ID:

dsi_8368

 Coordinate:

2l:183485-183634 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.8 -17.8 -17.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAGGCAAGGAATCAAGCCCTGACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAGTAGGAACTGGTCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAAGAGCACAAGCCCAAGACAATCTCATCTGTTGCCCCCATTGCTGAGGACCAACGACCACGACTTATCCTTACCATTAATAAAACGCAACCCTCGATTAAGAATATTAGTGAAATGGAGCAAACAATTCAGCAGCAACAACAGCAGC
***************************************************************.....((((((..((...))..))).)))...((.((((....((((.........((((........))))........))))....)))).))...***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
.............................................................................................................................................ATTGCTGAGGACCAACGACC......................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GAGGACCAACGACCACGA..................................................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................CAGGCTCAAGAACAAAACCAAGT........................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGAGGACCAACGACCACGACTTATC............................................................................... 25 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
...............................................................ACTGGTCAGGATATCTACGA....................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0
...................................................AGTCAAGTAGGAACTGGTCAGGATATC............................................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2
.....................................................................................TCCATGAAGACGGTGGTGAAGAGCACA.......................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0
....................................................................................TTCCATGAAGACGGTGGTGAAGAGCA............................................................................................................................................ 26 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
...............................................CGCAAGTCAAGTAGGAACT........................................................................................................................................................................................ 19 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................TCAAGTAGGAACTGG...................................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................CTGACTCAGGCTCAAGAACAAAACC............................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................ACTGGTCAGGATATCTAC......................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TTCCATGAAGACGGTGGTGAAGAGCAC........................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGGAGCAAACAATTCAGC............... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................AAGTCGCAAGTCAAGTAGGAACTGG...................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................CGCAAGTCAAGTAGGAAC......................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATTGCTGAGGACCAACGACCAC....................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TTCCATGAAGACGGTGGTGAAGA............................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................GCTGAGGACCAACGACCAC....................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................CAAAACCAAGTCGCAAGT.................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................AAACCAAGTCGCAAGTCAAGTAGGAAC......................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................CAGGCTCAAGAACAAAAC................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................AACAAAACCAAGTCGCAAGGC................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................GTCAAGTAGGAACTGGTCAGGATATCTA.......................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................GAGGACCAACGACCACGAC.................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAGAATATTAGTGAAATGGAG............................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................TGACTCAGGCTCAAGA....................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................GGGCAGGATATCTACGAGTTCCATG............................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................ACGAGTTGCATGAAGA........................................................................................................................................................... 16 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................CAGGCTCAAGAACAAAACCAAGTC.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GAATATTAGTGAAATGGAGC........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................GCTGAGGACCAACGACC......................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TACGAGTTGCATGAAGA........................................................................................................................................................... 17 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................GAGGACCAACGACCACGACTTATCC.............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................GTCGCAAGTCAAGTAGGAACT........................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TGTTGCCCCCATTGCTGAGGAC................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGCTGAGGACCAACGACCACGACT................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TGGTCAGGATATCTACGAGTT.................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AGTAGGAACTGGTCAGGATATCTA.......................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................CAAAACCAAGTCGCAAGTCAAGTAG............................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................GCAAGTCAAGTAGGAACT........................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GAGGACTAACGACCACGAC.................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................CCATGAAGACGGTGGTGAAGAGC............................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAGAATATTAGTGAAATGGAGC........................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AACGACCACGACTTATCCT............................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................TGACTCAGGCTCAAGAACAAAA................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................ATTGCTGAGGACCAACGACCACGACT................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTAGTGAAATGGGGCAAACA...................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................CAAGTCAAGTAGGAACTGGTCAGGA................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................TACGAGTTGCATGAA............................................................................................................................................................. 15 1 7 0.86 6 0 0 0 0 0 6 0 0 0 0 0 0
.........................................................................ATACCTACGAGTTGCATG............................................................................................................................................................... 18 2 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0 0
................................................................................CATGTTCCATGAAGACGGTA...................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................TGGTTAGGATATCTA.......................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TCTTAAGAATATTAGTGA................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................CTATTCCCATGAAGACGGT....................................................................................................................................................... 19 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................TACGAGTTGCATGGAGA........................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................TCCCATGAAGACGGTGA..................................................................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................GACCTCGTCAGGATAGCT........................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
......AGGAATCAAGGCGTGA.................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTCCGTTCCTTAGTTCGGGACTGAGTCCGAGTTCTTGTTTTGGTTCAGCGTTCAGTTCATCCTTGACCAGTCCTATAGATGCTCAAGGTACTTCTGCCACCACTTCTCGTGTTCGGGTTCTGTTAGAGTAGACAACGGGGGTAACGACTCCTGGTTGCTGGTGCTGAATAGGAATGGTAATTATTTTGCGTTGGGAGCTAATTCTTATAATCACTTTACCTCGTTTGTTAAGTCGTCGTTGTTGTCGTCG
*****************************************************************************************.....((((((..((...))..))).)))...((.((((....((((.........((((........))))........))))....)))).))...*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M025
embryo
...........................................................................................................CGTGTTCGGGTTCTGTTAGAGT......................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................AAGGTACTTCTGCCATG..................................................................................................................................................... 17 2 4 1.00 4 4 0 0 0 0 0 0
.............................................................................................................TGTTCGGGTTCTGTTAGAGTA........................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................TGGATGCTGGTGCTTTATAGG.............................................................................. 21 3 3 0.33 1 0 0 0 1 0 0 0
............................................................................AGATGCTCAACGTAC............................................................................................................................................................... 15 1 15 0.33 5 5 0 0 0 0 0 0
....................................................................................................CAACTCTCGTGTTCGGGTTCG................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 1 0
........................................................................CTATGGATGCTCAACGTA................................................................................................................................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0
...................................................................CCGTCCTCTAGATGTTCAAGGT................................................................................................................................................................. 22 3 4 0.25 1 0 0 1 0 0 0 0
.............................................CGGCGTTCCGTTCATCCT........................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0 0
......................................................................................................................................................................AATAGGAATGGCAATTATT................................................................. 19 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................CCTCTGTTAAGTCGTCTTTGT........ 21 3 5 0.20 1 0 0 1 0 0 0 0
.................................................................................................................................................GACTCTTTGTTGCTGGTG....................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................AGCGTTGGGAGCTAAGGCTT............................................ 20 3 7 0.14 1 0 0 1 0 0 0 0
...........................................................................TAGATGCTCAACGTAC............................................................................................................................................................... 16 1 7 0.14 1 1 0 0 0 0 0 0
........................................................................CTTTGGATGCTCAACGTAC............................................................................................................................................................... 19 3 18 0.11 2 2 0 0 0 0 0 0
.....................................................................................AGGTACTTCTGCCATG..................................................................................................................................................... 16 2 20 0.10 2 2 0 0 0 0 0 0
..............................................................................................................................................................................................CTGGGCGCTAATTCTT............................................ 16 2 17 0.06 1 0 0 0 0 1 0 0
..........TAGTACAGGCCTGAGTCCG............................................................................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................................TCGTTGTTGTCGTCG 15 0 20 0.05 1 1 0 0 0 0 0 0
....................................................................................AAGGTACTTCTGCCATGC.................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:183435-183684 + dsi_8368 AAGGCAAGGAATCAAGCCCTGACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGTCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCACAA------GCCCAAGACAATC---TCATCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTTATCCTTACCATTAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGC
droSec2 scaffold_14:195387-195637 + AAGGCGAGGAATCAAGCCCTGACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGTCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCACAA------GCCCAAGACAATC---TCATCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTTATCCTTACCATTAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGGGAGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGC
dm3 chr2L:197379-197628 + AAGGCGAGGAATCAAGCCCTAACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGCCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCCCAA------GCCCAAGACAATA---TCATCTGTT---------------------------------------------------------GCCCCCAGTGCTGAGGACCAACGACCACGACTTATTCTTACCATCAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGC
droEre2 scaffold_4929:242608-242851 + AAAGCCAGGAATCAAGCCCTGACCCAGGCGCAAGGACAAAATCAAGTCGCAAGTCAAT---TAGGAACTGGTCAGGATATCTACGAGTTTCATGAAGACGGTGGTGAA---GAGCCCAA------GACCAAGACAATC---TCTTCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTCATCCTTACCATCAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CGATGCAG------------------------------CAG------------------------------CAGCAGC
droYak3 2L:187926-187960 + AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG-AGCAAA---------CAATGCAG------------------------------CAG---C------AGCA---------------ACAGCAGC
droEug1 scf7180000409154:185193-185439 + AAGGCTAGAAATCAAGCATTGACTCAGGCGCAAGCCCAAAATCAAGTCGCGAGTCAAG---TTGGAACTAGTCAGGATATCTACGAATTTCATGATGACGCTGGTGAA---GAGCCAAA------GGCCAAATCTAAT---TCTACTATA---------------------------------------------------------ACTCCACCTACAGAGGACCAGCGACCAAGACTTATTCTCACCATCAACAAAACCCAACCCTCGATAAAGAATAGTA---CTGAACTGG-AACAGC---------CTATGCA---------------------------------A---C------AACA---------------ACTCCAGC
droBia1 scf7180000301547:65130-65388 - AAAGCCAGAAATCAAGCTATGACTCAAGCGCAAGCCCAACATCAAGTCGGAAGTCAAG---TGGGAACTAGTCAGGATATCTACGAATTCCATGAAGACACTGGTGAA---GAACCAAA------GGGCAAGACAAAT---TCGGCTATT---------------------------------------------------------GCGCCACCTGCAGACGATCAGCGACCCCGGCTGATTCTCACCATCAATAAAACCCAACCATCGATTAAGAACAGTA---TTGAAGTTG-AGCAAC---------CTGTGCAA---------------------CAACAGCAACAA---C------AACA---------------ACAGCATC
droTak1 scf7180000413017:345361-345604 - AAGGCAAGAAACCAGGCCTTGACTCAGGCGCAAGCTCAGCAGCAGGTCGCCAGTCAAG---TGGGAACCAGTCAGGATATCTACGAGTTCCACGAAGACGCCGGCGAA---GAGCCCAA------GGGCAAAGCCAAT---TCTACGGTT---------------------------------------------------------GCGCCACCAGCAGAAGATCAGCGACCACGACTCATTCTCACCATCAATAAGACGCAACCTTCAATTAAGAACAGTG---CCGAAGCGG-AGCAAC---------CTATGC---------------------------------------------CACA---------------ACAACAGC
droEle1 scf7180000490216:120818-121061 + AAGGCCAGAAATCAGGCTCTGACTCAGGCGCAAGTCCAACACCAAGCCGCAAGTCAA------GGAACCAGTCAGGATATCTATGAATTTCATGAGGACGCGGGTGAA---GAGCCCAA------AGGAAAGGCTAAC---TCAAGTGTT---------------------------------------------------------GCGCCACCTGCAGACGACCAAAGACCACGTCTCATTCTCACCATCAACAAAACGCAACCTTCGATTAAGAACAGCA---GTGAAATGG-AGCAGC---------CTATGCA---------------------------------T---C------AACA---------------TCAAAATC
droRho1 scf7180000779252:218769-219015 + AAGGCCAGAAATCAAGCCTTGACTCAGGCGCAAGCCCAACAACAAGTCGCTAGTCAAG---TTGGAAACAGTCAGGATATCTATGAGTTTCATGAAGACGCGGGCGAA---GAGCCCAA------AGGCAAGGCTAAC---TCAAATGTT---------------------------------------------------------GCGCCACCTGCAGATGACCAACGACCACGTCTCATTCTCACCATCAATAAAGCGCAACCCTCAATTAAGAACAACA---GTGAAATGG-AACATC---------CAATGCA---------------------------------G---C------AACA---------------ACAGCTGC
droFic1 scf7180000453904:460968-461217 + AAGGCCAGGAACCAGGCGCTGACTCAGGCGCAAGCCCAGCACCAAGCTGCCAGTCAACAAGTTGGAAGCAGCCAGGACATCTACGAGTTCCACGAGGACGCGGGGGAG---GAGCCCAA------GGGTAAGGCAAAC---TCCGCTGCC---------------------------------------------------------GCTCCACCTGCCGAGGACCAGCGGCCACGACTCATCCTGACCATCAACAAGACCCAGCCATCGATCAAGAACAGCA---GCGAGGTGG-AGCAGG---------CCATGCA---------------------------------G---C------CCCA---------------GCAGCAGC
droKik1 scf7180000302273:161872-162121 + AAGGCCAGGAATCAGGCCTTGACGCAGGCTCAGGCGCAGGCTCAAGCACAGAATCCAGTTCCTGGCTCCAACCAGGACATTTACGAGTTCCACGAGGATGCCGGCGAA---GAGCCCAA------GGCCAAGGCTAAC---GCTAATGCT---------------------------------------------------------GGAGCACCCACCGAGGATCAGCGACCACGTCTCATTATGACCATCAACAAGGCGCAGACCTCGATCAAGAACAGCA---GCGAGATGG-AGCAGC---------CTCAG---------------------------------CAG---T------CAGG---------------TCAGACAC
droAna3 scaffold_12943:4200075-4200318 - AAGGCAATCAACCAGGCCATCACCCAGGTGCAGGAGCAGA------TGGGCAGC--A----GCAGCAGCAGCCAGGACATCTACGAGTTCCACGAGGATGCGGGCGAT---GAGCCCG---GAAAGGCCAAGGCACCGGCCTCCAATGTG---------------------------------------------------------ATGGCAGCTGGCGAGGACCAGCGCCCGCGTCTCATCCTGACCATCAACAAGACGCAGCCCTCGATCAAAACCAGCGCTCCTGAACCGG-AGCAGG---------CT----GG------------------------------CAG---T------GACG---------------T--GTCCC
droBip1 scf7180000395973:419850-420093 - AAGGCCATCAACCAGGTCATCACGCAAGTACAGGAGCAGA--TGAGCGGCA----------GCAGCAGCAGCCAGGACATCTACGAGTTCCACGAGGATGCGGGCGAT---GAGCCCG---GAAAGGGCAAGGCAGCGGCCTCCAGCGCC---------------------------------------------------------ATGGCGCCTGGCGAGGACCAGCGCCCGCGGCTCATACTGACCATCAACAAGACGCAGCCCTCCATCAAGAACAGCGCCACCGATCCCG-AGCAGG---------CT----GG------------------------------CAG---T------GACG---------------T--GTCCC
dp5 4_group1:4421074-4421296 - AAGGCCAGGAATCAGGCGCTGACTCAGGCGCAAGCCT------------------------------CCAACCAGGACGTTTATGAGTTCAACGATGACTCCGGCGAGGCTGAGCCCAA------GGTCAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGAGGATCAGCGGCCGCGTCTCATTCTGACGATCAACAAGTCGCAGCCGTCGATCAGGAGCAGCA---CCGACGTGG-AGCCAC---------CAGCCGAG------------------------------GCA---C------AGGC---------------ACAACCAC
droPer2 scaffold_5:789396-789642 + AAGGCCAGGAATCAGGCGCTGACTCAGGCGCAAGCCT------------------------------CCAACCAGGACGTTTATGAGTTCAACGATGACTCCGGCGAGGCTGAGCCCAA------GGTCAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGAGGATCAGCGGCCGCGTCTCATTCTGACAATCAACAAGTCGCAGCCGTCGATCAGGAGCAGCA---CCGACGTGG-AGCCAC---------CAGCAGAG------------------------------GCACAGGCACAGCCACAACCACAATCCCTGTCACAGCCAC
droWil2 scf2_1100000004516:2328729-2328973 + AAGGCTAGAAATCAAGCCCTGGCCCAAGCTCAGT---------------------------------CCAATCAAGATGTCTACGAATTCCGTGACGATTCTGGTGAA---GAGCCCAAGGGAGGAGTTAAGGCAACA---ACAGCCACTT------------------------------------------CT---TCT------GCTGTAGCAAGCGATGACCAGCGACCACGTCTCATTCTGACCATTAATAAAGTGCAGCCGGCTATAAAGAATAACAGTGGCGAAACTG-AGCCTCCATC-----CATATCAG------------------------------CAG---C------TCCATCGCCA---------GTTACTGT
droVir3 scaffold_12963:8909364-8909619 - AAGGCACGGAATCAAGCGTTGACACAAGCGAGC------------------------------GGCTCCAGTCAGGATATTTACGAGTTCCATGACGATGTGGGCGATACGGAGCCAAA------GGTCAAGTTAACT---GCAGTTACAA------------------------------------------AC---ACAGCAGCAGCAGCTGCCGCAGATGACACGAGACCGCGGCTGATTCTAACAATCAACAAG------------CTTAAGAACAGCA---GCGAACTGG-AGAGCC---------AAGCCGAGGTGCCACATGTGCAAACGCAGCAGCAGCAGCAG---C------AACA---------------ACAACAAC
droMoj3 scaffold_6500:2422794-2423028 + AAGGCCAGGAATCAGGCATTGACACAAGCCAG------------------------------CGGATCCAGTCAGGATATATACGAGTTCCATGACGATGTTGGCGATGCTGAGCCAAA------GATAAAGGCAACT---CCAGTTGTTG------------------------------------------CC---ACAGCGGCAGCACCTGCTGCCGATGACCCGCGACCGCGACTCATACTGACCATCAACAAG------------CTGAAGAATAGCA---GCGAACTGG-AGAGTCAAGCGGAAGCGACGCAG------------------------------CCA---C------AACA---------------ACAACAGC
droGri2 scaffold_15252:12878912-12879188 + AAGGCACGCAATCAGGCTTTGACGCAAAC--------------AAGCG-------------GCGGCTCCAGCGAGGACATTTACGAGTTTAATGATGATGCATGCGATGCAGAGCCCAA------GGTTAAGGCAACC---ACAATCAATACTGCACCATCAGCAACAACAGTAACTGCAGCAACCACAACAAATGCAGCAGCAGCGGCAGCTGCTGGTGAGGAAACGCGTCCACGTCTCATACTAACTATCAACAAG------------CTCAAGAACAGCA---GCGAACTTG-AGGCACAAA------CAGAGCAA------------------------------CAG---T------CGCA---------------GCAGCAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGGCAAGGAATCAAGCCCTGACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGTCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCACAA------GCCCAAGACAATC---TCATCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTTATCCTTACCATTAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................ATTGCTGAGGACCAACGACC............................................................................................................................................................2012.00211000000000000000
...........................................................................................................................................................................................................................GAGGACCAACGACCACGA........................................................................................................................................................1812.00200200000000000000
........................CAGGCTCAAGAACAAAACCAAGT......................................................................................................................................................................................................................................................................................................................................................2312.00202000000000000000
..........................................................................................................................................................................................................................TGAGGACCAACGACCACGACTTATC..................................................................................................................................................2512.00210000001000000000
..................................................................ACTGGTCAGGATATCTACGA...............................................................................................................................................................................................................................................................................................................2012.00200010001000000000
...................................................AGTCAAG---TAGGAACTGGTCAGGATATC....................................................................................................................................................................................................................................................................................................................2712.00200000000000002000
........................................................................................TCCATGAAGACGGTGGTGAA---GAGCACA...............................................................................................................................................................................................................................................................................2712.00200000000000020000
.......................................................................................TTCCATGAAGACGGTGGTGAA---GAGCA.................................................................................................................................................................................................................................................................................2612.00200000000020000000
...............................................CGCAAGTCAAG---TAGGAACT................................................................................................................................................................................................................................................................................................................................1912.00201100000000000000
.....................................................TCAAG---TAGGAACTGG..............................................................................................................................................................................................................................................................................................................................1511.00100000000010000000
..................CTGACTCAGGCTCAAGAACAAAACC..........................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
..................................................................ACTGGTCAGGATATCTAC.................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.......................................................................................TTCCATGAAGACGGTGGTGAA---GAGCAC................................................................................................................................................................................................................................................................................2711.00100000001000000000
...................................................................................................................................................................................................................................................................................................ATGG-AGCAAA---------CAATTCAG------------------------------C.......................................1911.00100000000000100000
...........................................AAGTCGCAAGTCAAG---TAGGAACTGG..............................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
...............................................CGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................ATTGCTGAGGACCAACGACCAC..........................................................................................................................................................2211.00100100000000000000
.......................................................................................TTCCATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................2311.00100010000000000000
........................................................................................................................................................................................................................GCTGAGGACCAACGACCAC..........................................................................................................................................................1911.00110000000000000000
....................................CAAAACCAAGTCGCAAGT...............................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................................AAACCAAGTCGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
........................CAGGCTCAAGAACAAAAC...........................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................................................GTCAAG---TAGGAACTGGTCAGGATATCTA..................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................................................................................................................................................................................GAGGACCAACGACCACGAC.......................................................................................................................................................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................AAGAATATTA---GTGAAATGG-AG...........................................................................................2111.00100000010000000000
...................TGACTCAGGCTCAAGA..................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
........................CAGGCTCAAGAACAAAACCAAGTC.....................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...................................................................................................................................................................................................................................................................................GAATATTA---GTGAAATGG-AGC..........................................................................................2011.00100000000000100000
........................................................................................................................................................................................................................GCTGAGGACCAACGACC............................................................................................................................................................1711.00100000010000000000
...........................................................................................................................................................................................................................GAGGACCAACGACCACGACTTATCC.................................................................................................................................................2511.00101000000000000000
.............................................GTCGCAAGTCAAG---TAGGAACT................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................................................................................................................................................TGTT---------------------------------------------------------GCCCCCATTGCTGAGGAC....................................................................................................................................................................2211.00110000000000000000
......................................................................................................................................................................................................................TTGCTGAGGACCAACGACCACGACT......................................................................................................................................................2511.00100000010000000000
....................................................................TGGTCAGGATATCTACGAGTT............................................................................................................................................................................................................................................................................................................2111.00100000010000000000
........................................................AG---TAGGAACTGGTCAGGATATCTA..................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
....................................CAAAACCAAGTCGCAAGTCAAG---TAG.....................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
................................................GCAAGTCAAG---TAGGAACT................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.........................................................................................CCATGAAGACGGTGGTGAA---GAGC..................................................................................................................................................................................................................................................................................2311.00100100000000000000
.................................................................................................................................................................................................................................................................................AAGAATATTA---GTGAAATGG-AGC..........................................................................................2211.00101000000000000000
..................................................................................................................................................................................................................................AACGACCACGACTTATCCT................................................................................................................................................1911.00100000000001000000
...................TGACTCAGGCTCAAGAACAAAA............................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
.....................................................................................................................................................................................................................ATTGCTGAGGACCAACGACCACGACT......................................................................................................................................................2611.00110000000000000000
.................................................CAAGTCAAG---TAGGAACTGGTCAGGA........................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
droSec2
AAGGCGAGGAATCAAGCCCTGACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGTCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCACAA------GCCCAAGACAATC---TCATCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTTATCCTTACCATTAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGGGAGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................CGCAAGTCAAG---TAGGAACTG...............................................................................................................................................................................................................................................................................................................................2012.0020200
................................AGAACAAAACCAAGTCGCAAGTCA.............................................................................................................................................................................................................................................................................................................................................2411.0010010
.....................................................................................AGTTCCATGAAGACGGTGGT............................................................................................................................................................................................................................................................................................2011.0010010
.......................................................AAG---TAGGAACTGGTCAGG.........................................................................................................................................................................................................................................................................................................................1811.0011000
................................................................................CTACGAGTTCCATGAAGA...................................................................................................................................................................................................................................................................................................1811.0010010
..............................................................................................................................................................................................................................................................................ATTAAGAATATTA---GTGAAATGGAGC...........................................................................................2511.0010010
...............................................................................................................................................................................................................................................................................TTAAGAATATTA---GTGAAATGG..............................................................................................2111.0011000
........................................................................................TCCATGAAGACGGTGGTGAA---GAG...................................................................................................................................................................................................................................................................................2311.0011000
..................................................................ACTGGTCAGGATATCTACGAGTT............................................................................................................................................................................................................................................................................................................2311.0010010
..GGCGAGGAATCAAGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.......................................................................................................GTGAA---GAGCACAA------GCCCAAGACAAT............................................................................................................................................................................................................................................................2511.0010100
...........................................................................................ATGAAGACGGTGGTGAA---G.....................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................TGAAGACGGTGGTGAA---GAGCACAA------........................................................................................................................................................................................................................................................................2411.0010010
.........AATCAAGCCCTGACTCAGGC........................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..........................................................................................CATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................TGAAGACGGTGGTGAA---GAG...................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................AGACGGTGGTGAA---GAGCA.................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................GTGGTGAA---GAGCACAA------GCCCAAG.................................................................................................................................................................................................................................................................2311.0011000
..................................................................................................CGGTGGTGAA---GAGCACAA------GCC.....................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................ATCTGTT---------------------------------------------------------GCCCCCATTGCTGAG.......................................................................................................................................................................2211.0010010
..................................................................................ACGAGTTCCATGAAGACG.................................................................................................................................................................................................................................................................................................1811.0010010
................................................................................................GACGGTGGTGAA---GAGCACA...............................................................................................................................................................................................................................................................................1911.0010100
............................................................................ATATCTACGAGTTCCATGAAGACG.................................................................................................................................................................................................................................................................................................2411.0010100
...................................................................................................................ACAA------GCCCAAGACAATC---T.......................................................................................................................................................................................................................................................1811.0010010
....................GACTCAGGCTCAAGAACAAAACCA.........................................................................................................................................................................................................................................................................................................................................................2411.0011000
............................CTCAAGAACAAAACCAAGTCGCAAGTC..............................................................................................................................................................................................................................................................................................................................................2711.0011000
.................................................................................................................................................................................................................................................................AACGCAACCCTCGATTAAGAATATT...........................................................................................................2511.0010010
..............................................................AGGAACTGGTCAGGATATCTACGA...............................................................................................................................................................................................................................................................................................................2411.0011000
dm3
AAGGCGAGGAATCAAGCCCTAACTCAGGCTCAAGAACAAAACCAAGTCGCAAGTCAAG---TAGGAACTGGCCAGGATATCTACGAGTTCCATGAAGACGGTGGTGAA---GAGCCCAA------GCCCAAGACAATA---TCATCTGTT---------------------------------------------------------GCCCCCAGTGCTGAGGACCAACGACCACGACTTATTCTTACCATCAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------AACA---------------ACAGCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................TAGGAACTGGCCAGGATATCTACGAGT.............................................................................................................................................................................................................................................................................................................27116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000002310800000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ATGAAGACGGTGGTGAA---GAGC..................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000002000
...............................................CGCAAGTCAAG---TAGGAACTGGC.............................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CAAGTCGCAAGTCAAG---TAGGA...................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TATCTACGAGTTCCATGAAGACGGT...............................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100001000
............................................AGTCGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AACGACCACGACTTATTCTTACCATC.........................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................TCTACGAGTTCCATGAAGACGGTGGT............................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000001000000
................................................................................................................................................................................................................................CCAACGACCACGACTTATTCTTACC............................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGAAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------...........................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CTACGAGTTCCATGAAGACGGT...............................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000001000000
..........................GGCTCAAGAACAAAACCAAGT......................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AACCAAGTCGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGTGCTGAGGACCAACGACCAC..........................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CTACGAGTTCCATGAAGACGG................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................CCACGACTTATTCTTACCATC.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACGCAACCCTCGATTAAGAA...............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAAGAATATTA---GTGAAATGG-AGCAAA---------..............................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAACCAAGTCGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GAA---GAGCCCAA------GCCCAAGACA..............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TGAGGACCAACGACCACGACTTATTC.................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ACGAGTTCCATGAAGACGGTG..............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................AGTTCCATGAAGACGGTGG.............................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................TACGAGTTCCATGAAGACGGTGGTGA..........................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GATATCTACGAGTTCCATGAAGACGGT...............................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................AAG---TAGGAACTGGCCAGGATATCTA..................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.............................TCAAGAACAAAACCAAGTCGCA..................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GAGGACCAACGACCACGACT......................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGG-AGCAAA---------CAATTCAG------------------------------CAG---C------...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................GAAGACGGTGGTGAA---GAGCC.................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AATATTA---GTGAAATGG-AGCA.........................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000
............................................................................ATATCTACGAGTTCCATGAAG....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000
..............................................................AGGAACTGGCCAGGATATCTACGAGT.............................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................GAAGACGGTGGTGAA---GAGC..................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000
...............................AAGAACAAAACCAAGTCGCAAGTC..............................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAGGCTCAAGAACAAAACCAAGTCGC...................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GAATATTA---GTGAAATGG-AGCA.........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................TCAAGAACAAAACCAAGTCGCAAG................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCAACGACCACGACTTATTCTTAC.............................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CATGAAGACGGTGGTGAA---......................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................ATGAAGACGGTGGTGAA---GAGCCC................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GAGTTCCATGAAGACGGTGGTGAA---G.....................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................AAGTCGCAAGTCAAG---TAGGA...................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
.................................................CAAGTCAAG---TAGGAACTGGCC............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------AAC........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAACTCAGGCTCAAGAACAAAACCA.........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................AACTCAGGCTCAAGAACAAAACCAAG.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GAGGACCAACGACCACGACTT.....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCGCAAGTCAAG---TAGGAACTG...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................CAGGCTCAAGAACAAAACC..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................CTACGAGTTCCATGAAGACG.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CAAGTCGCAAGTCAAG---TAGGAAC.................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GTTCCATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................TGGCCAGGATATCTACGAGT.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAAGAATATTA---GTGAAATGG-.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TACCATCAATAAAACGCAACCCTCGAT.....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGTGCTGAGGACCAACGACC............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTA---GTGAAATGG-AGCAAA---------C.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CGCAAGTCAAG---TAGGAACTGGCCAG..........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TGTT---------------------------------------------------------GCCCCCAGTGCTGAGGA.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TAAGAATATTA---GTGAAATGG-AA...........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................TTCCATGAAGACGGTGGTGT..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................GTTCCATGAAGACGGTGGTGAA---GAGC..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTA---GTGAAATGG-AGCAAA---------CA............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AAATGG-AGCAAA---------CAATTCAG------------------------------CAG---C------A..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................GTT---------------------------------------------------------GCCCCCAGTGCTGAGGAC....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................CAGGATATCTACGAGTTCCATGAAG....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGCTCAAGAACAAAACCAAGTCGCA..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AAGTCGCAAGTCAAG---TAGGAA..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................................................................AAGACGGTGGTGAA---GAGCCCA...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GAAATGG-AGCAAA---------CAATTCAG------------------------------C.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................TCAAG---TAGGAACTGGCCAGGATATCT...................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
AAAGCCAGGAATCAAGCCCTGACCCAGGCGCAAGGACAAAATCAAGTCGCAAGTCAAT---TAGGAACTGGTCAGGATATCTACGAGTTTCATGAAGACGGTGGTGAA---GAGCCCAA------GACCAAGACAATC---TCTTCTGTT---------------------------------------------------------GCCCCCATTGCTGAGGACCAACGACCACGACTCATCCTTACCATCAATAAAACGCAACCCTCGATTAAGAATATTA---GTGAAATGG-AGCAAA---------CGATGCAG------------------------------CAG------------------------------CAGCAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................ATATTA---GTGAAATGG-AGCA.........................................................................................1912.0020000020
................................................................................................................................................................................................................................................................................................GAAATGG-AGCAAA---------CGATGCAG------------------------------C.......................................2212.0020001100
........................................................................................TTCATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................2212.0020001010
..........................................................................................................................................................................................................................................................................................................CAAA---------CGATGCAG------------------------------CAG------------------------------CAGCAG.2111.0011000000
.............AAGCCCTGACCCAGGCGCAAGGAC................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
........................................................................................TTCATGAAGACGGTGGTGAA---G.....................................................................................................................................................................................................................................................................................2111.0010001000
..............................................................................ATCTACGAGTTTCATGAAGACG.................................................................................................................................................................................................................................................................................................2211.0010000100
...........................................................................................................................................................................................................................................................................................................AAA---------CGATGCAG------------------------------CAG------------------------------CAGCAGC2111.0010100000
.............................................................................................GAAGACGGTGGTGAA---GAGCCCAA------G.......................................................................................................................................................................................................................................................................2411.0010000100
...............................................CGCAAGTCAAT---TAGGAACT................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................T---------------------------------------------------------GCCCCCATTGCTGAGGACCAAC................................................................................................................................................................2311.0010000010
...................................................AGTCAAT---TAGGAACTGGT.............................................................................................................................................................................................................................................................................................................................1811.0010000010
............................................................................................................................................................................................................................................................................................................AA---------CGATGCAG------------------------------CAG------------------------------CAGCAGC2011.0010001000
....................................................................................................................................................................................................................................................................................AATATTA---GTGAAATGG-AGCA.........................................................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................ATTA---GTGAAATGG-AGCAAA---------CGATGC........................................................................2511.0010000100
........................................................................................................................................................................................................................................................................CCCTCGATTAAGAATATTA---GT.....................................................................................................2111.0010000100
..................................................................................................................................................................................................................CCCATTGCTGAGGACCAACGA..............................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................GTGAAATGG-AGCAAA---------CGAT..........................................................................1911.0010000100
..................................................................ACTGGTCAGGATATCTACGAGTTT...........................................................................................................................................................................................................................................................................................................2411.0010000010
..........................................................................................CATGAAGACGGTGGTGAA---GA....................................................................................................................................................................................................................................................................................2011.0010000100
.............................................................................................................................................................................................................................GGACCAACGACCACGACTCATC..................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................CGACTCATCCTTACCATCAATAAAACGC...............................................................................................................................2811.0010000100
............................................................................ATATCTACGAGTTTCATGA......................................................................................................................................................................................................................................................................................................1911.0010000100
................................................................................................GACGGTGGTGAA---GAGCCCA...............................................................................................................................................................................................................................................................................1911.0010000100
.........AATCAAGCCCTGACCCAGGCGCAAGGAC................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
...............................................CGCAAGTCAAT---TAGGAACTGGTCAGGA........................................................................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................................................................................AATATTA---GTGAAATGG-AGCAAA---------CGATGC........................................................................2811.0010000100
.............................GCAAGGACAAAATCAAGT......................................................................................................................................................................................................................................................................................................................................................1811.0010000010
................................................GCAAGTCAAT---TAGGAACTGGTCAGGAT.......................................................................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................................................................................AATATTA---GTGAAATGG-AG...........................................................................................1811.0010000100
droYak3
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG-AGCAAA---------CAATGCAG------------------------------CAG---C------AGCA---------------ACAGCAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................GCAG------------------------------CAG---C------AGCA---------------ACAGCAGC20200.05101000000000
droEug1
AAGGCTAGAAATCAAGCATTGACTCAGGCGCAAGCCCAAAATCAAGTCGCGAGTCAAG---TTGGAACTAGTCAGGATATCTACGAATTTCATGATGACGCTGGTGAA---GAGCCAAA------GGCCAAATCTAAT---TCTACTATA---------------------------------------------------------ACTCCACCTACAGAGGACCAGCGACCAAGACTTATTCTCACCATCAACAAAACCCAACCCTCGATAAAGAATAGTA---CTGAACTGG-AACAGC---------CTATGCA---------------------------------A---C------AACA---------------ACTCCAGCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAGCCAGAAATCAAGCTATGACTCAAGCGCAAGCCCAACATCAAGTCGGAAGTCAAG---TGGGAACTAGTCAGGATATCTACGAATTCCATGAAGACACTGGTGAA---GAACCAAA------GGGCAAGACAAAT---TCGGCTATT---------------------------------------------------------GCGCCACCTGCAGACGATCAGCGACCCCGGCTGATTCTCACCATCAATAAAACCCAACCATCGATTAAGAACAGTA---TTGAAGTTG-AGCAAC---------CTGTGCAA---------------------CAACAGCAACAA---C------AACA---------------ACAGCATCSizeHit CountTotal NormTotal
No Reads
droTak1
AAGGCAAGAAACCAGGCCTTGACTCAGGCGCAAGCTCAGCAGCAGGTCGCCAGTCAAG---TGGGAACCAGTCAGGATATCTACGAGTTCCACGAAGACGCCGGCGAA---GAGCCCAA------GGGCAAAGCCAAT---TCTACGGTT---------------------------------------------------------GCGCCACCAGCAGAAGATCAGCGACCACGACTCATTCTCACCATCAATAAGACGCAACCTTCAATTAAGAACAGTG---CCGAAGCGG-AGCAAC---------CTATGC---------------------------------------------CACA---------------ACAACAGCSizeHit CountTotal NormTotal
No Reads
droEle1
AAGGCCAGAAATCAGGCTCTGACTCAGGCGCAAGTCCAACACCAAGCCGCAAGTCAA------GGAACCAGTCAGGATATCTATGAATTTCATGAGGACGCGGGTGAA---GAGCCCAA------AGGAAAGGCTAAC---TCAAGTGTT---------------------------------------------------------GCGCCACCTGCAGACGACCAAAGACCACGTCTCATTCTCACCATCAACAAAACGCAACCTTCGATTAAGAACAGCA---GTGAAATGG-AGCAGC---------CTATGCA---------------------------------T---C------AACA---------------TCAAAATCSizeHit CountTotal NormTotal
No Reads
droRho1
AAGGCCAGAAATCAAGCCTTGACTCAGGCGCAAGCCCAACAACAAGTCGCTAGTCAAG---TTGGAAACAGTCAGGATATCTATGAGTTTCATGAAGACGCGGGCGAA---GAGCCCAA------AGGCAAGGCTAAC---TCAAATGTT---------------------------------------------------------GCGCCACCTGCAGATGACCAACGACCACGTCTCATTCTCACCATCAATAAAGCGCAACCCTCAATTAAGAACAACA---GTGAAATGG-AACATC---------CAATGCA---------------------------------G---C------AACA---------------ACAGCTGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAGGCCAGGAACCAGGCGCTGACTCAGGCGCAAGCCCAGCACCAAGCTGCCAGTCAACAAGTTGGAAGCAGCCAGGACATCTACGAGTTCCACGAGGACGCGGGGGAG---GAGCCCAA------GGGTAAGGCAAAC---TCCGCTGCC---------------------------------------------------------GCTCCACCTGCCGAGGACCAGCGGCCACGACTCATCCTGACCATCAACAAGACCCAGCCATCGATCAAGAACAGCA---GCGAGGTGG-AGCAGG---------CCATGCA---------------------------------G---C------CCCA---------------GCAGCAGCSizeHit CountTotal NormTotal
No Reads
droKik1
AAGGCCAGGAATCAGGCCTTGACGCAGGCTCAGGCGCAGGCTCAAGCACAGAATCCAGTTCCTGGCTCCAACCAGGACATTTACGAGTTCCACGAGGATGCCGGCGAA---GAGCCCAA------GGCCAAGGCTAAC---GCTAATGCT---------------------------------------------------------GGAGCACCCACCGAGGATCAGCGACCACGTCTCATTATGACCATCAACAAGGCGCAGACCTCGATCAAGAACAGCA---GCGAGATGG-AGCAGC---------CTCAG---------------------------------CAG---T------CAGG---------------TCAGACACSizeHit CountTotal NormTotal
No Reads
droAna3
AAGGCAATCAACCAGGCCATCACCCAGGTGCAGGAGCAGA------TGGGCAGC--A----GCAGCAGCAGCCAGGACATCTACGAGTTCCACGAGGATGCGGGCGAT---GAGCCCG---GAAAGGCCAAGGCACCGGCCTCCAATGTG---------------------------------------------------------ATGGCAGCTGGCGAGGACCAGCGCCCGCGTCTCATCCTGACCATCAACAAGACGCAGCCCTCGATCAAAACCAGCGCTCCTGAACCGG-AGCAGG---------CT----GG------------------------------CAG---T------GACG---------------T--GTCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................AGGTGCAGGAGCAGA------TGGGCAGC--A----G.......................................................................................................................................................................................................................................................................................................................................2512.002000002
.............................GCAGGAGCAGA------TGGGCAGC--A----GCAG....................................................................................................................................................................................................................................................................................................................................2411.001000001
.............................................................................................................................................................................................................................................................ACAAGACGCAGCCCTCGATC....................................................................................................................2011.001010000
................................................GGCAGC--A----GCAGCAGCAGCCAGGAC.......................................................................................................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................G---------------------------------------------------------ATGGCAGCTGGCGAGGACCA..................................................................................................................................................................2111.001100000
..............................................................CAGCAGCAGCCAGGACATCTA..................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................................................................CTCATCCTGACCATCAACAAGACGC...............................................................................................................................2511.001010000
..........................GGTGCAGGAGCAGA------TGGGCAGC--.............................................................................................................................................................................................................................................................................................................................................2211.001100000
............................TGCAGGAGCAGA------TGGGCAGC--A----GC......................................................................................................................................................................................................................................................................................................................................2311.001001000
.......................CCAGGTGCAGGAGCAGA------TGGGCAGC--A----........................................................................................................................................................................................................................................................................................................................................2611.001000001
.....................................................................................AGTTCCACGAGGATGCGGGC............................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................CCACGAGGATGCGGGCGAT---GAGCC.................................................................................................................................................................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................GCAGG---------CT----GG------------------------------CAG---T------GACG---------------T--GTCCC2311.001010000
................................................................GCAGCAGCCAGGACATCTACGAGT.............................................................................................................................................................................................................................................................................................................2411.001010000
............................................................................................................................................CTCCAATGTG---------------------------------------------------------ATGGCAGCTG............................................................................................................................................................................2011.001010000
..............................................TGGGCAGC--A----GCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................2061.006330000
...GCAATCAACCAGGCCATCACCCAGGTGCA.....................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.................................................................................................................................................................................................................................................................................AAAACCAGCGCTCCTGAACC................................................................................................2011.001010000
..........................GGTGCAGGAGCAGA------TGGGCAG................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................................................................................CGATCAAAACCAGCGCTCCT.....................................................................................................2011.001010000
........................................................................CAGGACATCTACGAGTTC...........................................................................................................................................................................................................................................................................................................1811.001010000
....................CACCCAGGTGCAGGAGCAGA------T......................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................GC--A----GCAGCAGCAGCCAGGAC.......................................................................................................................................................................................................................................................................................................................2020.501010000
..............................................TGGGCAGC--A----GCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................1970.292200000
droBip1
AAGGCCATCAACCAGGTCATCACGCAAGTACAGGAGCAGA--TGAGCGGCA----------GCAGCAGCAGCCAGGACATCTACGAGTTCCACGAGGATGCGGGCGAT---GAGCCCG---GAAAGGGCAAGGCAGCGGCCTCCAGCGCC---------------------------------------------------------ATGGCGCCTGGCGAGGACCAGCGCCCGCGGCTCATACTGACCATCAACAAGACGCAGCCCTCCATCAAGAACAGCGCCACCGATCCCG-AGCAGG---------CT----GG------------------------------CAG---T------GACG---------------T--GTCCCSizeHit CountTotal NormTotal
No Reads
dp5
AAGGCCAGGAATCAGGCGCTGACTCAGGCGCAAGCCT------------------------------CCAACCAGGACGTTTATGAGTTCAACGATGACTCCGGCGAGGCTGAGCCCAA------GGTCAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGAGGATCAGCGGCCGCGTCTCATTCTGACGATCAACAAGTCGCAGCCGTCGATCAGGAGCAGCA---CCGACGTGG-AGCCAC---------CAGCCGAG------------------------------GCA---C------AGGC---------------ACAACCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................GGTCAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGC...............................................................................................................................................................................2613.0030000000003
..............................................................................................................TGAGCCCAA------GGTCAAGATTG------CGA....................................................................................................................................................................................................................................................2312.0020200000000
............CAGGCGCTGACTCAGGCGCAAGCCT------------------------------CC................................................................................................................................................................................................................................................................................................................................2712.0020020000000
...............................................................................................................................................................................................................................................................AAGTCGCAGCCGTCGATCAGGAG...............................................................................................................2312.0020000002000
....................................................................................................................................................................................................................GCCAGTGGAGGATCAGCGGCCGC..........................................................................................................................................................2311.0010100000000
...........................................................................................................GGCTGAGCCCAA------GGTCAAGATTG------C......................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................GACGATCAACAAGTCGCAGCCGTCGAT.....................................................................................................................2711.0010100000000
.........................................................................................................................................................................................................................TGGAGGATCAGCGGCCGCGTCT......................................................................................................................................................2211.0010000010000
............................................................................................CGATGACTCCGGCGAGGCTGAGCC.................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................GATCAACAAGTCGCAGCCGT.........................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................AGTCGCAGCCGTCGATCAGGAGCAG............................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................GG-AGCCAC---------CAGCCGAG------------------------------GCA---C------AG.........................2211.0010100000000
......................................................................................GTTCAACGATGACTCCGGCGAGGCT......................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................A------GGTCAAGATTG------CGACTGTG---------------------------------------------------------GT....................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................CGCAGCCGTCGATCAGGAGC..............................................................................................................2011.0010000100000
...........................................................................................ACGATGACTCCGGCGAGGCT......................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................CGATCAGGAGCAGCA---CCGACGT................................................................................................2211.0010100000000
.......................................................................................................................................G------CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGA........................................................................................................................................................................2311.0010100000000
....................................................................................................CCGGCGAGGCTGAGCCCAA------........................................................................................................................................................................................................................................................................1911.0010100000000
...................................CT------------------------------CCAACCAGGACGTTTATGAGTTC...........................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................GACTGTG---------------------------------------------------------GTGCAGCCAGTGGAGGATC...................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................GATCAGGAGCAGCA---CCGACGTGG-A............................................................................................2411.0010100000000
...........................................................................GACGTTTATGAGTTCAACGATGA...................................................................................................................................................................................................................................................................................................2311.0010100000000
....................GACTCAGGCGCAAGCCT------------------------------CCAACCAGGACG......................................................................................................................................................................................................................................................................................................................2911.0010010000000
.........................................................................................................GAGGCTGAGCCCAA------GGTCAAGATTG------C......................................................................................................................................................................................................................................................2611.0010010000000
..........................................................................................................................................................................................................................................................TCAACAAGTCGCAGCCGTCGATCAGGAGC..............................................................................................................2911.0010100000000
droPer2
AAGGCCAGGAATCAGGCGCTGACTCAGGCGCAAGCCT------------------------------CCAACCAGGACGTTTATGAGTTCAACGATGACTCCGGCGAGGCTGAGCCCAA------GGTCAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGAGGATCAGCGGCCGCGTCTCATTCTGACAATCAACAAGTCGCAGCCGTCGATCAGGAGCAGCA---CCGACGTGG-AGCCAC---------CAGCAGAG------------------------------GCACAGGCACAGCCACAACCACAATCCCTGTCACAGCCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................CAAGATTG------CGACTGTG---------------------------------------------------------GT....................................................................................................................................................................................1812.002200000
................................................................................................GACTCCGGCGAGGCTGAGCCCAA------G.......................................................................................................................................................................................................................................................................2412.002200000
................................................................................................................................CAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGC...............................................................................................................................................................................2311.001100000
....................................................................CAACCAGGACGTTTATGA...............................................................................................................................................................................................................................................................................................................1811.001100000
...................................................................................................................................................................................................................................................................CGCAGCCGTCGATCAGGAGCAGC...........................................................................................................2311.001100000
....................................................................................................................................ATTG------CGACTGTG---------------------------------------------------------GTGCAGCCA.............................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................CAGGAGCAGCA---CCGACGT................................................................................................1811.001010000
...............................................................................................................GAGCCCAA------GGTCAAGATTG------.......................................................................................................................................................................................................................................................1911.001100000
.....................ACTCAGGCGCAAGCCT------------------------------CCAACCAG..........................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................GGATCAGCGGCCGCGTCTCATTCTGAC.............................................................................................................................................2711.001010000
................................................................................................................................CAAGATTG------CGACTGTG---------------------------------------------------------GTGCAGCCAGT...........................................................................................................................................................................2711.001100000
........................................................................CAGGACGTTTATGAGTTC...........................................................................................................................................................................................................................................................................................................1811.001100000
.................................................................................................................................................................................................................................CAGCGGCCGCGTCTCATTCTGAC.............................................................................................................................................2311.001100000
................................................................................................................................CAAGATTG------CGACTGTG---------------------------------------------------------GC....................................................................................................................................................................................1811.001100000
..............................................................................................................................................CGACTGTG---------------------------------------------------------GTGCAGCCAGTGGAG.......................................................................................................................................................................2311.001010000
droWil2
AAGGCTAGAAATCAAGCCCTGGCCCAAGCTCAGT---------------------------------CCAATCAAGATGTCTACGAATTCCGTGACGATTCTGGTGAA---GAGCCCAAGGGAGGAGTTAAGGCAACA---ACAGCCACTT------------------------------------------CT---TCT------GCTGTAGCAAGCGATGACCAGCGACCACGTCTCATTCTGACCATTAATAAAGTGCAGCCGGCTATAAAGAATAACAGTGGCGAAACTG-AGCCTCCATC-----CATATCAG------------------------------CAG---C------TCCATCGCCA---------GTTACTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................AATCAAGATGTCTACGAATTCCGT........................................................................................................................................................................................................................................................................................................2413.00301020
..................................................................................................................................................................................................................................................TCTGACCATTAATAAAGTGCAGCCGG.........................................................................................................................2612.00220000
................................................................................................................AGCCCAAGGGAGGAGTTAAGGC...............................................................................................................................................................................................................................................................2212.00200200
.......................................................................................................................................................................................................................................................................................AACAGTGGCGAAACTG-AGCCTCCATC-----C.............................................................................2712.00200020
.........................................................................................................................GAGGAGTTAAGGCAACA---ACAGCC..................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................................................................ATAAAGTGCAGCCGGCTATAAAGA................................................................................................................2411.00100010
................................................................................................................................................................................................................................................................................................GAAACTG-AGCCTCCATC-----CATATC........................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................ATAACAGTGGCGAAACTG-AGCCTCC......................................................................................2511.00100100
......................................................................ATCAAGATGTCTACGAATTCCGTGA......................................................................................................................................................................................................................................................................................................2511.00100010
.........................................................................................................................................................................................................................................................ATTAATAAAGTGCAGCCGGCT.......................................................................................................................2111.00100010
...............................................................................................................................................AGCCACTT------------------------------------------CT---TCT------GCTGTAG...............................................................................................................................................................................2011.00101000
.....................................................................AATCAAGATGTCTACGAATTCCGTGA......................................................................................................................................................................................................................................................................................................2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................AG---C------TCCATCGCCA---------GTTACTGT2111.00110000
.........................................................................AAGATGTCTACGAATTCCGT........................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................................AGCCCAAGGGAGGAGTTAAGG................................................................................................................................................................................................................................................................2111.00100010
......................................................................ATCAAGATGTCTACGAATTCCGT........................................................................................................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................GCAGCCGGCTATAAAGAATAACAGT........................................................................................................2511.00100010
..............................................................................................................................................................................................................................................................................................................................................................AG---C------TCCATCGCCA---------GTTACT..1911.00101000
.............................................................................................GACGATTCTGGTGAA---GAGCCCAAGGGA..........................................................................................................................................................................................................................................................................2711.00100100
....................................................................................................CTGGTGAA---GAGCCCAAGGGA..........................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................AGCCACTT------------------------------------------CT---TCT------GCTGTAGC..............................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................CTCCATC-----CATATCAG------------------------------CAG---C------TCCAT......................2411.00100100
........................................................................................................................................................................................................................................................................................................................ATATCAG------------------------------CAG---C------TCCATCGCC..................2011.00100010
..........................................................................................CGTGACGATTCTGGTGAA---G.....................................................................................................................................................................................................................................................................................1911.00100001
..............................................................................................................................................................................................................................................................................ATAAAGAATAACAGTGGCG....................................................................................................1911.00100010
..................................................................................................................................................................................................T---TCT------GCTGTAGCAAGCGATGACC...................................................................................................................................................................2311.00110000
.........................................................................................................................................A---ACAGCCACTT------------------------------------------CT---TCT------GCTGTAGCAAGC..........................................................................................................................................................................2811.00101000
................................................................................................GATTCTGGTGAA---GAGCCCAAGG............................................................................................................................................................................................................................................................................2211.00100010
..................................................................................................................................................................................................................GTAGCAAGCGATGACCAGCGA..............................................................................................................................................................2111.00100100
...........................................................................GATGTCTACGAATTCCGT........................................................................................................................................................................................................................................................................................................1811.00100001
....................GGCCCAAGCTCAGT---------------------------------CCAATCAAGATGT.....................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
AAGGCACGGAATCAAGCGTTGACACAAGCGAGC------------------------------GGCTCCAGTCAGGATATTTACGAGTTCCATGACGATGTGGGCGATACGGAGCCAAA------GGTCAAGTTAACT---GCAGTTACAA------------------------------------------AC---ACAGCAGCAGCAGCTGCCGCAGATGACACGAGACCGCGGCTGATTCTAACAATCAACAAG------------CTTAAGAACAGCA---GCGAACTGG-AGAGCC---------AAGCCGAGGTGCCACATGTGCAAACGCAGCAGCAGCAGCAG---C------AACA---------------ACAACAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................CTGG-AGAGCC---------AAGCCGAGGTGCCAC...............................................................2513.003000000000000000000000000000000000000000000000000000000000000003
.................GTTGACACAAGCGAGC------------------------------GGCTCCAGT.............................................................................................................................................................................................................................................................................................................................2513.003000000000000000000000000000000000000000000000000000000000000003
.........................................................................................................GATACGGAGCCAAA------GGTCAA..................................................................................................................................................................................................................................................................2012.002000000000100000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................GAGACCGCGGCTGATTCT................................................................................................................................................1812.002000000000000000000000000000000000200000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GCGAACTGG-AGAGCC---------AAGCCGAGGTGC..................................................................2712.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................................................................................................................................................AGCA---GCGAACTGG-AGAGC........................................................................................1812.002100000000000000100000000000000000000000000000000000000000000000
............................................................................................TGACGATGTGGGCGATACG......................................................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................GAACTGG-AGAGCC---------AAGCCGAGG.....................................................................2212.002000100000000000001000000000000000000000000000000000000000000000
.........................................................................................................GATACGGAGCCAAA------GGTCAAGTTAACT---........................................................................................................................................................................................................................................................2712.002000000000000000000000010000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................GAACAGCA---GCGAACTGG-AGAGCC---------..............................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................GTTCCATGACGATGTGGGC............................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................GACGATGTGGGCGATACGGAGCCAAA------G.......................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................CAGGATATTTACGAGTTCC..........................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................AGTCAGGATATTTACGAGTT............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................C---------AAGCCGAGGTGCCACATGTGC.........................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................TACAA------------------------------------------AC---ACAGCAGCAGCAGCT................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AG------------CTTAAGAACAGCA---GCGAACTGG-.............................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GAACAGCA---GCGAACTGG-AGAGC........................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GTCAAGTTAACT---GCAGTTACAA------------------------------------------AC---ACA............................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CAAG------------CTTAAGAACAGCA---GCG....................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AGAGCC---------AAGCCGAGGTGCCAC...............................................................2111.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................TTTACGAGTTCCATGACGATGTGGGC............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................GCAGATGACACGAGACCGCG.........................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................CGATACGGAGCCAAA------GGT.....................................................................................................................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
.....................ACACAAGCGAGC------------------------------GGCTCCAGTCAG..........................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................GATATTTACGAGTTCCATGACGATG.................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000010000
...............................................................................................CGATGTGGGCGATACGGAGCCAAA------G.......................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGTGCAAACGCAGCAGCAGCA.........................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................TACGAGTTCCATGACGATGTGGGC............................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...............................................................GGCTCCAGTCAGGATATTTACGAGTT............................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CAAA------GGTCAAGTTAACT---GCAGT...................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GAACTGG-AGAGCC---------AAGCCGA.......................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............AGCGTTGACACAAGCGAGC------------------------------G.....................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................ATATTTACGAGTTCCATGACGATGTGGG.............................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................CAAGCGAGC------------------------------GGCTCCAGTCAGG.........................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..........ATCAAGCGTTGACACAAGCGAGC------------------------------......................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................CGATGTGGGCGATACGGC....................................................................................................................................................................................................................................................................................1820.501000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCAAACGCAGCAGCAGCAGC.......................................2060.171001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAG---C------AACA---------------ACA.....21200.153003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CAAACGCAGCAGCAGCAGC.......................................1990.111000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAG---C------AACA---------------ACAAC...20200.102000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AACGCAGCAGCAGCAGCAG---C------A..........................21200.051000000000000000000000000000000001000000000000000000000000000000
droMoj3
AAGGCCAGGAATCAGGCATTGACACAAGCCAG------------------------------CGGATCCAGTCAGGATATATACGAGTTCCATGACGATGTTGGCGATGCTGAGCCAAA------GATAAAGGCAACT---CCAGTTGTTG------------------------------------------CC---ACAGCGGCAGCACCTGCTGCCGATGACCCGCGACCGCGACTCATACTGACCATCAACAAG------------CTGAAGAATAGCA---GCGAACTGG-AGAGTCAAGCGGAAGCGACGCAG------------------------------CCA---C------AACA---------------ACAACAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................GACACAAGCCAG------------------------------CGGATCCAGTCAGG.........................................................................................................................................................................................................................................................................................................................2612.002100001
....................GACACAAGCCAG------------------------------CGGATCCAGTCA...........................................................................................................................................................................................................................................................................................................................2411.001000010
.......................................................................................................GCGATGCTGAGCCAAA------GATAAAGGC...............................................................................................................................................................................................................................................................2511.001100000
....................................................................CAGTCAGGATATATACGAGTTCC..........................................................................................................................................................................................................................................................................................................2311.001000001
...................TGACACAAGCCAG------------------------------CGGATCCAGTCAGGA........................................................................................................................................................................................................................................................................................................................2811.001000001
.............................................................................................................................................................................................................................................................................................................CAAGCGGAAGCGACGCAG------------------------------CCA---C------...........................2211.001000001
.........................................................................................................................................................................................................................................GCGACTCATACTGACCATCAACAAG------------CTG....................................................................................................................2811.001100000
......................................................................................GTTCCATGACGATGTTGGCGATGCTGA....................................................................................................................................................................................................................................................................................2711.001100000
............................................................................ATATATACGAGTTCCATGA......................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................TGAAGAATAGCA---GCGAACTGG-.............................................................................................2111.001100000
......................................................................................................................................AACT---CCAGTTGTTG------------------------------------------CC---ACAGCG.........................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................CATACTGACCATCAACAAG------------CT.....................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................TGAAGAATAGCA---GCGAACTG...............................................................................................2011.001000001
..............................................................................ATATACGAGTTCCATGACGAT..................................................................................................................................................................................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................CAACAAG------------CTGAAGAATAGC...........................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................GG-AGAGTCAAGCGGAAGCGACGCAG------------------------------C.......................................2611.001100000
..............................................................................................................................................................................................................................................TCATACTGACCATCAACAAG------------C......................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................G------------CTGAAGAATAGCA---GCGAACTGG-AG...........................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................CGAACTGG-AGAGTCAAGC...................................................................................1811.001000010
..........................................................................................................................................................................................................................................................TCAACAAG------------CTGAAGAATAGCA---GCGAACC................................................................................................2811.001000010
......................................................................................................................................AACT---CCAGTTGTTG------------------------------------------CC---ACAGCGGC.......................................................................................................................................................................................2411.001100000
........................CAAGCCAG------------------------------CGGATCCAGTCAG..........................................................................................................................................................................................................................................................................................................................2111.001000001
..........................AGCCAG------------------------------CGGATCCAGTCA...........................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................GACGATGTTGGCGATGCT......................................................................................................................................................................................................................................................................................1811.001000100
droGri2
AAGGCACGCAATCAGGCTTTGACGCAAAC--------------AAGCG-------------GCGGCTCCAGCGAGGACATTTACGAGTTTAATGATGATGCATGCGATGCAGAGCCCAA------GGTTAAGGCAACC---ACAATCAATACTGCACCATCAGCAACAACAGTAACTGCAGCAACCACAACAAATGCAGCAGCAGCGGCAGCTGCTGGTGAGGAAACGCGTCCACGTCTCATACTAACTATCAACAAG------------CTCAAGAACAGCA---GCGAACTTG-AGGCACAAA------CAGAGCAA------------------------------CAG---T------CGCA---------------GCAGCAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................GCA---GCGAACTTG-AGGCACA......................................................................................1911.00110
................................................................................................................................................................................................................CAGCTGCTGGTGAGGAAACG.................................................................................................................................................................2011.00101
...........................................................................................ATGATGATGCATGCGATGCAGAGCCC................................................................................................................................................................................................................................................................................2611.00110
................................................................................TTACGAGTTTAATGATGATG.................................................................................................................................................................................................................................................................................................2011.00101
................................................................................................................................................................................................................................................................................................................A------CAGAGCAA------------------------------CAG---T------CGCA---------------GCA.....2011.00101
..............................................................................................................................................................................ACTGCAGCAACCACAACAAATGCAGCA............................................................................................................................................................................................2711.00110
...................................................................................................................................................................................................................................................................................GAACAGCA---GCGAACTTG-AGG..........................................................................................2011.00110
............................................AGCG-------------GCGGCTCCAGCGAGGACA......................................................................................................................................................................................................................................................................................................................2211.00110
....................................................................................................CATGCGATGCAGAGCCCAA------GGTTAAG.................................................................................................................................................................................................................................................................2611.00101
..............................................................................................................................................................................................................................................................CAAG------------CTCAAGAACAGCA---GCGAACT................................................................................................2411.00110
.............................................................................................GATGATGCATGCGATGCAGAGCCC................................................................................................................................................................................................................................................................................2411.00110

Generated: 05/18/2015 at 09:28 PM