCCACCG------------------------------ATTGGCTTGGCAAGTGCAGAATGCCGTAAAATTGGGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTGGTGC------TGATAAAAATCTG----------------ACAACAA--------------ATT----------------------------ATAGCTTTAATACGACTGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.............................................................ATT------TCCTTGAGGTGAGCA....................................................................................................................................................................................................................................................................................................................................18115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000100011000002100101000000000000100000001000001000000000000000000000000000010000
........................................................................CTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................20112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000100103001012000000000001000
......................................................................TCCTTGAGGTGAGCAT-------AG..........................................................................................................................................................................................................................................................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000001000002000000000000000000001000000000000100000000000000000000000000000000
........................................................................CTTGAGGTGAGCAT-------AGTGA---....................................................................................................................................................................................................................................................................................................................19111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000010000200410000000000000000
........................................................................CTTGAGGTGAGCAT-------AGTG........................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001000001100000000000000000000000010000000000000000000000000100000000101000
............................................................................AGGTGAGCAT-------AGTGA---TTG.................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000300000000000000000000000000000200000000000000100000000000000000
............................................................................AGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000300000100000000000000000000000000000
.........................................................................TTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000010
.............................................................ATT------TCCTTGAGGTGAGCAT-------AG..........................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000010000000000000000
.........................................................................TTGAGGTGAGCAT-------AGTGA---....................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000010000000000
...............................................................T------TCCTTGAGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
............................................................AATT------TCCTTGAGGTGAGCA....................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---TTTT................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................GAGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---....................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100
........................................................................CTTGAGGTGAGCAT-------AGTGA---TTTTGG-----------T..................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000
....................................................................................AT-------AGTGA---TTTTGG-----------TC-GGC.............................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................TTGAGGTGAGCAT-------AGTGA---TTG.................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
............................................................................AGGTGAGCAT-------AGTGA---TTTTGG-----------...................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000
..............................................................................GTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000
..........................................................................TGAGGTGAGCAT-------AGTGA---TTG.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............................................................ATT------TCCTTGAGGTGAGCAT-------A...........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................AGGTGAGCAT-------AGTGA---TTTTGG-----------TC-GGCGA-..........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................C-GGCGA-AGTGTCTATAAAAAGCA-C-CT....................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GGCTTGGCAAGTGCAGAA..................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTGAGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................TT------TCCTTGAGGTGAGCAT-------A...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTATAATTGTGT--TCAGTTTAT----T-------TTAAT..........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................ACCG------------------------------ATTGGCTTGGCAAGTGC......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AGGTGAGCAT-------AGTGA---TTTTGG-----------TC-................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......AT-------CGA--GAATTATAATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................CTTGAGGTGAGCAT-------AGTGA---TTTT................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................G-----------TC-GGCGA-AGTGTCTATA................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................T-------TTAATT------TCCTTGAGGTGAGCA....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................TCCTTGAGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................AT----T-------TTAATT------TCCTTGAGGTGAGCA....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................AGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATAAAAAGCA-C-CTA--G-TTTTC..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGGCAAGTGCAGAATGCCGTAAAATTGG....................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TGAGGTGAGCAT-------AGTGA---TT..................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................ATT------TCCTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................AGGTGAGCAT-------AGTGA---TTTT................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................TGAGGTGAGCAT-------AGTGA---TTTTGG-----------T..................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................T------TCCTTGAGGTGAGCAT-------AGT.........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................AATTGTGT--TCAGTTTAT----T-------TT.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GAGGTGAGCAT-------AGTGA---TTTTGG-----------TC-GG..............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GATAAAAATCTG----------------ACAACAA--------------ATT----------------------------ATAGC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAACGCAT-------CGA--GAATTATAATTGTGT--TCAG................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GTGAGCAT-------AGTGA---TTTTGG-----------TC-................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....CAT-------CGA--GAATTATAATTG.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAATT------TCCTTGAGGTGAGCAT-------............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---TTTTG...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................CAT-------AGTGA---TTTTGG-----------TC-GGCGA-AGATC.....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................T------TCCTTGAGGTGAGCAT-------AG..........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................GCAT-------AGTGA---TTTTGG-----------TC-GGC.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................ATT------TCCTTGAGGTGAGCT....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................T------TCCTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................GA---TTTTGG-----------TC-GGCGA-AGTGTCTATAAA..............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................CTTGAGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................T-TTTGATTGGTGC------TGATAAAGC..........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TT------TCCTTGAGGTGAGCAT-------AGTG........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................T------TCCTTGAGGTGAGCAT-------AGTGA---....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................TCCTTGAGGTGAGCAT-------AGTG........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---TTT.................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................ATTATAATTGTGT--TCAGT...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CACCG------------------------------ATTGGCTTGGCAAGTGC......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AT-------AGTGA---TTTTGG-----------TC-GGCAT-C.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTGAGGTGAGCAT-------AGTGA---TTTTGG-----------T..................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................CCTTGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................TGAGGTGAGCAT-------AGTGA---T...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............................................................ATT------TCCTTGAGGTGAGCAT-------............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..............................................................................................GTGA---TTTTGG-----------TC-GGCGA-AGTG......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................TAAAAAGCA-C-CTA--G-TTGA...........................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AATCGCGG----AATCGA--GAAATATAATTGTGT--TTAGTTTAT----T-------TTGATT------TCCTTGAGGTGAGCAT-------AGTGA---TTTTGG-TGTAGATCAGAC-GGCGA-AATGTCTATAAAAAGCA-C-ATC--GTTTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGTGTGCCGTACAATTGGGAA-AAACAATTTTGTTTACTCATTTAATTTGCACCGCAA-TT----------------TGT-TTTGATTACAGC------TGATAAAAATCTC----------------CCAACAA--------------ATA----------------------------ATAGCATTAATACGACTGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.................................................................................................................................................................................................................GCAGTGTGCCGTACAATTGGGAA-AAAC............................................................................................................................................................................2711.0010000100
...............................GTGT--TTAGTTTAT----T-------TTGAT..........................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
AATCGC--------------GAAATACAATTGTGT--TTAGTCTAT----T-------TCGATT------TCTTTGAGGTGAGCAA-------TGGGA---TTCTGG-TCCAGATCGTTC-GCCGA-AGTATCTATAAAAAGCA-T-ATA--GTTTTTCCACCG------------------------------ATTGGCTTGTCAAGTGCAGTGTGCCGTAAAATTGGGA--AAACAATTTTGTTTACTCAT-----TGGCACCGCAA-TT----------------TGT-TTTGATTAGAGC------TGATAGAAATCTT----------------CCAACAA--------------ATT----------------------------ATAGCATTAAAACGACTGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................GAAATCTT----------------CCAACAA--------------ATT----------------------------ATAGCA............2411.00101000000000
................................................................................................................................................................ACCG------------------------------ATTGGCTTGTCAAGTGCAGTG..................................................................................................................................................................................................2511.00101000000000
droEug1
AAATGCTT-------CTC--GAAACAAAATTGTTT--TCAGTTTAC----T-------CTAATT------TCTTTGAGGTGAGCAA-------AGTGA---TTTTGG-TCTACATCGGTC-GGCGACAATTTCTATAAAAAGCA-T-TTATATTTTTTCCACCCATCACCTGCT--ATAATATA----CT-T----TGGCTTGTCAAGTGCAGTGTGGCGTAAAATTGGAAG-AAATGATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACTAA--------------TTT----------------------------GTAGCCTTAATGCAACCGSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAGCAC----AAGTGA--AAAACAAAATTGTGT--TCAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------AGCGA---TTTTTG-CCTAGATCGGTC-G----CTATTTCTATAAAAAGTC-C-CAA--GTTTTTGCACCCATCGCCCGCC--ATAATATA----CA-T----TGGCTTGTCAAGCGCAGTATGCCGTAAAATTGGGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAAC------TGATAAAAATCTC----------------CCACTAA--------------ATT----------------------------ATACCCTTAATGCGAGCGSizeHit CountTotal NormTotal
No Reads
droTak1
AAACGCCTCGAGATGTGG--GAAACAAAAGTGTGTTTTTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------AGTGA---TTTTCG-CTTAGATCGGCC-GGCGACAATTTCTATAAAAAGCC-C-CAA--GTTTTTGCACCCATCACCCGCT--ATAATATA----CA-T----TGGCTTGTCAAGTGCAGTTTGCCGTGAAATTGGGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACTAA--------------ATT----------------------------ATACCCTTAATGCGACCGSizeHit CountTotal NormTotal
No Reads
droEle1
AAATTCTT--AAA--------------AATGCTGT--TTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAC-------AGTGA---CTTTGG-TCTAGGTCGGTC-GACGACAAATTCTATAAAAAGCC-T-TAA--ATGTTTCCACCCTTCAGCCGCT--ATAATATA----GA-T----TTGCTTGTTAAGTGCAATGCGCCGTAAAATTAGGAG-AAACAATTTTGTTTACTCATTTAACTCGCGCCGCAA-TT----------------TGC-TTTGATTGGAGC------TGATAAAAATCTT----------------CCACTGA--------------ATA----------------------------ATAG-------------GSizeHit CountTotal NormTotal
No Reads
droRho1
AATCGC-------------------------------TTAGTTTAC----T-------CTGATT------TCTTTGAGGTGAGCAA-------GGTGT---CTTCGG-TCTAGATCGGTA-GTCGACAATTTCTATTAAAAAAACCGA-A--ATTTTTCCTCCCATCACCGGCT--ATAATATATGCACA-T----TGGTTTGCTGAGTGCAGTGTGCCGTAAAATTGGAAG-AAACAATTTTGTTTACTCATTTAATTGGCGCCGCAA-TT----------------TGT-TTTGATTCGAGC------TGATAAAAATCTT----------------CCACTAA--------------T----------------------------------------TGCTACAGSizeHit CountTotal NormTotal
No Reads
droFic1
AAACGCTTCTAAAAGTGG--GGAGCAAAATTGTG-----------C----T-------CTGATT------TCTTTGAGGTGAGCAAA-----AAGTGA---CTTTCA-TCTAGATCGGTCAGGCGACAATTTCTATAAAAAGCC-G-CAA--G-TTTTCCGCCCATCAATTGCT--ATAATGTA----AA-T----TGGCTTTTCAAGTTCAGTGTGCCATAAAATTGTGAG-AAACAATTTTGTTTACTCATTTAATTCGCGCCGCAA-TT----------------TGT-TTTGATTTGAGC------TGATAAAAATCTC----------------CCACAAA--------------TTC----------------------------GCAAAC-GAATGTCGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCGCACAAAAAAGTGCCGAAAACAAAC----GT--AAAGTTTAC----T-------TTTATTTACAAATCTTTGAGGAGAGCAG-------ACTGATCATTTC-------G----ATC-GGAGA---GATCTATAAAAAGCC-A-CTC--G-GCTGCCACCCATCAGGCGCT--TTATTATA----AAAT----CAAACAGTCAAGTGCAGTGTGCCGTAAAATTGGGAG-AAACAAT-TTGTTTACTCATTTAATTCATCTCGCCA-TTT-GTTATTGTGCAATTTATTGTTGATTCGAGC------TGATAAAAATCTTC-----------C---CCACTCA--------------ATT----------------------------ATAGAATTAATACGACCGSizeHit CountTotal NormTotal
No Reads
droAna3
AAGCGCCT-TAAAAGTGC--CAAATAAA-----GT--TTAGTT---TTGATTCGTATTTTAATC------T-TCTCAGGTAAGCAA-------AGGCA---CTTCC-----------ATC-GACGACAATTTCAATAAAAAACA-A-ATC-AG-TTCTCAACTCACCAAATA-TATATAATATT----CA-C----TCGCTTGACAAGTGCATCGTGCCGTAAAATTGGCAG-AAACAAATTTGTTTACTCGTTTAATTAAGAGCGACAGC-TAGTGATTGTGCAAATTGT-TTGGATTCCAGC------TGATAAGCATCTCG-----------C---ACACCCA--------------ATT----------------------------ATAGACTTAATGCGACCGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
AAGCACCA-CAAAAGTGC--CAAATAAA-----GT--TTAGTT---TTGATTTGTATTCTCATC------T-TCCCAGGTAAGCAA-------AGGTA---CTTCC-----------ACA-GCTGACAATTTCAATAAAAAACA-A-ATC-AG-TTTTCCACCCACAAAATAATTTATAATATA--CATA-T----TCGCTTGACAAGTGCATCGTGCCGTAAAATTGGCAGAAAACAAATTTGTTTACTCGTTTAATTTAGAGCGACAGC-TAGTGATTGTGTGAATTGT-TTGGATTCCAGC------TGATAAGCATCTCG-----------C---ACACCCA--------------ATT----------------------------ATAGACTTAATGCGACCGSizeHit CountTotal NormTotal
No Reads
dp5
GAACGT---------------------------GT--TTAATT---TTATTCCAATTT-------GTGCTTTTTTGAGGTGAGCAAAGACAGAAGAGA---TTCTGTATCA---------------AGATTTCTATAAAAAGCC-A-AA---G--------CTCATCCCAATCT--GTGGAATA----TA-TTGACTGGCT---AAAGTGCAGCGAATCGTGACA---------------TTTGTTTACTCATTTAATTTGTTTCGCAA-TT----------------TGT-TTTGGTTTGAGCCTCGGATGATAAGCAGATTGGCGCGAGGTGGCACTCCATTAATGCGACGCCCTCCGATTATAGCCAGTGCAAACAATTTGCTTAGTTATA---------------SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
........................................................................TTTGAGGTGAGCAAAGACAGAAGAGA---TT..................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................................................................................................................................................................................................................................................................................................................................GCGCGAGGTGGCACTCCA...................................................................1811.0010100000000
.............................................................................GGTGAGCAAAGACAGAAGAGA---TTCTG...............................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................TGAGCAAAGACAGAAGAGA---TTCTG...............................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................AATCGTGACA---------------TTTGTTTA.................................................................................................................................................................1811.0010001000000
..........................................................................................................................................................................................................................................................................................................TTGAGCCTCGGATGATAAG............................................................................................1911.0010000001000
droPer2
GAACGT---------------------------GT--TTAATT---TTATTCCAATTT-------GTGCTTTTTTGAGGTGAGCAAAGACAGAAGAGA---TTCTGTATCA---------------AGATTTCTATAAAAAGCC-A-AA---G--------CTCATCCCAATCT--GTGGAATA----CA-TTGACTGGCT---AAAGTGCAGCGAATCGTGACA---------------TTTGTTTACTCATTTAATTTGTTTCGCAA-TT----------------TGT-TTTGGTTTGAGCCTCGGATGATAAGCAGATTGGCGCGAGGTGGCACTCCATTAATGCGACGCCCTCCGATTATAGCCAGTGCAAACAATTTGCTTAGTTATA---------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..............................................................................GTGAGCAAAGACAGAAGAGA---TTCTG...............................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
CAACACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCTTTGAC----------------------------ATTTAAAT------TGATAAACATCTC---------------------------------------------------------------------------------GAATASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads

Generated: 05/18/2015 at 12:46 PM