ID:

dsi_7934

 Coordinate:

3l:23704171-23704320 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.5 -3.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. 2r:887709-887726 +
  2. 3l:23092923-23092940 +
  3. dsi_7934  3l:23704185-23704202 -
star
  1. 2r:887679-887700 +
  2. 3l:23092893-23092914 +
  3. dsi_7934  3l:23704211-23704232 -

Sense Strand Reads

GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTATGTATAATTAAATATATTAAATATATAGTTTAGTGTGGTCTTGGTAAAGATTGTATATGTTTCGCTTATATTCTTTGTTCAGTCCTGTTAAAACGATTGTAGTCAGTAGTCGATGATGCGCAGCTCTAGGATGTACGGTGGCCAGTACTATATATGTACATACAAACGAAGAAATACATACCAATTTGCTTTGGATG
******************************************************************************************************************************************.........((((((.((((........))))..)))).)).......**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
........................................................................................................................................................................ATGCGCAGCTCTAGGATG................................................................ 18 0 3 6.00 18 17 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................AGTCAGTAGTCGATGATG............................................................................... 18 0 3 2.67 8 7 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................GATGCGCAGCTCTAGGATG................................................................ 19 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCGATGATGCGCAGCTCTAGGATG................................................................ 25 0 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................TGTTAAAACGATTGTAGTCAGT.......................................................................................... 22 0 3 0.67 2 0 0 0 1 0 1 0 0 0 0 0
..ACTTAAATGGCGGACGAC...................................................................................................................................................................................................................................... 18 0 3 0.67 2 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................AAAACGATTGTAGTCGGTAA........................................................................................ 20 2 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACGATTGAAGTCAGT.......................................................................................... 17 1 6 0.67 4 0 0 1 0 2 0 0 0 0 1 0
.................................................................................................................................................ACGATTGAAGTCAGT.......................................................................................... 15 1 11 0.36 4 0 0 0 0 4 0 0 0 0 0 0
.....TAAATGGCGGACGACTTGCATAATTAA.......................................................................................................................................................................................................................... 27 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
.....TAAATGGCGGACGACTTGCATAATGAT.......................................................................................................................................................................................................................... 27 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
....TTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................TTTAGTGGGGTCTTGGTCAAGA................................................................................................................................................... 22 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TTTAGTGTGGTCTTGGTAAA..................................................................................................................................................... 20 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
......AAATGGCGGACGACTTGC.................................................................................................................................................................................................................................. 18 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATGCGCAGCTCTAGGATGTACG............................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GCCAGTACTATATATGTACAT.................................... 21 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................TTGGTAAAGATTGTATATGT......................................................................................................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...........GCGGACGACTTGCATAATTAT.......................................................................................................................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...CTTAAATGGCGGACGACTTGCAT................................................................................................................................................................................................................................ 23 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...........GCGGACGACTTGCATAATTA........................................................................................................................................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
............CGGACGACTTGCATAATTA........................................................................................................................................................................................................................... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GATTGTAGTCATTAGTCGATGATG............................................................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................GCCAGTACTATATATGTACA..................................... 20 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
............................................CAACAAGTATGTATA............................................................................................................................................................................................... 15 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.TACTTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................GTTAAAACGATTGTAGTCAGT.......................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCTAGGATGTACGGTGGCCAGTA.................................................. 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.TACTTAAATGGCGGACGA....................................................................................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................TTTAGTGTGGTCTTGGTCAAGAAC................................................................................................................................................. 24 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
GTACTTAAATGGCGGACGACTTGC.................................................................................................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TTCAGTCCTGTTAAAACGATT................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AGCTCTAGGATGTACGGT.......................................................... 18 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
GTACTTAAATGGCGGACG........................................................................................................................................................................................................................................ 18 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................AACGATTGAAGTCAGT.......................................................................................... 16 1 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0
...............................................................................................................................................AAACGATTGAAGTCAGTCGT....................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0
....................................TAGAATCGCAACAAGTATGGAT................................................................................................................................................................................................ 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................TTGTTCAGTGCTGTTAAATCT...................................................................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................AACTCTAAGATGTACGGT.......................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GAAACGATTGAAGTCAGT.......................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................TTAGTGAGGTCTTGG......................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................AACGATTGAAGTCAG........................................................................................... 15 1 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................GGAAACGATTGAAGTCAGT.......................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..........GGCGGACTACTTGCGTAC.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................GAAACGATTGAAGTCAG........................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CATGAATTTACCGCCTGCTGAACGTATTAATATTCGATGTTAACGTTGTTCATACATATTAATTTATATAATTTATATATCAAATCACACCAGAACCATTTCTAACATATACAAAGCGAATATAAGAAACAAGTCAGGACAATTTTGCTAACATCAGTCATCAGCTACTACGCGTCGAGATCCTACATGCCACCGGTCATGATATATACATGTATGTTTGCTTCTTTATGTATGGTTAAACGAAACCTAC
****************************************************************.........((((((.((((........))))..)))).)).......****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
..............................................................................................................................................................................TCGAGATCCTACATGCCA.......................................................... 18 0 3 0.67 2 0 0 2 0 0 0 0
.................................................................................................................................CAAGTCAGGACAATTTTGCTAACAT................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................GGACAATTTTGCTAACATCAGTCATC........................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................................................................GTCGAGGTCCTACATGCCAC......................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0
..........CCGCCTGCTGAACGTATTAAT........................................................................................................................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0
.........................................................................................................................................................TCAGTCATCAGCTACTACGCGTCGAG....................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................................TAACATCAGTCATCAGCTACTACGCGT........................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................GACAATTTTGCTAACATCAGTCATC........................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAGATCCTACATGCCACCGGTCATGAT............................................... 28 0 3 0.33 1 0 0 0 0 1 0 0
........................................................................................................ACATATACAAAGTGAATATAAGAAACAAGT.................................................................................................................... 30 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................TACGCGTCGAGATCCTACGT.............................................................. 20 1 3 0.33 1 0 0 0 0 0 1 0
......................................................................................................................................CAGGACAATTTTGCTAACATCAGTCATC........................................................................................ 28 0 3 0.33 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................CCAACGGTCACGATATTTACA........................................ 21 3 5 0.20 1 0 0 0 0 0 0 1
...........................................................................................................................AAAAAAGAAGTCAGGACCATT.......................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:23704121-23704370 - dsi_7934 GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTATGTATAATTAAATATATTAAATATATA-----------------------------------------------------------------------------------GTTTAGTGTGGTCTTGGTAAAGATTGTATATGTTTCGCTTATATTCT----------------TTGTTCAGTCCTGTTAAAACGATTGTAGTCAGTAGTCGATGATGCGCAGCTCTAGGATGTACGGTGGCCAGTACTATA------TATGTACATAC------AAACGAAGAAATACATACCAATTTGCTTTGGATG
droSec2 scaffold_51:156673-156922 + GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTGTGTATAATTAAATATATAAAATATATG-----------------------------------------------------------------------------------GTTTATTGTGGTCTTGGTAAAGATTGTATATTTTTCGCTTATATTCT----------------TTGTTCAGTCCTGTTAAAACGATAGTAGTCAGTAGTCGATGATGCGCAGCTGGAGGATGTACGGTGGCCAGTACTATA------TATGTACATTC------AAACGAAGAAATACATACCAATTTGCTTTGGATG
dm3 chr3L:23708217-23708479 + GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTGTGTATAATTAATTAAATAAAGTATATA-----------------------------------------------------------------------------------TTTTGGTGTGGTCTTGGTCAAGATTGTATATGTTTCGCTTATATTCTTTAA-GTAAAGACATTTTGTTCAGTCCT-TTAAAATAATAGTAGTCAGTAGTCGATGAAGCGCAACTGGAGGA-------TGGCGAGTACTATATGTACATATGTACATAT------AAACGAAGAAATACAAACCAATTTCCTGTGGATG
droEre2 scaffold_4784:23190222-23190525 + GTACTTAAATGGCGGACGATTTGCAAAACTACAAACTACAATTGCAACAAGTGTGTATAAATA-------------------------------------------------TAGTTATTTATACTTCTTTTTTCTTTTGGAAATTAGTCTAAAATATATTTATTTTGGTGTGCTAGTGCTAAAGTTTGTACATGTTTCGTTTATATCCTTGAAAAGAAAGATATTTTGTTTAGTCCAGTTAAAATGATGGTGGTCGATAGTCGACGAAGCGCACTAGGAAAATGTACGAAGGCGATTGCTATATGT----ATGTACATGCATATATACACGAAGCAAAACA----AATTTGCTGTGGTTG
droYak3 3L:24017503-24017573 + GTATTTAAATGGCGGACGATTTGCAAAATTACAAACTACAGTTGCAACAAGTGAGTAAAATTA-------------------------------------------------TAGGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409868:5474-5550 + T----TAAATGGCGGACGACCTCCAAAACTACAAATTGCAATTGCAACAGGTGTTTATAATC------TTTAAATATATA-----------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301161:75798-75858 - T-AGTAAAATGGCGGATGATTTACAAAACTATAAATTGCAGTTGCAACAGGTGAGTGTATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415102:3731-3808 - T-AGTTAAATGGCGGACGATCTTCAAAACTATAAATTGCAACTGCAACAGGTACGTTTGAAAAAGTGAGTTATATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490980:18311-18365 - GTACTT-CATGGCGGACGATCTGCAAAACTACAAATTGCAATTGCAACAGGTGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454031:4019-4133 - GTGTTTAAATGGCCGACGATCTTCAGAATTACAAATTGCAATTGCAGCAGGTGAGTTAAAGTAGG-CAGCTTTG------------TGTTCATTAAAATTGTCATTAACGTACATATATT---------------------------------------------TAG-----------------ATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302683:210326-210380 + ATATGTAAATA----------------------------------------------------TATATATTAATAATTGA-----------------------------------------------------------------------------------ATTTACTACTGTCTTGATATTGATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:22883812-22883869 + TTATTGAAATGGCTGACGAATTGCAAAACTACAAATTACAATTGCAACAGGTAATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:13889286-13889346 - --------ATGGCGGACGATTTGCAGAACTACAAATTGCAGCTGCAGCAGGTAAGTGGAGATG-------------------------------------------------CATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12958:698315-698412 - --------ATGGCAGACGATTTACAAAATTACAAATGCCAATTGCAGCAAGTGAGTATTGTGT-------TATATAAATTTCAAAGAATGC--------TGTTATTAAACTGCAGATGTT-----------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:4201324-4201425 - TTGCT---ATGGCCGACGAATTACAAAACTACAAATGCCAATTGCAGCAAGTGAGTATTTGT------GTAGAAAAAATATTGTAGTGCGC---------------------------------------------------------------------------------------GTTAA--AATGTACACTTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTATGTATAATTAAATATATTAAATATATA-----------------------------------------------------------------------------------GTTTAGTGTGGTCTTGGTAAAGATTGTATATGTTTCGCTTATATTCT----------------TTGTTCAGTCCTGTTAAAACGATTGTAGTCAGTAGTCGATGATGCGCAGCTCTAGGATGTACGGTGGCCAGTACTATA------TATGTACATAC------AAACGAAGAAATACATACCAATTTGCTTTGGATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................ATGCGCAGCTCTAGGATG............................................................................1836.0018171000000000000000
............................................................................................................................................................................................................................................................AGTCAGTAGTCGATGATG...........................................................................................1832.67871000000000000000
..........................................................................................................................................................................................................................................................................GATGCGCAGCTCTAGGATG............................................................................1931.33440000000000000000
....................................................................................................................................................................................................................................................................GTCGATGATGCGCAGCTCTAGGATG............................................................................2530.67210100000000000000
.............................................................................................................................................................................................................................................TGTTAAAACGATTGTAGTCAGT......................................................................................................2230.67201100000000000000
..ACTTAAATGGCGGACGAC.....................................................................................................................................................................................................................................................................................................................................................1830.67210000000000100000
.....TAAATGGCGGACGACTTGCATAATTAA.........................................................................................................................................................................................................................................................................................................................................2730.33100000000000010000
....TTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................2130.33100000000000001000
....................................................................................................................................................................TTTAGTGTGGTCTTGGTAAA.................................................................................................................................................................................2030.33100000000001000000
......AAATGGCGGACGACTTGC.................................................................................................................................................................................................................................................................................................................................................1830.33100000001000000000
...........................................................................................................................................................................................................................................................................ATGCGCAGCTCTAGGATGTACG........................................................................2230.33110000000000000000
....................................................................................................................................................................................................................................................................................................GCCAGTACTATA------TATGTACAT..........................................2130.33100001000000000000
................................................................................................................................................................................TTGGTAAAGATTGTATATGT.....................................................................................................................................................................2030.33100000001000000000
...........GCGGACGACTTGCATAATTAT.........................................................................................................................................................................................................................................................................................................................................2130.33100000000000001000
...CTTAAATGGCGGACGACTTGCAT...............................................................................................................................................................................................................................................................................................................................................2330.33101000000000000000
...........GCGGACGACTTGCATAATTA..........................................................................................................................................................................................................................................................................................................................................2030.33100000000000001000
............CGGACGACTTGCATAATTA..........................................................................................................................................................................................................................................................................................................................................1930.33100000000000001000
....................................................................................................................................................................................................................................................................................................GCCAGTACTATA------TATGTACA...........................................2030.33100001000000000000
............................................CAACAAGTATGTATA..............................................................................................................................................................................................................................................................................................................1530.33100000001000000000
.TACTTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................2430.33100000000001000000
..............................................................................................................................................................................................................................................GTTAAAACGATTGTAGTCAGT......................................................................................................2130.33100000000000001000
....................................................................................................................................................................................................................................................................................TCTAGGATGTACGGTGGCCAGTA..............................................................2330.33100000000000001000
.TACTTAAATGGCGGACGA......................................................................................................................................................................................................................................................................................................................................................1830.33110000000000000000
GTACTTAAATGGCGGACGACTTGC.................................................................................................................................................................................................................................................................................................................................................2430.33100100000000000000
.....................................................................................................................................................................................................................................TTCAGTCCTGTTAAAACGATT...............................................................................................................2130.33100000000000001000
.................................................................................................................................................................................................................................................................................AGCTCTAGGATGTACGGT......................................................................1830.33100000000001000000
GTACTTAAATGGCGGACG.......................................................................................................................................................................................................................................................................................................................................................1830.33100100000000000000
droSec2
GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTGTGTATAATTAAATATATAAAATATATG-----------------------------------------------------------------------------------GTTTATTGTGGTCTTGGTAAAGATTGTATATTTTTCGCTTATATTCT----------------TTGTTCAGTCCTGTTAAAACGATAGTAGTCAGTAGTCGATGATGCGCAGCTGGAGGATGTACGGTGGCCAGTACTATA------TATGTACATTC------AAACGAAGAAATACATACCAATTTGCTTTGGATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.TACTTAAATGGCGGACGAC.....................................................................................................................................................................................................................................................................................................................................................1911.0010001
................................................................................................................................................................................................................................................................AGTAGTCGATGATGCGCAGCTGGAGGG..............................................................................2711.0010010
........................................................................................................................................................................................................................................................................ATGATGCGCAGCTGGAGGAT.............................................................................2011.0010100
..ACTTAAATGGCGGACGACT....................................................................................................................................................................................................................................................................................................................................................1911.0010001
GTACTTAAATGGCGGACGAC.....................................................................................................................................................................................................................................................................................................................................................2011.0011000
.................................................................................................................................................................................................................................................................................AGCTGGAGGATGTACGGTGGCCAG................................................................2411.0010010
.........................................................................................................................................................................................................................................................AGTAGTCAGTAGTCGATGATG...........................................................................................2111.0010010
......................................................................................................................................................................TATTGTGGTCTTGGTAAAG................................................................................................................................................................................1911.0010010
.......................................................................................................................................................................................................................................................ATAGTAGTCAGTAGTCGATGATG...........................................................................................2311.0010001
..ACTTAAATGGCGGACGACTTG..................................................................................................................................................................................................................................................................................................................................................2111.0011000
...........................................................................................................................................................................................................................................................................ATGCGCAGCTGGAGGATG............................................................................1811.0010001
...........................................................................................................................................................................................................................................................................ATGCGCAGCTGGAGGATGTA..........................................................................2011.0010100
dm3
GTACTTAAATGGCGGACGACTTGCATAATTATAAGCTACAATTGCAACAAGTGTGTATAATTAATTAAATAAAGTATATA-----------------------------------------------------------------------------------TTTTGGTGTGGTCTTGGTCAAGATTGTATATGTTTCGCTTATATTCTTTAA-GTAAAGACATTTTGTTCAGTCCT-TTAAAATAATAGTAGTCAGTAGTCGATGAAGCGCAACTGGAGGA-------TGGCGAGTACTATATGTACATATGTACATAT------AAACGAAGAAATACAAACCAATTTCCTGTGGATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ACTTAAATGGCGGACGACT....................................................................................................................................................................................................................................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000002000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000
.........................................................................................................................................................................................................................................................AGTAGTCAGTAGTCGATG..............................................................................................1815.0050000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................AAGCGCAACTGGAGGA-------TGGCG..................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000002000000000000010
...CTTAAATGGCGGACGACT....................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CAACTGGAGGA-------TGGCGAG................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000300000000000000000000000000000000000000
......AAATGGCGGACGACTTGCATAATT...........................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGACTTGCATAATTATAAGCTAC..................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........ATGGCGGACGACTTGCAT...............................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000
......AAATGGCGGACGACTTGCAT...............................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......AATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
..ACTTAAATGGCGGACGACTTGCATAA.............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACTTAAATGGCGGACGACTTGC.................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAGACATTTTGTTCAGTT.............................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GTAGTCAGTAGTCGATGAAG...........................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GTAGTCAGTAGTCGATGAAGC..........................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..ACTTAAATGGCGGACGACTTG..................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTTTCGCTTATATTCTTTAA-..................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000
............................TTATAAGCTACAATTGCAACAAGTGTG..................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCGCAACTGGAGGA-------TGGCGAG................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010
...CTTAAATGGCGGACGACTTGCATAAT............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AGTAGTCAGTAGTCGATGAAGCGCAACT....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TACAATTGCAACAAGTGG...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................ATAATAGTAGTCAGTAGTC..................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GACGACTTGCATAATTATAAGCTACAAT...............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TAA-GTAAAGACATTTTGT...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCGCAACTGGAGGA-------TGGCGA.................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................TCTTGGTCAAGATTGTATATGTT....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GTATATGTTTCGCTTATATT.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CAGTAGTCGATGAAGCGCAACTGGA.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAGCGCAACTGGAGGA-------TGGCGA.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................TGCATAATTATAAGCTACA.................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TCAAGATTGTATATGTTTCGC................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
GTACTTAAATGGCGGACGACTTGC.................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAAGATTGTATATGTTTCGCT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACATATGTACATAT------AAACGAAGAAATACA...................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGGTGTGGTCTTGGTCAAGATTGTAT.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AAATGGCGGACGACTTGCATAA.............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATTATAAGCTACAATTGCAACAAGTGT...................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................................................................CAACTGGAGGA-------TGGCGAGTA..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............ACGACTTGCATAATTATAAGCT....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCGCAACTGGAGGA-------TGGC...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.TACTTAAATGGCGGACGACTTG..................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................TGAAGCGCAACTGGAGGA-------TGGCG..................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...CTTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................AACGAAGAAATACAAACCAATTTCC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AATGGCGGACGACTTGCATAATTA..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................ATATA-----------------------------------------------------------------------------------TTTTGGTGTGGTCTTGG.....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATAAGCTACAATTGCAACAA.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATTAAATAAAGTATATA-----------------------------------------------------------------------------------TTTTGGTGTGG...........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGCGAGTACTATATGTACATATG...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATTAATTAAATAAAGTATATA-----------------------------------------------------------------------------------......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GTCGATGAAGCGCAACTG...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CGATGAAGCGCAACTGGAGGA-------ATC....................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GA-------TGGCGAGTACTATATG.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GATGAAGCGCAACTGGAGGA-------TGGCG..................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................CGCAACTGGAGGA-------TGGCGAG................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................AGTAGTCGATGAAGCGCAACTG...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGTCAGTAGTCGATGAAGCGC........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................CTACAATTGCAACAAGTGTGT.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....TTAAATGGCGGACGACTTG..................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................TAAGCTACAATTGCAACAAGTGGA..................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTATAAGCTACAATTGCAACAAGTGGA..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................ATTTTGTTCAGTCCT-TTAAAA....................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AGCGCAACTGGAGGA-------TGG....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......AATGGCGGACGACTTGCATAAT............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................TTGGTGTGGTCTTGGTCAAGATTGT...........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTACTTAAATGGCGGACGACTTGCA................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
GTACTTAAATGGCGGACGC......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AGTAGTCGATGAAGCGCAAC.....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCGATGAAGCGCAACTGGAGGA-------TGGC...................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..ACTTAAATGGCGGACGAA.....................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droEre2
GTACTTAAATGGCGGACGATTTGCAAAACTACAAACTACAATTGCAACAAGTGTGTATAAATA-------------------------------------------------TAGTTATTTATACTTCTTTTTTCTTTTGGAAATTAGTCTAAAATATATTTATTTTGGTGTGCTAGTGCTAAAGTTTGTACATGTTTCGTTTATATCCTTGAAAAGAAAGATATTTTGTTTAGTCCAGTTAAAATGATGGTGGTCGATAGTCGACGAAGCGCACTAGGAAAATGTACGAAGGCGATTGCTATATGT----ATGTACATGCATATATACACGAAGCAAAACA----AATTTGCTGTGGTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................GGTGTGCTAGTGCTAAAGTTTGTAC.........................................................................................................................................................................2511.0010000100
GTACTTAAATGGCGGACGAT.....................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..........................................................................................................................................................................................................................................................GTGGTCGATAGTCGACGA.............................................................................................1811.0011000000
....TTAAATGGCGGACGATTTGCAAAAC............................................................................................................................................................................................................................................................................................................................................2511.0010000001
droYak3
GTATTTAAATGGCGGACGATTTGCAAAATTACAAACTACAGTTGCAACAAGTGAGTAAAATTA-------------------------------------------------TAGGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....TTAAATGGCGGACGATTTGC.................................................................................................................................................................................................................................................................................................................................................2021.00200000020000
..ATTTAAATGGCGGACGATTTGC.................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
....TTAAATGGCGGACGATTTGCAAAAT............................................................................................................................................................................................................................................................................................................................................2520.50100000010000
...TTTAAATGGCGGACGATTTGCAAA..............................................................................................................................................................................................................................................................................................................................................2420.50101000000000
.....TAAATGGCGGACGATTTGC.................................................................................................................................................................................................................................................................................................................................................1920.50100000010000
.................................AACTACAGTTGCAACAAGT.....................................................................................................................................................................................................................................................................................................................1920.50100010000000
..ATTTAAATGGCGGACGATTTGCAAAAT............................................................................................................................................................................................................................................................................................................................................2720.50100000010000
droEug1
T----TAAATGGCGGACGACCTCCAAAACTACAAATTGCAATTGCAACAGGTGTTTATAATC------TTTAAATATATA-----------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T-AGTAAAATGGCGGATGATTTACAAAACTATAAATTGCAGTTGCAACAGGTGAGTGTATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
T-AGTTAAATGGCGGACGATCTTCAAAACTATAAATTGCAACTGCAACAGGTACGTTTGAAAAAGTGAGTTATATGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTACTT-CATGGCGGACGATCTGCAAAACTACAAATTGCAATTGCAACAGGTGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTGTTTAAATGGCCGACGATCTTCAGAATTACAAATTGCAATTGCAGCAGGTGAGTTAAAGTAGG-CAGCTTTG------------TGTTCATTAAAATTGTCATTAACGTACATATATT---------------------------------------------TAG-----------------ATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATATGTAAATA----------------------------------------------------TATATATTAATAATTGA-----------------------------------------------------------------------------------ATTTACTACTGTCTTGATATTGATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTATTGAAATGGCTGACGAATTGCAAAACTACAAATTACAATTGCAACAGGTAATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....GAAATGGCTGACGAATTGCAAAA.............................................................................................................................................................................................................................................................................................................................................2311.001000010
........ATGGCTGACGAATTGCAAAACT...........................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
--------ATGGCGGACGATTTGCAGAACTACAAATTGCAGCTGCAGCAGGTAAGTGGAGATG-------------------------------------------------CATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............GACGATTTGCAGAACTACAAAT.....................................................................................................................................................................................................................................................................................................................................2211.00110000
.........................GAACTACAAATTGCAGCTGCAGCAGGT.....................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
--------ATGGCAGACGATTTACAAAATTACAAATGCCAATTGCAGCAAGTGAGTATTGTGT-------TATATAAATTTCAAAGAATGC--------TGTTATTAAACTGCAGATGTT-----------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTGCT---ATGGCCGACGAATTACAAAACTACAAATGCCAATTGCAGCAAGTGAGTATTTGT------GTAGAAAAAATATTGTAGTGCGC---------------------------------------------------------------------------------------GTTAA--AATGTACACTTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................TACAAAACTACAAATGCCAATTGCAGCA........................................................................................................................................................................................................................................................................................................................2811.001100000

Generated: 05/18/2015 at 10:12 AM