ID:

dsi_7999

 Coordinate:

x:18479936-18480121 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-51.1 -51.1 -50.8

Flybase annnotation

five_prime_UTR [x_18480122_18480184_-]; exon [x_18480122_18480184_-]; five_prime_UTR [x_18479635_18479935_-]; exon [x_18478978_18479935_-]; intron [x_18479936_18480121_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCACATCGGGAATTGGTCGTACAATTGCGATTTGCGGTGCAAACAATTGAGTAAGTTGCCTATTCTCGTACTTCGTCGATGTGGAGACCCTTTTGGCGACCCTCAATCAGCTTCCACGCCAAAAAAGCTGGGTGAGCGGGTGTGTAGTGGGCGCCAGGATGCCGTGGCCACGCAGTTCTCAAATCGCAGTCCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCCGCTCACAGCCTTCAGCCCAAATTGCCATTGCCATTGCCCGGAGCAGCGAATTGGCTGC
**************************************************....((((((...((((.(((.((...)).))))))).......))))))......(((((((...........)))))))((((((((((((((...((((((...((.((.(((....))).))..)).....)).)))).)))))...((((((.....)))))).......)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 M024
male body		 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
................................................................................................................................................TATTGGGCGCCAGGGTG............................................................................................................................. 17 2 9 2.11 19 19 0 0 0 0 0 0 0 0
..................GTACAATTGCGATTTGCGGTGC...................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................................................CCAAAAAAACTGGGTGAGCGGATGTGTA............................................................................................................................................ 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................AAAAAGCTGGGTGAGTGGGCG................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................ATTGCCATTGCCCGGAGCAG............ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..................................................................CGTACTTCGACGATGT............................................................................................................................................................................................................ 16 1 1 1.00 1 0 0 0 1 0 0 0 0 0
........................TTGCGATTTGCGGTGCAAACAATTT............................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................CGTCGATGTGGAGACCCT................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................CTTCGTCGATGTGGAGACCCT................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................GTGAGCGGATGTGTAGTGGGCGCCAG................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................ATTTGCGGTGCAAACAAT............................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................GTATTGGGCGCCAGGGTG............................................................................................................................. 18 2 4 0.75 3 3 0 0 0 0 0 0 0 0
................................................................................................................................................TATTGGGCGCCAGGGT.............................................................................................................................. 16 2 20 0.45 9 9 0 0 0 0 0 0 0 0
............................................................................................................................................TGCGTATTGGGCGCCAGGGT.............................................................................................................................. 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................GTATTGGGCGCCAGGGT.............................................................................................................................. 17 2 8 0.25 2 2 0 0 0 0 0 0 0 0
..............................................................................................................CTTCCACGCCAAAGAA................................................................................................................................................................ 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................GGGGATGTAGGGGGCGCCA.................................................................................................................................. 19 3 13 0.15 2 0 1 0 0 1 0 0 0 0
................................................................................................................................................TATTGGGCGCCAGGGTGT............................................................................................................................ 18 3 20 0.15 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGTATTGGGCGCCAGG................................................................................................................................ 17 2 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................................................................CCTTTTGGCGTCGCTCAACC.................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................TTGCGTATTGGGCGCCAGG................................................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................TCTGGGTGAGCGGGT................................................................................................................................................. 15 1 16 0.06 1 0 0 0 0 0 0 0 1 0
...........................CGACTTGAGGTGCAAAC.................................................................................................................................................................................................................................................. 17 2 18 0.06 1 0 0 0 0 0 0 0 0 1
...............................................................................................................TTCCACGCCAAAGAAACT............................................................................................................................................................. 18 2 18 0.06 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................GGGGATGTATTGGGCGCCA.................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................TGCCAATGGCATTGCCCGGT................ 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................ATTGGGCGCCAGGAGGC............................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................AGTTGGGAGAGCGGGTG................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGTGTAGCCCTTAACCAGCATGTTAACGCTAAACGCCACGTTTGTTAACTCATTCAACGGATAAGAGCATGAAGCAGCTACACCTCTGGGAAAACCGCTGGGAGTTAGTCGAAGGTGCGGTTTTTTCGACCCACTCGCCCACACATCACCCGCGGTCCTACGGCACCGGTGCGTCAAGAGTTTAGCGTCAGGGCGTATTTGCTTCTCGGAATGAGAAAGAAAGAAAGGCGAGTGTCGGAAGTCGGGTTTAACGGTAACGGTAACGGGCCTCGTCGCTTAACCGACG
**************************************************....((((((...((((.(((.((...)).))))))).......))))))......(((((((...........)))))))((((((((((((((...((((((...((.((.(((....))).))..)).....)).)))).)))))...((((((.....)))))).......)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR618934
dsim w501 ovaries
..............................................................................................................GAAGGTGCGGTTTCTTTGAA............................................................................................................................................................ 20 3 15 8.47 127 112 11 4 0 0
.............................................................................................................AGAAGGTGCGGTTTCTTTGA............................................................................................................................................................. 20 3 15 6.20 93 81 5 7 0 0
..............................................................................................................GAAGGTGCGGTTTCTTTGA............................................................................................................................................................. 19 2 4 3.00 12 11 1 0 0 0
.......................................................................................................................................CGCCCACACATCACCCGCGG................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0
..............................................................................................................GAAGGTGCGGTTTTTTTGA............................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0
..............................................................................................................GAAGGTGCGGTTTCTT................................................................................................................................................................ 16 1 4 0.75 3 3 0 0 0 0
.............................................................................................................AGAAGGTGCGGTTTTTTTGAA............................................................................................................................................................ 21 3 4 0.50 2 1 1 0 0 0
.............................................................................................................CGAAGGTGCGGTTTCTTTGA............................................................................................................................................................. 20 2 2 0.50 1 0 0 1 0 0
..............................................................................................................GAAGGTGCGGTTTCTTCGAAG........................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
..............................................................................................................GAAGGTGCGGTTTCTTTGAAC........................................................................................................................................................... 21 3 6 0.33 2 2 0 0 0 0
............................................................................................................CAGAAGGTGCGGTTTTTTTGA............................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0
..................................................................................................TGAGAGTTAGTCGAGGGT.......................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1
................................................................................................................................................ATAACCCGCGGTCCCAC............................................................................................................................. 17 2 9 0.11 1 0 0 0 0 1
...............................................................................................................AAGGTGCGGTTTCTTTGA............................................................................................................................................................. 18 2 18 0.11 2 1 0 1 0 0
......................................................................................................................................................................................................................CAAAGAAAGAAAGCCCAGTG.................................................... 20 3 12 0.08 1 0 0 0 0 1
...............................................................................................................AAGGTGCGGTTTCTT................................................................................................................................................................ 15 1 19 0.05 1 1 0 0 0 0
.............................................................................................................AGAAGGTGCGGTTTCTT................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0
................................................................................................................................................ATAACCCGCGGTCCCA.............................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1
............................................................................................................................................................................................................................AAAATAGGCGAGTGTCG................................................. 17 2 20 0.05 1 0 0 0 0 1
..............................................................................................................GAAGGTGCGGTTTCTTT............................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................................AAAGAAAGCCCAGTGTC.................................................. 17 2 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:18479886-18480171 - dsi_7999 GCACATCGGGAATTGGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-AATTGAGTAAGTTGCCTAT------TCTCGTA-C-TT-CGTCGATGTG--GAGACCC-----TTTTGG--C--GACC-CT-CAATCA----GCT-TCCACGC--------------CAAAAAAGCTGGGTGAGCGGGTGTG--------------------------------TAGTGGGCG-CCAGGATGCCGTGGC--CA--CGCAGTTCTCAAATCGCAGTCCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCTTCAGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCAGC-GAA-TT--GGCTGC
droSec2 scaffold_8:1865782-1866067 - GCACATCGGGAATTGGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-AATCGAGTAAGTTGCCTAT------TCTCGTA-C-TT-CGTCGATGTG--GAGACCC-----TTCTGG--C--GACT-CT-CAATCA----GCT-TCCACGC--------------CAAAAAAGCTGGGTGAGCGGGTGTG--------------------------------TAGTGGGCT-CCAGAATGCCGTGGC--CA--CGCAGTTCTCAAATCGCAGTCCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCTTCCGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCAGC-GAA-TT--GGCTGC
dm3 chrX:19587233-19587518 - GCATATCGGGAATTTGTCGTACAA-------TTGCGATTCG----------------------------CGGTGCAAAC-AATCGAGTAAGTTGCCTAT------TCTCGTA-C-TT-GGTCGATGTG--GAGACCC-----TTCTGC--C--GACC-CT-CAATCA----GCT-TCCACGC--------------CAAAGGAGCTGGGTGAGCGGTTGAA--------------------------------TAGTGGGCG-CCAGGATGCCGTGGC--CA--CGCAGTTCTTAAATCGCAGCGCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCATCAGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCACC-GAA-TT--GGCTGC
droEre2 scaffold_4690:9813306-9813588 - GCATATCGGGAAATTGTCGTACAA-------TTGGGATTTG----------------------------CGGTGCAAGC-CATCGAGTAAGTTGCTTTA------TATCGCA-A-TC-CGTCGATGTG--GAGCCCC-----TTTTGC--C--GACCTCG-CAATCA----GTTTTCAACCC--------------CAAAGGTGCTGGGTGGACCTACGTA--------------------------------AAGTGGGCG-CCAGGATGCCATTGA--CA--CGCAGTTCGTAAGTCGCGCCCCCGCATAAACGAAGCGCCTTACACTTTCTTTCTTTCC----GCTCGCAGCCTTCAGCCCAAAA-------------TTGCC-ATTG-CCCG---GAGCACC-GAA-TT--GGCTGC
droYak3 X:11753788-11754069 + GCATATCGGGAAATTGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-CATCGAGTAAGTTGCCTAT------AATCGCA-A-TC-CATCGATGAG--TAATCCC-----TTCTGC--C--GAACTCC-CAATCA----GTT-TTCACCA--------------CAAAGGAGCTGAGTGGAACTGCGTA--------------------------------AAGTGCGCG-CCAGGATGCCGTTGC--CA--CACAGTTCACAAATCGCGACCCCGCATAAACGAAGCGCCTTACTCTTTCTTTCTTTCC----GCTCGTAGCCTTCAGCCCAAAA-------------TTGCC-ATTG-CCCG---GAGCATC-GAA-TT--GGCTGC
droEug1 scf7180000409230:750481-750755 + ACACATTGCGAACTTGTTATGCGT-------TTGCAAATT-----------------------------CAATGTAAGC-AACTGAATGAGTAACCTTC------ACTTTTT-A-AC-CCCAGAGGTG--AAACCTG-----TTGTGT--T--CCGT-CT-TGGTTA----GTTGTCCATAA--------------GAAAGAAGCTAAG--ATCTGGTGTA--------------------------------CAAAATTCA-TCAGAATCCTAACGG--CC--CACAATTCTTGTTTCGAGCACCCGCATGAGCGAAGTGACTTACTCTTTCTTTCTCTCGC--------AAGCCTGCAGCCCAGAA-------------TTGTC-ATTG-TCCG---GAGCACA-GAT-TT--GGCTGC
droBia1 scf7180000302069:1019983-1020260 + CAACTTCGCGATCTTTGCCAACAA-------TTACGAACT--------------------TTGCGAACTCGGAGCAAGC-AATTGAGTAAGTGACCTTCG-----TCTCGCA-A-CC-CGCAGAAGGA--AAACAAC-----TGCCAC--C--CGCCGCC-TGGTGA----GCTGCCCAGCC--------------GAAGGGAGGATAGGGGGCAGGTGCT--------------------------------GAGTGGGCC-CCGCCATCCCGGCCC--CC--CACAGTTCACGATTCGCGCGCCCGCATCACCGAATCTACTCACTCTTTCTTTATT------------------TCAGCCCAGAA-------------TCGCC-TTTT-CCCG---GATCACT-GAA-TT--GGCTGC
droTak1 scf7180000415101:112399-112666 - GCACTTCGCGAACA---------ACGACGAAT------TTTCGG--AGCAACCACGAACTTTGCGAACTCGCAGCCAGG-AATCGA------------------------CC-C-CC-CGCCGAAGAA--AACCCCCG----TCCCGC--C--GACCTTTCCCGTTA----GTTGGCCACCC--------------GCAAGGACCTTCA--AT-CGGT---------------------------------------AG----GTAGACTCCCATCCC--CG--CACAATTCTCGTTACGCGCCGCCGCATGAACGAGGCGACTCACTCTTTCTTTCTTTC------------------AGCCCAGAAGTGCCCAGAATTATTGCC-ATT-----G---GAGCAGC-GATTTT--GGCTGC
droEle1 scf7180000491277:28536-28806 - GCACATAGCAAACTTCGCGAACAA-------TTTTTAAT-G----------------------------CAGTGCAAGC-TACTGAGCGATTTGGCCCCC-----TGCCGAG-C-AC-CATAGATGTA--AAACGCC-----TTTTGC--C--AATA-CG-TGGTAA----GTTGTCCCACT--------------GCCAGGAGACGAA--GTCCAGTG---------------------------------------------CAGAGCACTGCCGCCATC--CGCAGTTCTCGAAACGCACACCCGCATGAGCGAAGTGACTTACTCTTTCTTTCTCTCA----CGGCGCAGCCTTCAGCCCAGAA------------ATTGCC-ATTG-CCCG---GAGCATC-AAA-TT--GCCTGC
droRho1 scf7180000777033:119991-120258 - ACACATCGCAAACTTTGCGAAGAA-------TTGTGAAT-A----------------------------CAGTGCAAAC-AATTGACCGACTTGGACTC------CGTCGAA-C-TC-GGTAAATGTG--AAACGCT-----ATTTAC--C--AACCTGT-CGGCTA----GTTGCTCGACC--------------TCAAGGAGACGAA--AGTTGGTT--------------------------------------AA----GCACACTGCC---CCCACA--CGCAGTTCTCGAATCGCGCATCCGCATGATCGAAGTGACTTACTCTTTCTTGCTCTCG-------CGCAGCCTTCAGCCCAGAA------------ATTGTC-ATTG-CCCG---GAGCAAT-AAC-TT--GCCAGG
droFic1 scf7180000454073:1870958-1871231 - GCACATCGCAAATTCACCGAACAA-------TTGTAATT-----------------------------------------AATTAAGGGTTTTGCATT-------GGCTGCC-C-TC-CGTAGGCGTT-----CCTCATTTCTATTGC--T--GACTTAT-CGGTAA----GTGTTCCAACC--------------GAAAGGACATGGT-TA-ACGGAGCA--------------------------------CAGTGGGCT-CTAGGATACCATCGG--CA--ATCAGTTCACGAGTCGCGCACCCGCATGAGCGAAGTGAATTACTCTTTCTTTCTCTCGC--AGCCTTCAGC-TTCTGCCCAGAAT-------------TCCCAATTG-CCCG---GAGCACA-GAA-TTTGGGCTGC
droKik1 scf7180000302685:178889-179158 - GCTCTTCGCAAACTCACAAC--AT-------CT--------CTTTTAAGAAGAG---------------C-TTGAATTAA---------------TGTCAGTTGG------CATTGCTA--AAAAAAATATAA-----------------------------------------------------------------------GTCCT-TA-ACTGGATATAATCTCAACTAGCCTTGGCCCACCACCCTCGCTCTGCCCCCCGAGTACCCCGACCC--AG--CACAGTACGTCATGCGCGC-GACGCATAAACGTTGTCACTGATTCTTTCTTTCTCTCGC---AGCCGCAGCCTTCAGCCCGAAATCGCC-------ATTGCC-ACTGCCCCG---AGGCAACCCAA-TT--GGCTGC
droAna3 scaffold_13417:1239687-1239977 - GCACTTCGGAAAGTCATTGAA----------T------TCCCAAATAGCAATTA---------------C-GTGCGAATA---------------TGTCAGTTGG------C-TTACTC--AAGGGTG--TAAACTG------TTTACCAGCGCATTGT--TTGTTGATT-GTCACCCAACTGGACCAGTTACGGTCATAACAATTGGATATTTGC-------------------------------------------GAG-TTAGGGGACCAAGGG--CGATCATAATCGCGATTTCGTACGGCTGCATGAGCGAGGTCACTTGCTCTTTCTTTCTCTGGCACAGCCTTCAGCGTTCAGCTGAGAATCGGC-------A-GACA-ATTG-ACCG---AGGAAAC-CAA-TT--GGCTGC
droBip1 scf7180000395921:20217-20509 + GCACTTCGCAAAGTCATTGAA----------T------TCCCAAACAATTATTA---------------C-GTGCAAATA---------------TGTCAGTTTC------T-GCATTC--AAGGGTG--TAAACTG------TTTACCATCGCATTGT--TTGGTGATTGGTTAGCCAACTGGACCAGTTACGGCCTAAATAAATAAATATCTGGCAG------------------------------------------T-CGGGGAGACCAAGGG--CGATTATCATCGCGATTTTGTACGCCTGTATGAGCGAGGTCACTTGCTCTTTCTTTCTCTGGCACAGCCTTCAGCGTTCAGCTGAGAATCGGC-------A-GACA-ATTG-ACCG---AGGAAAC-CAA-TT--GGCTGC
dp5 XL_group1e:946373-946433 - TCTTTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----GTAGCCGCCTTCAGCAGA-------------------CA-ATTG-CCAAAAGCAGCAACCCAT-TT--AACTGC
droPer2 scaffold_30:251662-251722 + TCTTTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----GTAGCCGCCTTCAGCAGA-------------------CA-ATTG-CCAAAAGCAGCAACCCAT-TT--CACTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCACATCGGGAATTGGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-AATTGAGTAAGTTGCCTAT------TCTCGTA-C-TT-CGTCGATGTG--GAGACCC-----TTTTGG--C--GACC-CT-CAATCA----GCT-TCCACGC--------------CAAAAAAGCTGGGTGAGCGGGTGTG--------------------------------TAGTGGGCG-CCAGGATGCCGTGGC--CA--CGCAGTTCTCAAATCGCAGTCCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCTTCAGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCAGC-GAA-TT--GGCTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................GTACAA-------TTGCGATTTG----------------------------CGGTGC..........................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCC-ATTG-CCCG---GAGCAG................2011.00101000000000000000
...............................TTGCGATTTG----------------------------CGGTGCAAAC-AATTT................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
......................................................................................................................CGTCGATGTG--GAGACCC-----T......................................................................................................................................................................................................................................................................................1811.00110000000000000000
.................................................................................................................C-TT-CGTCGATGTG--GAGACCC-----T......................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................ATTTG----------------------------CGGTGCAAAC-AAT..................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
droSec2
GCACATCGGGAATTGGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-AATCGAGTAAGTTGCCTAT------TCTCGTA-C-TT-CGTCGATGTG--GAGACCC-----TTCTGG--C--GACT-CT-CAATCA----GCT-TCCACGC--------------CAAAAAAGCTGGGTGAGCGGGTGTG--------------------------------TAGTGGGCT-CCAGAATGCCGTGGC--CA--CGCAGTTCTCAAATCGCAGTCCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCTTCCGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCAGC-GAA-TT--GGCTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................TTGCGATTTG----------------------------CGGTGCAAAC-A....................................................................................................................................................................................................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCC-ATTG-CCCG---GAGCAGC-GAA-TT--G.....2711.0010100
dm3
GCATATCGGGAATTTGTCGTACAA-------TTGCGATTCG----------------------------CGGTGCAAAC-AATCGAGTAAGTTGCCTAT------TCTCGTA-C-TT-GGTCGATGTG--GAGACCC-----TTCTGC--C--GACC-CT-CAATCA----GCT-TCCACGC--------------CAAAGGAGCTGGGTGAGCGGTTGAA--------------------------------TAGTGGGCG-CCAGGATGCCGTGGC--CA--CGCAGTTCTTAAATCGCAGCGCCGCATAAACGAAGAGCCTTACTCTTTCTTTCTTTCC----GCTCACAGCCATCAGCCCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GAGCACC-GAA-TT--GGCTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................ATTCG----------------------------CGGTGCAAAC-AATCGAGT.............................................................................................................................................................................................................................................................................................................................................23126.00260000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100011001000000000000000000000000000000000000000001030102010010000002000000100000000012100000000000200100000000
......................AA-------TTGCGATTCG----------------------------CGGTGCAAAC-.....................................................................................................................................................................................................................................................................................................................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000040000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTTCTTTCTTTCC----GCTCACAGT..................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000200000000000000000001000
....................................ATTCG----------------------------CGGTGCAAAC-AATCGAG..............................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000001000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................A-TTGCC-------ATTGCC-ATTG-CCCG---GAG...................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTCTTTCTTTCC----GCTCACAGT..................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTG-CCCG---GAGCACC-GAA-TT--G.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CCCG---GAGCACC-GAA-TT--GG....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTGCGATTCG----------------------------CGGTGCAAAC-AAT..................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AGCCCAAA-TTGCC-------ATTGCC-AT................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GGTGCAAAC-AATCGAGTAAGT.........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GCCCAAA-TTGCC-------ATTGCC-AT................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GTGAGCGGTTGAA--------------------------------TAGTGGGCG-CC............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTG-CCCG---GAGCACC-GAA-TT--GGCT..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTG-CCCG---GAGCACC-GAA-TT--G.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCC-ATTG-CCCG---GAGCA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GTGAGCGGTTGAA--------------------------------TAGTGGGC................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................ACGC--------------CAAAGGAGCTGGGC...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CATAAACGAAGAGCCTTACTC............................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GCC-------ATTGCC-ATTG-CCCG---GAGC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................TTTCTTTCTTTCC----GCTCACAGC..................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................TGTG--GAGACCC-----TTCTGC--C--GACC-CT-C...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................GCATAAACGAAGAGCCTTACT.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................ATTCG----------------------------CGGTGCAAAC-AATCGAGC.............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................A-C-TT-GGTCGATGTG--GAGA...............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCC-ATTG-CCCG---GAGCACC-GAA-T.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................AGTAAGTTGCCTAT------TCTC........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTGTCGTACAA-------TTGCGATTCG----------------------------CGGT............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................CTGGGTGAGCGGTTGAA--------------------------------TAG.....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGCC-ATTG-CCCG---GAGCACC-GAA-TT--G.....2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GTGCAAAC-AATCGAGTAAGTTG.......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................GC--------------CAAAGGAGCTGGGTGAG................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTG-CCCG---GAGCACC-GAA-TT--GGCTG.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CCAAA-TTGCC-------ATTGCC-ATTG-CCCG---GA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AA-------TTGCGATTCG----------------------------CGGTGCA.........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTG-CCCG---GAGCACC-GAA-T.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CCC-----TTCTGC--C--GACC-CT-CAATCA----GCT-TC....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTTCTTTCTTTCC----GCTCACA....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CAGGATGCCGTGGC--CA--GC.......................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000001031000000000
...............................................................................................................................................................................................................................................................................CCGTGGC--CA--CGCAGTTCTTAA.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................G----------------------------CGGTGCAAAC-AATCGAG..............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATTTGTCGTACAA-------TTGCGA................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................ATTCG----------------------------CGGTGCAAAC-AATCGA...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGCC-ATTG-CCCG---GAGCACC-GAA-..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CTTTCTTTCC----GCTCACAGT..................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GCCGCATAAACGAAGAGC...................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCC-ATTG-CCCG---GAGCACC-GAA-TT--......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................C-------ATTGCC-ATTG-CCCG---GAGCACC-GAA-..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GC--------------CAAAGGAGCTGGGTGA.................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................GCTGGGTGAGCGGTTGAA--------------------------------TAGTGGGC................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................CC-------ATTGCC-ATTG-CCCG---GAGCA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................A--------------------------------TAGTGGGCG-CCAGGATGC.....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................AATCA----GCT-TCCACGC--------------CAAAGGA..........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AATCGAGTAAGTTGCCTA...................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CGGTGCAAAC-AATCGAGTAAGT.........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................GATTCG----------------------------CGGTGCAAAC-AATCGAG..............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................AGGAGCTGGGTGAGCGGT............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................CAGGATGCCGTGGC--CA--CGCAG....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCC-ATTG-CCCG---GAGCACC-GAA-..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACTCTTTCTTTCTTTCC----GCTCACAGC..................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AAC-AATCGAGTAAGTTGC......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
....................................ATTCG----------------------------CGGTGCAAAC-AATCG................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................TTGCC-------ATTGCC-ATTG-CCCG---GAGCACC-..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCGTA-C-TT-GGTCGATGTG--G..................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................GTGCAAAC-AATCGAGTAAGT.........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................GCCTAT------TCTCGTA-C-TT-GGTCGATG.......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................G---GAGCACC-GAA-TT--GGCTGC1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CATCAGCCCAAA-TTGCC-------ATTGCC-..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................CACGC--------------CAAAGGAGCTGGG....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................ATCGAGTAAGTTGCCTAT------TCTC........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CAAA-TTGCC-------ATTGCC-ATTG-CCCG---......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................AA-------TTGCGATTCG----------------------------CGGTGCAA........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTGCC-ATTG-CCCG---GAGCACC-TGT-..........2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCATATCGGGAAATTGTCGTACAA-------TTGGGATTTG----------------------------CGGTGCAAGC-CATCGAGTAAGTTGCTTTA------TATCGCA-A-TC-CGTCGATGTG--GAGCCCC-----TTTTGC--C--GACCTCG-CAATCA----GTTTTCAACCC--------------CAAAGGTGCTGGGTGGACCTACGTA--------------------------------AAGTGGGCG-CCAGGATGCCATTGA--CA--CGCAGTTCGTAAGTCGCGCCCCCGCATAAACGAAGCGCCTTACACTTTCTTTCTTTCC----GCTCGCAGCCTTCAGCCCAAAA-------------TTGCC-ATTG-CCCG---GAGCACC-GAA-TT--GGCTGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................ATTG-CCCG---GAGCACC-GAA-T.........1911.0010000010
droYak3
GCATATCGGGAAATTGTCGTACAA-------TTGCGATTTG----------------------------CGGTGCAAAC-CATCGAGTAAGTTGCCTAT------AATCGCA-A-TC-CATCGATGAG--TAATCCC-----TTCTGC--C--GAACTCC-CAATCA----GTT-TTCACCA--------------CAAAGGAGCTGAGTGGAACTGCGTA--------------------------------AAGTGCGCG-CCAGGATGCCGTTGC--CA--CACAGTTCACAAATCGCGACCCCGCATAAACGAAGCGCCTTACTCTTTCTTTCTTTCC----GCTCGTAGCCTTCAGCCCAAAA-------------TTGCC-ATTG-CCCG---GAGCATC-GAA-TT--GGCTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ACACATTGCGAACTTGTTATGCGT-------TTGCAAATT-----------------------------CAATGTAAGC-AACTGAATGAGTAACCTTC------ACTTTTT-A-AC-CCCAGAGGTG--AAACCTG-----TTGTGT--T--CCGT-CT-TGGTTA----GTTGTCCATAA--------------GAAAGAAGCTAAG--ATCTGGTGTA--------------------------------CAAAATTCA-TCAGAATCCTAACGG--CC--CACAATTCTTGTTTCGAGCACCCGCATGAGCGAAGTGACTTACTCTTTCTTTCTCTCGC--------AAGCCTGCAGCCCAGAA-------------TTGTC-ATTG-TCCG---GAGCACA-GAT-TT--GGCTGCSizeHit CountTotal NormTotal
No Reads
droBia1
CAACTTCGCGATCTTTGCCAACAA-------TTACGAACT--------------------TTGCGAACTCGGAGCAAGC-AATTGAGTAAGTGACCTTCG-----TCTCGCA-A-CC-CGCAGAAGGA--AAACAAC-----TGCCAC--C--CGCCGCC-TGGTGA----GCTGCCCAGCC--------------GAAGGGAGGATAGGGGGCAGGTGCT--------------------------------GAGTGGGCC-CCGCCATCCCGGCCC--CC--CACAGTTCACGATTCGCGCGCCCGCATCACCGAATCTACTCACTCTTTCTTTATT------------------TCAGCCCAGAA-------------TCGCC-TTTT-CCCG---GATCACT-GAA-TT--GGCTGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCACTTCGCGAACA---------ACGACGAAT------TTTCGG--AGCAACCACGAACTTTGCGAACTCGCAGCCAGG-AATCGA------------------------CC-C-CC-CGCCGAAGAA--AACCCCCG----TCCCGC--C--GACCTTTCCCGTTA----GTTGGCCACCC--------------GCAAGGACCTTCA--AT-CGGT---------------------------------------AG----GTAGACTCCCATCCC--CG--CACAATTCTCGTTACGCGCCGCCGCATGAACGAGGCGACTCACTCTTTCTTTCTTTC------------------AGCCCAGAAGTGCCCAGAATTATTGCC-ATT-----G---GAGCAGC-GATTTT--GGCTGCSizeHit CountTotal NormTotal
No Reads
droEle1
GCACATAGCAAACTTCGCGAACAA-------TTTTTAAT-G----------------------------CAGTGCAAGC-TACTGAGCGATTTGGCCCCC-----TGCCGAG-C-AC-CATAGATGTA--AAACGCC-----TTTTGC--C--AATA-CG-TGGTAA----GTTGTCCCACT--------------GCCAGGAGACGAA--GTCCAGTG---------------------------------------------CAGAGCACTGCCGCCATC--CGCAGTTCTCGAAACGCACACCCGCATGAGCGAAGTGACTTACTCTTTCTTTCTCTCA----CGGCGCAGCCTTCAGCCCAGAA------------ATTGCC-ATTG-CCCG---GAGCATC-AAA-TT--GCCTGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACACATCGCAAACTTTGCGAAGAA-------TTGTGAAT-A----------------------------CAGTGCAAAC-AATTGACCGACTTGGACTC------CGTCGAA-C-TC-GGTAAATGTG--AAACGCT-----ATTTAC--C--AACCTGT-CGGCTA----GTTGCTCGACC--------------TCAAGGAGACGAA--AGTTGGTT--------------------------------------AA----GCACACTGCC---CCCACA--CGCAGTTCTCGAATCGCGCATCCGCATGATCGAAGTGACTTACTCTTTCTTGCTCTCG-------CGCAGCCTTCAGCCCAGAA------------ATTGTC-ATTG-CCCG---GAGCAAT-AAC-TT--GCCAGGSizeHit CountTotal NormTotal
No Reads
droFic1
GCACATCGCAAATTCACCGAACAA-------TTGTAATT-----------------------------------------AATTAAGGGTTTTGCATT-------GGCTGCC-C-TC-CGTAGGCGTT-----CCTCATTTCTATTGC--T--GACTTAT-CGGTAA----GTGTTCCAACC--------------GAAAGGACATGGT-TA-ACGGAGCA--------------------------------CAGTGGGCT-CTAGGATACCATCGG--CA--ATCAGTTCACGAGTCGCGCACCCGCATGAGCGAAGTGAATTACTCTTTCTTTCTCTCGC--AGCCTTCAGC-TTCTGCCCAGAAT-------------TCCCAATTG-CCCG---GAGCACA-GAA-TTTGGGCTGCSizeHit CountTotal NormTotal
No Reads
droKik1
GCTCTTCGCAAACTCACAAC--AT-------CT--------CTTTTAAGAAGAG---------------C-TTGAATTAA---------------TGTCAGTTGG------CATTGCTA--AAAAAAATATAA-----------------------------------------------------------------------GTCCT-TA-ACTGGATATAATCTCAACTAGCCTTGGCCCACCACCCTCGCTCTGCCCCCCGAGTACCCCGACCC--AG--CACAGTACGTCATGCGCGC-GACGCATAAACGTTGTCACTGATTCTTTCTTTCTCTCGC---AGCCGCAGCCTTCAGCCCGAAATCGCC-------ATTGCC-ACTGCCCCG---AGGCAACCCAA-TT--GGCTGCSizeHit CountTotal NormTotal
No Reads
droAna3
GCACTTCGGAAAGTCATTGAA----------T------TCCCAAATAGCAATTA---------------C-GTGCGAATA---------------TGTCAGTTGG------C-TTACTC--AAGGGTG--TAAACTG------TTTACCAGCGCATTGT--TTGTTGATT-GTCACCCAACTGGACCAGTTACGGTCATAACAATTGGATATTTGC-------------------------------------------GAG-TTAGGGGACCAAGGG--CGATCATAATCGCGATTTCGTACGGCTGCATGAGCGAGGTCACTTGCTCTTTCTTTCTCTGGCACAGCCTTCAGCGTTCAGCTGAGAATCGGC-------A-GACA-ATTG-ACCG---AGGAAAC-CAA-TT--GGCTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................AGCGTTCAGCTGAGAATCGGC-------A-GA.....................................2411.001010000
........................................................................................................................................................................................................................................................................................................TTCGTACGGCTGCATGAGCGAGGTC....................................................................................................2511.001100000
..................................................................................................................................................................TGTTGATT-GTCACCCAACTGGACCAGT.......................................................................................................................................................................................................................................2711.001010000
..................................................................................................CAGTTGG------C-TTACTC--AAGGGT......................................................................................................................................................................................................................................................................................................2011.001000010
...........................................................................................................................................................................................................................................................................GGGACCAAGGG--CGATCATAA....................................................................................................................................2011.001100000
droBip1
GCACTTCGCAAAGTCATTGAA----------T------TCCCAAACAATTATTA---------------C-GTGCAAATA---------------TGTCAGTTTC------T-GCATTC--AAGGGTG--TAAACTG------TTTACCATCGCATTGT--TTGGTGATTGGTTAGCCAACTGGACCAGTTACGGCCTAAATAAATAAATATCTGGCAG------------------------------------------T-CGGGGAGACCAAGGG--CGATTATCATCGCGATTTTGTACGCCTGTATGAGCGAGGTCACTTGCTCTTTCTTTCTCTGGCACAGCCTTCAGCGTTCAGCTGAGAATCGGC-------A-GACA-ATTG-ACCG---AGGAAAC-CAA-TT--GGCTGCSizeHit CountTotal NormTotal
No Reads
dp5
TCTTTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----GTAGCCGCCTTCAGCAGA-------------------CA-ATTG-CCAAAAGCAGCAACCCAT-TT--AACTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCTTTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----GTAGCCGCCTTCAGCAGA-------------------CA-ATTG-CCAAAAGCAGCAACCCAT-TT--CACTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/19/2015 at 05:27 AM