ID:

dsi_7960

 Coordinate:

2l:7532819-7532968 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [2l_7533011_7533073_-]; three_prime_UTR [2l_7532134_7532878_-]; CDS [2l_7532879_7533010_-]; exon [2l_7532134_7533010_-]

No Repeatable elements found

Sense Strand Reads

--------##################################################################################################################################################################################################################################################
ACTTTTAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATAACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCGCTCACTAACAAAAATCACATCAAAAACCGGGGACAACCAAAATCAACCATCTTGTGATATATAGTATATATACATATATATATAAATGGGTTCCAAACAT
**************************************************.........(((.((((.......((((.((......)).))))....)))))))..*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
 M023
head
 SRR902009
testis
 M024
male body		 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.............................................................................................................................................................................................AAAGGAACGATCTTGTGATAT........................................ 21 3 1 16.00 16 3 7 6 0 0 0 0 0 0 0 0
................................................................................GATATAACTCAACCACTTCTGCAGAAC............................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGAAAATCTAGCAGCC..................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0
...................................................................................ATAACTCAACCACTTCTGCAGAAC............................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................ATCTAGCAGCCAATCGGGTTCAG......................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................CGCTGCTTCAAAGTAAGAAAA............................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.............................................TCAAAGTAAGAAAATCTAGCAGCCAA................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......GGTTTCTGAGATGTGCGAC................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................AATCACATCAAAAACCGG...................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................TTCACATTCGCTGCTTCAAAG....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................CAAAGTAAGAAAATCTAGCAGCCAAT.................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........TTTCTGAGATGTGCGACCACT............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................ACTTCTGCAGAACAATAACA........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................TCAAAGTAAGAAAATCTAGCAGCCAGTC................................................................................................................................................................................. 28 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................AATCTAGCAGCCAATCGGGTT............................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................GCCAATCGGGTTCAGATATAACTC................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................TTCACATTCGCTGCTTCAAA........................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GGACAACCAAAATCAACCATCTTGTGAT.......................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................GCAGAACAATAACAAAATCAAACC.............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................CAACCAAAATCAACCATCTTGT............................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................TATAACTCAACCACTTCTGCAGAACA.............................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................AAAGGAACGATCTTGTGATA......................................... 20 3 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0
..TTTTAGGTTTGTGAGTTGTGA................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0
.................................................................................ATATAACTCAAGCAC.......................................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0
...TTTAGGTTTCTGTGAT....................................................................................................................................................................................................................................... 16 1 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................AAAGGAACGATCTTGTGAT.......................................... 19 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................AGGGAATCGGGTTCAGA........................................................................................................................................................................ 17 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
....................................TTCTTTGCTTTAAAGTAAGA.................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................GACAAGAACAAGATCAAACC.............................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TGAAAATCCAAAGACTCTACACGCTGGTGAAAGTGTAAGCGACGAAGTTTCATTCTTTTAGATCGTCGGTTAGCCCAAGTCTATATTGAGTTGGTGAAGACGTCTTGTTATTGTTTTAGTTTGGCAACTTTTCGGTAACTTTGATTTAGCGAGTGATTGTTTTTAGTGTAGTTTTTGGCCCCTGTTGGTTTTAGTTGGTAGAACACTATATATCATATATATGTATATATATATTTACCCAAGGTTTGTA
***********************************************************************************************************************************************.........(((.((((.......((((.((......)).))))....)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.......................................................................AGCCCAAGTCTATATTGAGTT.............................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0
.............ACTCTACACGCTGGTGAAAGT........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................GGTCGGTTAGCCCAAGTCTAT...................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................GCCCAAGTCTATATTGAGTTG............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................TTCATTCTTTTAGATCGTCGGTTAGCCCA............................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................................AGCTGGTAGAACACTATATATTC................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................CGTCGGTTAGCCCAAGTCTAT...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................TGTGTTTGGTTTAGTTTTTGGCC...................................................................... 23 3 5 0.20 1 0 0 0 0 0 0 0 1
.............................................................ATCGTCCGTTAGCCC.............................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 0 0 1 0 0
.................................................................................................................................TTTCTGCAACTTTCATTTAGC.................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 1 0
..................................GTAAGCGTCTAAGTTTCA...................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 1 0
.................................................................TCCGTTAGGCAAAGTCTAT...................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 2 0 0
.............................................................................................................AGTGTTTTAGTTTGG.............................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................TAGCACACTATAGATC.................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:7532769-7533018 - dsi_7960 ACT-TT-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------
droSec2 scaffold_3:3301169-3301418 - CCT-TC-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------
dm3 chr2L:7786790-7787039 - TCT-TT-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------
droEre2 scaffold_4929:16707807-16708051 - ATT--T-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAAATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATAT------ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------
droYak3 2L:5114301-5114553 + ATT-TG-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAATAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A-----------AAACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACATATATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------
droEug1 scf7180000409463:963611-963872 + CTT-TT-----TAGGTCTCTGAGATGTGCGATCACTTCCACATTCGTTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGACATA---ACTCAACAACTTCTACAGAACAATAACAAA------ACGTTGAAAAGTCATTGAAACTAAATCG--------C-CAACTAACCA--------AAAT-------------------CACAT---CAAA-----------CAAAACAAAAAAAAAACGGG-------------------------------------------------GAACAACCAAA--AATC--------------AACCATCT----TGTGATATATAGTA----TATATACATATATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------
droBia1 scf7180000302422:9525407-9525649 - ATT-TT-----TAGGTATCGGAGATGTGCGACCACTTCCAGATTCGCTGCTTCAAAGTAAGAAAATCTAGTAGCCAATCGGGCTCAGATCCA---ACTCAAAAACTTCTACAGAACAATAACAAAATCAAAACGTTGAAAAGCCATTGAA-----ATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------A-------------AACGGG-------------------------------------------------G-ACAAGCAA---AATC--------------AACCATCT----TGTGATATAAAGTA----TATATA----TATACATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------
droTak1 scf7180000415702:633298-633548 + TTT-TT-----CAGGTATCGGAGATGTGCGACCACTTCAACATTCGCTGCTTCAAAGTAAGACAATCTAGCGGCCAATCGGTCTCAGATTCA---ACTCAACCACTTCTACAGAACAATAACAAATTCAAAACGTTGAAAAGCCATTGAA-----ATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CAAA-----------CA----------AAAACGGG-------------------------------------------------G-ACAACCAAA--AATC--------------AACCATCT----TGTGATATAAAGTA----TATATATAT---TATATATAAATGGGT-----TCCAAAAA-----------ACAT-----------------------------------------
droEle1 scf7180000491028:1238761-1239015 + ATT-TT-----TAGGTCTCTGAGATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAACCTGGTTCAGATTTA---ACTCAACAACTTCTACAAAATGATAATAACATCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CAATCA---------A-----------AAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTT--AATATATAC----ATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------
droRho1 scf7180000780001:15670-15917 - ATT-TT-----TAGGTCTCTGAGATGTGCGACCACTTTAAAATTCGGTGCTTCAAAGTAAGAAAATCTAGCAGCCAACCTGGTTCAGATTTA---ACTCAACAACTTCTACAGAATGATAACAAAATCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------T-----------CAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTT----TATAT------ATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------
droFic1 scf7180000454115:580608-580856 - ATT-TT-----TAGGTGTCCGAGATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGATGCAGATTTA---ACTCAACAGCTTCTCCAGAATAATAACAAAACCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------A-----------CAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TAT-T--A--TATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------
droKik1 scf7180000302570:270405-270687 + ATT-TG-----CAGGTCTCTGAGATGTGCGATCACTTCCACATTCGCTGCTTCAAAGTAAGATCGACTGGCAGCCAATCGGGCTCCGATTTA---ACTCAACAACTTCTACAGAACAATAACAAAATCAAACCGTTGAAAACCCATTGAAACTAAAACGAAATCACAC-CAACTAACATC------AAAAT-------------------CACAT---TC---AAAAAACAAAC-----------AAAACGGG-------------------------------------------------G-ACAACCAA---AATCTAAATCAAAATCAAAACCATCT----TGTGATATATAGTAGAAATAT--ATA--TATATATATAAATGGGT-----TCCAA--A--------------------------------------------------------
droAna3 scaffold_12943:1519848-1520092 + dan_920 CCGTTT-----CAGGTTTCGGAAATGTGCGACCACTTCCACATTCGTTGCTTCAAAGTAAGACAGTCTAGTAGCCAAGCGGGCTCAGATTTA---ACTCACCAACTTCTGCAGAATAATAACAAAGTCAAACCCCAAAAAAGTCATTCCAACTAAATCG--------C-CCACTAACCC--------AAAC-------------------CACAT---CA---A---------C-----------AAATCGGG-------------------------------------------------G-ACTACAAA---AACC--------------AACCATCT----TGTGATATATAGTA----T----------ATATATAGAAATGGGT-----TCCAA--T-----------ACAT-----------------------------------------
droBip1 scf7180000396728:1682208-1682450 - --T-TA-----TAGGTTTCTGAAATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGACCGTCTAGTAGCCCAACCGGCTCAGACTTA---ACTCAACATCTTCTACAGAATAATAACAAAGTCAAACTCCCAAAAAGTCATTCAAACTAAATCG--------CCTAACTAACCC--------AAAC-------------------CACAT---CA---A---------C-----------AAATCGGG-------------------------------------------------G-ACTACAAA---AATC--------------AACCATCT----TGTGATATATAGTA----T----------ATATATAGAAATGGGT-----TCCAA--C-----------ACAT-----------------------------------------
dp5 4_group3:1673413-1673679 - CCT-TC-----TAGGTCTCTGAAATGTGCAATCACTTCCATATCAGATGCTTCAAAGTAAGACAAACTCGCAGCCAAACGG---CAGATCCACAATCACAACAATCCCTGCAGAATAATAACAAAATCA---------AGGGCCATTGAAACTAATTCG--------C-TCACTAACACC-----------CCCGCCCCCAA--AGAAACA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------C-ACAAACAAATCAACC--------------AACCATCT----TGTGATATATA-------TAT--------ATATATTTATATGGGGATCGATCCGA--AAAAACAAAAAAACAT-----------------------------------------
droPer2 scaffold_1:3144563-3144831 - CCT-TC-----TAGGTCTCTGAAATGTGCAATCACTTCCATATCAGATGCTTCAAAGTAAGACAAACTCGCAGCCAAATGG---CAGATCCACAATCACAACAATCCCTGCAGAATAATAACAAAATCA---------AGGGCCATTGAAACTAATTCG--------C-TCACTAACACC-----------CCCGCTCCCAA--AGAAACA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------C-ACAAACAAATCAACC--------------AACCATCT----TGTGATATATA-------TATAT------ATATATTTATATGGGGATCGATCCGA--AAAAACAAAAAAACAT-----------------------------------------
droWil2 scf2_1100000004521:5744760-5745014 + ACT-TTATTGACAGGTGTCCGAAATGTGCAATCATTTTCATATTAAATGCTTCAAAGTAAGAACACCAAGTAGCCAAACGG---CAGAGTTA------------CTACAACAAAATAATAACAAAT---------TCAAAAGCCATTGAAA-----GAG--------C-TAAAAAAAAACAACAACAAAAC-------------------A---TTATTA---A---------A------------AAAAGAA-------------------------------------------A-A---G-AAAACT-----AACT--------------AACAATTT----TGTGATACACATT--------------------------ATGGGA---------A--A-----------ACATTAATAACTCTTACCTCGCCACACCCACCCACCCACCACCAT
droVir3 scaffold_12963:6586732-6586986 + dvi_10689 AAT-TG-----CAGGTCTCGGAAATGTGTAATCATTTTAAGATTCGTTGCTTCAAAGTAAGAAAATCCCACAGCAATTCCGTTGA----------ATACA-CTAC-ATTCCAGAACAATAACAAA------TCCCAGAAAAGTCATTGAAACTAA-TTA--------C-ATACTAACTAG------AAAAA-------------------AAAAA---CA-------------------------AAAACAAAAACAATCAAAACAAAACAAATTCAACGAAATACGAAAATACC-----------AAAA-----GGGT--------------TGCCATTTTGTATGTGATATAA---------------------------ATGTGGGT-----GTTAC--------------AAAA-----------------------------------------
droMoj3 scaffold_6500:25743104-25743346 + TCT-AT-CCAATAGGTCTCGGAAATGTGTGACCACTTCAAGATTCGTTGCTTCAAAGTAAGAAAATATGACAGCAATTTCGTTGAACATA---------------CATTCCAGAAGAATAACAAA------TTCCTGAAAAGTCATTGAAACTAATTAC--------A-TAACTAACTT--------CAACAA-----------AGAA--CAAAT-TTCA---A---------C-----------AAAAAG---------------------------------ATTAAGCAACCGATTGGTT-GCAAAT-----GGTT--------------GGCCATTTTGTATGTGATATAA---------------------ATGT-----TGGGT-----GTTAC--------------AAAA-----------------------------------------
droGri2 scaffold_15252:9801180-9801423 + TCT-CT-CCAATAGGTCTCGGAAATGTGTAATCATTTTAATATCAGTTGCTTCAAAGTAAGAAAATCTCGCAGCAATA-----------------------CCAC-ATTCCAGAAAAATAACAAA------TCGTTGAAAAGCCATTGAAACTAA-TTA--------C-ATACTAACTA--------CAACCAAGAAACCAACCAGAACCA---AAATCA---A---------C-----------GAAATA---------------------------------ATCAAAAAACCAA---------AAAG-----GGGT--------------GTCCATTTGCTATGTGATATAT---------------------ATAT---TGTGGGT-----GTTACAAA--------ATTCCCT-----------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACT-TT-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................GATATA---ACTCAACCACTTCTGCAGAAC.......................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
........................................................GTAAGAAAATCTAGCAGCC................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000000000
.........................................................................................ATA---ACTCAACCACTTCTGCAGAAC.......................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
................................................................ATCTAGCAGCCAATCGGGTTCAG....................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................CGCTGCTTCAAAGTAAGAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...................................................TCAAAGTAAGAAAATCTAGCAGCCAA..............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
.............GGTTTCTGAGATGTGCGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
............................................................................................................................................................................................AAT-------------------CACAT---CA---A---------A------------AACCGG...............................................................................................................................................................................................................1811.00100010000000000000
....................................TTCACATTCGCTGCTTCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................................CAAAGTAAGAAAATCTAGCAGCCAAT.............................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...............TTTCTGAGATGTGCGACCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................ACTTCTGCAGAACAATAACA................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...............................................................AATCTAGCAGCCAATCGGGTT.......................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
........................................................................GCCAATCGGGTTCAGATATA---ACTC........................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
....................................TTCACATTCGCTGCTTCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
............................................................................................................................................................................................................................................................G-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGAT............................................................................................................2811.00100010000000000000
.............................................................................................................GCAGAACAATAACAAAATCAAACC......................................................................................................................................................................................................................................................................................................................................2411.00100000100000000000
.................................................................................................................................................................................................................................................................................................................CAACCAA---AATC--------------AACCATCT----TGT...............................................................................................................2211.00100010000000000000
........................................................................................TATA---ACTCAACCACTTCTGCAGAACA......................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
droSec2
CCT-TC-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................TGAAAAGCCATTGAAACTAAAT..............................................................................................................................................................................................................................................................................................................2211.0010010
.............................GACCACTTTCACATTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................................................................ATC--------------AACCATCT----TGTGATATATAGT.....................................................................................................2411.0010010
.....................................................................................................................................................AACTAAATCG--------C-TCACTAAC..........................................................................................................................................................................................................................................................................................1911.0010010
.........................................ATTCGCTGCTTCAAAGTAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................................................................................................................................................AACCAA---AATC--------------AACCATCT----TG................................................................................................................2011.0011000
..................................................................................................................................................................................................................................................................................................................AACCAA---AATC--------------AACCATCT----TGT...............................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................................................CAACCAA---AATC--------------AACCATCT----T.................................................................................................................2011.0010010
dm3
TCT-TT-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACAT--ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................TCTAGCAGCCAATCGGGTTCAGATA.................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................A---ACTCAACCACTTCTGCAGAAC.......................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ACTTCTGCAGAACAATAAC.................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AACAATAACAAAATCAAACCGTTGT.................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TA---ACTCAACCACTTCTGCAGAAC.......................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCTGAGATGTGCGACCACTTTCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------.....................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACAATAACAAAATCAAACCGTTGA.................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GACCACTTTCACATTCGCTGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTCTGAGATGTGCGACCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.................TCTGAGATGTGCGACCACTTTCACATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCAAAGTAAGAAAATCTAGCAGCCAA..............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TAAGAAAATCTAGCAGCCAATCGGGT........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TATA---ACTCAACCACTTCTGCAGAACAA.....................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCAGCCAATCGGGTTCAGAT..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAA---AATC--------------AACCATCT----TGTGATATA.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TCGGGTTCAGATATA---ACTCAACCACTTC...............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACA.....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AA..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGAAAATCTAGCAGCCAATCG...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GAAAATCTAGCAGCCAATCGGGTTCAG....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................T---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------A.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TTGAAACTAAATCG--------C-TCACTAACAA--------A...............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAACCACTTCTGCAGAACAATAACAA...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ACCACTTCTGCAGAACAATAACAAAAT............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTCTGAGATGTGCGACCACTTTCACT.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CTTCTGCAGAACAATAACAAAATCAAA........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGCAGAACAATAACAAAATCAAACCGT....................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................TTCTGAGATGTGCGACCACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACCGTTGAAAAGCCATTGAAACTAAA...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCTAGCAGCCAATCGGGTTCAGA...................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATCGGGTTCAGATATA---ACTCAACC....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GCCAATCGGGTTCAGATATA---ACTCAACC....................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TCGGGTTCAGATATA---ACTCAACCACT.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TATACAT--ATATATATAAATGG.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAA---AATC--------------AACCATCT----TGTGAT............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GCCATTGAAACTAAATCG--------C-TCACTAAC..........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TC--------------AACCATCT----TGTGATATATAGTA----TA..............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACCACTTTCACATTCGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................T-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACC.....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACCACTTTCACATTCGCTGCTTCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ACTTCTGCAGAACAATAACAAAAT............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCAACCACTTCTGCAGAACAATAACA................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AACAAAATCAAACCGTTGA.................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................TATA---ACTCAACCACTTCTGCAGAACAAT....................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCACTTTCACATTCGCTGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AA..............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GAAAATCTAGCAGCCAATCGGGTTCAGA...................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................TAGCAGCCAATCGGGTTCAGATATA---AC..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CT-TT-----TAGGTTTCTGAGATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................CATTGAAACTAAATCG--------C-TCACTAACAA--------................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCACTTTCACATTCGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ACAT--ATATATATAAATGGGT-----TCC.............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTCTGCAGAACAATAACAAAAT............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................G-ACAACCAA---AATC--------------AACCATCT----TGTGA.............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CAATCGGGTTCAGATATA---A...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCGACCACTTTCACATTCGCTGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GCCAATCGGGTTCAGATATA---ACTCAAC.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ATCT----TGTGATATATAGTA----TT..............................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATT--T-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAAATATA---ACTCAACCACTTCTGCAGAACAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A------------AACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATAT------ATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................AA--------AAAT-------------------CACAT---CA---A---------A------------AACCGG...............................................................................................................................................................................................................2111.0011000000
.............................................................................................................................ATCAAACCGTTGAAAAGCCATTGA......................................................................................................................................................................................................................................................................................................................2411.0010000100
.................................................................................................................AACAATAACAAAATCAAACCGT....................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
ATT-TG-----TAGGTTTCTGAGATGTGCGACCACTTTCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGATATA---ACTCAACCACTTCTGCAGAATAATAACAAAATCAAACCGTTGAAAAGCCATTGAAACTAAATCG--------C-TCACTAACAA--------AAAT-------------------CACAT---CA---A---------A-----------AAACCGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TATATACATATATATATATAAATGGGT-----TCCAA--------------ACAT-----------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................TTCAAAGTAAGAAAATCTAGCAGCC................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000000000
........................................................GTAAGAAAATCTAGCAGCC................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
........................................................................GCCAATCGGGTTCAGATATA---ACT.........................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
CTT-TT-----TAGGTCTCTGAGATGTGCGATCACTTCCACATTCGTTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGGTTCAGACATA---ACTCAACAACTTCTACAGAACAATAACAAA------ACGTTGAAAAGTCATTGAAACTAAATCG--------C-CAACTAACCA--------AAAT-------------------CACAT---CAAA-----------CAAAACAAAAAAAAAACGGG-------------------------------------------------GAACAACCAAA--AATC--------------AACCATCT----TGTGATATATAGTA----TATATACATATATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATT-TT-----TAGGTATCGGAGATGTGCGACCACTTCCAGATTCGCTGCTTCAAAGTAAGAAAATCTAGTAGCCAATCGGGCTCAGATCCA---ACTCAAAAACTTCTACAGAACAATAACAAAATCAAAACGTTGAAAAGCCATTGAA-----ATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------A-------------AACGGG-------------------------------------------------G-ACAAGCAA---AATC--------------AACCATCT----TGTGATATAAAGTA----TATATA----TATACATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTT-TT-----CAGGTATCGGAGATGTGCGACCACTTCAACATTCGCTGCTTCAAAGTAAGACAATCTAGCGGCCAATCGGTCTCAGATTCA---ACTCAACCACTTCTACAGAACAATAACAAATTCAAAACGTTGAAAAGCCATTGAA-----ATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CAAA-----------CA----------AAAACGGG-------------------------------------------------G-ACAACCAAA--AATC--------------AACCATCT----TGTGATATAAAGTA----TATATATAT---TATATATAAATGGGT-----TCCAAAAA-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATT-TT-----TAGGTCTCTGAGATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAACCTGGTTCAGATTTA---ACTCAACAACTTCTACAAAATGATAATAACATCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CAATCA---------A-----------AAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTT--AATATATAC----ATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATT-TT-----TAGGTCTCTGAGATGTGCGACCACTTTAAAATTCGGTGCTTCAAAGTAAGAAAATCTAGCAGCCAACCTGGTTCAGATTTA---ACTCAACAACTTCTACAGAATGATAACAAAATCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------T-----------CAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTT----TATAT------ATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATT-TT-----TAGGTGTCCGAGATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGAAAATCTAGCAGCCAATCGGATGCAGATTTA---ACTCAACAGCTTCTCCAGAATAATAACAAAACCAAAACGTTGAAAAGCCATTGAAACTAAATCG--------C-CCACTAACCA--------AAAT-------------------CACAT---CA---A---------A-----------CAAACGGG-------------------------------------------------G-ACAACCAA---AATC--------------AACCATCT----TGTGATATATAGTA----TAT-T--A--TATATATATAAATGGGT-----TCCAA--A-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATT-TG-----CAGGTCTCTGAGATGTGCGATCACTTCCACATTCGCTGCTTCAAAGTAAGATCGACTGGCAGCCAATCGGGCTCCGATTTA---ACTCAACAACTTCTACAGAACAATAACAAAATCAAACCGTTGAAAACCCATTGAAACTAAAACGAAATCACAC-CAACTAACATC------AAAAT-------------------CACAT---TC---AAAAAACAAAC-----------AAAACGGG-------------------------------------------------G-ACAACCAA---AATCTAAATCAAAATCAAAACCATCT----TGTGATATATAGTAGAAATAT--ATA--TATATATATAAATGGGT-----TCCAA--A--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CCGTTT-----CAGGTTTCGGAAATGTGCGACCACTTCCACATTCGTTGCTTCAAAGTAAGACAGTCTAGTAGCCAAGCGGGCTCAGATTTA---ACTCACCAACTTCTGCAGAATAATAACAAAGTCAAACCCCAAAAAAGTCATTCCAACTAAATCG--------C-CCACTAACCC--------AAAC-------------------CACAT---CA---A---------C-----------AAATCGGG-------------------------------------------------G-ACTACAAA---AACC--------------AACCATCT----TGTGATATATAGTA----T----------ATATATAGAAATGGGT-----TCCAA--T-----------ACAT-----------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................AGTAAGACAGTCTAGTAGC.................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droBip1
--T-TA-----TAGGTTTCTGAAATGTGCGACCACTTCCACATTCGCTGCTTCAAAGTAAGACCGTCTAGTAGCCCAACCGGCTCAGACTTA---ACTCAACATCTTCTACAGAATAATAACAAAGTCAAACTCCCAAAAAGTCATTCAAACTAAATCG--------CCTAACTAACCC--------AAAC-------------------CACAT---CA---A---------C-----------AAATCGGG-------------------------------------------------G-ACTACAAA---AATC--------------AACCATCT----TGTGATATATAGTA----T----------ATATATAGAAATGGGT-----TCCAA--C-----------ACAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CCT-TC-----TAGGTCTCTGAAATGTGCAATCACTTCCATATCAGATGCTTCAAAGTAAGACAAACTCGCAGCCAAACGG---CAGATCCACAATCACAACAATCCCTGCAGAATAATAACAAAATCA---------AGGGCCATTGAAACTAATTCG--------C-TCACTAACACC-----------CCCGCCCCCAA--AGAAACA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------C-ACAAACAAATCAACC--------------AACCATCT----TGTGATATATA-------TAT--------ATATATTTATATGGGGATCGATCCGA--AAAAACAAAAAAACAT-----------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................CA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------C-AC.........................................................................................................................................................2111.0010100000000
...............................................................................................................................................CATTGAAACTAATTCG--------C-TCAC..............................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................GCAGAATAATAACAAAATCA---------AGGGC............................................................................................................................................................................................................................................................................................................................2511.0010000100000
..............................................................................................................................TCA---------AGGGCCATTGAAACTA.................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................AAACA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------.............................................................................................................................................................2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................ATATATTTATATGGGGATCGATCCGA--AA.......................................................2811.0010010000000
droPer2
CCT-TC-----TAGGTCTCTGAAATGTGCAATCACTTCCATATCAGATGCTTCAAAGTAAGACAAACTCGCAGCCAAATGG---CAGATCCACAATCACAACAATCCCTGCAGAATAATAACAAAATCA---------AGGGCCATTGAAACTAATTCG--------C-TCACTAACACC-----------CCCGCTCCCAA--AGAAACA---TCATCA---A---------C-----------GACAAGGC-------------------------------------------------C-ACAAACAAATCAACC--------------AACCATCT----TGTGATATATA-------TATAT------ATATATTTATATGGGGATCGATCCGA--AAAAACAAAAAAACAT-----------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................AATAACAAAATCA---------AGGGCC...........................................................................................................................................................................................................................................................................................................................1915.005500000
...............................................................................................................AGAATAATAACAAAATCA---------AGGGC............................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................CCACAATCACAACAATCCCTGCAGA.........................................................................................................................................................................................................................................................................................................................................................2511.001001000
droWil2
ACT-TTATTGACAGGTGTCCGAAATGTGCAATCATTTTCATATTAAATGCTTCAAAGTAAGAACACCAAGTAGCCAAACGG---CAGAGTTA------------CTACAACAAAATAATAACAAAT---------TCAAAAGCCATTGAAA-----GAG--------C-TAAAAAAAAACAACAACAAAAC-------------------A---TTATTA---A---------A------------AAAAGAA-------------------------------------------A-A---G-AAAACT-----AACT--------------AACAATTT----TGTGATACACATT--------------------------ATGGGA---------A--A-----------ACATTAATAACTCTTACCTCGCCACACCCACCCACCCACCACCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................AGAGTTA------------CTACAACAAAATAATAAC.................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................................................................................................................................................................................................................................................................TGATACACATT--------------------------ATGGGA---------A--A-----------ACATTAAT.....................................2711.00100010
.......................................................................................................................................TCAAAAGCCATTGAAA-----GAG--------C-..................................................................................................................................................................................................................................................................................................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................CATT--------------------------ATGGGA---------A--A-----------ACATTAAT.....................................2011.00100100
droVir3
AAT-TG-----CAGGTCTCGGAAATGTGTAATCATTTTAAGATTCGTTGCTTCAAAGTAAGAAAATCCCACAGCAATTCCGTTGA----------ATACA-CTAC-ATTCCAGAACAATAACAAA------TCCCAGAAAAGTCATTGAAACTAA-TTA--------C-ATACTAACTAG------AAAAA-------------------AAAAA---CA-------------------------AAAACAAAAACAATCAAAACAAAACAAATTCAACGAAATACGAAAATACC-----------AAAA-----GGGT--------------TGCCATTTTGTATGTGATATAA---------------------------ATGTGGGT-----GTTAC--------------AAAA-----------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................A----------ATACA-CTAC-ATTCCAGAACA......................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATAACAAA------TCCCAGAAAAGTCATTGA......................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................AATCATTTTAAGATTCGTTGCTTCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TCT-AT-CCAATAGGTCTCGGAAATGTGTGACCACTTCAAGATTCGTTGCTTCAAAGTAAGAAAATATGACAGCAATTTCGTTGAACATA---------------CATTCCAGAAGAATAACAAA------TTCCTGAAAAGTCATTGAAACTAATTAC--------A-TAACTAACTT--------CAACAA-----------AGAA--CAAAT-TTCA---A---------C-----------AAAAAG---------------------------------ATTAAGCAACCGATTGGTT-GCAAAT-----GGTT--------------GGCCATTTTGTATGTGATATAA---------------------ATGT-----TGGGT-----GTTAC--------------AAAA-----------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................T-TTCA---A---------C-----------AAAAAG---------------------------------ATTAAGCAAC.....................................................................................................................................................................2311.001100000
...............TCTCGGAAATGTGTGACCACTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................GTGACCACTTCAAGATTCGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
................CTCGGAAATGTGTGACCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................GACCACTTCAAGATTCGTTGCTTCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
TCT-CT-CCAATAGGTCTCGGAAATGTGTAATCATTTTAATATCAGTTGCTTCAAAGTAAGAAAATCTCGCAGCAATA-----------------------CCAC-ATTCCAGAAAAATAACAAA------TCGTTGAAAAGCCATTGAAACTAA-TTA--------C-ATACTAACTA--------CAACCAAGAAACCAACCAGAACCA---AAATCA---A---------C-----------GAAATA---------------------------------ATCAAAAAACCAA---------AAAG-----GGGT--------------GTCCATTTGCTATGTGATATAT---------------------ATAT---TGTGGGT-----GTTACAAA--------ATTCCCT-----------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:42 AM