ID:dsi_789 |
Coordinate:3l:15990390-15990539 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_15990032_15990389_-]; CDS [3l_15990032_15990389_-]; intron [3l_15990390_15990941_-]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CACTTTGGCCACATAGCAACCTTCATTTTTAATCGGAGTAACTTGTCGTTCTAATGATAAGTGCATAGAACTTAGCAAATTGCAATTTATTATGGTTTTAAATTAAACTCGCAGAAGCGAGTTATAAAAGGAGCTTATAAAGATATTAGCTATTAAAAGGCTATAGACCGGACTTAATTAATTTGCAATTGAACTTTCAGACCCCCGCCACAATGCTGAGCCTGCTGCATGGAAAGAGCGTGGAACCGCA **************************************************....((.(((((.......))))).))((((((((.(((((((((((((......(((((((....)))))))........((((.(((....))).)))).....))))))))))............))).))))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................ATGGAAAGAGCGTGGAACCGC. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................CTAATCGGAGTAACT............................................................................................................................................................................................................... | 15 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ............................TTAATCGGAGTTACTGGGCG.......................................................................................................................................................................................................... | 20 | 3 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 |
| .....................................................................................................................CGAGATATAAAAGGA...................................................................................................................... | 15 | 1 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 |
| ................................................................................................................................TGGAGCTGGTAAAGATATTA...................................................................................................... | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 1 |
| .....................................................................................................................................................................................................................TGCTGAGCAGGCTGCAGGGA................. | 20 | 3 | 11 | 0.09 | 1 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................CTTATAAAAATATTAGCTGA................................................................................................. | 20 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
GTGAAACCGGTGTATCGTTGGAAGTAAAAATTAGCCTCATTGAACAGCAAGATTACTATTCACGTATCTTGAATCGTTTAACGTTAAATAATACCAAAATTTAATTTGAGCGTCTTCGCTCAATATTTTCCTCGAATATTTCTATAATCGATAATTTTCCGATATCTGGCCTGAATTAATTAAACGTTAACTTGAAAGTCTGGGGGCGGTGTTACGACTCGGACGACGTACCTTTCTCGCACCTTGGCGT
**************************************************....((.(((((.......))))).))((((((((.(((((((((((((......(((((((....)))))))........((((.(((....))).)))).....))))))))))............))).))))))))..........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................................TGTTACGACTCGGACGACGTA.................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................................................................TCTGGCCTGAATTAATTAAAC................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 |
| ....................................................................................................................TGCTCTATATTTTCCTC..................................................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 |
Generated: 04/24/2015 at 12:38 AM