ID:dsi_7935 |
Coordinate:3r:10753406-10753555 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
Antisense to intron [3r_10749675_10754641_+]
No Repeatable elements found
|
AAGACCGCCAAAGGATACTCGGACTATAGGAATATCTATTTTATACGGGGGTAAGTAAGCGAAACCGGTCTGCATTCCTGTCCTGGCATGCGACTATTCTTCGTTAAAGGGGGAAAGTTAGGAGGTTTCCTTGCAAGCAGTTGTTGGGGGTGAACAAACAAAATACTTCACTGAAAGAAAGAGCTCAAAGATGGTACCAGAGTTTATATACCCTTTATTGTACCAAGATATAAGCCCTTTTTAAAGATCT
**************************************************....(((((.((((((((((.((((.((......)).)))))))).((((((......)))))).........))))))))))).(((..((......((((((............))))))......))..)))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
O001 Testis |
M025 embryo |
|---|---|---|---|---|---|---|---|---|
| ..................................TCTATTTTATACGGGGGTAAGTAAGCGA............................................................................................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................................................................................................................................................................TATTGTACCAAGATATAA................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ................................................................................................................................CCTTCCAAGCAGTTGT.......................................................................................................... | 16 | 1 | 12 | 0.08 | 1 | 1 | 0 | 0 |
| ............................................................................................ATTATTCTTCGTTAAATG............................................................................................................................................ | 18 | 2 | 18 | 0.06 | 1 | 0 | 0 | 1 |
|
TTCTGGCGGTTTCCTATGAGCCTGATATCCTTATAGATAAAATATGCCCCCATTCATTCGCTTTGGCCAGACGTAAGGACAGGACCGTACGCTGATAAGAAGCAATTTCCCCCTTTCAATCCTCCAAAGGAACGTTCGTCAACAACCCCCACTTGTTTGTTTTATGAAGTGACTTTCTTTCTCGAGTTTCTACCATGGTCTCAAATATATGGGAAATAACATGGTTCTATATTCGGGAAAAATTTCTAGA
**************************************************....(((((.((((((((((.((((.((......)).)))))))).((((((......)))))).........))))))))))).(((..((......((((((............))))))......))..)))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR902008 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
M025 embryo |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............CTAGCAGCCTGACATCCTTA......................................................................................................................................................................................................................... | 20 | 3 | 7 | 1.43 | 10 | 6 | 0 | 4 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................TAACCCCCACTTGTTAGGTTT....................................................................................... | 21 | 3 | 2 | 1.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| ............................................................CTTTGGCCAGACGTAAGGACA......................................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............CTAGCAGCCTGATATC............................................................................................................................................................................................................................. | 16 | 2 | 15 | 0.33 | 5 | 1 | 1 | 0 | 3 | 0 | 0 | 0 |
| .............CTAGGAGCCTGACATCCT........................................................................................................................................................................................................................... | 18 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........TTGCTAGCAGCCTGATATC............................................................................................................................................................................................................................. | 19 | 3 | 12 | 0.17 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................AGTGACTATCCTTCTCG.................................................................. | 17 | 2 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................CCCACTTGTTTGTTCTG...................................................................................... | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............TAGCAGCCTGACATCCTTA......................................................................................................................................................................................................................... | 19 | 3 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................CTTGTTTGTTTTAAGA................................................................................... | 16 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...TGGCGTTGTCCTATCAGC..................................................................................................................................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .............CTAGCAGCCTGATATCGT........................................................................................................................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................CCCACGTGTCAGTTTTATG.................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:48 AM