ID:

dsi_8225

 Coordinate:

2l:20897400-20897549 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.6 -16.8 -16.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. dsi_8225  2l:20897509-20897534 -
  2. x:14713735-14713760 +
  3. node_74822:1825-1850 +
star

Sense Strand Reads

CAATCTCGACGTTCATACGGACTAACGGACATGGCCAGATCGACTAGGCTATTGATCCTGATCAAGAATATATACACTTTATATAGTCGGAAACGCTTCCTTCTGCCTGTTACGCAATATGTTTATTGGCGAAACAAAACACGTTGAAACCAATGTATACCGAATTCTAATTTTATACAAAAATTCTTCGTGTCGTATAGCAAATCACATTGTGCGTCGCCTTCACCATGCCCGGAGTTGGACACTACGA
*****************************************************************...((((((.....)))))).((((....((........)).((((.(((((((....)))).))).))))....((((((....))))))...)))).....................****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body		 M023
head
 M053
female body
.................................................................GAATATATACACTTTATATAGTCGGA............................................................................................................................................................... 26 0 3 20.00 60 40 0 9 2 5 0 4 0 0 0 0 0
.................CGGACTAACGGACATGGCCAGATCGAC.............................................................................................................................................................................................................. 27 0 1 6.00 6 3 0 2 1 0 0 0 0 0 0 0 0
.............CATACGGACTAACGGACATGGCCAGA................................................................................................................................................................................................................... 26 0 1 6.00 6 0 6 0 0 0 0 0 0 0 0 0 0
...............TACGGACTAACGGACATGGCCAGA................................................................................................................................................................................................................... 24 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0
...............................................................................TATATAGTCGGAAACGCT......................................................................................................................................................... 18 0 20 4.10 82 0 0 0 0 0 82 0 0 0 0 0 0
................ACGGACTAACGGACATGGCCAGATCGA............................................................................................................................................................................................................... 27 0 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0 0
...............TACGGACTAACGGACATGGCCAGATC................................................................................................................................................................................................................. 26 0 1 3.00 3 2 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................TACAAAAATTCTTCGTGTCGTATAGCA................................................ 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.................CGGACTAACGGACATGGCCAGATCGA............................................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...............TACGGACTAACGGACATGGC....................................................................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...............TACGGACTAACGGACATGGCCAGATCGA............................................................................................................................................................................................................... 28 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TACCGAATTCTAATTTTATACAAAAAT.................................................................. 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
................ACGGACTAACGGACATGGCCAGATCGAC.............................................................................................................................................................................................................. 28 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
............TCATACGGACTAACGGACATGGCCAGA................................................................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
.....................................GATCGACTAGGCTATTGATCC................................................................................................................................................................................................ 21 0 8 1.25 10 0 0 0 0 0 9 1 0 0 0 0 0
...................................................................ATATATACACTTTATATAGTCGGA............................................................................................................................................................... 24 0 6 1.17 7 3 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGTATAGCAAATCACATTGTGCG.................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................AAACACGTTGAAACCAATGTATACCGA....................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................CGGACTAACGGACATGGCCAGATC................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............TCATACGGACTAACGGACATGGCCAGAT.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ACACAAATCACATTGTGCGTCGCC............................. 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................CTAACGGACATGGCCAGATCGACTAGG.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............TACGGACTAACGGACATGGCCAGATCGAC.............................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAAATTCTTCGTGTCGTATAGCAAA.............................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......CGACGTTCATACGGACTAACGGACA........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCCTTCTGCCTGTTACGCAATA................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................CGGACTAACGGACATGGCCAGATCGACT............................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................CTGACTAACGGACATGGCCAGATCGAC.............................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGCAAATCACATTGTGCGTCGCCT............................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TACAAAAATTCTTCGTGTCGTATAGCAAA.............................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCGG................................................................................................................................................................ 25 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
.....................................................................................................CCTGCCTGTTACGCA...................................................................................................................................... 15 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AACACGTTGAAACCAATGTATACCGA....................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................CGGACTAACGGACATGGCCATATCGACTA............................................................................................................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........TTCATACGGACTAACGGACATGGCCAGA................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................TAACGGACATGGCCAGATCGAC.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTCTTCGTGTCGTATAGCAAATCACA......................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................ACTAACGGACATGGCCAGATCGACTAGGC......................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATCACATTGTGCGTCGCCTT........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
................ACGGACTAACGGACATGGCCAGAA.................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......GACGTTCATACGGACTAACGGACATGGC....................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................TAACGGACATGGCCAGATCGACTAGGC......................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATATATACACTTTATATAGTCGGAA.............................................................................................................................................................. 25 0 6 0.83 5 0 1 3 0 0 0 0 1 0 0 0 0
...............................................................................................................................................TTGAACACCATGTATACCGA....................................................................................... 20 3 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CACTTTATATAGTCGGAAACGCT......................................................................................................................................................... 23 0 6 0.67 4 3 1 0 0 0 0 0 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCGGAAA............................................................................................................................................................. 28 0 3 0.67 2 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCGGAA.............................................................................................................................................................. 27 0 3 0.67 2 0 0 1 0 0 0 1 0 0 0 0 0
..........................................................................CACTTTATATAGTCGGAAACGCTTCCTT.................................................................................................................................................... 28 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0
.....TCGACGTTCATACGGACT................................................................................................................................................................................................................................... 18 0 6 0.50 3 0 0 0 0 0 0 0 3 0 0 0 0
..................................................................TATATATACACTTTATATAGTCGGA............................................................................................................................................................... 25 1 14 0.50 7 1 6 0 0 0 0 0 0 0 0 0 0
.....TCGACGTTCATACGGACTAACG............................................................................................................................................................................................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................AATATATACACTTTATATAGTCGG................................................................................................................................................................ 24 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................TACACTTTATATAGTCGGAAACGCT......................................................................................................................................................... 25 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGAATATATACACT............................................................................................................................................................................ 28 0 10 0.40 4 0 0 0 4 0 0 0 0 0 0 0 0
............................................TAGGCTATTGATCCTGATCAAGAATA.................................................................................................................................................................................... 26 0 8 0.38 3 1 1 0 0 1 0 0 0 0 0 0 0
............................................TAGGCTATTGATCCTGATCAAGA....................................................................................................................................................................................... 23 0 11 0.36 4 2 0 0 1 0 0 0 1 0 0 0 0
....................................................................TATATACACTTTATATAGTCGGAAAC............................................................................................................................................................ 26 0 6 0.33 2 0 0 1 0 0 0 1 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCGGAT.............................................................................................................................................................. 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCG................................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................CGGACATGGCCAGATCGACTAGGTTA....................................................................................................................................................................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................GAATATATACACTTTATATAGTCGGAAAC............................................................................................................................................................ 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGAACACCATGTATACCGA....................................................................................... 19 3 13 0.31 4 4 0 0 0 0 0 0 0 0 0 0 0
................................GGCCAGATCGACTAGGCT........................................................................................................................................................................................................ 18 0 7 0.29 2 0 0 0 0 0 0 0 2 0 0 0 0
.....................................GATCGACTAGGCTATTGATCCTGA............................................................................................................................................................................................. 24 0 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 2
.................................................................GAATATATACACTTTATCTAGTCGGA............................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................TCGACTAGGCTATTGATCCTGATC........................................................................................................................................................................................... 24 0 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0 0
.......................................TCGACTAGGCTATTGATCCTGATCAAGA....................................................................................................................................................................................... 28 0 8 0.25 2 0 0 0 2 0 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGA....................................................................................................................................................................................... 17 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0 0 0
.............................CATGGCCAGATCGACTAGGC......................................................................................................................................................................................................... 20 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................AAATCACGTTGAAACCA.................................................................................................. 17 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................CTTCGGGTCGTAAAGCA................................................ 17 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................TATATAGTCGGAAACGCTTCCTT.................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
......................................................................TATACACTTTATATAGTCGGAAACGCT......................................................................................................................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................CACTTTATATAGTCGGAAACGCTTCCT..................................................................................................................................................... 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................TCGACTAGGCTATTGATCCTGATCAAGAA...................................................................................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TATATACACTTTATATAGTCGGAAA............................................................................................................................................................. 25 0 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................TATATACACTTTATATAGTCGGA............................................................................................................................................................... 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................ATATATACACTTTATATAGTCGGAAAC............................................................................................................................................................ 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................CTAGGCTATTGATCCTGATCAAGAATA.................................................................................................................................................................................... 27 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................ATATATACACTTTATATAGTCGGAAA............................................................................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................ATCGACTAGGCTATTGATCCTGATCAAGAA...................................................................................................................................................................................... 30 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATATATACACTTCATATAGTCGGA............................................................................................................................................................... 25 2 19 0.16 3 3 0 0 0 0 0 0 0 0 0 0 0
....................................................TGAGACTGATCAAGAATAAATACACTT........................................................................................................................................................................... 27 3 20 0.15 3 1 0 0 1 1 0 0 0 0 0 0 0
..............................................................................TTATATAGTCGGAAACGCTTCCTT.................................................................................................................................................... 24 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGAATATAT................................................................................................................................................................................. 23 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0
....................................................TGAGACTGATCAAGAATAAATACACTTT.......................................................................................................................................................................... 28 3 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0
.....................................GATCGACTAGGCTATTGATCCTGAT............................................................................................................................................................................................ 25 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................ATTGATCCTGATCAAGAACATATACACTT........................................................................................................................................................................... 29 1 15 0.13 2 0 1 0 1 0 0 0 0 0 0 0 0
......................................ATCGACTAGGCTATTGATCCTGAT............................................................................................................................................................................................ 24 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TATACACTTCATATAGTCGGAAACGCT......................................................................................................................................................... 27 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATACACTTCATATAGTCGGAAACGC.......................................................................................................................................................... 26 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................TACACTTCATATAGTCGGAAACGCT......................................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGAACATATACACT............................................................................................................................................................................ 28 1 18 0.11 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................CATCTGCCTGTTACGTAAAA................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................TAGGCTATTGATCCTGATCAAGAA...................................................................................................................................................................................... 24 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................CTAGGCTATTGATCCTGATCAAGA....................................................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
........................ACGGACATGGCCAGATCGACTAGGAT........................................................................................................................................................................................................ 26 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
........................ACGGACATGGCCAGATCGACTAGGATTA...................................................................................................................................................................................................... 28 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................TATATAGTCGGAAAAGCTTCCTTCT.................................................................................................................................................. 25 1 20 0.10 2 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................TATATAGTCGGAAAAGCTTCCTTC................................................................................................................................................... 24 1 20 0.10 2 0 0 0 1 1 0 0 0 0 0 0 0
.............................................................................TTTATATAGTCGGAAACGCTTCCT..................................................................................................................................................... 24 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................TATAGTCGGAAACGCTTCCTT.................................................................................................................................................... 21 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0
...............................................................................TATATAGTCGGAAAAGCTTCCTT.................................................................................................................................................... 23 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
..............................................................................TTATATAGTCGGAAAAGCTTCCTT.................................................................................................................................................... 24 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................TTTATATAGTCGGAAAAGCTTCCTTC................................................................................................................................................... 26 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
..............................................................................TTATATAGTCGGAAAAGCTTCCTTC................................................................................................................................................... 25 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0
.AATCTCGACGTTCATACGGAC.................................................................................................................................................................................................................................... 21 0 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................ATACACTTTATATTGTCGGAAACGC.......................................................................................................................................................... 25 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGAATATTTACACT............................................................................................................................................................................ 28 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................AGGCTATTGATCCTGATCAAG........................................................................................................................................................................................ 21 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
........................ACGGACATGACCAGATCGACTAGGC......................................................................................................................................................................................................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................CTGCCTGTTACGCAGGA................................................................................................................................... 17 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CACTTTATATAGTCGGAAAAGCTTTCTTC................................................................................................................................................... 29 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................TATATATACACTTTATATAGTCGGAAA............................................................................................................................................................. 27 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................CCTGATCAAGAATATATACACTTTAT........................................................................................................................................................................ 26 0 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................ATCGACTAGGCTATTGATCCTTAT............................................................................................................................................................................................ 24 1 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................TCGACTAGGCTATTGATCCTGAA............................................................................................................................................................................................ 23 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCCTGATCAAGAATATATACACTTT.......................................................................................................................................................................... 25 0 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TCCTGATCAAGAATATATACACTT........................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................ATCCTGATCAAGAATATATACACT............................................................................................................................................................................ 24 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................ATCGACTAGGCTATTGATCCC............................................................................................................................................................................................... 21 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
......................TAACGGACATGGCAA..................................................................................................................................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................CTTGATCCTGATCAAGAACATATACACT............................................................................................................................................................................ 28 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................TATATATACACTTCATATAGTCGG................................................................................................................................................................ 24 2 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTATATAGTCGGAAACGCTTCCTTC................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................TATATATACACTTCCTATAGTCGGA............................................................................................................................................................... 25 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTATATAGTCGGAAACGCGTCCT..................................................................................................................................................... 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................ATTGATCCTGATCAAGAATATCTCCA.............................................................................................................................................................................. 26 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TATAGTCGGAAACGCT......................................................................................................................................................... 16 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................ATATAGTCGGAAACGCT......................................................................................................................................................... 17 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................TATATAGTCGGAGACGCTTCCTTCT.................................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................ATATAGTCGGAAACGCGTCCT..................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................TAGTCGGAAACGCTTCCTTCTGCCT.............................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................TATATAGTCGGAAAAGCTTCCTTCTGC................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................ACGGACATGGCCAGATCGACT............................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................TATAGTCGGAAACGCTTCCTTCTGC................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................TATATAGTCGGAAACGCTTCCT..................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................TATATAGTCGGAAACGCTTCCTTCT.................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TTTATATAGTCGGAAAAGCTTCCT..................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................ATCCTGATCAAGAATAT................................................................................................................................................................................... 17 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................TTATATAGTCGGAAAAGCTTCCTTCTG................................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTTAGAGCTGCAAGTATGCCTGATTGCCTGTACCGGTCTAGCTGATCCGATAACTAGGACTAGTTCTTATATATGTGAAATATATCAGCCTTTGCGAAGGAAGACGGACAATGCGTTATACAAATAACCGCTTTGTTTTGTGCAACTTTGGTTACATATGGCTTAAGATTAAAATATGTTTTTAAGAAGCACAGCATATCGTTTAGTGTAACACGCAGCGGAAGTGGTACGGGCCTCAACCTGTGATGCT
******************************************************************...((((((.....)))))).((((....((........)).((((.(((((((....)))).))).))))....((((((....))))))...)))).....................***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 O001
Testis
 SRR902009
testis
 M053
female body
 M023
head
 M025
embryo
 M024
male body
.....AGCTGCAAGTATGCCTGATTGCCTGT........................................................................................................................................................................................................................... 26 0 1 11.00 11 0 6 4 1 0 0 0 0 0 0 0 0
...AGAGCTGCAAGTATGCCTGATTGCCTGT........................................................................................................................................................................................................................... 28 0 1 6.00 6 0 3 1 1 1 0 0 0 0 0 0 0
..........................................TGATCCGATAACTAGGACTAGTGCTT...................................................................................................................................................................................... 26 1 8 4.88 39 0 7 4 17 11 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTAAGAAGCACAGCATATCGTTTAGT........................................... 26 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0
...AGAGCTGCAAGTATGCCTGATTGCCT............................................................................................................................................................................................................................. 26 0 2 2.50 5 0 4 0 1 0 0 0 0 0 0 0 0
...........................CTGTACCGGTCTAGCTGATCCGAT....................................................................................................................................................................................................... 24 0 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0 0
.....AGCTGCAAGTATGCCTG.................................................................................................................................................................................................................................... 17 0 20 2.35 47 45 2 0 0 0 0 0 0 0 0 0 0
........................TGCCTGTACCGGTCTAGCTGATCCGA........................................................................................................................................................................................................ 26 0 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ATGGCTTAAGATTAAAATATGTTTTT................................................................... 26 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.......................TTGCCTGTACCGGTCTAGCTGATCCGA........................................................................................................................................................................................................ 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
....................TGATTGCCTGTACCGGTCTAGCTGAT............................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.....AGCTGCAAGTATGCCTGATTGCCTGTA.......................................................................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................AGGACTAGTTCTTATATATGTGAAAT......................................................................................................................................................................... 26 0 13 1.15 15 0 7 5 1 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGTGGTACGGGCCTCAACCTGTGATG.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.TTAGAGCTGCAAGTATGCCTGAT.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGGTTACATATGGCTTAAGATTAAAAT........................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......CTGCAAGTATGCCTGATTGCCTGT........................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAGAAGCACAGCATATCGTTTTGT........................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....GAGCTGCAAGTATGCCTGATTGCCTGT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................ATGGCTTAAGATTAAAATATGTT...................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTTTTTAAGAAGCACAGCATATCGTTT.............................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................ATAACCGCTTTGTTTTGTGCAACTT...................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TACATATGGCTTAAGATTAAAATAT......................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..TAGAGCTGCAAGTATGCCTGATTGC............................................................................................................................................................................................................................... 25 0 2 1.00 2 1 0 0 1 0 0 0 0 0 0 0 0
...........AAGTATGCCTGATTGCCTGTACCGGT..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................TGATCCGATAACTAGGACTAGTGCTTAT.................................................................................................................................................................................... 28 1 7 1.00 7 0 1 2 0 4 0 0 0 0 0 0 0
............................................................................................TGCGAAGGAAGACGGACAATGCGT...................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TCGTTACATATGGCTTAAGATTAAAAT........................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................TGCCTGTACCGGTCTAGCTGATCCGAT....................................................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................AGATTGCCTGTACCGGTCTAGCTGAT............................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ATGCGTTATACAAATAACCGCTTTGT.................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGAAGACGGACAATGCGT...................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........CAAGTATGCCTGATTGCCTGTAC......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAAAATATGTTTTTAAGAAGCACAGCAT..................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTGCGAAGGAAGACGGACAATGCGT...................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCAGCGGAAGTGGTACGGGCCTCAACCT........ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................AGGAAGACGGACAATGCGTTAT................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................TTGCCTGTACCGGTCTAGCTGATCCG......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....AGCTGCAAGTATGCCTGA................................................................................................................................................................................................................................... 18 0 6 0.83 5 5 0 0 0 0 0 0 0 0 0 0 0
....................................................ACTAGGACTAGTTCTTATATATGTG............................................................................................................................................................................. 25 0 11 0.82 9 1 2 2 3 1 0 0 0 0 0 0 0
........................TGCCTGTACCGGTCTAGCTGATC........................................................................................................................................................................................................... 23 0 5 0.80 4 1 0 0 1 0 1 0 0 1 0 0 0
..........................CCTGTACCGGTCTAGCTGAT............................................................................................................................................................................................................ 20 0 5 0.60 3 0 0 0 0 0 0 3 0 0 0 0 0
GTTAGAGCTGCAAGTA.......................................................................................................................................................................................................................................... 16 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................AACTTTGGTTAAATATGGGTT...................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
GTTAGAGCTGCAAGT........................................................................................................................................................................................................................................... 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................GGTCTAGCTGATCCGATAACTAGGAC.............................................................................................................................................................................................. 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
GTTAGAGCTGCAAGTATGCCTG.................................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
GTTAGAGCTGCAAGTAT......................................................................................................................................................................................................................................... 17 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTGCGAAGGAAGACGGACA............................................................................................................................................ 19 0 20 0.45 9 9 0 0 0 0 0 0 0 0 0 0 0
.....................................CTAGCTGATCCGATAACTAGGACT............................................................................................................................................................................................. 24 0 7 0.43 3 2 0 0 0 0 0 0 0 1 0 0 0
........................TGCCTGTACCGGTCTAGCTGATCCAAT....................................................................................................................................................................................................... 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........TGCAAGTATGCCTGA................................................................................................................................................................................................................................... 15 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
.......CTGCAAGTATGCCTGA................................................................................................................................................................................................................................... 16 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................ATAACTAGGACTAGTTCTTATATATG............................................................................................................................................................................... 26 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0
.....................................CTAGCTGATCCGATAACTAGGAC.............................................................................................................................................................................................. 23 0 7 0.29 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................AGGACTAGTTCTTATATATGTGAA........................................................................................................................................................................... 24 0 16 0.25 4 0 3 0 1 0 0 0 0 0 0 0 0
............................TGTACCGGTCTAGCTGATC........................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TACCGGTCTAGCTGATC........................................................................................................................................................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CAGCCTTTGCGAAGGAAGACGGACAAT.......................................................................................................................................... 27 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................CTGTACCGGTCTAGCTGATC........................................................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
...AGAGCTGCAAGTATGCCTGA................................................................................................................................................................................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TCAGCCTTTGCGAAGGAAGA.................................................................................................................................................. 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
......................TTTGCCTGTACCGGTCTAGCTGATC........................................................................................................................................................................................................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
................................CCGGTCTAGCTGATCCGATAACT................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGGACTAGTTCTTATATATGTGAAATAT....................................................................................................................................................................... 28 0 13 0.15 2 0 1 0 1 0 0 0 0 0 0 0 0
..............................................CCGATAACTAGGACTAGTTC........................................................................................................................................................................................ 20 0 20 0.15 3 0 0 0 0 0 0 0 0 0 3 0 0
..........................................TGATCCGATAACTAGGACTAGTTCTT...................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................CTCTAGCTGATCCGATAACTAGGAC.............................................................................................................................................................................................. 25 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................CTAGCTGATCCGATAACTAGGA............................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................TCTAGCTGATCCGATAACTAGGACT............................................................................................................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................CTGATCCGATAACTAGGACTAGTTCTT...................................................................................................................................................................................... 27 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................TGATCCGATAACTAGGACTAGTGCTTA..................................................................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................GATCCGATAACTAGGACTAGTGCTT...................................................................................................................................................................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................GCTGATCCGATAACTAGGACTAG........................................................................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................TAGCTGATCCGATAACTAGGACTA............................................................................................................................................................................................ 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................TAGCTGATCCGATAACTAGGAC.............................................................................................................................................................................................. 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................TAGCTGATCCGATAACTAGGACT............................................................................................................................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................ATCCGATAACTAGGACTAGTTCTTAT.................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGGACTAGTTCTTATATATGTG............................................................................................................................................................................. 22 0 17 0.12 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................ATCCGATAACTAGGACTAGTGCTTAT.................................................................................................................................................................................... 26 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................CTGATCCGATAACTAGGACT............................................................................................................................................................................................. 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................TGATCCGATAACTAGGACTAGT.......................................................................................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................TGATCCGATAACTAGGACTAGTTCT....................................................................................................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TGCGAAGGAAGACGGAC............................................................................................................................................. 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................TCCGATAACTAGGACTAGTGCTTAT.................................................................................................................................................................................... 25 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TAACTAGGACTAGTTCTTATATATG............................................................................................................................................................................... 25 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0
..................................GGTCTAGCTGATCCAATAACTAGGAA.............................................................................................................................................................................................. 26 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................ATCCGATAACTAGGACTAGTGCTT...................................................................................................................................................................................... 24 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................CAGCCTTTGCGAAGGAAGACGGACAA........................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTTTGCGAAGGAAGACGG............................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GTTTAGTGCAACGTTGGTA................................................................................................. 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
........................TTTCTGTACCGGTCTAGCTGATCCG......................................................................................................................................................................................................... 25 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
.TTAGAGCTGCAAGTATGCCTG.................................................................................................................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................ATAACTAGGACTAGTTCTTATATATGTG............................................................................................................................................................................. 28 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................AACTAGGACTAGTTCTTGTATATGTGAAAT......................................................................................................................................................................... 30 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................GGACTAGTTCTTATATATGTGAAAT......................................................................................................................................................................... 25 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................TAGGACTAGTTCTTATATATGTGAAAT......................................................................................................................................................................... 27 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................CATTGCCTGTACCAGTCTAGCTGAGC........................................................................................................................................................................................................... 26 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.TTAGAGCTGCAAGTATGCCT..................................................................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................CTAGCTGATCCGATAACT................................................................................................................................................................................................... 18 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................TAGGACTAGTTCTTATATATGTGAAA.......................................................................................................................................................................... 26 0 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................TAGGACTAGTTCTTATATATGTG............................................................................................................................................................................. 23 0 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TAACTAGGACTAGTTATTATATATGTG............................................................................................................................................................................. 27 1 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................CTAGCTGATCCGATAA..................................................................................................................................................................................................... 16 0 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................GTTCTTATATATGTGAA........................................................................................................................................................................... 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CCTTTGCGAAGGAAGACGGACA............................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................TAGGACTAGTTCTTATATA................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................AAACTAGGACTAGTTCTTGTATATGTGAA........................................................................................................................................................................... 29 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................ATAACTATGACTAGTTCTTATATATG............................................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................ATAACTAGGACTAGTTCTTATATACG............................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....GAGCTGCAAGTATGCCT..................................................................................................................................................................................................................................... 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TCTTATATATGTGAAA.......................................................................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GCCTGTACCGCTCTAGCTGA............................................................................................................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................AGACTAGTTCTTGTATATGTGAAAT......................................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................CCTTTGCGAAGGAAGACGGA.............................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TAAGATTAGAATATG........................................................................ 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................CCGATAACTAGGACTAGTTCT....................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................AACTAGGACTAGTTCTTAT.................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................CGATAACTAGGACTAGTTCTT...................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................GCCTTTGCGAAGGAAGACGGACAAT.......................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20897350-20897599 - dsi_8225 CAATCTCGACGTTCAT------------ACGG----ACTAACGGACATGGC----CAGATCGACTAGGCTATTGATCCTGATCAAGAATATAT------ACACTTTATATAGTCGGAAACGCTTCCTTCTGCCTGTTACGCAATATGTTTAT----------TGG-----------------------CGAAACAAAACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGAA----TTCTAATTTTA--------------------------------TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAATCACA----TTGTGCGTCGCCTTCACCATGCCCGGAGTTGGACACTACGA
droSec2 scaffold_28:101343-101592 - CAAACTCGACGTTCAT------------ACAG----ACTAACTTACATGGC----CAGATCGACTAGGCTATTGATCCTGATCAATAATATAT------ACACTTTATATAGTCGGAAACGCTTCCTTCTGCCTGTTACGCAATATGTTTAT----------TGG-----------------------CGAAACAAAACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGAA----TTCTAATTTTA--------------------------------TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAATCACA----TTGTGCGTCGCCTTCACCATGCCCGGAGTTGGACACTACGA
dm3 chr3R:334848-335047 - AGACCTCGACGTTCAT--------ACGAATGG----ACAGACGGACAGGGC----CATATCGACTCGGCTATTGATCCTGATCAAGAATATAT------ATACTTAACATGGGCAGAAACGATTCCTTCTGCCTGTTATATAC--TTTTCAG----------CGATCTTGTATACAATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATTTTCTA-------GTGTAA-----------------TTCTAGAATTATTC---------------------------------------------------------------------------------------------------------------TAGTGTC-----------
droEre2 scaffold_4845:22522523-22522765 + GAC-TCCGACGTTCATA----GCGACAGACAG----ACAGTCGGACATGGTCAGTCAAATCGACTCAGATATTGATCCTGATCAAGAATATATGTACATATACTTTATGTGGTGGGAAACGATTCTTTCTACGTGTAACACAG--C---GAGTAAAGTCAAA-----------------------------------ACCATG--------TG-----A-----ATCGTATAAAA-C---T---------------G-----TATAACAAA----CTGTAGTCATG--TATA---------TGAAAA---------TG------TGTTGCTAAT------GTTTTA----------------------------------------------------------CGGTGAG----T----TTGTACGTTACATTTA-------------------------
droYak3 v2_chrUn_856:5114-5327 + AGATCTCAGCGTTCATA----CGGACGGAGAG----ACAGACGGACATGGC----CAGATCGACTCGGCTATTGATCCTGATCAGGAATATAT------ATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTTTATAC--TTTTTAA----------CGA-----------------------ATCTAGTGTAACCTTTAACTC--AAC----GAGTAACGAGTGTAAAAATA---------------TATA-----------------------------------------------------------------GAAATGT---AT------GTAAGT----------------------------------------------------------TAACAAATCACT----TCGT-------------------------------------
droEug1 scf7180000409639:45540-45798 - AGATCTCAGCGTTCATACGGACAGACGGACGG----ACAGACGGACATGGC----TCAATCCACTTCGCAATTCATCCTGATCAAGAATATATATAC--ATACTTTATAGGGTCGGAAACGCTTCCTTCTACATGTTACATAC--TTTTCAA----------CGA-----------------------ATTTAGTATTCCCTCTTACTC--TAC----GAGAAATGGGTATAAAAAT----------------------------------------TTGATTTTA--------------------------------TTGAGAAATT----GT------GTAGTA----------------------------------------------------------AACTGGACCGCAAAGTGCATAAGATATCGTCAATATTATCGGAGTT-----------
droBia1 scf7180000301589:73385-73592 + AGACTTCAGCGTTCAT------------ACGGTTTTACAGGCGGACATGGC----TAGATCGCCTCGGCTAGTGAACCTGATCAAGAATATTT------ATACTTCATGGGGTCGGAAACGCTTCCTTCTAACTGATTCATTG-----------------------------------------------------------CTTAGTC--TAC----AAGTAACGGATATAGAAATA---------------AATG-----GAT--------------------A---------------TGAAAAAATTATATCTA------------TGGT------GTTTTT----------------------------------------------------------TAACATATAACC----TTCTACGCTG-------------------------------
droTak1 scf7180000415115:987300-987544 + AGATCTCAGCGTTCATA----CGGACGGACAG----ACAGACGGGCATTGC----TAGATTGACTTGGTTAGTGACCCTGATCAAGAATCTAT------ATACTTTATGGGGTCGGAAACGCTTTTTTCTATCTGTTACATAC--GTTTGCA----------CGA-----------------------ATACAATATACCCTTTTACTC--TAC-----------GAGTATGAATAC--------------TCTAAA-ACAAAGT------CTCC-----------TCA---ATTTCGTAA-----TACTCACATTTT------------GG------------------------------------------------------------------------------------------GTGTGTTGTCTTCGGTGGACTCCGAGTTGGA--------
droEle1 scf7180000491104:524016-524241 + C---------------------GTAGAAACGT----ATAGACGGACATGGC----TTGATCGACTTTTCTAGTGATGCCGATCAAGAATATAT------ATACTTTATAGGGTCGGGAATGCCTCATTCACTGCGTTGCAAAC--TTCTGAC----------TGG-----------------------TATAATAGAACCCTC--------TGC----A-----AATGTATGTATCT----CTTGTAAAGAAAAATAA-ATGTAT----------------------------------------------------------------ATCAT------GTCAAA-------TACAAATGTT--------ATG------------------------------CATTATTT--------------------TACTTCATGTTTGTAGTTGAA--------
droRho1 scf7180000767612:17276-17497 + G-------------------ACGGACAGACGG----ACAGACGGACATGGC----TAGATCGACTCTCCTGGTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCGTTACAAAC--TGTTGAC----------TGA-----------------------AATTATAATACCCTC--------TGC----A-----AGGGTATAATAAA--------------------------------------ATATAATACTT--------------------------------TATGAGCTCTGTGCAC------GTCATA----------------------------------------------------------TGACAA----------TTGTAAATCG----------ACCCAGAGCCATAAACTATGA
droFic1 scf7180000453927:585052-585248 - G-------------------ACAGACAGACAG----ACGTACAGACGTACA----TATTTCGATTCAGATGGTGATGCTGATCAGGAATATAT------ATACTTTATGGGGTCGGAGGTGTCTCCTTCACTGCGTTGCAAAC--TTCTTAC----------TGA-----------------------AATTACAATACCCTC--------TGC----A-----AAGGTATAACAAG--------------------------------------C--CAATAAAA--------------------------------C---------ATGCA------------------------AGTATT--------TCGACTTAAGC--------------AA--A---TAGCAAATCA-----------------------------------------------
droKik1 scf7180000298128:3422-3645 + G-------------------ACAGACAGACGG----ACAGACGGACATGGC----TAGATCGACTCGGCTGTTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAAC--TTCTGAC----------TGA-----------------------AATTATAATACCCT----------GC----A-----AGGGTATAAAAACA-AC---------------AT-ATGGAG----------------------------------------------------------------AACAT------ATTAAT--TTATGTACAT-----TTTCTTAT--------------------------GATAATATAGA-----AAC----CTGTGCAT-GCTTTCATTATG--------------------
droAna3 scaffold_13333:35379-35587 - G-------------------ACGGACAGACGG----ACAGACGGACATGCT----CATATCGACTTTGGAGGTGATCCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACAC--TTTTGAC----------CAA-----------------------AATTATAATACCCTC--------TGC----A-----AGGGTATAATGAA------------------------------------------------------------------------------------------TATGCA------------------------AATATT--------TATGATTAAAAATAGTTTTGTTGTT--------TTTCAAAGTACA----AGGTGCGT---------------------------------
droBip1 scf7180000394852:31012-31251 + AGATCCACGCGTTCATA----CGGACGGACGG----ACAGACGGGCACGGC----TATATCGACAAGGCTGTTGGAGATGATCAAGAATATAT------GTACTTTATGGGGTCGGAGATGATTCCATCTCTATGTTACATAC--ATTCACA----------AGA-----------------------CTACAAAATACCCGTATACTC--TAC----GATTACCGGGTATAAAAAAG-AT------------------------------------GTATTTTTC--------------------------------CAGGGAAAGCGTTAAG------CTTATA----------------------------------------------------------AAGCAGACAAAA----TTATGCGTGGACTACA-------------------------
dp5 Unknown_group_80:23042-23275 - A----------------------------CGG----ACAGACAGACAGGGC----TCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACAC--ATCCAC--------------------------TTTTACCACAAATCTAATATACCCCAATACTCATTTT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GATTCAAGAAAAAATCCTA----------------------------------------------------------GACAAACTATCA----CTGAAGGTGGACTACCCCAAACAAGGATTTGGAAAC-ACAA
droPer2 scaffold_5415:147-340 - G-------------------ACGGACAGACGG----ACAGACAGACATGGC----TCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACAC--ATACAC--------------------------TTTTACCACAAATCTAATATACCCCAATACTCATTTT----GAGTATCGGGTATAAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCACT----TTATGCTTAAACTT---------------------------
droWil2 scf2_1100000004962:32319-32542 - G-------------------ACGGACGGGCGG----ACAGACGGACATGGC----TATATCAACTCAGCTTCTCATGCTGATCAAGAATTTAT------ATACTTTATGGGGTCGTAAACGCCTCCTTCTGTGCGTTACGAAC--ATCTGAC----------CAA-----------------------TTTTACAATACCCTC--------TGC----A-----AGGGTATAAAAAG--------------TAAATA-AAAATGT------ATCA-----------CAA---AATATATA-------------------------------------------------------------------------------------------------------------AAAAGCA----TTATGAAAAACTTCGACCAAGCTGGGAGTCGAACCCT----
droVir3 scaffold_13050:2875717-2875922 - CA-TC----------TA----CGGACGGACAG----ACGGACGGACATGGC----TAGATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTATTACATAC--ATTTGG--------------------------ATTTTGCACAAATACAATATACCCTTATACCCATATTTAATGGGTTCAGGATATAAAAAT------------------------------------------------------------------------------------------TATATGA------GTCCT--------------------------CA-------------------------------TAGCCAAGTACA---------------------------------------------
droMoj3 scaffold_6500:30744940-30745177 - AAATCGACGCGTTCAT--------ACATACGG----ACAGACGGACAGGGC----AAAATCGACTCAGCTCGTCGCCCTGATCAAGAATATAT------ATACTTTATGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATAC--ATTTCAA------CAAA--------------------------ACCATTATACCCTGATTTCCCATTGAAAATAGGTTCAGCGTATAAAAAG------------------------------------------------------------------------------------------C---------------GTATTTCAAATACAAGA-----------------------------------------------------GAC----TTGTGCT-----TAGGCCATTCACGAATTTGAATGTTATGA
droGri2 scaffold_14906:13200560-13200737 - AGATCTGTGTGTTCAT--------------AG----ACAGACGGACATGGC----CATATCGACTCGGCTGTTGACCCTGATCAAGAATATAT------ATACTTTATGGGGTCGGGGATGCTTCCTTCTGTCTGTTACAGAC--ATTTGCA------CAAA--------------------------ACCAATAAAACCTTTTTACCGATTTTTAATATGTTCAGGGTATAAAAAT------------------------------------------------------------------------------------------GCT-----------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAATCTCGACGTTCAT------------ACGG----ACTAACGGACATGGC----CAGATCGACTAGGCTATTGATCCTGATCAAGAATATAT------ACACTTTATATAGTCGGAAACGCTTCCTTCTGCCTGTTACGCAATATGTTTAT----------TGG-----------------------CGAAACAAAACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGAA----TTCTAATTTTA--------------------------------TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAATCACA----TTGTGCGTCGCCTTCACCATGCCCGGAGTTGGACACTACGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................GAATATAT------ACACTTTATATAGTCGGA........................................................................................................................................................................................................................................................................................................................................................26320.0060000000040250094000
.............................CGG----ACTAACGGACATGGC----CAGATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................2716.00600000003100020000
.............CAT------------ACGG----ACTAACGGACATGGC----CAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2616.00600000060000000000
...............T------------ACGG----ACTAACGGACATGGC----CAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2415.00500000032000000000
.........................................................................................................TATATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................18204.1082000082000000000000
............................ACGG----ACTAACGGACATGGC----CAGATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000011010000000
...............T------------ACGG----ACTAACGGACATGGC----CAGATC................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300100002000000000
..............................................................................................................................................................................................................................................................................................................................TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCA....................................................2712.00200000011000000000
.............................CGG----ACTAACGGACATGGC----CAGATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000011000000000
...............T------------ACGG----ACTAACGGACATGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000011000000000
...............T------------ACGG----ACTAACGGACATGGC----CAGATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000001010000000
........................................................................................................................................................................................................................................................................TACCGAA----TTCTAATTTTA--------------------------------TACAAAAAT......................................................................................................................................2712.00200000020000000000
............................ACGG----ACTAACGGACATGGC----CAGATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000001100000000
............TCAT------------ACGG----ACTAACGGACATGGC----CAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000001100000000
.........................................................GATCGACTAGGCTATTGATCC...............................................................................................................................................................................................................................................................................................................................................................................................2181.251000009000000001000
.......................................................................................ATATAT------ACACTTTATATAGTCGGA........................................................................................................................................................................................................................................................................................................................................................2461.17700000023000020000
......................................................................................................................................................................................................................................................................................................................................................CGTA----------------------------------------------------------TAGCAAATCACA----TTGTGCG..................................2311.00100000010000000000
...................................................................................................................................................................................................AAACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGA...............................................................................................................................................................................................2711.00100000010000000000
.............................CGG----ACTAACGGACATGGC----CAGATC................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
............TCAT------------ACGG----ACTAACGGACATGGC----CAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.....................................CTAACGGACATGGC----CAGATCGACTAGG.........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...............T------------ACGG----ACTAACGGACATGGC----CAGATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................AAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAA..................................................2511.00100000001000000000
......CGACGTTCAT------------ACGG----ACTAACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..........................................................................................................................TTCCTTCTGCCTGTTACGCAATA............................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
.............................CGG----ACTAACGGACATGGC----CAGATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAAATCACA----TTGTGCGTCGCCT............................2511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAA..................................................2911.00100000010000000000
.....................................................................................GAATATAT------ACACTTTATATAGTCGG.........................................................................................................................................................................................................................................................................................................................................................2531.00300000000000030000
....................................................................................................................................................................................................AACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGA...............................................................................................................................................................................................2611.00100000000100000000
...........TTCAT------------ACGG----ACTAACGGACATGGC----CAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......................................TAACGGACATGGC----CAGATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................TTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAATCACA----.........................................2611.00100000000010000000
....................................ACTAACGGACATGGC----CAGATCGACTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACA----TTGTGCGTCGCCTT...........................2011.00100100000000000000
............................ACGG----ACTAACGGACATGGC----CAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.......GACGTTCAT------------ACGG----ACTAACGGACATGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......................................TAACGGACATGGC----CAGATCGACTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.......................................................................................ATATAT------ACACTTTATATAGTCGGAA.......................................................................................................................................................................................................................................................................................................................................................2560.83500000010001030000
....................................................................................................CACTTTATATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................2360.67400000013000000000
.....................................................................................GAATATAT------ACACTTTATATAGTCGGAAA......................................................................................................................................................................................................................................................................................................................................................2830.67200000001000001000
.....................................................................................GAATATAT------ACACTTTATATAGTCGGAA.......................................................................................................................................................................................................................................................................................................................................................2730.67200000000000011000
....................................................................................................CACTTTATATAGTCGGAAACGCTTCCTT.............................................................................................................................................................................................................................................................................................................................................2840.50200000010010000000
.....TCGACGTTCAT------------ACGG----ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................1860.50300000000003000000
.....TCGACGTTCAT------------ACGG----ACTAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110000000000000000
......................................................................................AATATAT------ACACTTTATATAGTCGG.........................................................................................................................................................................................................................................................................................................................................................2450.40200000000000020000
............................................................................................T------ACACTTTATATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................2550.40200000001010000000
......................................................................ATTGATCCTGATCAAGAATATAT------ACACT.....................................................................................................................................................................................................................................................................................................................................................................28100.40400000000400000000
................................................................TAGGCTATTGATCCTGATCAAGAATA...................................................................................................................................................................................................................................................................................................................................................................................2680.38300000011010000000
................................................................TAGGCTATTGATCCTGATCAAGA......................................................................................................................................................................................................................................................................................................................................................................................23110.36400000002101000000
........................................................................................TATAT------ACACTTTATATAGTCGGAAAC.....................................................................................................................................................................................................................................................................................................................................................2660.33200000000000011000
.....................................................................................GAATATAT------ACACTTTATATAGTCGGAT.......................................................................................................................................................................................................................................................................................................................................................2730.33100000000000010000
.....................................................................................GAATATAT------ACACTTTATATAGTCG..........................................................................................................................................................................................................................................................................................................................................................2430.33100000000001000000
.....................................................................................GAATATAT------ACACTTTATATAGTCGGAAAC.....................................................................................................................................................................................................................................................................................................................................................2930.33100000001000000000
................................................GGC----CAGATCGACTAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................1870.29200000000002000000
.........................................................GATCGACTAGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................2470.29200020000000000000
...........................................................TCGACTAGGCTATTGATCCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................2480.25200000000200000000
...........................................................TCGACTAGGCTATTGATCCTGATCAAGA......................................................................................................................................................................................................................................................................................................................................................................................2880.25200000000200000000
......................................................................ATTGATCCTGATCAAGA......................................................................................................................................................................................................................................................................................................................................................................................17200.25500000005000000000
.............................................CATGGC----CAGATCGACTAGGC........................................................................................................................................................................................................................................................................................................................................................................................................2040.25100000000001000000
.........................................................................................................TATATAGTCGGAAACGCTTCCTT.............................................................................................................................................................................................................................................................................................................................................23200.20400000004000000000
..........................................................................................TAT------ACACTTTATATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................2750.20100000000010000000
....................................................................................................CACTTTATATAGTCGGAAACGCTTCCT..............................................................................................................................................................................................................................................................................................................................................2750.20100000000100000000
...........................................................TCGACTAGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................2960.17100000001000000000
........................................................................................TATAT------ACACTTTATATAGTCGGAAA......................................................................................................................................................................................................................................................................................................................................................2560.17100000000010000000
........................................................................................TATAT------ACACTTTATATAGTCGGA........................................................................................................................................................................................................................................................................................................................................................2360.17100000010000000000
.......................................................................................ATATAT------ACACTTTATATAGTCGGAAAC.....................................................................................................................................................................................................................................................................................................................................................2760.17100000001000000000
...............................................................CTAGGCTATTGATCCTGATCAAGAATA...................................................................................................................................................................................................................................................................................................................................................................................2760.17100000010000000000
.......................................................................................ATATAT------ACACTTTATATAGTCGGAAA......................................................................................................................................................................................................................................................................................................................................................2660.17100000001000000000
..........................................................ATCGACTAGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................3060.17100000001000000000
........................................................................................................TTATATAGTCGGAAACGCTTCCTT.............................................................................................................................................................................................................................................................................................................................................24200.15300000030000000000
......................................................................ATTGATCCTGATCAAGAATATAT------..........................................................................................................................................................................................................................................................................................................................................................................23200.15300000000030000000
.........................................................GATCGACTAGGCTATTGATCCTGAT...........................................................................................................................................................................................................................................................................................................................................................................................2570.14100010000000000000
..........................................................ATCGACTAGGCTATTGATCCTGAT...........................................................................................................................................................................................................................................................................................................................................................................................2480.13100000000010000000
................................................................TAGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................2490.11100000000100000000
...............................................................CTAGGCTATTGATCCTGATCAAGA......................................................................................................................................................................................................................................................................................................................................................................................2490.11100000001000000000
.......................................................................................................TTTATATAGTCGGAAACGCTTCCT..............................................................................................................................................................................................................................................................................................................................................24200.10200000000200000000
...........................................................................................................TATAGTCGGAAACGCTTCCTT.............................................................................................................................................................................................................................................................................................................................................21200.10200000000002000000
.AATCTCGACGTTCAT------------ACGG----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................21110.09100000000100000000
.................................................................AGGCTATTGATCCTGATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................21120.08100000010000000000
............................................................................CCTGATCAAGAATATAT------ACACTTTAT.................................................................................................................................................................................................................................................................................................................................................................26130.08100000010000000000
...........................................................TCGACTAGGCTATTGATCCTGAA...........................................................................................................................................................................................................................................................................................................................................................................................23140.07100000001000000000
...........................................................................TCCTGATCAAGAATATAT------ACACTTT...................................................................................................................................................................................................................................................................................................................................................................25150.07100000000010000000
...........................................................................TCCTGATCAAGAATATAT------ACACTT....................................................................................................................................................................................................................................................................................................................................................................24160.06100000001000000000
..........................................................................ATCCTGATCAAGAATATAT------ACACT.....................................................................................................................................................................................................................................................................................................................................................................24160.06100000001000000000
..........................................................ATCGACTAGGCTATTGATCCC..............................................................................................................................................................................................................................................................................................................................................................................................21160.06110000000000000000
.......................................................................................................TTTATATAGTCGGAAACGCTTCCTTC............................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
...........................................................................................................TATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
..........................................................................................................ATATAGTCGGAAACGCT..................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
.............................................................................................................TAGTCGGAAACGCTTCCTTCTGCCT.......................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
........................................ACGGACATGGC----CAGATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000000000
...........................................................................................................TATAGTCGGAAACGCTTCCTTCTGC.........................................................................................................................................................................................................................................................................................................................................25200.05100000000001000000
.........................................................................................................TATATAGTCGGAAACGCTTCCT..............................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.........................................................................................................TATATAGTCGGAAACGCTTCCTTCT...........................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
..........................................................................ATCCTGATCAAGAATAT..................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
CAAACTCGACGTTCAT------------ACAG----ACTAACTTACATGGC----CAGATCGACTAGGCTATTGATCCTGATCAATAATATAT------ACACTTTATATAGTCGGAAACGCTTCCTTCTGCCTGTTACGCAATATGTTTAT----------TGG-----------------------CGAAACAAAACACGT--------TGA----A----------------ACCAAT---------------G-----TATACCGAA----TTCTAATTTTA--------------------------------TACAAAAATTCTTCGT------GTCGTA----------------------------------------------------------TAGCAAATCACA----TTGTGCGTCGCCTTCACCATGCCCGGAGTTGGACACTACGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................A----TTGTGCGTCGCCTTCACCATGCCC.................2511.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................TCACA----TTGTGCGTCGCCTTCACCATGC...................2711.0010010
.......................................................................................ATATAT------ACACTTTATATAGTCGGAAA......................................................................................................................................................................................................................................................................................................................................................2660.3321010
.......................................................................................ATATAT------ACACTTTATATAGTCGGA........................................................................................................................................................................................................................................................................................................................................................2460.3320020
.........................................................................................ATAT------ACACTTTATATAGTCGG.........................................................................................................................................................................................................................................................................................................................................................2170.1411000
..........................................................ATCGACTAGGCTATTGATCCTGATCA.........................................................................................................................................................................................................................................................................................................................................................................................2690.1111000
dm3
AGACCTCGACGTTCAT--------ACGAATGG----ACAGACGGACAGGGC----CATATCGACTCGGCTATTGATCCTGATCAAGAATATAT------ATACTTAACATGGGCAGAAACGATTCCTTCTGCCTGTTATATAC--TTTTCAG----------CGATCTTGTATACAATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATTTTCTA-------GTGTAA-----------------TTCTAGAATTATTC---------------------------------------------------------------------------------------------------------------TAGTGTC-----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................TCCTGATCAAGAATATAT------ATACTTAACA................................................................................................................................................................................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TATACAATTTTACCAAAGA-------------------------CACTAGAA...............................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010012200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCCTGATCAAGAATATAT------ATACTTAA..................................................................................................................................................................................................................................................................................................................................................................2643.50140000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010107110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCCTGATCAAGAATATAT------ATACTTA...................................................................................................................................................................................................................................................................................................................................................................2553.40170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000004000000000100000000000000000000000000000000000000000000000000000000000000020104040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATTTTCT..............................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GAAACGATTCCTTCTGCCTGTTATA.................................................................................................................................................................................................................................................................................................................................2522.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATTGATCCTGATCAAGAATATAT------A.........................................................................................................................................................................................................................................................................................................................................................................25202.304600000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TATACAATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------......................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TACAATTTTACCAAAGA-------------------------CACTAGAA...............................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTCAT--------ACGAATGG----ACAGACGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAT--------ACGAATGG----ACAGACGGACAGG............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TACTTAACATGGGCAGAAACGATTCC...............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAT--------ACGAATGG----ACAGACGGACAGGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TACTTAACATGGGCAGAAACGATTCCT..............................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGTTATATAC--T...........................................................................................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCCTGATCAAGAATATAT------ATACTTAACT................................................................................................................................................................................................................................................................................................................................................................2831.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AT--------ACGAATGG----ACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................T------ATACTTAACATGGGCAGAAACGAT..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATATAT------ATACTTAACATGGGCAGAA.......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CCTCGACGTTCAT--------ACGAATGG----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACCTCGACGTTCAT--------ACGAATGG----ACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................AC--TTTTCAG----------CGATCTTGTATACAAT...........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................TAACATGGGCAGAAACGATTCCTTCTGC.........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TACAATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TACAATTTTACCAAAGA-------------------------CACTAGAT...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGTTATATAC--TTTTCAG----------CGATCTTGTA.................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACGTTCAT--------ACGAATGG----ACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TACTTAACATGGGCAGAAACGA...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TAC--TTTTCAG----------CGATCTTGTATACAAT...........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................TAT------ATACTTAACATGGGCAGAAACGA...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............T--------ACGAATGG----ACAGACGGACAGGGC----CA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TATAT------ATACTTAACATGGGCAGAAAC.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CATGGGCAGAAACGATTCCTTCTGCC........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TTGTATACAATTTTACCAAAGA-------------------------CAC....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGTTATATAC--............................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTTCAG----------CGATCTTGTATACAATT..........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCGACGTTCAT--------ACGAATGG----ACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATTTTC...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TACTTAACATGGGCAGAAACGAT..................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTTCAG----------CGATCTTGTATACAATTTT........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CAATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AAT...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAT--------ACGAATGG----ACAGACGGACAGGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAT--------ACGAATGG----ACAGACGGACAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCAAGAATATAT------ATACTTAACATGGGC...........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATGG----ACAGACGGACAGGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............TCAT--------ACGAATGG----ACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ACATGGGCAGAAACGATTCCTTCTGC.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGG----ACAGACGGACAGGGC----CATAT.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............T--------ACGAATGG----ACAGACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGACGTTCAT--------ACGAATGG----ACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACGTTCAT--------ACGAATGG----ACAGACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTCAT--------ACGAATGG----ACAGACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............T--------ACGAATGG----ACAGACGGACAGGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TGGGCAGAAACGATTCCTTCTGCCTGT.....................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATGG----ACAGACGGACAGGGC----C.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................ATATCGACTCGGCTATTGATC................................................................................................................................................................................................................................................................................................................................................................................................2180.7560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000010000000000000000000000010000000000001000000000000000
.........................................................................................................................ATTCCTTCTGCCTGTTAT..................................................................................................................................................................................................................................................................................................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CATATCGACTCGGCTATTGA..................................................................................................................................................................................................................................................................................................................................................................................................2050.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCAT--------ACGAATGG----ACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGTTAT..................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGCCTGTTATATAC--TTTTCAG----------A..........................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTCCTTCTGCCTGTTATATA...............................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCCTTCTGCCTGTTATATAC--TTTTCAG----------A..........................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GAAACGATTCCTTCTGCCTGTTAT..................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGTTATA.................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTCGACGTTCAT--------ACGAATGG----A........................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GATTCCTTCTGCCTGTTATATAC--TT..........................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGTTATATAC--TT..........................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATCGACTCGGCTATTGATC................................................................................................................................................................................................................................................................................................................................................................................................2090.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ACTCGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................26200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTCCTTCTGCCTGTTATATAC--TTT.........................................................................................................................................................................................................................................................................................................................2450.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CATATCGACTCGGCTATTGAT.................................................................................................................................................................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................TATCGACTCGGCTATTGATCC...............................................................................................................................................................................................................................................................................................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................................TCGGCTATTGATCCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................19200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCGACTCGGCTATTGATCCTG.............................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000001000000300000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TAA-----------------TTCTAGAATTATTC---------------------------------------------------------------------------------------------------------------TAGTGTC-----------2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCGGCTATTGATCCTGATCAAGAATA...................................................................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................TCGACTCGGCTATTGATCCTGATCA.........................................................................................................................................................................................................................................................................................................................................................................................25200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TATTGATCCTGATCAAGAATAT..................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATCGACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATCGACTCGGCTATTGATCCTGAT...........................................................................................................................................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................C----CATATCGACTCGGCTATTGA..................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATCCTGATCAAGAATATAT------ATACTTA...................................................................................................................................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATCGACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................................................................CCTGATCAAGAATATAT------ATACTTA...................................................................................................................................................................................................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCCTGATCAAGAATATAT------ATACTT....................................................................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ATTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AA....................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................TCGGCTATTGATCCTGATCAA........................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTCCTTCTGCCTGTTATATAC--TTTTCA......................................................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCCTTCTGCCTGTTATATAC--TTTTC.......................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AAT...................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCCTTCTGCCTGTTATATAC--TTTT........................................................................................................................................................................................................................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTCCTTCTGCCTGTTATATAC--............................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CGACTCGGCTATTGATCCTG.............................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...........................................................TCGACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
..........................................................................ATCCTGATCAAGAATATAT------AT........................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000
...............................................................................................................................TCTGCCTGTTATATAC--TTTTCA......................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATATCGACTCGGCTATTGATCC...............................................................................................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGCCTGTTATATAC--TTTTCA......................................................................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................G----ACAGACGGACAGGGC----CA....................................................................................................................................................................................................................................................................................................................................................................................................................18160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000
.......................................................CATATCGACTCGGCTATTGT..................................................................................................................................................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AAAGA-------------------------CACTAGAAT--------------------------------------------------------AATTTT................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATATCGACTCGGCTATTGAT.................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................TCCTGATCAAGAATATAT------ATACT.....................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCGACTCGGCTATTGATCCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AA....................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CTCGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTATTGATCCTGATCAAGAAT....................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATCGACTCGGCTATTGAT.................................................................................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ATTGATCCTGATCAAGAATATAT------A.........................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATCGACTCGGCTATTGA..................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GAAACGATTCCTTCTGCCTGT.....................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AAGA-------------------------CACTAGAAT--------------------------------------------------------AATTT.................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACGATTCCTTCTGCCTGT.....................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATATCGACTCGGCTATTGATA................................................................................................................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................ACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATT..................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CCTGATCAAGAATATAT------ATACT.....................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CTGATCAAGAATATAT------ATACT.....................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................CGACTCGGCTATTGATCC...............................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................CAAAGA-------------------------CACTAGAAT--------------------------------------------------------AATT..................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCGACTCGGCTATTGATCCTGATCAAGA......................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TGATCAAGAATATAT------ATACTT....................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TTTTACCAAAGA-------------------------CACTAGAAT--------------------------------------------------------......................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..........................................................................ATCCTGATCAAGAATATAT------ATAC......................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCGGCTATTGATCCTGATCAAGAA.....................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTGATCCTGATCAAGAATATAT------ATACTT....................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAC-TCCGACGTTCATA----GCGACAGACAG----ACAGTCGGACATGGTCAGTCAAATCGACTCAGATATTGATCCTGATCAAGAATATATGTACATATACTTTATGTGGTGGGAAACGATTCTTTCTACGTGTAACACAG--C---GAGTAAAGTCAAA-----------------------------------ACCATG--------TG-----A-----ATCGTATAAAA-C---T---------------G-----TATAACAAA----CTGTAGTCATG--TATA---------TGAAAA---------TG------TGTTGCTAAT------GTTTTA----------------------------------------------------------CGGTGAG----T----TTGTACGTTACATTTA-------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AGATCTCAGCGTTCATA----CGGACGGAGAG----ACAGACGGACATGGC----CAGATCGACTCGGCTATTGATCCTGATCAGGAATATAT------ATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTTTATAC--TTTTTAA----------CGA-----------------------ATCTAGTGTAACCTTTAACTC--AAC----GAGTAACGAGTGTAAAAATA---------------TATA-----------------------------------------------------------------GAAATGT---AT------GTAAGT----------------------------------------------------------TAACAAATCACT----TCGT-------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................G----ACAGACGGACATGGC----CAGATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................26201.0521002100000000
.........................................CGGACATGGC----CAGATCGACTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000000000
......................................................................ATTGATCCTGATCAGGAATAT..................................................................................................................................................................................................................................................................................................................................................................................21150.07100000010000
......................................AGACGGACATGGC----CAGATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000010
..ATCTCAGCGTTCATA----CGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
...TCTCAGCGTTCATA----CGGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
..............................AG----ACAGACGGACATGGC----CAGA..................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001000000
droEug1
AGATCTCAGCGTTCATACGGACAGACGGACGG----ACAGACGGACATGGC----TCAATCCACTTCGCAATTCATCCTGATCAAGAATATATATAC--ATACTTTATAGGGTCGGAAACGCTTCCTTCTACATGTTACATAC--TTTTCAA----------CGA-----------------------ATTTAGTATTCCCTCTTACTC--TAC----GAGAAATGGGTATAAAAAT----------------------------------------TTGATTTTA--------------------------------TTGAGAAATT----GT------GTAGTA----------------------------------------------------------AACTGGACCGCAAAGTGCATAAGATATCGTCAATATTATCGGAGTT-----------SizeHit CountTotal NormTotal
No Reads
droBia1
AGACTTCAGCGTTCAT------------ACGGTTTTACAGGCGGACATGGC----TAGATCGCCTCGGCTAGTGAACCTGATCAAGAATATTT------ATACTTCATGGGGTCGGAAACGCTTCCTTCTAACTGATTCATTG-----------------------------------------------------------CTTAGTC--TAC----AAGTAACGGATATAGAAATA---------------AATG-----GAT--------------------A---------------TGAAAAAATTATATCTA------------TGGT------GTTTTT----------------------------------------------------------TAACATATAACC----TTCTACGCTG-------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGATCTCAGCGTTCATA----CGGACGGACAG----ACAGACGGGCATTGC----TAGATTGACTTGGTTAGTGACCCTGATCAAGAATCTAT------ATACTTTATGGGGTCGGAAACGCTTTTTTCTATCTGTTACATAC--GTTTGCA----------CGA-----------------------ATACAATATACCCTTTTACTC--TAC-----------GAGTATGAATAC--------------TCTAAA-ACAAAGT------CTCC-----------TCA---ATTTCGTAA-----TACTCACATTTT------------GG------------------------------------------------------------------------------------------GTGTGTTGTCTTCGGTGGACTCCGAGTTGGA--------SizeHit CountTotal NormTotal
No Reads
droEle1
C---------------------GTAGAAACGT----ATAGACGGACATGGC----TTGATCGACTTTTCTAGTGATGCCGATCAAGAATATAT------ATACTTTATAGGGTCGGGAATGCCTCATTCACTGCGTTGCAAAC--TTCTGAC----------TGG-----------------------TATAATAGAACCCTC--------TGC----A-----AATGTATGTATCT----CTTGTAAAGAAAAATAA-ATGTAT----------------------------------------------------------------ATCAT------GTCAAA-------TACAAATGTT--------ATG------------------------------CATTATTT--------------------TACTTCATGTTTGTAGTTGAA--------SizeHit CountTotal NormTotal
No Reads
droRho1
G-------------------ACGGACAGACGG----ACAGACGGACATGGC----TAGATCGACTCTCCTGGTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCGTTACAAAC--TGTTGAC----------TGA-----------------------AATTATAATACCCTC--------TGC----A-----AGGGTATAATAAA--------------------------------------ATATAATACTT--------------------------------TATGAGCTCTGTGCAC------GTCATA----------------------------------------------------------TGACAA----------TTGTAAATCG----------ACCCAGAGCCATAAACTATGASizeHit CountTotal NormTotal
No Reads
droFic1
G-------------------ACAGACAGACAG----ACGTACAGACGTACA----TATTTCGATTCAGATGGTGATGCTGATCAGGAATATAT------ATACTTTATGGGGTCGGAGGTGTCTCCTTCACTGCGTTGCAAAC--TTCTTAC----------TGA-----------------------AATTACAATACCCTC--------TGC----A-----AAGGTATAACAAG--------------------------------------C--CAATAAAA--------------------------------C---------ATGCA------------------------AGTATT--------TCGACTTAAGC--------------AA--A---TAGCAAATCA-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
G-------------------ACAGACAGACGG----ACAGACGGACATGGC----TAGATCGACTCGGCTGTTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAAC--TTCTGAC----------TGA-----------------------AATTATAATACCCT----------GC----A-----AGGGTATAAAAACA-AC---------------AT-ATGGAG----------------------------------------------------------------AACAT------ATTAAT--TTATGTACAT-----TTTCTTAT--------------------------GATAATATAGA-----AAC----CTGTGCAT-GCTTTCATTATG--------------------SizeHit CountTotal NormTotal
No Reads
droAna3
G-------------------ACGGACAGACGG----ACAGACGGACATGCT----CATATCGACTTTGGAGGTGATCCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACAC--TTTTGAC----------CAA-----------------------AATTATAATACCCTC--------TGC----A-----AGGGTATAATGAA------------------------------------------------------------------------------------------TATGCA------------------------AATATT--------TATGATTAAAAATAGTTTTGTTGTT--------TTTCAAAGTACA----AGGTGCGT---------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................TGCGTTGCACAC--TTTTGAC----------CAA-----------------------AATT.............................................................................................................................................................................................................................................................................26200.306060000
................................................................................ATCAAGAATATAT------ATACTTTATAGGGTC...........................................................................................................................................................................................................................................................................................................................................................28200.051000001
......................GGACAGACGG----ACAGACGGACATGCT----......................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
....................................................................................................................AGATGTCTCCTTCACTGCGTTGCA.................................................................................................................................................................................................................................................................................................................................24200.051100000
...............................G----ACAGACGGACATGCT----CATATCGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................27200.051000001
droBip1
AGATCCACGCGTTCATA----CGGACGGACGG----ACAGACGGGCACGGC----TATATCGACAAGGCTGTTGGAGATGATCAAGAATATAT------GTACTTTATGGGGTCGGAGATGATTCCATCTCTATGTTACATAC--ATTCACA----------AGA-----------------------CTACAAAATACCCGTATACTC--TAC----GATTACCGGGTATAAAAAAG-AT------------------------------------GTATTTTTC--------------------------------CAGGGAAAGCGTTAAG------CTTATA----------------------------------------------------------AAGCAGACAAAA----TTATGCGTGGACTACA-------------------------SizeHit CountTotal NormTotal
No Reads
dp5
A----------------------------CGG----ACAGACAGACAGGGC----TCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACAC--ATCCAC--------------------------TTTTACCACAAATCTAATATACCCCAATACTCATTTT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GATTCAAGAAAAAATCCTA----------------------------------------------------------GACAAACTATCA----CTGAAGGTGGACTACCCCAAACAAGGATTTGGAAAC-ACAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................T----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GATTC.................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................T----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GATTCT................................................................................................................................2621.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------GACAAACTATCA----CTGAAGGTGGA..............................2440.5020100010000
............................................................................................................................................................................................................................................................................................................................................AAGAAAAAATCCTA----------------------------------------------------------GACAAACTATCA----CT.......................................2820.5010001000000
.....................................................................................................................................................................................................................................................................................................................................................TCCTA----------------------------------------------------------GACAAACTATCA----CTGAAGGTGGAC.............................2920.5010100000000
.......................................................................................................................CGATTCCTTCTGGACGTTACACAC--A...........................................................................................................................................................................................................................................................................................................................25200.4590000000900
....................................................................................................................................................................................................................TT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GAT...................................................................................................................................2460.3320200000000
..................................................................................................................................................................................................................TTTT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GAT...................................................................................................................................2650.2010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACTATCA----CTGAAGGTGG...............................2150.2010100000000
...................................................................................................................................................................................TTACCACAAATCTAATATACCCCAAT................................................................................................................................................................................................................................................................26200.2040000400000
............................................ACAGGGC----TCAATCGACTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000040
..................................................................GGCTATTGATGCTGATCAAGAATA...................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000300
.........................................CAGACAGGGC----TCAATCGACTCGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000300
........................................................................................TATAT------ATACTTTATAGGGTCGG.........................................................................................................................................................................................................................................................................................................................................................22200.1530100000020
................................................................................................................TCGGAAACGATTCCTTCTGGACGTTACAC................................................................................................................................................................................................................................................................................................................................29200.1530000000300
....................................................................................................................................................................................................................TT----GAGTATCGGGTATAAAAA.................................................................................................................................................................................................................................20200.1530300000000
.........................................................................................................................ATTCCTTCTGGACGTTACAC................................................................................................................................................................................................................................................................................................................................20200.1530000003000
.....................................................................................................................................................................................................................T----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GA....................................................................................................................................22190.1120000000020
......................................AGACAGACAGGGC----TCAATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
A----------------------------CGG----ACAGACAGACAGGGC----......................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000200
.......................................................................................................................CGATTCCTTCTGGACGTTACAC................................................................................................................................................................................................................................................................................................................................22200.1020000000200
................................................................................................................TCGGAAACGATTCCTTCTGGT........................................................................................................................................................................................................................................................................................................................................21200.1020200000000
...................................................................................................................................................................................TTACCACAAATCTAATATACCCCA..................................................................................................................................................................................................................................................................24200.1020000200000
...............................................................................................................................................................................................................TCATTTT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------G.....................................................................................................................................27200.1020000000200
...............................................................................................................GTCGGAAACGATTCCTTCT...........................................................................................................................................................................................................................................................................................................................................19200.1020200000000
....................................................................................................................................................................................................................TT----GAGTATCGGGTATAAAAAT------------------------------------------------------------------------------------------GA....................................................................................................................................23190.0510000000100
...........................................................................................................TAGGGTCGGAAACGATTCCTTCTGGACGT.....................................................................................................................................................................................................................................................................................................................................29200.0510000100000
........................................ACAGACAGGGC----TCAATCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...............................G----ACAGACAGACAGGGC----TCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................GTCGGAAACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................24200.0510010000000
......................................................................................................CTTTATAGGGTCGGAAACGAT..................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............................................................................................................................CTTCTGGACGTTACACAC--ATCCAC--------------------------T...........................................................................................................................................................................................................................................................................................25200.0510100000000
..........................................................................................................................................CACAC--ATCCAC--------------------------TTTTACCACAAA................................................................................................................................................................................................................................................................................23200.0510100000000
........................................................................TGATGCTGATCAAGAATATAT------ATAC......................................................................................................................................................................................................................................................................................................................................................................25200.0510000000010
..........................................................................................................................................CACAC--ATCCAC--------------------------TTTTACCACA..................................................................................................................................................................................................................................................................................21200.0510000001000
.................................................................................................................................................ATCCAC--------------------------TTTTACCACAAATC..............................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................TCTAATATACCCCAATAC..............................................................................................................................................................................................................................................................18200.0510000100000
.....................................................................................................................AACGATTCCTTCTGGACGTTA...................................................................................................................................................................................................................................................................................................................................21200.0510000100000
........................................................CAATCGACTCGGCTATTGATGCTGA............................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
.............................................CAGGGC----TCAATCGACTCGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..............................GG----ACAGACAGACAGGGC----TCA...................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
..............................................................................................................GGTCGGAAACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................25200.0510010000000
.........................................CAGACAGGGC----TCAATCGACTC...........................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
droPer2
G-------------------ACGGACAGACGG----ACAGACAGACATGGC----TCAATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACAC--ATACAC--------------------------TTTTACCACAAATCTAATATACCCCAATACTCATTTT----GAGTATCGGGTATAAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCACT----TTATGCTTAAACTT---------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................CCAATACTCATTTT----GAGTATCGGG.........................................................................................................................................................................................................................................24200.153030000
.......................GACAGACGG----ACAGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000020
........................................................................................TATAT------ATACTTTATGGGGTCG..........................................................................................................................................................................................................................................................................................................................................................21200.051001000
droWil2
G-------------------ACGGACGGGCGG----ACAGACGGACATGGC----TATATCAACTCAGCTTCTCATGCTGATCAAGAATTTAT------ATACTTTATGGGGTCGTAAACGCCTCCTTCTGTGCGTTACGAAC--ATCTGAC----------CAA-----------------------TTTTACAATACCCTC--------TGC----A-----AGGGTATAAAAAG--------------TAAATA-AAAATGT------ATCA-----------CAA---AATATATA-------------------------------------------------------------------------------------------------------------AAAAGCA----TTATGAAAAACTTCGACCAAGCTGGGAGTCGAACCCT----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAAAACTTCGACCAAGCTGGGA..............26200.7014000140
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAGCTGGGAGTCGAACCCT----2240.50220000
................................................................................................................................CTGTGCGTTACGAAC--ATCTGAC----------CAA-----------------------TT...............................................................................................................................................................................................................................................................................27200.40800080
............................................ACATGGC----TATATCAACTCAGC........................................................................................................................................................................................................................................................................................................................................................................................................21200.30606000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCAAGCTGGGAGTCGAACCCT----2540.25101000
.........................................................................................TTAT------ATACTTTATGGGGTC...........................................................................................................................................................................................................................................................................................................................................................19200.15300030
........................................................................TCATGCTGATCAAGAATTTAT------ATACT.....................................................................................................................................................................................................................................................................................................................................................................26200.15302010
....................................................................................................................................GCGTTACGAAC--ATCTGAC----------CA.........................................................................................................................................................................................................................................................................................................20200.10202000
...............................................TGGC----TATATCAACTCAGCTTCTCAT.................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAAAACTTCGACCAAGCTGGG...............24200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CA----TTATGAAAAACTTCGACCAAGC...................24200.10202000
.................................................................................................................CGTAAACGCCTCCTTCTGTGC.......................................................................................................................................................................................................................................................................................................................................21200.10200002
............................GCGG----ACAGACGGACATGGC----TATA..................................................................................................................................................................................................................................................................................................................................................................................................................23190.05101000
.........................................................................................TTAT------ATACTTTATGGGGTCGTAAAC.....................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................TCTGTGCGTTACGAAC--ATCTGAC----------CA.........................................................................................................................................................................................................................................................................................................25200.05101000
.............................................................................................................................................................................................TTTACAATACCCTC--------TGC----A-----AGGGTA.......................................................................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGACCAAGCTGGGAGTCGA.........21200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGACCAAGCTGGGAGTCGA.........23200.05100010
..............................................................................TGATCAAGAATTTAT------ATACTTTATG................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................TCTGTGCGTTACGAAC--ATCTGAC----------CAA-----------------------.................................................................................................................................................................................................................................................................................26200.05110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTCGACCAAGCTGGGAGTCGAA........27200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTTCGACCAAGCTGGGAGTC...........24200.05100010
.........................................................................................................................CCTCCTTCTGTGCGTTACGAAC--............................................................................................................................................................................................................................................................................................................................22200.05100010
...................................................................................................................................TGCGTTACGAAC--ATCTGAC----------CAA-----------------------TTTT.............................................................................................................................................................................................................................................................................26200.05100010
...................................................................................................ATACTTTATGGGGTCGTAAACGCC..................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................AT------ATACTTTATGGGGTCGTAAAC.....................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................CTTTATGGGGTCGTAAACGCCTCCT..............................................................................................................................................................................................................................................................................................................................................25200.05101000
.................................................................CAGCTTCTCATGCTGATCAAGAATT...................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
droVir3
CA-TC----------TA----CGGACGGACAG----ACGGACGGACATGGC----TAGATCGACTCGGCTATTGATGCTGATCAAGAATATAT------ATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTATTACATAC--ATTTGG--------------------------ATTTTGCACAAATACAATATACCCTTATACCCATATTTAATGGGTTCAGGATATAAAAAT------------------------------------------------------------------------------------------TATATGA------GTCCT--------------------------CA-------------------------------TAGCCAAGTACA---------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................TAC--ATTTGG--------------------------ATTTTGCACAAATACAAT..........................................................................................................................................................................................................................................................................27200.75150000000000000000000000000001500000000000000000000000000000000000
..........................................................................................................ATGGGGTCGGAGATGCTTCCT..............................................................................................................................................................................................................................................................................................................................................21200.255000000004000000000000000000000000100000000000000000000000000000
............................................................................................................................................TAC--ATTTGG--------------------------ATTTTGCACAAATA..............................................................................................................................................................................................................................................................................23200.204000000000000000000004000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------TATATGA------GTCCT--------------------------CA-------------------------------TAGCCAAGT................................................2470.141000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................TATGGGGTCGGAGATGCTTCC...............................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000020000000000000000000000000000000
..................................................................................CAAGAATATAT------ATACTTTATGGGG.............................................................................................................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CTTCCTTCTGCCTATTACATAC--ATT.........................................................................................................................................................................................................................................................................................................................25170.061000000000000000000000000001000000000000000000000000000000000000
...............TA----CGGACGGACAG----ACGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061000000000000000000000000000010000000000000000000000000000000000
...............TA----CGGACGGACAG----ACGGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061000000000000000000000000000010000000000000000000000000000000000
....................................................................CTATTGATGCTGATCAAGAATAT..................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................TAT------ATACTTTATGGGGTCGGA........................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................GAATATAT------ATACTTTATGGGGTCGGAG.......................................................................................................................................................................................................................................................................................................................................................27200.051000100000000000000000000000000000000000000000000000000000000000
...............................................................................GATCAAGAATATAT------ATACTTTATGGGG.............................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................TGGGGTCGGAGATGCTTCCTTCT...........................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000100000000000000000000000000000
droMoj3
AAATCGACGCGTTCAT--------ACATACGG----ACAGACGGACAGGGC----AAAATCGACTCAGCTCGTCGCCCTGATCAAGAATATAT------ATACTTTATGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATAC--ATTTCAA------CAAA--------------------------ACCATTATACCCTGATTTCCCATTGAAAATAGGTTCAGCGTATAAAAAG------------------------------------------------------------------------------------------C---------------GTATTTCAAATACAAGA-----------------------------------------------------GAC----TTGTGCT-----TAGGCCATTCACGAATTTGAATGTTATGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........TTCAT--------ACATACGG----ACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................21200.55110000011
........................................................................................................................................................................................................................................................................................................................................................TATTTCAAATACAAGA-----------------------------------------------------GAC----T........................................20130.081000010
............................................................................................................................................................................................................................................................................................................................................................TCAAATACAAGA-----------------------------------------------------GAC----TTGTGCT-----T............................23140.071100000
.........................................................................................................................................ACATAC--ATTTCAA------CAAA--------------------------ACCATTATAC.......................................................................................................................................................................................................................................................................27200.051100000
....................................................................................................TACTTTATGGGGTCTGCCACGCCT.................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................AATCGACTCAGCTCGTCGCCC...............................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
..........................................................................................................ATGGGGTCTGCCACGCCTCC...............................................................................................................................................................................................................................................................................................................................................20200.051100000
...................................................................................................................................................TTCAA------CAAA--------------------------ACCATTATACCCTGA..................................................................................................................................................................................................................................................................24200.051100000
............................................................CGACTCAGCTCGTCGCCCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
droGri2
AGATCTGTGTGTTCAT--------------AG----ACAGACGGACATGGC----CATATCGACTCGGCTGTTGACCCTGATCAAGAATATAT------ATACTTTATGGGGTCGGGGATGCTTCCTTCTGTCTGTTACAGAC--ATTTGCA------CAAA--------------------------ACCAATAAAACCTTTTTACCGATTTTTAATATGTTCAGGGTATAAAAAT------------------------------------------------------------------------------------------GCT-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:49 PM