ID:

dsi_8426

 Coordinate:

2r:3394027-3394176 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.6 -9.0 -8.9 -8.7

Flybase annnotation

Antisense to exon [2r_3394195_3394733_-]; Antisense to CDS [2r_3394195_3394733_-]; Antisense to CDS [2r_3393897_3394076_-]; Antisense to exon [2r_3393624_3394076_-]; Antisense to intron [2r_3394077_3394194_-]

No Repeatable elements found

Sense Strand Reads

CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGGAATGACAGATACAAGATTGTTTTATCTATGTTCTCTGCTTGTAAAACTCTTGAACAAATAAGTCTACATAAGCTAATAATTTCATTTCTTATACAGGGTATTGTGAACACTCACTTGTCGCTCGCCCATCTGATGTGCTTTCTTCT
*******************************************************************************************************.......................((.((((((.....((((((...............))))))..)))).)).))*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M024
male body		 O002
Head
 SRR553488
RT_0-2 hours eggs
..........................TTCATCAGCTTGTGGATAACT........................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
....................................TGGGGATAACTGGCTT...................................................................................................................................................................................................... 16 1 4 1.00 4 0 4 0 0 0
............................CATCAGCTTGTGGATAACTGGCT....................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................GAATGACAGATACAAGATTGT.............................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................TATACAGGGTATTGTGAACACT................................... 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................CAAATAAGTCTACATAAGCTA....................................................................... 21 0 1 1.00 1 0 0 0 1 0
..................................GTTGGGGATAACTGGCTTG..................................................................................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0
..........................TTCATCAGCTTGTGGATAACC........................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................GGTTTCTGCTCGTAAAACTCT................................................................................................ 21 3 3 0.67 2 0 0 2 0 0
.........................CTTCATCACCTTGTGGA................................................................................................................................................................................................................ 17 1 3 0.33 1 0 0 0 0 1
..............................TCAGTTTAGGGATAACTGGCTT...................................................................................................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0
..............................................TGGCTTGATGTTCTCG............................................................................................................................................................................................ 16 0 3 0.33 1 0 1 0 0 0
......................................GGGATAACTGGCTTGA.................................................................................................................................................................................................... 16 1 4 0.25 1 0 1 0 0 0
.................................GCGCGGGGATAACTGGCTTG..................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0
........................................GATAACTGGCTTGGT................................................................................................................................................................................................... 15 1 4 0.25 1 0 1 0 0 0
..................................CCAGTGGATAACTGGCTT...................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0
.....................................GGGGATAACTGGCTTG..................................................................................................................................................................................................... 16 1 7 0.14 1 0 1 0 0 0
.....................................................................................................................................................CCTCTTGAACAAAGAACTCT................................................................................. 20 3 7 0.14 1 1 0 0 0 0
........................................................................................................................................TTCTGCTCGTAAAACTCT................................................................................................ 18 2 8 0.13 1 0 0 1 0 0
.....................................ATGGATAACTGGCTT...................................................................................................................................................................................................... 15 1 9 0.11 1 0 1 0 0 0
.....................................GGGGATAACTGGCTT...................................................................................................................................................................................................... 15 1 11 0.09 1 0 1 0 0 0
...................................................................................................................................................................AAGTCTACATGAGCTAAA..................................................................... 18 2 11 0.09 1 0 1 0 0 0
......................................GGGATAACTGGCTTGAC................................................................................................................................................................................................... 17 2 13 0.08 1 0 1 0 0 0
.................................GCTAAGGGATAACTGGCTT...................................................................................................................................................................................................... 19 3 16 0.06 1 0 1 0 0 0
................................................................................................................................................GTAAAACTGTTGAAC........................................................................................... 15 1 17 0.06 1 0 0 0 0 1
.....................................................................CGATACTGGTCAGTTA..................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

####################################################################################################----------------------------------------------------------------------------------------------------------------------################################
GTTTTTACATGAAGAACGGCGTCAGGAAGTAGTCGAACACCTATTGACCGAACTACAAGAGCTACGGGCGCTATGACCGGTCAAGTAACATCATCTGTTTGACCTTACTGTCTATGTTCTAACAAAATAGATACAAGAGACGAACATTTTGAGAACTTGTTTATTCAGATGTATTCGATTATTAAAGTAAAGAATATGTCCCATAACACTTGTGAGTGAACAGCGAGCGGGTAGACTACACGAAAGAAGA
***********************************************************************.......................((.((((((.....((((((...............))))))..)))).)).))******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
................................................................................TCAAGTAACATCATCTGTTTAAC................................................................................................................................................... 23 1 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0
................................................................CGGGCGCTATGACCGGTCAAG..................................................................................................................................................................... 21 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0
....................................................CTACAAGAGCTACGGGCGCTA................................................................................................................................................................................. 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.........................................................AGAGCTACGGGCGCTATGACC............................................................................................................................................................................ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...................CGTCAGGAAGTAGTCGAACACCTA............................................................................................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
................................................................................TCAAGTAACATCATCTGTTTA..................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................TCAAGTAACATCATCTGTTTAA.................................................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................GTCAGGAAGTAGTCGAACACCTATTG............................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGAGAACTTGTTTATTCAGAT................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................CGTCAGGAAGTAGTCGAA..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................CGGCGTCAGGAAGTAGTCGAA..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................TCAGGAAGTAGTCGAACACCTA............................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................GCTACGGGCGCTATGACCGGTCAAGTAA.................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGGGTAGACTACACGAAA..... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................AAACACCTATTGACCGAACTAC.................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................CGGGCGCTATGACCGGTCAAGTAACATCAT............................................................................................................................................................ 30 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................CGTCAGGAAGTAGTCGAACACCTAT.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................CGGGTAGACTACACGAAAG.... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......CATGAAGAACGGCGTCAGGAA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................CAAGAGCTACGGGCGCTATGACC............................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................CGGGCGCTATGACCGGTCAAGTAA.................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................TCAAGTAACATCATCTGTTTAACAG................................................................................................................................................. 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................CAAGAGCTACGGGCGCTATGACCGG.......................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................AGCTCCGGGCGCTATGACCGGTCAAGTA................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................CGGGCGCTATGACCGGTCAA...................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................GACCGAACTACAAGAGCTA.......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................GTCAGGAAGTAGTCGAACACC................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GGAGAACTTTTTTATTCAGC................................................................................. 20 3 8 1.00 8 0 0 0 0 1 7 0 0 0 0 0
.................................................................................................................................................................................................................TTGCGAGTGGACAGCGAGCGGT................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................CCGAACTACAAGAGCTACGGGCGCTAT................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............ACGGCGTCAGGAAGTAGTCGAACACCT................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................CCAAGTAACATCATCTGTTTA..................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..................GGGGCAGGAAGTAGCCGA...................................................................................................................................................................................................................... 18 3 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
................................................................................TCAAGTAACATCGTCTTTT....................................................................................................................................................... 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
....................GTCAGGAAGTAGTGGCAC.................................................................................................................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GGGAGAACTTTTTTATTCAG.................................................................................. 20 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGAGCGGGTTGACTACA.......... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................GAGAGCGGGTTGACTAC........... 17 2 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................TTATTGAAGTAAAGAA........................................................ 16 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3393977-3394226 + dsi_8426 CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGGAATGACA----GATA----------CAAGATTG-TTT-------------TA---TCTATGTTCTCT-----GCTTGTAAAACTCTTGAACAAA-----------------------------------------TAAGTCTACATAAG---------------------------------------------------------------------------------------------------------------------------CTAATAAT-----------------------------------------TTCATTTCTTATACAGGGTATTG------------------------TGAACACTCACTTGTCGCTCGCCCATCTGATGTGCT------TTCTTCT
droSec2 scaffold_1:193931-194153 + CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGGAATGACA----GATA----------CAAGATTG-TTT-------------TA---TCTATGTTCTCT-----GCTTGTAA--------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------CTAATAAT-----------------------------------------TTCATTTCTTATACAGGGTATTG------------------------TGAACACTCACCTGTCGCTCGCCCATCTGATGTGCT------TTATTCT
dm3 chr2R:2530289-2530539 + CAAAAATGTACTTCTTGCCGCAGTCCTTCATTAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGAAATTACA----GATA----------AAAGATTG-TTT-------------TA---TATATGTTCTCT-----GCTTGTAAAAGTCTTTAACAAA-----------------------------------------TAAGTCTACATAAG---------------------------------------------------------------------------------------------------------------------------CTAATATT----------------------------------------TTTAATTTCTTATACAGGGTATTG------------------------TGAACACTCACCTGTCGCTCGCCCATCTGATGTGCT------TTCTTCT
droEre2 scaffold_4929:20014255-20014427 - CAAAAATGTACTTCTTGCCGCAATCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCAATGCCTGCGATTCTGGCCAGTTCATTGTAGTAGACAAACTAGAATTACA----GATA----------AAAGATCG-TTGTTTGACATAAACTCG---TACATGTTTTTT-----GTTTGCAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC------TTATACA
droYak3 2L:15276441-15276603 + CAAAAATGTATTTCTTGCCGCAATCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATACCCGCGATGCTGGCCAGTTCATTGTAGTAGACAAACTGGAAATACA----GATA----------AAAGAT-G-TTT-------------AA---AAAA-TTTCTTT-----GCTTTCAAAACTCTTA--GAAA-----------------------------------------TAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409758:258297-258510 + CAAAGATGTACTTTTTGCCGCAGTCCTTCATCAGCTTATGAATAACTGGCTTGATATTCTCAATGCCCGCGATCCTGGCCAGTTCATTGTAGTAAACAAACTAAAATA-CG----AGT-----------------------------------------------------TTTTAGTAA------------------AAATAAAAAGAAATTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------------------TTATAG-TTCCGGATATAGGAATCAACTATTGAATATTCACCTGTCGTTCACCCATCTGGTGTGCT------TTTTTAT
droBia1 scf7180000302292:3623729-3624091 - CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATGACTGGCTTGATGTTTTCAATGCCCGCGAGATTCGCCAGTTCATTGTAGTAGACAAACTATAAGTGTA----GATTGTAAGTAAAC------------------------------------------TT----------------------------------GAGATT--------------CGATGA--ATGA--------AGTACCCGGTACATTCTACCTCTGCACTTAAAGGGTGGAAGAGTACCTATGTATATAAATCTTTGTGCCTATGTATTTCCTACTAACAATGCTAAACAATTTTCCGGTTTGCTTATCTGTTTACTCATACTCATACTTGATTTTCTTTTCACAAATGTAGCGGACCTTGAAAGA------------------------GGT-GCT-----------------------CAACTCACCTGTCGCTCGCCCATCTGATGTGCC------TTCTTGT
droTak1 scf7180000415609:167093-167326 + CGAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATGACTGGTTTGATATTCTCGATGCCCGCAAGATTGGCCAGTTCGTTGTAGTAAACAAACTACAAGTTTA----GATTGT-----------------------------------------------------T----A------------------GTAAGAAATAAGATT--------------CGATCTATGTGA--------CATATCCGGT-----------------------ACTTGG-GG------------------------------------------------------------------------------------------------------------------------------------AGTTTTGATTCCCCTTTTAGTGCTTAG------------------------CAAATATTCACCTGTCGTTCGCCCATCTGATGTGCC------TTCTTGT
droEle1 scf7180000491217:488367-488477 - CAAAAATGTACTTCTTGCCACAGTCCTTCATTAGCTTGTGGATGACCGGTTTGATGTTTTCGATGCCAGCGATCCTTGCCAGTTCATTGTAGTAAACAAACTAAAAGCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000767536:74019-74219 + TCTCATTGAAACACTTGCTGCTTTCGTTATGTAACTTTGTCATAACTGCTTTAATGTTTTTTACTCCAGCAGTTTCCGCCAGGTCCGAGAAATAGTTAATCTTGAAACGAATAAAGATTTGATTGAAGT------------------------------------------ACATA-------------------------------------------------------------------------------A-----------------------TAT-------------------------------------------------------------------------------------------------------------------------------------TTAAGTAA-------------------ATGTAA-ATT-----------------------ATTCTTACTTGTTTAGGACCGAGCATATGAGCATGACGTTTCCTGT
droFic1 scf7180000453858:1587706-1587895 - AAAACATTGGCTG-------CTTTCGTTGTGTAATTTTGTCATAACAGCTTTGATGTTCACCACTCCGGCAGTTTTTGACAAGTCTGTAAAGTAGTCGATCTTGAAAACAA----AACA----------AAAAGTTT-TTT-------------TA---ACTGAGT------------------------------------------------------------------------------------------------------------------ACTGCA-AT------------------------------------------------------------------------------------------------------------------------------------AA-------------------ATGAAA-AAA-----------------------AATCTCACTTGTCTAGGACCCAGCATATGAGCTTGC---CGTTTCT
droKik1 scf7180000302470:97514-97703 + CGAAAATGTATTTTTTGCCACAGTCTTTCATCAGCTTATGAATGACAGGTTTGATGTTCTCGATGCCTGCTATCCTGGCCAGTTCATTGTAGTAAACAAACTGAAATGAAA----TAGA----------G-----------------------------------------------TGT------------------TCAGGGCAAAGAATCTTGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------TTATAG-TTG-----------------------ACATTTACCTGTCGTTCGCCCATTTGATGTGCT------TTTTTGC
droAna3 scaffold_13266:18499103-18499288 - CGAATATGTACTTCTTGCCACAGTCCTTCATCAGCTTGTGAATTACGGGCTTGATGTTTTCGATGCCAGCGATCCGAGCCAGCTCGTTGTAATAGACGAACTAAAATGAAT----CATG----------AAA-----TTGG-------------AAAAG----------------------------------------------------TTTCGGTTTGCTCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGCACCCACCTGTCTCTCGCCCATCTGGTGAGCC------TTCTTCC
droBip1 scf7180000395549:27788-27972 + CGAATATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGAATCACCGGCTTGATGTTTTCGATGCCAGCGATCCGAGCCAGCTCGTTGTAATAGACAAACTAAAATAAGT----GATG----------AAT-----GTGC-------------GAATG--------TTTT-----GTTTGG----------------------------------------ACAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG-----------------------ACACTTACCTGTCGCTCCCCCATCTGGTGAGCC------TTCTTCC
dp5 3:18234083-18234285 + CGAAGATGTACTTCTTACCGCAGTCCTTCATCAATTTAAGAATAACAGGCTTGATATTATCTATGCCTGCCATACGAGCCAGCTCGTTGTAGTAGTCAAACTGAAAATAAT----GGCCAAAAACAAGT------------------------------------------CAATAGCGT------------------GCAGGAAGGAGGATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGT------------------------CAG-GCA-----------------------ATGCTCACCTGTCGCTCGCCCATTTGATGGGCC------TTTTTGC
droPer2 scaffold_34:177130-177332 + CGAAGATGTACTTCTTACCGCAGTCCTTCATCAATTTAAGAATAACAGGCTTGATATTATCTATGCCTGCCATACGAGCCAGCTCGTTGTAGTAGTCAAACTGAAAATAAT----GGCCAAAAACAAGT------------------------------------------CAATAGCGT------------------GCAGGAAGGAGGATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGT------------------------CAG-GCA-----------------------ATGCTCACCTGTCGCTCGCCCATTTGATGGGCC------TTTTTGC
droWil2 scf2_1100000004512:1121041-1121229 - CGAATATATACTTTTTACCGCAATCCTTCATGACCTTATGAACCACGGGGCGTACGTTATCGATGCCAGCAATGCGGGTCAGATCATTGTAATATTCAAACTGGAGGGATA----AAGC----------AAGGTT-A-GCT---------------------------------------------------------------ATAAGAATCTT------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------TTAAGA------------------------AAG-TTT-----------------------TATCTCACCTGTCTTTCGCCCATTTGATGGGCC------TTCTTGC
droVir3 scaffold_12875:5356696-5356883 - CAAATATATATTTCTTGCCGCAATCCTTCATCAACTTCAGAATAACGGGCTTTATATTTTCAATGCCCGTCATATTCGCCAGCTCGTTGTAATAGTCAAACTATAACAAA---------------------------------------------------------------------------------------------------------------------------------TAAGTTATCATAAGCGGG-----------------------ACTTCA-AT------------------------------------------------------------------------------------------------------------------------------------AA------------------TTCGTAA-GCA-----------------------ATGCTCACCTGGCGCTCGCCCATTTGATGGGCC------TTCTTGC
droMoj3 scaffold_6496:24738946-24739151 + CAAATATATATTTCTTGCCACAATCCTTCATTAGCTTTAAAATAACGGGTTTTATATTCTCAATGCCCGTCATATTGGCCAATTCATTATAGTAATCGAACTGTTGGAGATGTGAGATA-----TTATT------------------------------------------ACATTTCAT------------------ATATGTATGTAAGTCAT--------------------------------------------------------------------GTG-AA--------------------------------------------------------------------------------------------------------------------------------GTAT------------------------CAGTATA-----------------------AGTAATACCTGACGTTCGCCCATTTGATGGGCC------TTTTTAC
droGri2 scaffold_15112:350825-351018 - CGAAAATATATTTCTTACCGCAATCCTTCATCAACTTTAAAATAACCGGCTTAATATTCTCAATGCCCGTCATATTTGCCAGCTCATTGTAATAATCAAACTAGAAAAATG----TAAG----------AGGAG----TTT-------------AA---------------------------------------------------------TTGGA-----TT------------------------------T-----------------------TGT-------------------------------------------------------------------------------------------------------------------------------------TTAAATAT-------------------ATGTAT-ACC----------------------ATTTCCCACCTGTCGTTCGCCCATTTGATGGGCC------TTCTTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGGAATGACA----GATA----------CAAGATTG-TTT-------------TA---TCTATGTTCTCT-----GCTTGTAAAACTCTTGAACAAA-----------------------------------------TAAGTCTACATAAG---------------------------------------------------------------------------------------------------------------------------CTAATAAT-----------------------------------------TTCATTTCTTATACAGGGTATTG------------------------TGAACACTCACTTGTCGCTCGCCCATCTGATGTGCT------TTCTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................TTCATCAGCTTGTGGATAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
............................CATCAGCTTGTGGATAACTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.......................................................................................................GAATGACA----GATA----------CAAGATTG-T..............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGGGTATTG------------------------TGAACACT.........................................2211.00110000000000000000
..................................................................................................................................................................................................CAAA-----------------------------------------TAAGTCTACATAAG---------------------------------------------------------------------------------------------------------------------------CTA..............................................................................................................................................2111.00100000100000000000
..........................TTCATCAGCTTGTGGATAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..............................................TGGCTTGATGTTCTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000000001000000
droSec2
CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGGAATGACA----GATA----------CAAGATTG-TTT-------------TA---TCTATGTTCTCT-----GCTTGTAA--------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------CTAATAAT-----------------------------------------TTCATTTCTTATACAGGGTATTG------------------------TGAACACTCACCTGTCGCTCGCCCATCTGATGTGCT------TTATTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................TCATCAGCTTGTGGATAACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
......TGTACTTCTTGCCGCAGTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................................................CTCGATGCCCGCGATACTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................................................TTCATTGTAGTAGACAAACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
........................................GATAACTGGCTTGATGTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........................................................................................................AATGACA----GATA----------CAAGATTG-TT.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------TTCATTTCTTATACAGGGTT............................................................................2111.0011000
dm3
CAAAAATGTACTTCTTGCCGCAGTCCTTCATTAGCTTGTGGATAACTGGCTTGATGTTCTCGATGCCCGCGATACTGGCCAGTTCATTGTAGTAGACAAACTGAAATTACA----GATA----------AAAGATTG-TTT-------------TA---TATATGTTCTCT-----GCTTGTAAAAGTCTTTAACAAA-----------------------------------------TAAGTCTACATAAG---------------------------------------------------------------------------------------------------------------------------CTAATATT----------------------------------------TTTAATTTCTTATACAGGGTATTG------------------------TGAACACTCACCTGTCGCTCGCCCATCTGATGTGCT------TTCTTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................TTT-------------TA---TATATGTTCTCT-----GCTT.....................................................................................................................................................................................................................................................................................................................................................21119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------TTTAATTTCTTATACAGGGT.............................................................................21115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCCCATCTGATGTGCT------T......22113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCTCGCCCATCTGATGT................21112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCTCGCCCATCTGATGTG...............22111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCCATCTGATGTGCT------TTC....21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGTGGATAACTGGCTTGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000
..........................................................................CTGGCCAGTTCATTGTAGTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................TGGATAACTGGCTTGATGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000
.........................CTTCATTAGCTTGTGGATAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TACTGGCCAGTTCATTGTAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................AAATTACA----GATA----------AAAGATTG-T..............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
..AAAATGTACTTCTTGCCGCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATGCCCGCGATACTGGCCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTG------------------------TGAACACTCACCTGTCG................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAAAATGTACTTCTTGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TACTTCTTGCCGCAGTCCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CAGTTCATTGTAGTAGACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................CGCAGTCCTTCATTAGCTTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTATACAGGGTATTG------------------------TG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................A----------AAAGATTG-TTT-------------TA---TATATGT...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTGCCGCAGTCCTTCATTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................AATTACA----GATA----------AAAGATTG-TT.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................TT-------------TA---TATATGTTCTCT-----GCTTGT...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................TCTCGATGCCCGCGATACTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................ATGTTCTCT-----GCTTGTAAAAGTCTTTAAC......................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACAGGGTATTG------------------------TGAACA...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................CTTCATTAGCTTGTGGATAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGTCGCTCGCCCATCTG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCACCTGTCGCTCGCC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCTTGCCGCAGTCCTTCATTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AAAAGTCTTTAACAAA-----------------------------------------TAAGT.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGCCCATCTGATGTG...............1811.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGATGTTCTCGATGCCCGCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTAGCTTGTGGATAACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATACAGGGTATTG------------------------TGAAC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCGATGCCCGCGATACTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CTTGATGTTCTCGATGCCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.........................................ATAACTGGCTTGATGTTCTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGCCCATCTGATGTGCT------TTC....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAAATTACA----GATA----------AAAGATTG-TT.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................GCCGCAGTCCTTCATTAGCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATTACA----GATA----------AAAGATTG-TTT-------------...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................TGTGGATAACTGGCTTGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................AGATTG-TTT-------------TA---TATATGTTCT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GATGTTCTCGATGCCCGCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACTCACCTGTCGCTCGA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TAACTGGCTTGATGTTCTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTAGCTTGTGGATAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................TAACTGGCTTGATGTTCTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................TACTGGCCAGTTCATTGTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTCGCCCATCTGATGTG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................TGGCTTGATGTTCTCGATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTGTAGTAGACAAACTGAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CTGGCTTGATGTTCTCGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TGGCCAGTTCATTGTAGTAGACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................TTGTGGATAACTGGCTTGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................GGATAACTGGCTTGATGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GGATAACTGGCTTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GATAACTGGCTTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCCATCTGATGTGGG------A......19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAAAATGTACTTCTTGCCGCAATCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCAATGCCTGCGATTCTGGCCAGTTCATTGTAGTAGACAAACTAGAATTACA----GATA----------AAAGATCG-TTGTTTGACATAAACTCG---TACATGTTTTTT-----GTTTGCAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC------TTATACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................TACA----GATA----------AAAGATCG-TTGTTTGAT......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
droYak3
CAAAAATGTATTTCTTGCCGCAATCCTTCATCAGCTTGTGGATAACTGGCTTGATGTTCTCGATACCCGCGATGCTGGCCAGTTCATTGTAGTAGACAAACTGGAAATACA----GATA----------AAAGAT-G-TTT-------------AA---AAAA-TTTCTTT-----GCTTTCAAAACTCTTA--GAAA-----------------------------------------TAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CAAAGATGTACTTTTTGCCGCAGTCCTTCATCAGCTTATGAATAACTGGCTTGATATTCTCAATGCCCGCGATCCTGGCCAGTTCATTGTAGTAAACAAACTAAAATA-CG----AGT-----------------------------------------------------TTTTAGTAA------------------AAATAAAAAGAAATTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------------------TTATAG-TTCCGGATATAGGAATCAACTATTGAATATTCACCTGTCGTTCACCCATCTGGTGTGCT------TTTTTATSizeHit CountTotal NormTotal
No Reads
droBia1
CAAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATGACTGGCTTGATGTTTTCAATGCCCGCGAGATTCGCCAGTTCATTGTAGTAGACAAACTATAAGTGTA----GATTGTAAGTAAAC------------------------------------------TT----------------------------------GAGATT--------------CGATGA--ATGA--------AGTACCCGGTACATTCTACCTCTGCACTTAAAGGGTGGAAGAGTACCTATGTATATAAATCTTTGTGCCTATGTATTTCCTACTAACAATGCTAAACAATTTTCCGGTTTGCTTATCTGTTTACTCATACTCATACTTGATTTTCTTTTCACAAATGTAGCGGACCTTGAAAGA------------------------GGT-GCT-----------------------CAACTCACCTGTCGCTCGCCCATCTGATGTGCC------TTCTTGTSizeHit CountTotal NormTotal
No Reads
droTak1
CGAAAATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGGATGACTGGTTTGATATTCTCGATGCCCGCAAGATTGGCCAGTTCGTTGTAGTAAACAAACTACAAGTTTA----GATTGT-----------------------------------------------------T----A------------------GTAAGAAATAAGATT--------------CGATCTATGTGA--------CATATCCGGT-----------------------ACTTGG-GG------------------------------------------------------------------------------------------------------------------------------------AGTTTTGATTCCCCTTTTAGTGCTTAG------------------------CAAATATTCACCTGTCGTTCGCCCATCTGATGTGCC------TTCTTGTSizeHit CountTotal NormTotal
No Reads
droEle1
CAAAAATGTACTTCTTGCCACAGTCCTTCATTAGCTTGTGGATGACCGGTTTGATGTTTTCGATGCCAGCGATCCTTGCCAGTTCATTGTAGTAAACAAACTAAAAGCACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCTCATTGAAACACTTGCTGCTTTCGTTATGTAACTTTGTCATAACTGCTTTAATGTTTTTTACTCCAGCAGTTTCCGCCAGGTCCGAGAAATAGTTAATCTTGAAACGAATAAAGATTTGATTGAAGT------------------------------------------ACATA-------------------------------------------------------------------------------A-----------------------TAT-------------------------------------------------------------------------------------------------------------------------------------TTAAGTAA-------------------ATGTAA-ATT-----------------------ATTCTTACTTGTTTAGGACCGAGCATATGAGCATGACGTTTCCTGTSizeHit CountTotal NormTotal
No Reads
droFic1
AAAACATTGGCTG-------CTTTCGTTGTGTAATTTTGTCATAACAGCTTTGATGTTCACCACTCCGGCAGTTTTTGACAAGTCTGTAAAGTAGTCGATCTTGAAAACAA----AACA----------AAAAGTTT-TTT-------------TA---ACTGAGT------------------------------------------------------------------------------------------------------------------ACTGCA-AT------------------------------------------------------------------------------------------------------------------------------------AA-------------------ATGAAA-AAA-----------------------AATCTCACTTGTCTAGGACCCAGCATATGAGCTTGC---CGTTTCTSizeHit CountTotal NormTotal
No Reads
droKik1
CGAAAATGTATTTTTTGCCACAGTCTTTCATCAGCTTATGAATGACAGGTTTGATGTTCTCGATGCCTGCTATCCTGGCCAGTTCATTGTAGTAAACAAACTGAAATGAAA----TAGA----------G-----------------------------------------------TGT------------------TCAGGGCAAAGAATCTTGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------TTATAG-TTG-----------------------ACATTTACCTGTCGTTCGCCCATTTGATGTGCT------TTTTTGCSizeHit CountTotal NormTotal
No Reads
droAna3
CGAATATGTACTTCTTGCCACAGTCCTTCATCAGCTTGTGAATTACGGGCTTGATGTTTTCGATGCCAGCGATCCGAGCCAGCTCGTTGTAATAGACGAACTAAAATGAAT----CATG----------AAA-----TTGG-------------AAAAG----------------------------------------------------TTTCGGTTTGCTCGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGCACCCACCTGTCTCTCGCCCATCTGGTGAGCC------TTCTTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................ATGTTTTCGATGCCAGCGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
CGAATATGTACTTCTTGCCGCAGTCCTTCATCAGCTTGTGAATCACCGGCTTGATGTTTTCGATGCCAGCGATCCGAGCCAGCTCGTTGTAATAGACAAACTAAAATAAGT----GATG----------AAT-----GTGC-------------GAATG--------TTTT-----GTTTGG----------------------------------------ACAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG-----------------------ACACTTACCTGTCGCTCCCCCATCTGGTGAGCC------TTCTTCCSizeHit CountTotal NormTotal
No Reads
dp5
CGAAGATGTACTTCTTACCGCAGTCCTTCATCAATTTAAGAATAACAGGCTTGATATTATCTATGCCTGCCATACGAGCCAGCTCGTTGTAGTAGTCAAACTGAAAATAAT----GGCCAAAAACAAGT------------------------------------------CAATAGCGT------------------GCAGGAAGGAGGATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGT------------------------CAG-GCA-----------------------ATGCTCACCTGTCGCTCGCCCATTTGATGGGCC------TTTTTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CGAAGATGTACTTCTTACCGCAGTCCTTCATCAATTTAAGAATAACAGGCTTGATATTATCTATGCCTGCCATACGAGCCAGCTCGTTGTAGTAGTCAAACTGAAAATAAT----GGCCAAAAACAAGT------------------------------------------CAATAGCGT------------------GCAGGAAGGAGGATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGT------------------------CAG-GCA-----------------------ATGCTCACCTGTCGCTCGCCCATTTGATGGGCC------TTTTTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CGAATATATACTTTTTACCGCAATCCTTCATGACCTTATGAACCACGGGGCGTACGTTATCGATGCCAGCAATGCGGGTCAGATCATTGTAATATTCAAACTGGAGGGATA----AAGC----------AAGGTT-A-GCT---------------------------------------------------------------ATAAGAATCTT------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------TTAAGA------------------------AAG-TTT-----------------------TATCTCACCTGTCTTTCGCCCATTTGATGGGCC------TTCTTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
CGAATATATACTTTTTACCGCAATCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
droVir3
CAAATATATATTTCTTGCCGCAATCCTTCATCAACTTCAGAATAACGGGCTTTATATTTTCAATGCCCGTCATATTCGCCAGCTCGTTGTAATAGTCAAACTATAACAAA---------------------------------------------------------------------------------------------------------------------------------TAAGTTATCATAAGCGGG-----------------------ACTTCA-AT------------------------------------------------------------------------------------------------------------------------------------AA------------------TTCGTAA-GCA-----------------------ATGCTCACCTGGCGCTCGCCCATTTGATGGGCC------TTCTTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................AACTTCAGAATAACGGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
CAAATATATATTTCTTGCCACAATCCTTCATTAGCTTTAAAATAACGGGTTTTATATTCTCAATGCCCGTCATATTGGCCAATTCATTATAGTAATCGAACTGTTGGAGATGTGAGATA-----TTATT------------------------------------------ACATTTCAT------------------ATATGTATGTAAGTCAT--------------------------------------------------------------------GTG-AA--------------------------------------------------------------------------------------------------------------------------------GTAT------------------------CAGTATA-----------------------AGTAATACCTGACGTTCGCCCATTTGATGGGCC------TTTTTACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CGAAAATATATTTCTTACCGCAATCCTTCATCAACTTTAAAATAACCGGCTTAATATTCTCAATGCCCGTCATATTTGCCAGCTCATTGTAATAATCAAACTAGAAAAATG----TAAG----------AGGAG----TTT-------------AA---------------------------------------------------------TTGGA-----TT------------------------------T-----------------------TGT-------------------------------------------------------------------------------------------------------------------------------------TTAAATAT-------------------ATGTAT-ACC----------------------ATTTCCCACCTGTCGTTCGCCCATTTGATGGGCC------TTCTTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:53 AM