ID:

dsi_7972

Coordinate:

2r:20900410-20900462 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.8 -4.4 -4.4

Flybase annnotation

intron [2r_20900509_20900702_+]; exon [2r_20900463_20900508_+]; CDS [2r_20900463_20900508_+]; CDS [2r_20900338_20900409_+]; exon [2r_20900308_20900409_+]; intron [2r_20900410_20900462_+]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------##############################################----
GCGAGTGCGTCTGGTCGCAGGAGTATGTGATGCAGCGTCTCATCAACTTCGTAAGTTCCTGGCGCGCAGCTCCAAGCTCCTGATCCATTGTCCTTTTTTATAGATACGACAGAACCAGGATGCCTGCGGGGACAACGAGTGTTTAGATGGTCA
**************************************************...((((..(((.((...)).))))))).........................**************************************************
Read size # Mismatch Hit Count Total Norm Total M024
male body
O001
Testis
SRR553486
Makindu_3 day-old ovaries
M023
head
SRR553485
Chicharo_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
SRR902008
ovaries
M025
embryo
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
M053
female body
O002
Head
........................................................................................................TACGACAGAACCAGGATGCCTGCGGG....................... 26 0 1 5.00 5 0 0 2 0 1 1 1 0 0 0 0 0
.......................................................................................................ATACGACAGAACCAGGATGCC............................. 21 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0
........................................................................................................TACGACAGAACCAGGATGCCT............................ 21 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TCATACGACAGAACCAGGATGCCTGC.......................... 26 2 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0
...................................................................AGCTCCAAGCTCCTGATCCA.................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
GCGAGTGCGTCTGGTCGCAGGA................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TACGACAGAACCAGGATGCCTGC.......................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................ACAGAACCAGGATGCCTGC.......................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
GCGAGTGCGTCTGGTCGCAGGAC.................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGAACCAGGATGCCTGCGGGG...................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................TACGACAGAACCAGGATGCCTGCGGGGAC.................... 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........GTCTGGTCGCAGGAGTATGTG............................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................CATACGACAGAACCAGGATGCCTGG.......................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AACCAGGATGCCTGCGGGGACAACGAG.............. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................TACGACAGAACCAGGATGCCTGCGGGG...................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................CAAGCTCCTGATCCATTGTCC............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
........GTCTGGTCGCAGGAGTGTGTGAT.......................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........CTGGTCGCAGGAGTATGTGAT.......................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................GCGTCTCATCAACTTCGTAAG.................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................TAGATGCGACAGAGCCGGGATG............................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................TACGACAGAACCAGGATGCCC............................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTCATACGACAGAACCAGGATGCCT............................ 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................TACGACAGAACCAGGATGCCTGCGG........................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................GCAGGAGTATGTGATGCAGCGTC.................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................CTCCTGATCCATTGTCCTTTT........................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................ACAGAACCAGGATGCCTGCGGGGAC.................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................CCAAGCGCCTGATCCA.................................................................. 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
.CGAGTGCGTCTGGTC......................................................................................................................................... 15 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
........GGCTGATCGCATGAGTATG.............................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGTCCTTTTTTATCGAAA............................................... 18 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................ATACGTCAGAACGAGG.................................. 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGCTCACGCAGACCAGCGTCCTCATACACTACGTCGCAGAGTAGTTGAAGCATTCAAGGACCGCGCGTCGAGGTTCGAGGACTAGGTAACAGGAAAAAATATCTATGCTGTCTTGGTCCTACGGACGCCCCTGTTGCTCACAAATCTACCAGT
**************************************************...((((..(((.((...)).))))))).........................**************************************************
Read size # Mismatch Hit Count Total Norm Total M023
head
SRR618934
dsim w501 ovaries
SRR902009
testis
SRR553488
RT_0-2 hours eggs
M025
embryo
M053
female body
O001
Testis
SRR553485
Chicharo_3 day-old ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
.....................................................................................................TCTATGCTGTCTTGGTCCTAC............................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..CTCACGCAGACCAGCGTCCTC.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................GGAGCTCACAAATCTACCAG. 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................GGACCGCGCGTCGAGGTTCGAGGACT...................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................CAAAGACCGCGCGTCGAG................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TCTATGCTGTCTTGGTCCTA................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................CCGCGCGTCGAGGTTCGAGGG........................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................GAGGTTCGAGGACTAGGT.................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................GAGGACTAGGTAACAGGAAAA........................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............CCAGCGTCCTCATACACTAC......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................ATCTATGCTGTCTTGGTCCTA................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
..........................................................................TCGAGGACTAGGTAACAGGGA.......................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................AGTAGTTGAAGCATTCAAGGA............................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
......................................................................ATTATCGAGGACTAGGTAACAG............................................................. 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
............................................................................................AAAAATATATCTATGCTGTCAT....................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1
.........................................................GAACCGCGAGTCGAGGTTCGT........................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.........................................................................TTGGAGGACTAGGTAAAAG............................................................. 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................TATGGTGACTTGGTGCTACG.............................. 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................AAAAAAAATTTGTGCTGTCT........................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
........................................GTAGTTGAAGCAGTC.................................................................................................. 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
................................................................CCGTCGAGGTACGAGGA........................................................................ 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20900360-20900512 + dsi_7972 GCGAGTGCGTCTGGTCGCAGGAGTATGTGATGCAGCGTCTCATCAACTTCGTAAGTTCCTGG--C--GC--GCAG------------------------CT-CCAA------------GCT----C-------------C--TGATCCATTGTCCT-TT---TTTATAGATACGACAGAACCAGGATGCCTGCGGGGACAACGAGTGTTTAGATGGTCA
droSec2 scaffold_23:294229-294382 + GCGAGTGCGTCTGGTCGCAGGAGTATGTGATGCAGCGTCTCATCAACTTCGTAAGTTCCTG--TCC-GC--GCAG------------------------CT-CCAA------------GCT----C-------------C--TGATCAATTGTCCT-TT---TTTATAGATACGACAGAACCAGGATGCCTGCGGGGACAACGAGTGTTTAGATGGTTA
dm3 chr2R:20420015-20420170 + GCGAGTGCGTCTGGTCGCAGGAGTATGCGATGCAACGCCTCATCAACTTCGTAAGTTTCTG--TGC-GC--GCAG------------------------CT-CCCA------------GCT----C-------------ATTTGATCAAGTGTACT-TC---CTTATAGATACGACAAAACCAGAATGCCTGCGGGGACAACGAGTGTTACGATGGTCA
droEre2 scaffold_4845:21791639-21791792 + GCGAGTGCGTCTGGTCGCAGGAGAATGCGATGCAGCGGCTTATCAACTTCGTAAGTTCATG--TGC-GC--GCAG------------------------CT-CCGA------------GCT----C-------------C--TGATCCAATGTCCT-TT---CTTACAGATACGACAGAACCAGAATGCCTGCACGGACACCGAGTGTTTGGATGGTCA
droYak3 2R:20389108-20389262 + GCGAGTGCGTCTGGTCGCAGGAGTACGCGATGCAGCGCATTATCAACTTCGTAAGTTCCCT--TGC-GC--ACAG------------------------CT-CCAA------------ACT----C-------------C--TGATCCAATGTCCTTTT---CTTACAGATACGACAGAACCAGGATGCCTGCACGGACACCGAGTGCTTGGATGGTTA
droEug1 scf7180000409464:783959-784117 + GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGGCTTATCAACTTCGTGAGTTTCAGT--TCC-AGTG------------------------GGTAC-TGAT------------CTT----T-------------C--TGATCAAATGTACT-TTTTCCTTCTAGATTCGCCAGAACCAGAACGCCTGCACAGACACAGAGTGCTTTGATGGTGA
droBia1 scf7180000301754:3491154-3491308 - GCGAGTGCGTCTGGTCGCAGGAGTACGCGATGCAGCGGCTTATCAACTTTGTGAGTTCCGAA--GCT-A-TG------------------------GGTTC-CCTT------------ATT----C-------------C--TGATCCAATATCCT-GT---CTTACAGATTCGCCAGAACCAGAACGCCTGTACAGACACCGAGTGCTTCGATGGTGA
droTak1 scf7180000414175:107188-107344 - GCGAGTGCGTGTGGTCGCAGGAATATGCGATGCAGAGGCTAATCAACTTTGTGAGTTCCTGA--TTT-TATG------------------------GGTTT-TCTA------------ATT----C-------------C--TGATCCAATATCCTGTC---CTTGTAGATACGCCAGAACCAGAATGCCTGCTCAGACACCGAGTGCTTCGATGGTGA
droEle1 scf7180000491214:4579183-4579340 - GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGCCTAATCAACTTTGTAGGTTGCACC--ATT-AATG------------------------AGGCC-TCTT------C-----TTT----T-------------C--TGATCCTATATCTCTTC---CTTGCAGATACGCCAGAACCAGAATGCCTGCACAGATACCGAGTGCTTCGATGGTAA
droRho1 scf7180000776849:108412-108568 + GCGAGTGCGTCTGGTCGCAAGAATATGCGATGCAGCGGCTTATCAACTTTGTAAGTTCCTGG--ATT-AATG------------------------GGTTC-TCCT------------CTA----T-------------C--TAATCCTATGTCTCTTC---CTTGCAGATACGCCAGAACCAGAATGCCTGCACAGATACCGAGTGCTTCGATGGTGA
droFic1 scf7180000453342:272189-272347 + GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGGCTCATAAACTTTGTAGGTTCCAGG--CTT-ACCG------------------------GCTAATTAAA------------CCT----T-------------C--TGGTACAATCTCCT-TTTT-ATTTCAGATACGCCAGAACCAGAATGCCTGCTCAGACACCGAGTGCTTCGATGGTGA
droKik1 scf7180000302277:753841-754017 - GCGAGTGCGTCTGGTCGCAGGAGTATGCGATGCAGCGACTCATCAACTTGGTGAGTTCCCAG--GCT-CTTG------------------------AGT-------CCTGCCCGTCGTCCA----GCTGTTCCTAATCCCTCTTCTGGATTACCCT-TT---CTTATAGATACGCCAGAACCAGAATGCCTGCACGGACACCGAGTGCTTTGATGGTGG
droAna3 scaffold_13266:15968227-15968391 + GCGAGTGCGTTTGGTCGCACGAATTTGCTATGCAGAGGCTAATAAACTTTGTAAGTGCCAAGG-ACT-GCTGCAGCTCCTTAGCCACTGA--CAT--GT-------------------AC-------------------------ATACATATATT-TT---CTTTTAGATTCGCCAAAATCAGAATGCCTGTACGGACACTGAGTGCTTCGACGGTGA
droBip1 scf7180000396567:457744-457916 + GCGAGTGCGTTTGGTCGCACGAACTGGCGATGCAGAGGCTAATAAACTTTGTAAGTGCCAAGG-ACTAA-CT-AGCTCCTTAGCCAC-------------------------------TCT----TACGTTTCTATGATA--TGTAT--GCATATT-TT---CTTTTAGATTCGCCAGAATCAGAATGCCTGTACGGACACAGAGTGCTTTGACGGTGA
dp5 3:18245765-18245920 - GCGAGTGCGTTTGGTCGCACGAATTCGCTATGCAGCGTCTTATAAACTTTGTAAGTTGACT--TTC-TC--CCA-------------------------CA-CCGG------------GCT----CCCATTT---TGAT---------ATGATCCT-TT---GTGGTAGATTCGTCAAAACCAGAACACATGCACAGACACCGAGTGCATCGATGGTGA
droPer2 scaffold_34:188334-188489 - GCGAGTGCGTTTGGTCGCACGAATTCGCTATGCAGCGTCTTATAAACTTTGTAAGTTGACT--TTC-TC--CCA-------------------------CA-CCGG------------GCT----CCCATTT---TGAT---------ATGATCCT-TT---GTGGTAGATTCGTCAAAACCAGAACACATGCACAGACACCGAGTGCATCGATGGTGA
droWil2 scf2_1100000004512:2037490-2037658 + GCGAATGCGTTTGGTCGCATGAATATGCTATGCAGAGGTTAATCAATTTTGTAAGTTTAAC-----T------A------------TAC-------AGT-------ATATACAGCATATCA----TATGCACCTAATATT--TGGTTT-AAATAAA-CA---CTCCTAGATTCGCCAAAATCAAAATGTTTGCACAGATACCGAGTGTTTTGATGGT--
droVir3 scaffold_12875:14748500-14748671 - GCGAATGCATTTGGTCCCATGAGTTGGCCATGCAAAGGCTCCTCAACTTTGTAAGTTGAGC-----------------------CACAAATCTA-ATGT-----ATATATATATATATATATCTATATCTA--------------TATAATATTTG-TA---CTGATAGATACGCCAAAATCAGAATGCCTGCACAGATACCGAGTGCATTGATGGTAA
droMoj3 scaffold_6496:10220431-10220603 - GCGAATGCATTTGGTCGCATGAATTGGCGATGCAACGGCTTATCAATTTTGTAAGTGGACAG--CT-GA--CTA-------------------------GA-CTATGTAAATGT----ATA----TATGTATATATAATA--TGAGTAATTGTA-T-CA---TTAACAGATACGTCAGAATCAGAATGCCTGCACAGATACCGAGTGCATAGATGGTAA
droGri2 scaffold_15245:14758548-14758714 - GCGAATGCATTTGGTCCCATGAAATGGCCATGCAAAGGCTTATCAATTTTGTAAGTTTCCT--TCA--------A-TTGTTAGCCACAAC--TATGTGTAA-AGAT------------ATT----T-------------A--TAATCAAA----CTATC---TCAACAGATACGCCAGAATCAGAACGCTTGCTCCGATACTACGTGCATTGATGGTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCGAGTGCGTCTGGTCGCAGGAGTATGTGATGCAGCGTCTCATCAACTTCGTAAGTTCCTGG--C--GC--GCAG------------------------CT-CCAA------------GCT----C-------------C--TGATCCATTGTCCT-TT---TTTATAGATACGACAGAACCAGGATGCCTGCGGGGACAACGAGTGTTTAGATGGTCASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..........................................................................................................................................................................TACGACAGAACCAGGATGCCTGCGGG.......................2615.00500000012010010000
.........................................................................................................................................................................ATACGACAGAACCAGGATGCC.............................2113.00330000000000000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCT............................2113.00302000010000000000
.........................................................................AG------------------------CT-CCAA------------GCT----C-------------C--TGATCCA......................................................................2012.00200002000000000000
GCGAGTGCGTCTGGTCGCAGGA.....................................................................................................................................................................................................2211.00101000000000000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCTGC..........................2311.00100000001000000000
..............................................................................................................................................................................ACAGAACCAGGATGCCTGC..........................1911.00100100000000000000
GCGAGTGCGTCTGGTCGCAGGAC....................................................................................................................................................................................................2311.00101000000000000000
................................................................................................................................................................................AGAACCAGGATGCCTGCGGGG......................2111.00100000000010000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCTGCGGGGAC....................2911.00100100000000000000
........GTCTGGTCGCAGGAGTATGTG..............................................................................................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................AACCAGGATGCCTGCGGGGACAACGAG..............2711.00100010000000000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCTGCGGGG......................2711.00100000010000000000
.......................................................................................................CAA------------GCT----C-------------C--TGATCCATTGTCC................................................................2111.00100000100000000000
..........CTGGTCGCAGGAGTATGTGAT............................................................................................................................................................................................2111.00100000000010000000
..................................GCGTCTCATCAACTTCGTAAG....................................................................................................................................................................2111.00100001000000000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCC............................2111.00101000000000000000
..........................................................................................................................................................................TACGACAGAACCAGGATGCCTGCGG........................2511.00100000000000010000
................GCAGGAGTATGTGATGCAGCGTC....................................................................................................................................................................................2311.00100001000000000000
.......................................................................................................................CT----C-------------C--TGATCCATTGTCCT-TT---T........................................................2111.00100000010000000000
..............................................................................................................................................................................ACAGAACCAGGATGCCTGCGGGGAC....................2511.00100001000000000000
.CGAGTGCGTCTGGTC...........................................................................................................................................................................................................1540.25100000001000000000
droSec2
GCGAGTGCGTCTGGTCGCAGGAGTATGTGATGCAGCGTCTCATCAACTTCGTAAGTTCCTG--TCC-GC--GCAG------------------------CT-CCAA------------GCT----C-------------C--TGATCAATTGTCCT-TT---TTTATAGATACGACAGAACCAGGATGCCTGCGGGGACAACGAGTGTTTAGATGGTTASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
............................................................................................................................................................................CGACAGAACCAGGATGCCTGC..........................2111.0010010
........GTCTGGTCGCAGGAGTATGTG..............................................................................................................................................................................................2111.0010100
.............................ATGCAGCGTCTCATCAACTTC.........................................................................................................................................................................2111.0010100
.......................TATGTGATGCAGCGTCTCATCA..............................................................................................................................................................................2211.0010100
...................................................................................................................................................................................ACCAGGATGCCTGCGGGGA.....................1911.0011000
...............CGCAGGAGTATGTGATGCAGC.......................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................AACCAGGATGCCTGCGGGGAC....................2111.0010010
...............CGCAGGAGTATGTGATGCAGCGT.....................................................................................................................................................................................2311.0011000
..........................................................................................................................................................................................TGCCTGCGGGGACAACGAGT.............2011.0010010
...............................................................................................................................................................................CAGAACCAGGATGCCTGCGGGGT.....................2311.0010100
........GTCTGGTCGCAGGAGTATGTGAT............................................................................................................................................................................................2311.0010100
........GTCTGGTCGCAGGAGTATGT...............................................................................................................................................................................................2011.0010100
................................................................................................................................................................................AGAACCAGGATGCCTGCGGGG......................2111.0010100
........................ATGTGATGCAGCGTCTCATCAACT...........................................................................................................................................................................2411.0010001
.......................................................................................................................................................................AGATACGACAGAACCAGGATGC..............................2211.0011000
..................................................................................................................................................................................AACCAGGATGCCTGCGGGGA.....................2011.0011000
..............................................................................................................................................................................................TGCGGGGACAACGAGTGTTTAGATGT...2611.0011000
.......CGTCTGGTCGCAGGAGTATGTG..............................................................................................................................................................................................2211.0010010
..................AGGAGTATGTGATGCAGC.......................................................................................................................................................................................1811.0010010
.........................TGTGATGCAGCGTCTCATCA..............................................................................................................................................................................2011.0010001
......................................................................................................................................................................................................CAACGAGTGTTTAGATGT...1811.0010010
......GCGTCTGGTCGCAGGAGTATG................................................................................................................................................................................................2111.0010100
..........................GTGATGCAGCGTCTCATCA..............................................................................................................................................................................1911.0010001
........................................................................................................AA------------GCT----C-------------C--TGATCAATTGTCCT-T.............................................................2211.0011000
.CGAGTGCGTCTGGTCGCAGGA.....................................................................................................................................................................................................2111.0010010
dm3
GCGAGTGCGTCTGGTCGCAGGAGTATGCGATGCAACGCCTCATCAACTTCGTAAGTTTCTG--TGC-GC--GCAG------------------------CT-CCCA------------GCT----C-------------ATTTGATCAAGTGTACT-TC---CTTATAGATACGACAAAACCAGAATGCCTGCGGGGACAACGAGTGTTACGATGGTCASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.................................................................................................................................................................................AAACCAGAATGCCTGCGGGGA.....................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000020000000000000000000000100000000000000000000010000000
.....TGCGTCTGGTCGCAGGAGTATGCGAT............................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000011000000
..GAGTGCGTCTGGTCGCAGGAGTATG................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTATGCGATGCAACGCCTCAT................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGAGTATGCGATGCAACGCC....................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000010
.................................................................................................................................................................................................GGGGACAACGAGTGTTACGATGTC..2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GGACAACGAGTGTTACGATGG...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGAGTATGCGATGCAACG......................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000
.....................................................................................................................................................................................................ACAACGAGTGTTACGATG....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............CGCAGGAGTATGCGATGCA.........................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCAGGAGTATGCGATGCAA........................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CTGGTCGCAGGAGTATGC...............................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGAGTATGCGATGCAACGCCT...................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ATACGACAAAACCAGAATGCCT............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCGGGGACAACGAGTGTTA.........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000
.....TGCGTCTGGTCGCAGGAGTATGCGATG...........................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................CAACGAGTGTTACGATGGTCA2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
..........CTGGTCGCAGGAGTATGCGAT............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000
........................................................................................................................................................................................AATGCCTGCGGGGACAACGAGT.............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000
..................................................................................................................................................................................AACCAGAATGCCTGCGGGGACG...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCGGGGACAACG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCAGGAGTATGCGATGCAA........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAGTGCGTCTGGTCGCAGGAGCT..................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCTGGTCGCAGGAGTATGCGAT............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................GCCTGCGGGGACAACGAGTGTTACGATG....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................TACGACAAAACCAGAATGCCTGCGGG.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ATGCCTGCGGGGACAACGAGTG............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...AGTGCGTCTGGTCGCAGGAG....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGTATGCGATGCAACGC.....................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GTGCGTCTGGTCGCAGGAGT...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGTCTGGTCGCAGGAGTATG................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAGAATGCCTGCGGGGACA...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................GACAAAACCAGAATGCCTGCGGGGAC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGAATGCCTGCGGGGACAACGAGTGT...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................TGCCTGCGGGGACAACG................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCGGGGACAACGAGTG............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................AAACCAGAATGCCTGCGGGG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................AGGAGTATGCGATGCAAC.......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........CTGGTCGCAGGAGTATGCGATGCAACG......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GACAACGAGTGTTACGATGGT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................ACAACGAGTGTTACGATGGTC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................GTAAGTTTCTG--TGC-GC--GCAG------------------------........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTGGTCGCAGGAGTATGCGATG...........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGAGTATGCGATGCAACGCCT...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCAACGCCTCATCAACTTCC........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................CAGAATGCCTGCGGGGACAACGAGT.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................CCAGAATGCCTGCGGGGACAA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................CGGGGACAACGAGTGTTAC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCGGGGACAACGAGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........CTGGTCGCAGGAGTATGCG..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................TGCCTGCGGGGACAACGAGTGTTAC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................AGAATGCCTGCGGGGACA...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................AACCAGAATGCCTGCGGGGA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................ACCAGAATGCCTGCGGGGACAAC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GCCTGCGGGGACAACGAGTGTT..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................................................................................................ATGCCTGCGGGGACAACGAG..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GACAACGAGTGTTACGATG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................AACCAGAATGCCTGCGGGGACAA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................GCAGGAGTATGCGATGCAACG......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................GTATGCGATGCAACGCCT...................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGAATGCCTGCGGGGACAACGAGT.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGAATGCCTGCGGGGACAACG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........GTCTGGTCGCAGGAGTATG................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................TGCCTGCGGGGACAACGAGTGTT..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCGGGGACAACGAGTGTTAC........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................ACTTCGTAAGTTTCTG--TGC-GC--G...................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGCCTGCGGGGACAACGAG..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................GATGCAACGCCTCATCAACT...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGAATGCCTGCGGGGACAACGA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
........GTCTGGTCGCAGGAGTATGCG..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................ATGCCTGCGGGGACAACGAGT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
GCGAGTGCGTCTGGTCGCA........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGTTTCTG--TGC-GC--GCAG------------------------CT-C....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................CAGAATGCCTGCGGGGACAAC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CCAGAATGCCTGCGGGGA.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........GTCTGGTCGCAGGAGTATGC...............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCGAGTGCGTCTGGTCGCAGGAGAATGCGATGCAGCGGCTTATCAACTTCGTAAGTTCATG--TGC-GC--GCAG------------------------CT-CCGA------------GCT----C-------------C--TGATCCAATGTCCT-TT---CTTACAGATACGACAGAACCAGAATGCCTGCACGGACACCGAGTGTTTGGATGGTCASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...............CGCAGGAGAATGCGATGCAGCGGC....................................................................................................................................................................................2412.0020100100
....................GAGAATGCGATGCAGCGGCTT..................................................................................................................................................................................2112.0021000100
...............CGCAGGAGAATGCGATGCAGC.......................................................................................................................................................................................2112.0020000020
......GCGTCTGGTCGCAGGAGAATGC...............................................................................................................................................................................................2212.0020000200
...............................................................................................................................................................................................GCACGGACACCGAGTGTTTGGA......2212.0021000100
.......................AATGCGATGCAGCGGCTTATCAACT...........................................................................................................................................................................2511.0011000000
...............................................................TGC-GC--GCAG------------------------CT-CCGA------------GCT----C-------------C--T............................................................................2111.0011000000
............................................................................................................................................................................CGACAGAACCAGAATGCCTGC..........................2111.0011000000
.........................TGCGATGCAGCGGCTTATCA..............................................................................................................................................................................2011.0010000100
........GTCTGGTCGCAGGAGAAT.................................................................................................................................................................................................1811.0010000010
........................................................................................................................................................................................AATGCCTGCACGGACACCGAGT.............2211.0010001000
GCGAGTGCGTCTGGTCGCAGG......................................................................................................................................................................................................2111.0010000100
...........................................................................................................................................................................................GCCTGCACGGACACCGAGTG............2011.0010000010
.........................................................................................................................................................................ATACGACAGAACCAGAATGCCT............................2211.0010000010
.............................................................................................................................................................................................CTGCACGGACACCGAGTGTTTGGATG....2611.0010000010
............GGTCGCAGGAGAATGCGATGCAGC.......................................................................................................................................................................................2411.0010000010
................GCAGGAGAATGCGATGCAGC.......................................................................................................................................................................................2011.0010000010
................................................................GC-GC--GCAG------------------------CT-CCGA------------GCT----C-------------C--TG...........................................................................2111.0011000000
...................................................................................................CT-CCGA------------GCT----C-------------C--TGATCCAATG...................................................................2111.0011000000
........................................................................................................................................................................................AATGCCTGCACGGACACCGAGTGTTTGG.......2811.0010000100
............................................................................................................................................................................CGACAGAACCAGAATGCCTG...........................2011.0010000010
............................................................................................................................................................................CGACAGAACCAGAATGCCTGCA.........................2211.0011000000
.........TCTGGTCGCAGGAGAATGC...............................................................................................................................................................................................1911.0010000100
.............................ATGCAGCGGCTTATCAACT...........................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................GCCTGCACGGACACCGAGTGTTTGGAT.....2711.0010000100
...............CGCAGGAGAATGCGATGCAGCG......................................................................................................................................................................................2211.0011000000
....GTGCGTCTGGTCGCAGGAGAATGC...............................................................................................................................................................................................2411.0010000100
.................CAGGAGAATGCGATGCAGCGGCT...................................................................................................................................................................................2311.0010000010
...............CGCAGGAGAATGCGATGCAGCGGCTTATC...............................................................................................................................................................................2911.0010100000
.........................................................................................................................................................................................ATGCCTGCACGGACACCGAGTGTTTG........2611.0010000100
..............TCGCAGGAGAATGCGATGCAGCGGC....................................................................................................................................................................................2511.0011000000
....GTGCGTCTGGTCGCAGGAGAATGCGATGC..........................................................................................................................................................................................2911.0010000010
......................GAATGCGATGCAGCGGCTTATCAACT...........................................................................................................................................................................2611.0010000100
...............................................................................................................................................................................CAGAACCAGAATGCCTGCACGGACAC..................2611.0011000000
........GTCTGGTCGCAGGAGAATGC...............................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................GGACACCGAGTGTTTGGAT.....1911.0011000000
...................................................................................................................................................................................ACCAGAATGCCTGCACGGACACCG................2411.0011000000
..................................................................................................................................................................................AACCAGAATGCCTGCACGGA.....................2011.0011000000
droYak3
GCGAGTGCGTCTGGTCGCAGGAGTACGCGATGCAGCGCATTATCAACTTCGTAAGTTCCCT--TGC-GC--ACAG------------------------CT-CCAA------------ACT----C-------------C--TGATCCAATGTCCTTTT---CTTACAGATACGACAGAACCAGGATGCCTGCACGGACACCGAGTGCTTGGATGGTTASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..GAGTGCGTCTGGTCGCAGGA.....................................................................................................................................................................................................20121.0021000000000021
...............CGCAGGAGTACGCGATGCAGCGC.....................................................................................................................................................................................2317.00700000070000
...............CGCAGGAGTACGCGATGCAGCGCA....................................................................................................................................................................................2413.00300000030000
...............CGCAGGAGTACGCGATGCAGCG......................................................................................................................................................................................2212.00200000020000
......GCGTCTGGTCGCAGGAGTACGC...............................................................................................................................................................................................2212.00200000020000
...........................................................................................................................................................................................GCCTGCACGGACACCGAGTGCTTG........2411.00100000010000
...............CGCAGGAGTACGCGATGCAG........................................................................................................................................................................................2011.00100000100000
..............................................................................................................................................................................ACAGAACCAGGATGCCTGCACGG......................2311.00100000010000
.................................................................................................................................................................................GAACCAGGATGCCTGCACGG......................2011.00100000010000
..............TCGCAGGAGTACGCGATGCAGCGC.....................................................................................................................................................................................2411.00100000010000
............................GATGCAGCGCATTATCAACT...........................................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................ATACGACAGAACCAGGATGCCT............................2211.00101000000000
...................................................TAAGTTCCCT--TGC-GC--ACAG------------------------CT-CC...................................................................................................................2311.00101000000000
........GTCTGGTCGCAGGAGTACGC...............................................................................................................................................................................................2011.00100000010000
..GAGTGCGTCTGGTCGCAGGC.....................................................................................................................................................................................................2011.00100000000001
........................................................................................................................................................................................GATGCCTGCACGGACACCGAG..............2111.00100000010000
...............CGCAGGAGTACGCGATGCAGCGCAT...................................................................................................................................................................................2511.00100000010000
..................AGGAGTACGCGATGCAGCGC.....................................................................................................................................................................................2011.00100000100000
.........................................................................................................................................................................................ATGCCTGCACGGACACCGAGTGCTT.........2511.00100000010000
.................................................................................................................................................................................GAACCAGGATGCCTGCACGGACACCGA...............2711.00101000000000
...........................................................................................................................................................................................GCCTGCACGGACACCGAGTGCTTGGA......2611.00101000000000
.CGAGTGCGTCTGGTCGCAGGA.....................................................................................................................................................................................................2111.00101000000000
droEug1
GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGGCTTATCAACTTCGTGAGTTTCAGT--TCC-AGTG------------------------GGTAC-TGAT------------CTT----T-------------C--TGATCAAATGTACT-TTTTCCTTCTAGATTCGCCAGAACCAGAACGCCTGCACAGACACAGAGTGCTTTGATGGTGASizeHit CountTotal NormTotal
No Reads
droBia1
GCGAGTGCGTCTGGTCGCAGGAGTACGCGATGCAGCGGCTTATCAACTTTGTGAGTTCCGAA--GCT-A-TG------------------------GGTTC-CCTT------------ATT----C-------------C--TGATCCAATATCCT-GT---CTTACAGATTCGCCAGAACCAGAACGCCTGTACAGACACCGAGTGCTTCGATGGTGASizeHit CountTotal NormTotal
No Reads
droTak1
GCGAGTGCGTGTGGTCGCAGGAATATGCGATGCAGAGGCTAATCAACTTTGTGAGTTCCTGA--TTT-TATG------------------------GGTTT-TCTA------------ATT----C-------------C--TGATCCAATATCCTGTC---CTTGTAGATACGCCAGAACCAGAATGCCTGCTCAGACACCGAGTGCTTCGATGGTGASizeHit CountTotal NormTotal
No Reads
droEle1
GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGCCTAATCAACTTTGTAGGTTGCACC--ATT-AATG------------------------AGGCC-TCTT------C-----TTT----T-------------C--TGATCCTATATCTCTTC---CTTGCAGATACGCCAGAACCAGAATGCCTGCACAGATACCGAGTGCTTCGATGGTAASizeHit CountTotal NormTotal
No Reads
droRho1
GCGAGTGCGTCTGGTCGCAAGAATATGCGATGCAGCGGCTTATCAACTTTGTAAGTTCCTGG--ATT-AATG------------------------GGTTC-TCCT------------CTA----T-------------C--TAATCCTATGTCTCTTC---CTTGCAGATACGCCAGAACCAGAATGCCTGCACAGATACCGAGTGCTTCGATGGTGASizeHit CountTotal NormTotal
No Reads
droFic1
GCGAGTGCGTCTGGTCGCAGGAATATGCGATGCAGCGGCTCATAAACTTTGTAGGTTCCAGG--CTT-ACCG------------------------GCTAATTAAA------------CCT----T-------------C--TGGTACAATCTCCT-TTTT-ATTTCAGATACGCCAGAACCAGAATGCCTGCTCAGACACCGAGTGCTTCGATGGTGASizeHit CountTotal NormTotal
No Reads
droKik1
GCGAGTGCGTCTGGTCGCAGGAGTATGCGATGCAGCGACTCATCAACTTGGTGAGTTCCCAG--GCT-CTTG------------------------AGT-------CCTGCCCGTCGTCCA----GCTGTTCCTAATCCCTCTTCTGGATTACCCT-TT---CTTATAGATACGCCAGAACCAGAATGCCTGCACGGACACCGAGTGCTTTGATGGTGGSizeHit CountTotal NormTotal
No Reads
droAna3
GCGAGTGCGTTTGGTCGCACGAATTTGCTATGCAGAGGCTAATAAACTTTGTAAGTGCCAAGG-ACT-GCTGCAGCTCCTTAGCCACTGA--CAT--GT-------------------AC-------------------------ATACATATATT-TT---CTTTTAGATTCGCCAAAATCAGAATGCCTGTACGGACACTGAGTGCTTCGACGGTGASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.........................................................................................................................................................................................ATGCCTGTACGGACACTGAGT.............2112.002000002
...............................................................................................................................................................................................GTACGGACACTGAGTGCTTCGAC.....2312.002000020
............................................................................................................................................................................CGCCAAAATCAGAATGCCTGTACGGA.....................2612.002000020
.........................................................................................................................................................................................ATGCCTGTACGGACACTGAGTGCTTC........2612.002110000
.......................................................................................................................................................................................................ACTGAGTGCTTCGACGGTGA2011.001100000
.............................................................................................................................................................................................CTGTACGGACACTGAGTGC...........1911.001000001
...............................................................................................................................................................................................GTACGGACACTGAGTGCTTCGACG....2411.001000010
....................................................AAGTGCCAAGG-ACT-GCTGC..................................................................................................................................................1911.001100000
...................CGAATTTGCTATGCAGAGGCT...................................................................................................................................................................................2111.001000010
........GTTTGGTCGCACGAATTTGCTAT............................................................................................................................................................................................2311.001000010
......GCGTTTGGTCGCACGAATTTGCTATGC..........................................................................................................................................................................................2711.001010000
...............................................TTTGTAAGTGCCAAGG-ACT-GC.....................................................................................................................................................2111.001100000
........GTTTGGTCGCACGAATTTGCTA.............................................................................................................................................................................................2211.001000010
............GGTCGCACGAATTTGCTATGCAGAGGCT...................................................................................................................................................................................2811.001001000
..................................................GTAAGTGCCAAGG-ACT-GCTGC..................................................................................................................................................2111.001100000
.....................................................................CTGCAGCTCCTTAGCCACTGA--...............................................................................................................................2111.001100000
...........................................................................................................................................................................................GCCTGTACGGACACTGAGTGCTTC........2411.001000010
.............................................................................................................................................................................GCCAAAATCAGAATGCCTGTACGGA.....................2511.001000010
...........................................................................................................................................................................................GCCTGTACGGACACTGAGT.............1911.001000010
....................................................................................................................................................................................TCAGAATGCCTGTACGGA.....................1811.001001000
..................ACGAATTTGCTATGCAGAGGCTA..................................................................................................................................................................................2311.001000010
..................................................................................................................................................................................AATCAGAATGCCTGTACGGACAC..................2311.001000010
...............................................................................................................................................................................CAAAATCAGAATGCCTGTACGGA.....................2311.001100000
........GTTTGGTCGCACGAATTTGCTATGCAGA.......................................................................................................................................................................................2811.001000010
......................................................................................................................................................................................AGAATGCCTGTACGGACACT.................2011.001000001
.......................................................................................................................................................................................GAATGCCTGTACGGACACTGA...............2111.001001000
.......................................................................................................................................................................................GAATGCCTGTACGGACACTGAGTGCTTC........2811.001100000
........................................................................................................................................................................................AATGCCTGTACGGACACTGAGTG............2311.001010000
.........................................................................................................................................................................ATTCGCCAAAATCAGAATGCCTGTACG.......................2711.001010000
droBip1
GCGAGTGCGTTTGGTCGCACGAACTGGCGATGCAGAGGCTAATAAACTTTGTAAGTGCCAAGG-ACTAA-CT-AGCTCCTTAGCCAC-------------------------------TCT----TACGTTTCTATGATA--TGTAT--GCATATT-TT---CTTTTAGATTCGCCAGAATCAGAATGCCTGTACGGACACAGAGTGCTTTGACGGTGASizeHit CountTotal NormTotal
No Reads
dp5
GCGAGTGCGTTTGGTCGCACGAATTCGCTATGCAGCGTCTTATAAACTTTGTAAGTTGACT--TTC-TC--CCA-------------------------CA-CCGG------------GCT----CCCATTT---TGAT---------ATGATCCT-TT---GTGGTAGATTCGTCAAAACCAGAACACATGCACAGACACCGAGTGCATCGATGGTGASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
........GTTTGGTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2813.0030210000000
........GTTTGGTCGCACGAATTCGCT..............................................................................................................................................................................................2113.0030300000000
................................................................................................................................................................................................CACAGACACCGAGTGCATC........1912.0020200000000
........GTTTGGTCGCACGAATTCGCTATGCA.........................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................................AAACCAGAACACATGCACAGACACCGAGT.............2911.0010100000000
...........TGGTCGCACGAATTCGCTATGCAGCGT.....................................................................................................................................................................................2711.0010000001000
.............GTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2311.0010100000000
...................................................TAAGTTGACT--TTC-TC--CCA-------------------------CA-C....................................................................................................................2111.0010100000000
.......CGTTTGGTCGCACGAATTCGC...............................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................ACCAGAACACATGCACAGACACCG................2411.0010000001000
...........TGGTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2511.0010000000100
..........TTGGTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2611.0010000000001
...............................................................................................................................................................................CAAAACCAGAACACATGCAC........................2011.0010100000000
...........................................................................................................................................................................TCGTCAAAACCAGAACACATGCACA.......................2511.0010100000000
.............................................................................................................................................................................................ATGCACAGACACCGAGTGC...........1911.0010100000000
..............................................CTTTGTAAGTTGACT--TTC-TC--C...................................................................................................................................................2111.0010100000000
.........TTTGGTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................GCACAGACACCGAGTGCATCGATG....2411.0010100000000
droPer2
GCGAGTGCGTTTGGTCGCACGAATTCGCTATGCAGCGTCTTATAAACTTTGTAAGTTGACT--TTC-TC--CCA-------------------------CA-CCGG------------GCT----CCCATTT---TGAT---------ATGATCCT-TT---GTGGTAGATTCGTCAAAACCAGAACACATGCACAGACACCGAGTGCATCGATGGTGASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
........GTTTGGTCGCACGAATTCGCT..............................................................................................................................................................................................2112.002000002
.....TGCGTTTGGTCGCACGAATTCGC...............................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................CAAAACCAGAACACATGCACAGA.....................2311.001100000
...............................................................................................................................................................................CAAAACCAGAACACATGCAC........................2011.001010000
............GGTCGCACGAATTCGCTATGCAGC.......................................................................................................................................................................................2411.001010000
...........................................................................................................................................................................TCGTCAAAACCAGAACACATGCAC........................2411.001010000
droWil2
GCGAATGCGTTTGGTCGCATGAATATGCTATGCAGAGGTTAATCAATTTTGTAAGTTTAAC-----T------A------------TAC-------AGT-------ATATACAGCATATCA----TATGCACCTAATATT--TGGTTT-AAATAAA-CA---CTCCTAGATTCGCCAAAATCAAAATGTTTGCACAGATACCGAGTGTTTTGATGGT--SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...........................................................................................................................................................................................GTTTGCACAGATACCGAGTGTT..........2212.00200200
....................GAATATGCTATGCAGAGGT....................................................................................................................................................................................1912.00201100
.......................................................................................................................................................................................AAATGTTTGCACAGATACCGAGTGT...........2512.00200200
............................................................................................................................................................................................TTTGCACAGATACCGAGTGTT..........2111.00100100
..............................................................................................................................................................................................TGCACAGATACCGAGTGTTTT........2111.00100100
.........................TGCTATGCAGAGGTTAATCA..............................................................................................................................................................................2011.00100001
.....................................................................................................................................................................................................ATACCGAGTGTTTTGATGGT--2011.00100100
.................CATGAATATGCTATGCAGAGGTTAAT................................................................................................................................................................................2611.00100100
........................................................................................................................................................................................AATGTTTGCACAGATACCGAGTGT...........2411.00100100
...................................................................................................................................................................................................AGATACCGAGTGTTTTGATGGT--2211.00100100
...........................................................................................................................................................................................GTTTGCACAGATACCGAGTGTTTTGA......2611.00100100
....................................................................................................................................................................................................GATACCGAGTGTTTTGATGGT--2111.00100100
.............................................................................................................................................................................................TTGCACAGATACCGAGTGTT..........2011.00100100
........GTTTGGTCGCATGAATATG................................................................................................................................................................................................1911.00110000
..................ATGAATATGCTATGCAGAGGTT...................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................................ACAGATACCGAGTGTTTTGAT.....2111.00100100
...................................................................................................................................................................................................AGATACCGAGTGTTTTGATG....2011.00100100
.............................ATGCAGAGGTTAATCAAT............................................................................................................................................................................1820.50100010
droVir3
GCGAATGCATTTGGTCCCATGAGTTGGCCATGCAAAGGCTCCTCAACTTTGTAAGTTGAGC-----------------------CACAAATCTA-ATGT-----ATATATATATATATATATCTATATCTA--------------TATAATATTTG-TA---CTGATAGATACGCCAAAATCAGAATGCCTGCACAGATACCGAGTGCATTGATGGTAASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..........TTGGTCCCATGAGTTGGCCA.............................................................................................................................................................................................2017.007001001000000000201010010000000000000000000000000000000000000000
........ATTTGGTCCCATGAGTTGGCC..............................................................................................................................................................................................2115.005000001000000000000000000000011010100000000000000000000000000000
..........TTGGTCCCATGAGTTGGC...............................................................................................................................................................................................1814.004001001010100000000000000000000000000000000000000000000000000000
..........TTGGTCCCATGAGTTGGCC..............................................................................................................................................................................................1913.003001001010000000000000000000000000000000000000000000000000000000
.........TTTGGTCCCATGAGTTGGCCA.............................................................................................................................................................................................2113.003000000000000000000001100000000010000000000000000000000000000000
..................ATGAGTTGGCCATGCAAAGG.....................................................................................................................................................................................2013.003000100000000000000000000000001000000000000000000000000000000010
.....................AGTTGGCCATGCAAAGGCTCC.................................................................................................................................................................................2112.002000000000000000000000000000001010000000000000000000000000000000
......................GTTGGCCATGCAAAGGCTCCT................................................................................................................................................................................2112.002000000000000000000000000000010000000000100000000000000000000000
.................................................................................................................................................................................................ACAGATACCGAGTGCATTGATG....2212.002000000000000000000000000000000000200000000000000000000000000000
......GCATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2212.002001000000100000000000000000000000000000000000000000000000000000
...AATGCATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2512.002000000000000000000000000000001000000000000000000000000000000010
.........................................................................................................................................................................ATACGCCAAAATCAGAATGCCT............................2212.002000000000000000000100000000000000000000000000000000000000000010
.............................................................................................................................................................................................CTGCACAGATACCGAGTGCATTG.......2312.002000000000000000000000000000000000200000000000000000000000000000
.............GTCCCATGAGTTGGCCATGC..........................................................................................................................................................................................2012.002001100000000000000000000000000000000000000000000000000000000000
...............................GCAAAGGCTCCTCAACTT..........................................................................................................................................................................1812.002002000000000000000000000000000000000000000000000000000000000000
....ATGCATTTGGTCCCATGAGTT..................................................................................................................................................................................................2112.002001000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................AATCAGAATGCCTGCACAGATACC.................2412.002002000000000000000000000000000000000000000000000000000000000000
............GGTCCCATGAGTTGGCCATGCAAAGGC....................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATCAGAATGCCTGCACAGATAC..................2212.002101000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ACAGATACCGAGTGCATTGAT.....2112.002000000000000001000000000000000000000000000000000000000000000010
....................GAGTTGGCCATGCAAAGGCTCCT................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CAAAATCAGAATGCCTGCACAGATACCGA...............2911.001000000000000000000000000000000000000000000000000000000000000010
.............................ATGCAAAGGCTCCTCAAC............................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
GCGAATGCATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
................CCATGAGTTGGCCATGCAAAGGCTCCT................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
............................CATGCAAAGGCTCCTCAACTTC.........................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TACGCCAAAATCAGAATGCC.............................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGCCAAAATCAGAATGCCTGC..........................2111.001000000000000000000000000000000000000000100000000000000000000000
............................CATGCAAAGGCTCCTCAAC............................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......CATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..................ATGAGTTGGCCATGCAAAGGCTCC.................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGCCTGCACAGATACCGAGTGCAT.........2411.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAGATACCGAGTGCATTGATGTC..2311.001000000000000000000000100000000000000000000000000000000000000000
.................CATGAGTTGGCCATGCAAAGG.....................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................CGCCAAAATCAGAATGCCT............................1911.001000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATACCGAGTGCATTGATG....1811.001000000000000000000000000000000000000000000000000000000000001000
.............................ATGCAAAGGCTCCTCAACT...........................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ATACGCCAAAATCAGAATGCCTG...........................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................TGCAAAGGCTCCTCAACTTT.........................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAGAATGCCTGCACAGATACCGAGTGC...........2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................TACGCCAAAATCAGAATGCCTGC..........................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ATACGCCAAAATCAGAATGCCTGCACAG......................2811.001000000000000000000000000000000000000100000000000000000000000000
..............................TGCAAAGGCTCCTCAACTT..........................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
............GGTCCCATGAGTTGGCCATG...........................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........ATTTGGTCCCATGAGTTGGCCA.............................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............GGTCCCATGAGTTGGCCATGCAAA.......................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGCCTGCACAGATACCGAGTGCATTG.......2611.001000000000000000000000000000000010000000000000000000000000000000
...................TGAGTTGGCCATGCAAAGGC....................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.........TTTGGTCCCATGAGTTGGCC..............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........ATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................CATGCAAAGGCTCCTCAACTT..........................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCACAGATACC.................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AATCAGAATGCCTGCACAGAT....................2111.001000000000000000000000000000001000000000000000000000000000000000
....ATGCATTTGGTCCCATGAGTTGGCCA.............................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................CAGATACCGAGTGCATTGAT.....2011.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................AGAATGCCTGCACAGATACC.................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GAATGCCTGCACAGATACCGAGT.............2311.001001000000000000000000000000000000000000000000000000000000000000
..GAATGCATTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
........ATTTGGTCCCATGAGTTG.................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.CGAATGCATTTGGTCCCATGAGTT..................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CAAAATCAGAATGCCTGCACA.......................2111.001001000000000000000000000000000000000000000000000000000000000000
.........TTTGGTCCCATGAGTTGGC...............................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................AAAATCAGAATGCCTGCACAGA.....................2211.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................AATGCCTGCACAGATACCGAGTGCAT.........2611.001001000000000000000000000000000000000000000000000000000000000000
.......................TTGGCCATGCAAAGGCTCCTCAAC............................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.CGAATGCATTTGGTCCCATGAA....................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ATTTG-TA---CTGATAGATACGCC...........................................2111.001100000000000000000000000000000000000000000000000000000000000000
..........TTGGTCCCATGAGTTGGCCATGCAAAGG.....................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAGAATGCCTGCACAGATAC..................2011.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TACCGAGTGCATTGATGT...1820.501000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................TACCGAGTGCATTGATGTC..19180.112001000000000000000000000000000000000000100000000000000000000000
droMoj3
GCGAATGCATTTGGTCGCATGAATTGGCGATGCAACGGCTTATCAATTTTGTAAGTGGACAG--CT-GA--CTA-------------------------GA-CTATGTAAATGT----ATA----TATGTATATATAATA--TGAGTAATTGTA-T-CA---TTAACAGATACGTCAGAATCAGAATGCCTGCACAGATACCGAGTGCATAGATGGTAASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
........ATTTGGTCGCATGAATTGGC...............................................................................................................................................................................................2019.009400005
.....................................................................................................................................................................................CAGAATGCCTGCACAGATACCGAGTGC...........2715.005500000
...................................................................................................................................................................................ATCAGAATGCCTGCACAGATACCGAGTG............2813.003200001
...................................................................................................................................................................................ATCAGAATGCCTGCACAGATACCGAGT.............2712.002200000
..GAATGCATTTGGTCGCATGAATTGG................................................................................................................................................................................................2512.002200000
..GAATGCATTTGGTCGCATGAATTG.................................................................................................................................................................................................2412.002200000
..GAATGCATTTGGTCGCATGAATTGGC...............................................................................................................................................................................................2612.002200000
...............CGCATGAATTGGCGATGCAACGGCTT..................................................................................................................................................................................2612.002200000
.................CATGAATTGGCGATGCAACGG.....................................................................................................................................................................................2111.001100000
...AATGCATTTGGTCGCATGAATTGGC...............................................................................................................................................................................................2511.001100000
..GAATGCATTTGGTCGCATGAATTGGCGA.............................................................................................................................................................................................2811.001100000
......................ATTGGCGATGCAACGGCTT..................................................................................................................................................................................1911.001100000
......................ATTGGCGATGCAACGGCT...................................................................................................................................................................................1811.001100000
...............CGCATGAATTGGCGATGCAACGGC....................................................................................................................................................................................2411.001100000
............................GATGCAACGGCTTATCAAT............................................................................................................................................................................1911.001100000
.........TTTGGTCGCATGAATTGGC...............................................................................................................................................................................................1911.001100000
.....................AATTGGCGATGCAACGGCTTATCA..............................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................ATGCCTGCACAGATACCGA...............1911.001100000
..................ATGAATTGGCGATGCAACGGC....................................................................................................................................................................................2111.001000001
......GCATTTGGTCGCATGAATTGGC...............................................................................................................................................................................................2211.001100000
..GAATGCATTTGGTCGCATGA.....................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................ATACGTCAGAATCAGAATGCCT............................2211.001000001
................................................................................................................................................................................................CACAGATACCGAGTGCATAGA......2111.001100000
...............CGCATGAATTGGCGATGCAACGG.....................................................................................................................................................................................2311.001100000
......GCATTTGGTCGCATGAATTGGCGATG...........................................................................................................................................................................................2611.001000001
.............................................................................................................................................................................................CTGCACAGATACCGAGTGC...........1911.001000100
..........................GCGATGCAACGGCTTATCA..............................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................CAGAATGCCTGCACAGATACCGAGT.............2511.001100000
..................ATGAATTGGCGATGCAACGGCTTATCA..............................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................CAGAATGCCTGCACAGATACCGAGTG............2611.001100000
..................ATGAATTGGCGATGCAACGGCTTATC...............................................................................................................................................................................2611.001100000
................GCATGAATTGGCGATGCAACGGCTTATC...............................................................................................................................................................................2811.001100000
........ATTTGGTCGCATGAATTGGCG..............................................................................................................................................................................................2111.001100000
......GCATTTGGTCGCATGAATTGGCGAT............................................................................................................................................................................................2511.001000001
......GCATTTGGTCGCATGAATTG.................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................CAGAATCAGAATGCCTGCAC........................2011.001100000
.........................................................................................................................................................................ATACGTCAGAATCAGAATGCCTGC..........................2411.001100000
..................ATGAATTGGCGATGCAACGG.....................................................................................................................................................................................2011.001100000
droGri2
GCGAATGCATTTGGTCCCATGAAATGGCCATGCAAAGGCTTATCAATTTTGTAAGTTTCCT--TCA--------A-TTGTTAGCCACAAC--TATGTGTAA-AGAT------------ATT----T-------------A--TAATCAAA----CTATC---TCAACAGATACGCCAGAATCAGAACGCTTGCTCCGATACTACGTGCATTGATGGTAASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...........................CCATGCAAAGGCTTATCAATTTTA........................................................................................................................................................................2411.00110
.........................................................................................................................................................................ATACGCCAGAATCAGAACGCT.............................2111.00101

Generated: 05/18/2015 at 09:38 AM