ID:

dsi_8025

Coordinate:

3l:7601242-7601391 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACAGACCCGAAAATGGACGACGAGAGCGACGACAAGGATGATACGAAAAGGTAAATTCACTAGACATTTAGTACCCACACTCATGCATTCGTTAGATGATAGCACAAATCCGTGGGCCATCTGCAGGTGACAGTTGACAAGAAGTAAAAGAATAGACGTGTATATGGCGTGCTGGCAAATTTTCCACTAGGTGAAAGTGAAATGTCCCCCCCTTATTTATTATTTCATCCGATGAATAACTGTATTAAGA ************************************************......(((((...((((((((...........(((..((((...))))..))).....(((((.(((((.((((.((........((.....))..........)).)))).))))).))).))..........))))))))..)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	M024 male body	SRR618934 dsim w501 ovaries
......CCGAAAATGGACGACGAGAGC...............................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0
.....................GAGAGCGACGACAAGGATGAT................................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0
.......................................................................................................ATAAATCCATGGGCCATC.................................................................................................................................	18	2	7	0.14	1	0	0	1
......................................TGAAACGAAAAGGTAAA...................................................................................................................................................................................................	17	1	8	0.13	1	0	0	1
.................................................................................................................................................AAAAGAATAGACATGTCT.......................................................................................	18	2	8	0.13	1	1	0	0

Anti-sense strand reads

TGTCTGGGCTTTTACCTGCTGCTCTCGCTGCTGTTCCTACTATGCTTTTCCATTTAAGTGATCTGTAAATCATGGGTGTGAGTACGTAAGCAATCTACTATCGTGTTTAGGCACCCGGTAGACGTCCACTGTCAACTGTTCTTCATTTTCTTATCTGCACATATACCGCACGACCGTTTAAAAGGTGATCCACTTTCACTTTACAGGGGGGGAATAAATAATAAAGTAGGCTACTTATTGACATAATTCT ************************************************......(((((...((((((((...........(((..((((...))))..))).....(((((.(((((.((((.((........((.....))..........)).)))).))))).))).))..........))))))))..)))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	SRR553487 NRT_0-2 hours eggs	SRR902009 testis	SRR553486 Makindu_3 day-old ovaries	O001 Testis	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	O002 Head
...........................CTGCTGTTCCTACTATGCTTTT.........................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0
...................................................................................AGGTAAGCAATGAACTATCG...................................................................................................................................................	20	3	5	0.20	1	0	0	1	0	0	0	0	0
......................................................................................................GTGTTTAGGCTCCCGGGA..................................................................................................................................	18	2	6	0.17	1	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................................CGGGGGAATAAATAGTAA..........................	18	2	9	0.11	1	0	0	0	0	1	0	0	0
............................................................................................................................................................................AGGGTTCAAAAGGTGATCCA..........................................................	20	3	9	0.11	1	0	1	0	0	0	0	0	0
.............ACATGCTGCTGTCGCTGTTGT........................................................................................................................................................................................................................	21	3	9	0.11	1	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................ACAGGGGGGGATGAGATAA.............................	19	3	10	0.10	1	0	0	0	0	0	1	0	0
...........TTCCCTGCAGCTCTCGC..............................................................................................................................................................................................................................	17	2	12	0.08	1	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................AAGGTGATGCAGTGTCACT..................................................	19	3	14	0.07	1	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................AACGGGGGAATAAATAGTAA..........................	20	3	17	0.06	1	0	0	0	0	0	0	0	1
.............ACTTGCTGCTGTCGCTGTTGT........................................................................................................................................................................................................................	21	3	20	0.05	1	0	0	0	1	0	0	0	0

Generated: 04/24/2015 at 10:25 AM