ID:

dsi_8003

 Coordinate:

x:19974047-19974196 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.9 -24.9 -24.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACAGGCGCCACAGCACGCACAAACACACACGCACAGCTGATCTATCTTGCTCTCGCTCTGGAAATTTGTAAACAACTCAATATCGCAAAAACCAGAGCTGCCAATTAGTTTTTTATTTTCCAGACACACTGGCAGCGCCATTTTCTTGCATTTGTGAAACTCACCCACTAAAAAGCACTGACATTTTTCCATAATTGCAGCGTAATATGTTCGAGGATCGGGACTAGACAAGTAGGTGGAAAACGAAAGC
**************************************************.....((((((...(((((...............)))))..))))))((((((....((((..........))))....))))))..........(((((.(((((.................................))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
............................................................................................................................................................................................................ATATGTTCGAGGATCGGGACT......................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGAGGATCGGGACTAGACAA................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................CTTGCATTTGTGAAACTCACC..................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TCGAGGATCGGGACTAGAC..................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................TCGGGACTAGACAAGTAGGTGGAAAACGAAA.. 31 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................TTCGAGGATCGGGACTAG....................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................ACACGCACAGCTGATCTATCTTG......................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGCGTAATATGTTCGAGGATCGGGA........................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................TTCGAGGATCGGGACTAGACAAGT................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................AATATGTTCGAGGATCGGGAC.......................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................ATCGTAATATGTTCGAGGATCGGGACT......................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................GTTCGAGGATCGGGACTAGG...................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GAGGATCGGGACTAGACAAGTAGGTG............ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TAGACAAGTAGGTGGAAAACGAAAGC 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................TGCCAATTCGTCGTTTATTTTC.................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0
.....................AACACACACGCACAGCTG................................................................................................................................................................................................................... 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAGGCAACTAGGTGGA.......... 16 2 20 0.15 3 0 0 0 0 3 0 0 0 0
........................................................................................................................................ACCATTTTCTTGCATT.................................................................................................. 16 1 16 0.13 2 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................................ATATGTCCGAGGATCGTAAC.......................... 20 3 12 0.08 1 0 0 0 0 0 1 0 0 0
..................................................................................................TGCCAATTCGTCGTTTATTTT................................................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................CGGAATATGTCTGAGGATC............................... 19 3 16 0.06 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................GCGCCATCTCCTTGCAT................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................TGAAACTCACCCAGGAA............................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGTCCGCGGTGTCGTGCGTGTTTGTGTGTGCGTGTCGACTAGATAGAACGAGAGCGAGACCTTTAAACATTTGTTGAGTTATAGCGTTTTTGGTCTCGACGGTTAATCAAAAAATAAAAGGTCTGTGTGACCGTCGCGGTAAAAGAACGTAAACACTTTGAGTGGGTGATTTTTCGTGACTGTAAAAAGGTATTAACGTCGCATTATACAAGCTCCTAGCCCTGATCTGTTCATCCACCTTTTGCTTTCG
**************************************************.....((((((...(((((...............)))))..))))))((((((....((((..........))))....))))))..........(((((.(((((.................................))))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................................................TCGGAACTGTAGAAAGGTATTAA...................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0
...CCGCGGTGTCGTGCGTGTTTG.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................................................................TGACCACTTTGAGTGGGT................................................................................... 18 2 2 1.00 2 2 0 0 0 0 0 0
................................................................................................................................................................AGGGGGTGATTTTTCG.......................................................................... 16 1 3 0.67 2 0 2 0 0 0 0 0
......................................................................................................................................CGCGGTAGAGGAACGTA................................................................................................... 17 2 19 0.26 5 5 0 0 0 0 0 0
................................................................................................................................................................AGTGGGTGATTTCTCG.......................................................................... 16 1 4 0.25 1 0 1 0 0 0 0 0
...................................................................................GCGTGTTTGGTCTCG........................................................................................................................................................ 15 1 5 0.20 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGGTAATAAGGTCGCATT............................................. 18 2 7 0.14 1 0 0 0 0 1 0 0
..............................................................................................................................................................AGAGGGGGTGATTTTTCG.......................................................................... 18 2 9 0.11 1 0 1 0 0 0 0 0
....................................................AGCGAGCCCTTTAAA....................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 1 0
......................................................................................................................AGGTTTGTGTGACCG..................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 1
...............................................................................................................................................................GAGGGGGTGATTTCTCGA......................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19973997-19974246 + dsi_8003 ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TTGCTC--------------TC--G---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAACTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTG--ACATTTT------TC-C-------------ATAATTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GC
droSec2 scaffold_8:3548384-3548633 + ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TTGCTC--------------TC--G---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAACTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTA--ACATTTT------TC-C-------------ATAATTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GC
dm3 chrX:21240516-21240768 + ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------GT--C--TTGCTC--------------TC--G---CACT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTTTTTTA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAATTTACCCA-CTAA--A------AA---ACA--------------------------------------------------GTG--ACATTTT------TC-C-------------ATACTTGCAGCG--TAATATG--TTTGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GC
droEre2 scaffold_4690:17771108-17771363 + AAAGGCGTCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TCGCTCG------CTC--TCTT--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AATCCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGCCACACTGGCAGCGCCGT-------TTTCTTGCATTTGTGAAATTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTT--AAATTGT------TC-C-------------ATACTTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAA----T-AGGT------------GGAAAACGAAA---GC
droYak3 X:20419596-20419851 + AAAGGCGTCACAGCACGCACAAA---------------------------------------------------CACACATGCACAGCTGATCT----------------------------AT--C--TCGCTCT------CTTTTTTTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTT----CA----------------------------------------------------TTTTCCAGCCACACTGGCAGCGCCGT-------TTTCTTGCATTTGTGAAATTCACCCA-CTAA--A-------A---TCA--------------------------------------------------TTG--AAATTTT------TC-C-------------ATACTTGCAGCG--TAATATG--TTCAAGGATCGTGACTAGACAAA----T-AGGT------------GGAAAAAGAAA---GC
droEug1 scf7180000408193:233153-233408 - A--GGCGTCACAAAACGCACA-----------------------------------------------------TACACATGCACAGCTGATCT----------------------------CT--C--TTGCTAT------CCC--TTTC--T---CTCT-GGAAAT--TTGTAAACAACTCGATGTCGCAA-AATCCAGAGCTGCCAATTAGTTTT-----------------------------------------------------------TTTCCAGCCATATTGGCAACGCCAT-------TTTCTTGCATTTGTGAAATTCACCTA-CTAAAAA------AA---GTA--------------------------------------------------CAAACAACTTTT------TC-T-------------ATATTTCCAGCA--TAGTATG--TTTGAGGATCGCGACTAGACAAATACAT-AGGT------------GGAAAACGAAA---AC
droBia1 scf7180000302432:369939-370185 - GAAGGCGTCACAGCACGCA-------------------------------------------------------CACACAGGCACAGCTGATCT----------------------------CT--A--TCGCTGT------CTC----CT--T---CTCT-GGAAAT--TTGTAAACAACTCAGTGTCGCAA-AATCCAGGGCTGCCAATTAGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCAT-------TTTCGTGCACTTGTGGAATTCACTCT-CTAA--A------AA---GCA--------------------------------------------------A---TATCTTCT------TC-C-------------ACAATTGCAGCG--TATTATG--TTCGAGGATCGGCACTAGGCGAG----A-AGGA------------GCAAAACCATG--TTC
droTak1 scf7180000415769:191436-191716 - CA--------GCGCACGCACA-----------------------------------------------------TACACAAGCACAGCTGATCT-----------------------------T--C--TCGCTCGCTCCATCTC--TTTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTGGTTTTTTTTTT---------------------------------------------TTGTATTTCTTCCAGCCACATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTCACTCT-CTAA--AACAAAAAC---GTA--------------------------------------------------CA--CAACTTTT------TCGA-------------ATACTTTCAGCG--TAATATG--CTCGAGGATCGGGACTAGAAAGA----TAAGGTGGAAAGGGAAAAGGAAAACGAAA---GC
droEle1 scf7180000491087:1166751-1167002 - AAAGGCGTCACAACAAGCACACA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------CT--TTCTTT----------CTC--TGTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCTCAA-AAAGCAGAGCTGCCAATTAGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTCATCAA-CTAA--A------AA---GTA--------------------------------------------------CA--CAACTTTT------TC-C-------------TTACTTCTAGCG--TAATATG--TTCGAGGATCAGGACTAGACAAA----AAAGGT------------GAAAAATAAAA---AC
droRho1 scf7180000779980:49137-49385 - AAAGGCGTCACAACAAGCACA-----------------------------------------------------CACACACGCACAGCTGATCT----------------------------CT--CTCTAT----------CTC----TG--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCTCAA-AAAACAGAGCTGCCAATTGGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCGT-------TCTCTTGCATTTGTGAAATTCACCCA-CTAA--A------AA---GTA--------------------------------------------------CGCACAACTTTT------TT-T-------------TTACTTTCAGCG--TAATATG--TTCGAAGATCGGGACTAGAAAAT----T-AGGT------------GGAAAACGAAA---GC
droFic1 scf7180000453926:217498-217757 + GGGGAAGTCAT------CAC--A---------------------------------------------------CACACAAGCACAGCTGATCTCTTCCCATCCTTCTTTCTTTAT------CT--CTCTCT----------CTC----TC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCACGAAGCCAGAGCTGCCAATTAGTTTTT---------------------------------------------------------TTCTCCAGCCAGATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTTACCAA-CTAA--A-------A---GTA--------------------------------------------------TCCACAACTTTT------CC-C-------------TCAATTTCAGCG--TAATATG--TTCGAGG------ACTAGACATA----T-AAGT------------GGAAAACGAAA---GC
droKik1 scf7180000302586:298834-299178 + CAA-------CA----GCACAAA---------------------------------------------------CACA----CACAGCTGATAGCGCACTGT----------TTAGCCCTCTCTGTC--TCTC----------------TTTCGATCTGCTCAGAAATTTTTGTAAACAACTCAATATCGCGA-AA--CGGGGCTGCCAATTGTTTTTT---TGTCTCCCTCTTTCTCTCTCTTCTCTTCTCTTCGCTTCTGTATCTTGCTTGGCTTTTTCCAGCCACATTGGCAGCCCCGTTC---GTTTTCTTGCATTTGTGAAATTCGGCCA-ATAA--ACT-AAAGA---G--GAAATATTGT-----------TTTTAAAA--G--------------------G--AAATTTC------GT-CGCTT-TCCCTTCT---TTTGCAGCG--TATTATGTGTGCGAGGATCGACGTTTGG---ATGCGT-AGA-------------GATAAGCGACA---G-
droAna3 scaffold_13117:3144160-3144387 - T-------------------------------------------------------------------------------------------CC----------------------------CT--C--TCT----------CTC----TG--G---TTCT-CGATTT--TTGTAAACAA------------------CAGGGTTGCCAAACCA--------------------------------------------------------------TTTTCCAGCCACACTGGCAACACCATTCCA----TTTTATTATTTGTGAAATTCAGAAG-AAAA--GCT-A----ACAA--CAAG---------------GATCTTGGGAGAGGAAGT--GGACTGGATAGCTA--ATATCTT------GC-CAATTT--------TTATTTGCAGTGCGTGATATG--TTCAAGGATATCCAGCAGCCG--------ATGT------------GATAAACAAAA---AA
droBip1 scf7180000395515:14182-14426 - T-------------------------------------------------------------------------------------------CT----------------------------CT--C--TCT----------CTC----GC--G---TTCT-CGATTT--TTGTAAACAA------------------CAGGGTTGCCAAACAAT--------------------------------------------------------------TTTCCAGCCACACTGGCAACACCATTCCATATTTTTTTGCATTTGTGAAATTCAAGCA-TTAA--AGC-ACAGA---A--AGAAAACAATTAGAGCTAGGATATTGAAAGAA---GTCGAGACCACAAAGCTT--ATATCTT------GC-CATTAT--------CTTTTTGCAGTGCGTGATATG--TTCGAGGAT----ACTACACAGC----CGATGT------------GATAAACAATA-----
dp5 XL_group1a:1468281-1468577 - ATCA----CA-----------CACAAACACAGCTGATAGTGGTTGACGCACTAGAATATGCACACACATGTGCACACACACACGCAGGTCA-------------------------------CTCTTTCTTGCTT--------------GTGTGAGGTGCT-T-AAAA--TTGTAAACAACTCAATATTGTTT-AA--CAGGGCTGCCAAGTCCTGTC--------------------------------------------------AACGATTGATTTTCAAGCATATTGGCAGCCCCGCTC------TGTGCATATTTGTGAAATTCATATAACTGA--T------CA------GAAATTTTCT-----------G-----------------------------------------------T-CTCCT-TTGCTTTC---TTTTCTCTC--TATCTTA--TTTACAATTTCCAACAAGAA-------------------------GAATAATCATTCATGA
droPer2 scaffold_53:330276-330568 + ACAAACAC---AG-------------------CTGATAGTGGTTGACGCACTAGAATATGCACACACATGTGCACACACACACGCAGGTCA-------------------------------CTCTCTCTTGCTT--------------GTGTGAGGTGCT-T-AAAA--TTGTAAACAACTCAATATTGTTT-AA--CAGGGCTGCCAAGTCCTGTC--------------------------------------------------AACGATCGATTTTCAAGCATATTGGCAGCCCCGCTC------TGTGCATATTTGTGAAATTCATATAACTGA--T------CA------GAAATTTTCT-----------G-----------------------------------------------T-CTCCT-TTGCTCTC---TTTTCTCTC--TATCTTA--TTTACAATTTCCA-----ACAAG----A-AGAA------------GAATAATCATTCATGA
droWil2 scf2_1100000004909:8776499-8776714 - TTTGTAAACAACTCTCGCACAAA---------------------------------------------------AAAA--------------------------------------------------------------------------------------------------AC---------AAGAAA-GAAGCAGTGTTGCCATTTAATTTA------------------------------------------------------------ATTCACTTGCACTGGCAAGTCCGTAT-----TAACAAAAATTTGTGAAATTCATAAT-ATAT--GT-----ACATAT--GTAGTTTTTT-----------GTTTAATT--G----------------------------TTTCCCCCAT-TTTTT-TTTTTTGT---TTTGCAGCC--TACAATG--TTTTTTATTCTAT-----GAGAG----A-AAAG------------GGAAAACGAA----AC
droVir3 scaffold_12726:483756-483825 + TGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------TTTTTCATAT-----------------------------------------------------------------------------------------------ATTTT------------------------TTTTTACTGTG--TACTGTG--TTAAAAAATAAAA--------------T-AAAA------------AAGAGGAGAAA---CG
droMoj3 scaffold_2671:437-498 + G----TGTCATAG-GCGCATAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---CTCT-C--AAT--TTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:1953964-1954045 - CTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGGACACAG-AGAATATAATTGCCAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TAATGGG--TACGCTGACCAGCAACAG-CAAG----C-AGGC------------AACAAGCGCAG---CC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TTGCTC--------------TC--G---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAACTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTG--ACATTTT------TC-C-------------ATAATTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--TTCGAGGATCGGGACT.............................................2112.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATCGGGACTAGACAA.......................................2012.00200200000000000000
........................................................................................................................................................................................................................................................................................................................CTTGCATTTGTGAAACTCACC.................................................................................................................................................................................................2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGATCGGGACTAGAC.........................................1911.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---..3111.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGATCGGGACTAG...........................................1811.00110000000000000000
.............................................................................ACACGCACAGCTGATCT----------------------------AT--C--TTG..........................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGATCGGGACTAGACAAG----T-................................2411.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATG--TTCGAGGATCGGGAC..............................................2111.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTCGAGGATCGGGACTAGG..........................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCGGGACTAGACAAG----T-AGGT------------G...............2611.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAAG----T-AGGT------------GGAAAACGAAA---GC2611.00100000000010000000
.....................AA---------------------------------------------------CACACACGCACAGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
droSec2
ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TTGCTC--------------TC--G---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAACTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTA--ACATTTT------TC-C-------------ATAATTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGATCGGGACTAGA..........................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCGGGACTAGACAAG----T-AGGT------------................2511.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAGACAAG----T-AGGT------------GGAAAAC.........2311.0010010
....................................................................................................................................................................................CTCAATATCGCAA-AAACCAGAGC..................................................................................................................................................................................................................................................................................................................................2311.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTCGAGGATCGGG................................................2111.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--TTCGAGGATCGGGACTAGAC.........................................2511.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--TTCGAGGATCGGGACTAGA..........................................2411.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--TTCGAGGATCGGG................................................1811.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--TTCGAGGATCGGGACT.............................................1911.0011000
dm3
ACAGGCGCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------GT--C--TTGCTC--------------TC--G---CACT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTTTTTTTA----------------------------------------------------TTTTCCAGACACACTGGCAGCGCCAT-------TTTCTTGCATTTGTGAAATTTACCCA-CTAA--A------AA---ACA--------------------------------------------------GTG--ACATTTT------TC-C-------------ATACTTGCAGCG--TAATATG--TTTGAGGATCGGGACTAGACAAG----T-AGGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGGGACTAGACAAG----T-................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAAG----T-AGGT------------GGAAAACGAAA---GC2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000000000000000000110000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGGGACTAGACAAG----T-AGGT------------................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--TTTGAGGATCGGGACTAGACAAG----T-................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--TTTGAGGATCGGGACT.............................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCGGGACTAGACAAG----T-AGG.............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGACAAG----T-AGGT------------GGAA............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACTAGACAAG----T-AGGT------------GGAA............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATG--TTTGAGGATCGGGACTAG...........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATG--TTTGAGGATCGGGACT.............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATCGGGACTAGACAAG----T-AGG.............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGATCGGGACTAGACAAG----T-AGGT------------................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--TTTGAGGATCGGGACTAGAC.........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGCAGCG--TAATATG--.............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATG--TTTGAGGATCGG.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAGACAAG----T-AGGT------------GG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATTTT------TC-C-------------ATACTTGCAGCG--TAATATG--.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AATATCGCAA-AAACCAGAGCTG................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG--TTTGAGGATCGGGACTAGACAAG----..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T------TC-C-------------ATACTTGCAGCG--TAATATG--T............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................ACACGCACAGCTGATCT----------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATG--TTTGAGGATCGGT................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCGGGACTAGACAAG----T-AGGT------------GGA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGGACTAGACAAG----T-AGG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAG----T-AGGT------------GGAAAACGAAA---GC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGATCGGGACTAGACAAG----T-AG..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATG--TTTGAGGATCGGGAC..............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCAGCG--TAATATG--TTTGA........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--TAATATG--TTTGAGGATCGG.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGATCGGGACTAGACAAG----T-................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATATCGCAA-AAACCAGAGCT.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATATCGCAA-AAACCAGAG...................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTTGAGGATCG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CCA-CTAA--A------AA---ACA--------------------------------------------------GTG--ACAT..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGATCGGGACTAGACA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGATCGGGACTAGAC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGGACTAGACAAG----T-AGGT------------................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCGGGACTAGACAAG----T-AG..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTTGAGGATCGGGACTA............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATG--TTTGAGGATCGGGACTAGAC.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAG----T-AGGT------------GGAAAACGAAA---GC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAG----T-AGGT------------GGAAAACGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--TAATATG--TTTGAGGATCG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGACAAG----T-AGGT------------GGAA............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATCGGGACTAGACAAG----..................................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TTTGAGGATCGGGACTAG...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--TAATATG--TTTGAGGATCGG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAG----T-AGGT------------GGAAAACGAAA---G.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAG----T-AGGT------------GGAAAACGA.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCAGCG--TAATATG--T............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACTAGACAAG----T-AGGT------------................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TC-C-------------ATACTTGCAGCG--TAA...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATCGGGACTAGACAAG----T-................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAG----T-AGGT------------GGAAAACG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAG----T-AGGT------------GGAAAACGA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGATCGGGACTAGACAAG----..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG----T-AGGT------------GGAAAACGAA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAGACAAG----T-AGGT------------GGAAAACG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCGGGACTAGACAAG----T-AGGT------------GGT.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATG--TTTGAGGATCGGGACT.............................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTTGAGGATCGGGACTAGACAAG----..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--TTTGAGGATCGGGACTAGA..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGTGAAATTTACCCA-CTAA--A------AA---ACA--------------------------------------------------GT.....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGGGACTAGACAAG----T-AGG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCG--TAATATG--TTTGAG.......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
droEre2
AAAGGCGTCACAGCACGCACAAA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------AT--C--TCGCTCG------CTC--TCTT--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AATCCAGAGCTGCCAATTAGTTTTT---TA----------------------------------------------------TTTTCCAGCCACACTGGCAGCGCCGT-------TTTCTTGCATTTGTGAAATTCACCCA-CTAA--A------AA---GCA--------------------------------------------------CTT--AAATTGT------TC-C-------------ATACTTGCAGCG--TAATATG--TTCGAGGATCGGGACTAGACAAA----T-AGGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTCGAGGATCGGGACTAGACA........................................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGATCGGGACTAGACAAA----T-AGGT------------................2611.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTCGAGGATCGGGA...............................................2211.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTCGAGGATCGGGACTA............................................2511.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTCGAGGATCGGGACTAGA..........................................2711.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACTAGACAAA----T-AGGT------------................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAATATG--TTCGAGGATCGGGACT.............................................2411.0010001000
droYak3
AAAGGCGTCACAGCACGCACAAA---------------------------------------------------CACACATGCACAGCTGATCT----------------------------AT--C--TCGCTCT------CTTTTTTTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTAGTTTT----CA----------------------------------------------------TTTTCCAGCCACACTGGCAGCGCCGT-------TTTCTTGCATTTGTGAAATTCACCCA-CTAA--A-------A---TCA--------------------------------------------------TTG--AAATTTT------TC-C-------------ATACTTGCAGCG--TAATATG--TTCAAGGATCGTGACTAGACAAA----T-AGGT------------GGAAAAAGAAA---GCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TTCAAGGATCGTGACTAGACAAA----T-................................2611.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG--TTCAAGGATCGTGAC..............................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAAA----T-AGGT------------GGAAAAAGA.......2211.00100000010000
droEug1
A--GGCGTCACAAAACGCACA-----------------------------------------------------TACACATGCACAGCTGATCT----------------------------CT--C--TTGCTAT------CCC--TTTC--T---CTCT-GGAAAT--TTGTAAACAACTCGATGTCGCAA-AATCCAGAGCTGCCAATTAGTTTT-----------------------------------------------------------TTTCCAGCCATATTGGCAACGCCAT-------TTTCTTGCATTTGTGAAATTCACCTA-CTAAAAA------AA---GTA--------------------------------------------------CAAACAACTTTT------TC-T-------------ATATTTCCAGCA--TAGTATG--TTTGAGGATCGCGACTAGACAAATACAT-AGGT------------GGAAAACGAAA---ACSizeHit CountTotal NormTotal
No Reads
droBia1
GAAGGCGTCACAGCACGCA-------------------------------------------------------CACACAGGCACAGCTGATCT----------------------------CT--A--TCGCTGT------CTC----CT--T---CTCT-GGAAAT--TTGTAAACAACTCAGTGTCGCAA-AATCCAGGGCTGCCAATTAGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCAT-------TTTCGTGCACTTGTGGAATTCACTCT-CTAA--A------AA---GCA--------------------------------------------------A---TATCTTCT------TC-C-------------ACAATTGCAGCG--TATTATG--TTCGAGGATCGGCACTAGGCGAG----A-AGGA------------GCAAAACCATG--TTCSizeHit CountTotal NormTotal
No Reads
droTak1
CA--------GCGCACGCACA-----------------------------------------------------TACACAAGCACAGCTGATCT-----------------------------T--C--TCGCTCGCTCCATCTC--TTTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCAA-AAACCAGAGCTGCCAATTGGTTTTTTTTTT---------------------------------------------TTGTATTTCTTCCAGCCACATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTCACTCT-CTAA--AACAAAAAC---GTA--------------------------------------------------CA--CAACTTTT------TCGA-------------ATACTTTCAGCG--TAATATG--CTCGAGGATCGGGACTAGAAAGA----TAAGGTGGAAAGGGAAAAGGAAAACGAAA---GCSizeHit CountTotal NormTotal
No Reads
droEle1
AAAGGCGTCACAACAAGCACACA---------------------------------------------------CACACACGCACAGCTGATCT----------------------------CT--TTCTTT----------CTC--TGTC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCTCAA-AAAGCAGAGCTGCCAATTAGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTCATCAA-CTAA--A------AA---GTA--------------------------------------------------CA--CAACTTTT------TC-C-------------TTACTTCTAGCG--TAATATG--TTCGAGGATCAGGACTAGACAAA----AAAGGT------------GAAAAATAAAA---ACSizeHit CountTotal NormTotal
No Reads
droRho1
AAAGGCGTCACAACAAGCACA-----------------------------------------------------CACACACGCACAGCTGATCT----------------------------CT--CTCTAT----------CTC----TG--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCTCAA-AAAACAGAGCTGCCAATTGGTTTTT----------------------------------------------------------TTTCCAGCCACATTGGCATCGCCGT-------TCTCTTGCATTTGTGAAATTCACCCA-CTAA--A------AA---GTA--------------------------------------------------CGCACAACTTTT------TT-T-------------TTACTTTCAGCG--TAATATG--TTCGAAGATCGGGACTAGAAAAT----T-AGGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotal
No Reads
droFic1
GGGGAAGTCAT------CAC--A---------------------------------------------------CACACAAGCACAGCTGATCTCTTCCCATCCTTCTTTCTTTAT------CT--CTCTCT----------CTC----TC--T---CTCT-GGAAAT--TTGTAAACAACTCAATATCGCACGAAGCCAGAGCTGCCAATTAGTTTTT---------------------------------------------------------TTCTCCAGCCAGATTGGCATCGCCGT-------TTTCTTGCATTTGTGAAATTTACCAA-CTAA--A-------A---GTA--------------------------------------------------TCCACAACTTTT------CC-C-------------TCAATTTCAGCG--TAATATG--TTCGAGG------ACTAGACATA----T-AAGT------------GGAAAACGAAA---GCSizeHit CountTotal NormTotal
No Reads
droKik1
CAA-------CA----GCACAAA---------------------------------------------------CACA----CACAGCTGATAGCGCACTGT----------TTAGCCCTCTCTGTC--TCTC----------------TTTCGATCTGCTCAGAAATTTTTGTAAACAACTCAATATCGCGA-AA--CGGGGCTGCCAATTGTTTTTT---TGTCTCCCTCTTTCTCTCTCTTCTCTTCTCTTCGCTTCTGTATCTTGCTTGGCTTTTTCCAGCCACATTGGCAGCCCCGTTC---GTTTTCTTGCATTTGTGAAATTCGGCCA-ATAA--ACT-AAAGA---G--GAAATATTGT-----------TTTTAAAA--G--------------------G--AAATTTC------GT-CGCTT-TCCCTTCT---TTTGCAGCG--TATTATGTGTGCGAGGATCGACGTTTGG---ATGCGT-AGA-------------GATAAGCGACA---G-SizeHit CountTotal NormTotal
No Reads
droAna3
T-------------------------------------------------------------------------------------------CC----------------------------CT--C--TCT----------CTC----TG--G---TTCT-CGATTT--TTGTAAACAA------------------CAGGGTTGCCAAACCA--------------------------------------------------------------TTTTCCAGCCACACTGGCAACACCATTCCA----TTTTATTATTTGTGAAATTCAGAAG-AAAA--GCT-A----ACAA--CAAG---------------GATCTTGGGAGAGGAAGT--GGACTGGATAGCTA--ATATCTT------GC-CAATTT--------TTATTTGCAGTGCGTGATATG--TTCAAGGATATCCAGCAGCCG--------ATGT------------GATAAACAAAA---AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGGATATCCAGCAGCCG--------ATG.............................2411.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT--------TTATTTGCAGTGCGTGAT..................................................................2211.001000010
droBip1
T-------------------------------------------------------------------------------------------CT----------------------------CT--C--TCT----------CTC----GC--G---TTCT-CGATTT--TTGTAAACAA------------------CAGGGTTGCCAAACAAT--------------------------------------------------------------TTTCCAGCCACACTGGCAACACCATTCCATATTTTTTTGCATTTGTGAAATTCAAGCA-TTAA--AGC-ACAGA---A--AGAAAACAATTAGAGCTAGGATATTGAAAGAA---GTCGAGACCACAAAGCTT--ATATCTT------GC-CATTAT--------CTTTTTGCAGTGCGTGATATG--TTCGAGGAT----ACTACACAGC----CGATGT------------GATAAACAATA-----SizeHit CountTotal NormTotal
No Reads
dp5
ATCA----CA-----------CACAAACACAGCTGATAGTGGTTGACGCACTAGAATATGCACACACATGTGCACACACACACGCAGGTCA-------------------------------CTCTTTCTTGCTT--------------GTGTGAGGTGCT-T-AAAA--TTGTAAACAACTCAATATTGTTT-AA--CAGGGCTGCCAAGTCCTGTC--------------------------------------------------AACGATTGATTTTCAAGCATATTGGCAGCCCCGCTC------TGTGCATATTTGTGAAATTCATATAACTGA--T------CA------GAAATTTTCT-----------G-----------------------------------------------T-CTCCT-TTGCTTTC---TTTTCTCTC--TATCTTA--TTTACAATTTCCAACAAGAA-------------------------GAATAATCATTCATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................AATTTTCT-----------G-----------------------------------------------T-CTCCT-TTGCT.......................................................................................2011.0010100000000
droPer2
ACAAACAC---AG-------------------CTGATAGTGGTTGACGCACTAGAATATGCACACACATGTGCACACACACACGCAGGTCA-------------------------------CTCTCTCTTGCTT--------------GTGTGAGGTGCT-T-AAAA--TTGTAAACAACTCAATATTGTTT-AA--CAGGGCTGCCAAGTCCTGTC--------------------------------------------------AACGATCGATTTTCAAGCATATTGGCAGCCCCGCTC------TGTGCATATTTGTGAAATTCATATAACTGA--T------CA------GAAATTTTCT-----------G-----------------------------------------------T-CTCCT-TTGCTCTC---TTTTCTCTC--TATCTTA--TTTACAATTTCCA-----ACAAG----A-AGAA------------GAATAATCATTCATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTTGTAAACAACTCTCGCACAAA---------------------------------------------------AAAA--------------------------------------------------------------------------------------------------AC---------AAGAAA-GAAGCAGTGTTGCCATTTAATTTA------------------------------------------------------------ATTCACTTGCACTGGCAAGTCCGTAT-----TAACAAAAATTTGTGAAATTCATAAT-ATAT--GT-----ACATAT--GTAGTTTTTT-----------GTTTAATT--G----------------------------TTTCCCCCAT-TTTTT-TTTTTTGT---TTTGCAGCC--TACAATG--TTTTTTATTCTAT-----GAGAG----A-AAAG------------GGAAAACGAA----ACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTAT-----GAGAG----A-AAAG------------GGAA............2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTCTAT-----GAGAG----A-AAAG------------GGAAAAC.........2611.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTTTTTATTCTAT-----GAGAG----A-AAA.............................2311.00100010
droVir3
TGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------TTTTTCATAT-----------------------------------------------------------------------------------------------ATTTT------------------------TTTTTACTGTG--TACTGTG--TTAAAAAATAAAA--------------T-AAAA------------AAGAGGAGAAA---CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
G----TGTCATAG-GCGCATAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---CTCT-C--AAT--TTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................CACACACATACGCTTGACCG------------------------ATCGCTC.................................................................................................................................................................................................................................................................................................................................................................................................................27202.905840100170
..........................................................................CACACACATACGCTTGACCG------------------------ATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................25202.054118100193
..........................................................................CACACACATACGCTTGACCG------------------------ATCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................26200.80160100123
...................TAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................25200.408700010
...........................................................................ACACACATACGCTTGACCG------------------------ATCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................25200.204400000
..........................................................................CACACACATACGCTTGACCG------------------------ATC.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.153300000
...........................................................................ACACACATACGCTTGACCG------------------------ATCG....................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
...................TAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
..................ATAAT---------------------------------------------------CACACACATACGCTTGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000020
...................TAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................29200.102200000
..........................................................................CACACACATACGCTTGACCG------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
...........................................................................ACACACATACGCTTGACCG------------------------ATCGCTC.................................................................................................................................................................................................................................................................................................................................................................................................................26200.102200000
.....................................................................................GCTTGACCG------------------------ATCGCTCTC----------------------TC--T---CTCT-............................................................................................................................................................................................................................................................................................................................................................................25200.051000010
..........................................................................CACACACATACGCTTGACCG------------------------ATCGCTCC................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000001
.............................................................................ACACATACGCTTGACCG------------------------ATCGCTCT................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
...........................................................................ACACACATACGCTTGACCG------------------------AT......................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...................TAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCG....................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000001
......................T---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGCTC.................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
......................T---------------------------------------------------CACACACATACGCTTGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..................................................................................TACGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---.................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...................TAAT---------------------------------------------------CACACACATACGCTTGACCG------------------------AT......................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
...........................................................................ACACACATACGCTTGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
......................T---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..........................................................................CACACACATACGCTTGACCG------------------------ATCGCTCT................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
...........................................................................ACACACATACGCTTGACCG------------------------ATCGCTCC................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
..................................................................................TACGCTTGACCG------------------------ATCGCTCTC----------------------TC--.....................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
..........................................................................CACACACATACGCTTGACCT------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..................................................................................TACGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---CT...............................................................................................................................................................................................................................................................................................................................................................................26200.051100000
...............................................................................ACATACGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---C................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
......................T---------------------------------------------------CACACACATACGCTTGACCG------------------------ATCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.............................................................................ACACATACGCTTGACCG------------------------ATCGCTCTC----------------------.........................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..........................................................................CACACACATACGCTTGACCG------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
....................................................................................CGCTTGACCG------------------------ATCGCTCTC----------------------TC--T---.................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
droGri2
CTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAAGGACACAG-AGAATATAATTGCCAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TAATGGG--TACGCTGACCAGCAACAG-CAAG----C-AGGC------------AACAAGCGCAG---CCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:44 AM