ID:

dsi_7858

 Coordinate:

x:19972430-19972724 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.4 -20.4 -20.2

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

ATTTAATTAAACGAGAGCAGTCTTCGGTTCGAGGCAATAATATTATTCAAGTAAAGCGCGATTTGAACAAACTTTTATTTACGACTAGGCAATAAAAAGCACTTTTCATTTAGCAATATTGTTTTATGCGAAAATACCGTAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTTCTTTGTTGGTGTGTGTGTAATTGTGTGAGCTTTATATACGGTCGAACTCAATGTGCTTGTGTGCGTGCTGCTTTGTATATTTGTTTTTATTTTACTATATTTTTTTTATTGAGTTGAAATAGTTGCATTTCAGAGGCTGTTGAATACATAACCTAAAAAACTAGAACTAAACGTTTGAAGGTTATGAACAGACCCGTTCCTCCCCCACTA
**********************************************************************************************************************************************************************************************((((..(((((((((..((....)).))))))))).))))((((((((.((..(((((((........)))))))..))......................))))))))((((((......)))))).....************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
 O001
Testis
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
............................................................................................................................TACGCGAGAAGACCGTAAAA........................................................................................................................................................................................................................................................... 20 3 3 2.00 6 0 6 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGGTGTGTGTGTAATTGTGT........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................AGGTTATGAACAGACCCGTTC........... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TGAAATAGTTGCATTTCAGAGGC......................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTCGAACTCAATGTGCTTGTGG.................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................................GAACTAAACGTTTGAAGGTTATGAA...................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................TATTTTTTATTGAGTTGAAATAA........................................................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................CTTTGTTGGTGTGTGTGTAATT............................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................CAGCTGTTCTTTGTTGGTGTGT.................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................ACAAACGTCATCAGCTGTT.................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTGTGTGTAATTGTGTGAGCT................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................TTATGAACAGACCCGTTCCTCCCC..... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TAACAAACGTCATCAGCTGTT.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTGTGAGCTTTATATACGGGC....................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................ACTTTTCATTTAGCAAT...................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................ACCGTAAAAAATAAGCGACG................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................CTTTTGAAGGTTATGAACAGA.................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................CGATTTGAACAAACTTTTATT............................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGAGCTTTATATACGGTCGAACT.................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TTATATACCGTCGAAATCAGT.............................................................................................................................................................. 21 3 6 0.50 3 2 0 0 0 0 0 0 0 1
...............................................................................................................................GCGAGAAGACCGTAAAA........................................................................................................................................................................................................................................................... 17 2 20 0.20 4 0 4 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAATTGTGTGAGCCTT................................................................................................................................................................................. 16 1 10 0.20 2 0 0 0 2 0 0 0 0 0
..................................................................................................................................................................................GGCTGTTCTTAGTTGGTG....................................................................................................................................................................................................... 18 2 16 0.19 3 0 0 0 0 0 3 0 0 0
................GAAGTGTTCGGATCGAGGC........................................................................................................................................................................................................................................................................................................................................................................ 19 3 15 0.13 2 0 0 0 0 0 2 0 0 0
..........................................................................................................................................................................................................TAATTGTGTGAGCCT.................................................................................................................................................................................. 15 1 18 0.11 2 0 0 0 2 0 0 0 0 0
.............................................................................................................................ACGCGAGAAGACCGTAAAA........................................................................................................................................................................................................................................................... 19 3 19 0.11 2 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................TTTGTTGGTGTGTTTGT................................................................................................................................................................................................ 17 1 20 0.10 2 0 0 0 2 0 0 0 0 0
...........................................................................................................................................................................................................AATTGTGTGAGCCTT................................................................................................................................................................................. 15 1 20 0.10 2 0 0 0 2 0 0 0 0 0
...................................................................................................................................................................................GCCGTTCTTAGTTGGAGTG..................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................................TTGTGTGTTTGCTGCTTTGTGT.................................................................................................................................... 22 3 20 0.05 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................TCAATGTGCTTATGT.................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................AATTACCGTAAAAAA......................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................TGTTGGTGTGTGTGT................................................................................................................................................................................................ 15 0 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TAAATTAATTTGCTCTCGTCAGAAGCCAAGCTCCGTTATTATAATAAGTTCATTTCGCGCTAAACTTGTTTGAAAATAAATGCTGATCCGTTATTTTTCGTGAAAAGTAAATCGTTATAACAAAATACGCTTTTATGGCATTTTTTATTCGCTGCGCGTGTTTTATTGTTTGCAGTAGTCGACAAGAAACAACCACACACACATTAACACACTCGAAATATATGCCAGCTTGAGTTACACGAACACACGCACGACGAAACATATAAACAAAAATAAAATGATATAAAAAAAATAACTCAACTTTATCAACGTAAAGTCTCCGACAACTTATGTATTGGATTTTTTGATCTTGATTTGCAAACTTCCAATACTTGTCTGGGCAAGGAGGGGGTGAT
*************************************************************************((((..(((((((((..((....)).))))))))).))))((((((((.((..(((((((........)))))))..))......................))))))))((((((......)))))).....********************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
......................................................................................................................................................................................................................................................................................................................GTAAAGTCTCCGACAACTTAT................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0
...........GCTCTCGTCAGAAGCCAAGCT........................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............TCGTCAGAAGCCAAGCTCCGTT...................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..............CTCGTCAGAAGCCAAGCT........................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................AAGTTCATTTCGCGCG.............................................................................................................................................................................................................................................................................................................................................. 16 1 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................GCGTGGTTTATTGTTTG............................................................................................................................................................................................................................... 17 1 3 0.67 2 0 2 0 0 0 0 0 0
............................................................................................................................ATGCGCTCTTCTGGCATTTT........................................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 1 0 0 0 0 0
...............................................................................................................................CGCTTTTTTGGCATTTT........................................................................................................................................................................................................................................................... 17 1 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................GAAATCTTTGCCAGCTTG................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................TCGGCAAGGATGGGGTTAT 19 3 6 0.17 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGATATGCAAGCTTGA.................................................................................................................................................................. 17 2 9 0.11 1 0 0 1 0 0 0 0 0
.............................................................................AACTGCTGATCCGTTGTT............................................................................................................................................................................................................................................................................................................ 18 2 10 0.10 1 0 0 0 0 0 0 1 0
..............................................................................................................................ACGCTTTTTTGGCAT.............................................................................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................GTAGTTGACAAGAAA.............................................................................................................................................................................................................. 15 1 17 0.06 1 0 1 0 0 0 0 0 0
........................................................................AAAATAGAGGCTGATCCGG................................................................................................................................................................................................................................................................................................................ 19 3 19 0.05 1 0 0 0 0 0 1 0 0
.............................................................................................................................TGCGCTCTTCTGGCATTTT........................................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................ATGATATAAAAAAACT...................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................CTCAACTTACACGAACACA.................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................................................................................AAAACTAAAATGATAT............................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19972380-19972774 + dsi_7858 ATTTAATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATT---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACTAGGCAATAAAAAGCACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTA----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGTCGAACTCAATGTGCTTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTATAT---TTTTTTTAT-TGAGT-----TG-----------------------------AAATAGTTGCATTTCAGAGGCT-----------------------------------------------GTTG----------------------------------------------AATACATAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----TCCT-CCCC------CACTA
droSec2 scaffold_8:3546968-3547364 + ATTTAATTTA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATT---------------ATTCAAGTAAAGCG---------------CGATTT------------AAACAAACTT-TTATTTACGACTAGGCAATAAAAAGCACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTGTG--------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGCGAACTCAATGTGCTTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTATTT---TTTTTTTAT-TGAGT-----TG-----------------------------AAATAATTGCATTTCAGAGGCT-----------------------------------------------GTTG----------------------------------------------AATACATAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----TCCT-CCCC------CACTA
dm3 chrX:21239103-21239494 + ATTTAATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATC---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACTAGGCAATGAAAAACACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAATATAAGCAACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGCGAACTAAATGTGCCTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTA------TTTTTTTAT-TGAGT-----TG-----------------------------AAATAATTGCATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AATACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----CCCT-CCCC------CACCA
droEre2 scaffold_4690:17769702-17770071 + ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATAGTTTC---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACAAGGCAATAAAAAACACTTTTCATTTAGC---------------------------------------------------------------ATTA-------------------TTG-CT--TTATGCGAAAATACCC---TAAAAACTAAGCGACGCGCAAAAAATATCAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATGCGGGCGAACTCAATGTGTTTG--------------------------------------------------------------------------------------------------------------TG----------CT-GCTTT-TATATTTTGTTTTTA--------------------T--------------TTTTTTATAT---TTTTTTTAT-TATGTTAAAGTC-----------------------------AAATA-------------------------------------------------------------------G----------------------------------------------AGAACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CTG---------T-----CCCT-C--------------
droYak3 X:20418166-20418560 + ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATAGTTTT---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACAAGACAATAAAACGCATTTTTCATTTAGC---------------------------------------------------------------TTTA-------------------TTG-TT--TTATGCGAAAATACCT---TAAAAAATAAGAGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------ATGTGTG---------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGCGAACTAAATGTGCTTGTGT--G--------------------T------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATGTT-TGTTTTTT--------------------T-TTT----------TTTTCTATTT------T-TTA--TAAGTTAAAATC-----------------------------AAATAATTAAATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAA----ACG---------T-----CCCTGCCCC------CACCG
droEug1 scf7180000408193:234408-234788 - ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGAGGC--AGTAATTTC---------------ATTCAAGTAAAGCG---------------CGATTT------------AAACAAACTT-TTATTTATGATTAGGCAATAAAAAACACTTTTCATTAAGG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAAACT---CAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGT-----------GTGTATG---------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGAAAATACAGTGCTCTTGTATATG--------------------C------------------------G----------------------------------------------------------TG----------CC-GTTTAATA-----------------------------------T--TTTTTTG--T--------TA---TTTATTCAA-TAAATTGGAATC-----------------------------AAATGATTGCATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------ATCTAACCGTTTGAAGGTTATGAACGGAC----CAA---------C-----CCCT-CCTC-----------
droBia1 scf7180000302432:371199-371559 - ATTTAATTAA-AC---GAGAGCAGAC-----------------------------------------------TCTTCGATTCGAGGC--AATAATTTC---------------AGTCAAGTAAATTG---------------CGATTA------------AAGCAAACCT-TTATTTATGCTAAGACCCTAAAAAACCGTTTTCATTTAGG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAACCT------AAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGTTTGTG----------------------------------------------------------------------------------------------------------------------------TGAGCTCTATACACGGGAGAACTCAGTGTGCTCGGAT--G--------------------T------------------------G----------------------------------------------------------TG----------TT-TCCTAGTTAACT-TG----------------------------------------------------------------AAAATCGAAATC-----------------------------AAATGGTTGCATTTAAAAG-TC-----------------------------------------------GTTC----------------------------------------------AAATCCTAACCTG-AA-----------AACCAG------------------AATTATACGTTTGAAGGTTATGAACAGAA----TAG---------C-----CCCT-CTCC--------CTG
droTak1 scf7180000415769:192694-193067 - ATTTAATTAA-AC---GAGAGCAGAC-----------------------------------------------CCTTCGATTCGAGGC--AATAATTTC---------------ATTCAAGTAAATTG---------------CGATTT------------AAACAAACCT-TTATTTATGCTAAGTTCATAAAAAACAGTTTTCATTTAGA---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATGT----AAAAATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGTTTGTA----------------------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGAGAACCGATTGTGCTTGAGTGTG--------------------T------------------------G----------------------------------------------------------TG----------CT-GCCTT-----------------------------------TTTT--TTCT--------------TATTC---AACAAT-AAAATATAAATG-----------------------------AAATGGTTGCATTTGAAAGTCA-----------------------------------------------GTTA----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------AACTAATCGTTTGAAGGTTATGAACAGAA----TCG---------C-----CCCT-CCCC-----------
droEle1 scf7180000491087:1167952-1168333 - ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGAGGC--AATAATTTC---------------ATTCAAGTAATACG---------------CGATTT------------GAACAAAGCT-TTATTTATGCTAAGGCAATAAAATGCAGTTTTTATTTAAG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATCT----AAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTATGTTTGTGT--GTT----------------------------------------------------------------------------------------------------------------------------TGCGCTCAATAAGCGGGAGAACTTTGTGTGCTTGTGTGTG--------------------C------------------------A----------------------------------------------------------TG----------TT-GTTTT-----------------------------------ATTT--TGTGG--CT---------TATTT---ACTTATTTAAATTGGAATA-----------------------------AAATGATTGCATTTCGAAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCA---------CC----ACCT-CCCC------TTTTA
droRho1 scf7180000779980:50427-50808 - ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGGGGC--AATAATTTC---------------ATTCAAGTAAATCG---------------CGATTT------------AATCAAAGCT-TTATTTATGCTAAGGCAATAAAATGCAGTTTTCATTTAAG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAATTT---T-AAAAATAAGCGACGCGCACAAAATAACAAACGTCATTAGCTGTT-CTTTGTTTGTGT--GTT----------------------------------------------------------------------------------------------------------------------------TGGGGTCTATAAGCGGGCGAACTTTGTGTGCTTGTGTGTG--------------------A------------------------A----------------------------------------------------------TG----------TT-GTTTT-----------------------------------ATTT--TTTTTG-CC---------CATTG---ACTTAT-TAAATTGAAATA-----------------------------AAATGATTGCATTTCGAAGGCA-----------------------------------------------GTTG----------------------------------------------AAAATCTAACCTAGAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACCGAC----CCA---------CT----GCCT-CCCC------TTTCA
droFic1 scf7180000453926:216087-216455 + ATTTAATTAA-AC---GAGAGCAAAG-----------------------------------------------TCTTCGATTCGGGGC--AACAATTTC---------------ACTCAAGTAAAACG---------------CGATTA------------AAACAAACTT-TTATTTATGCTCAGTTTGTATAAAACCGTTTTCATTTAAA---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATCTAGAAAAAATATAGGCGACGCGCAAGAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGT--GTG----------------------------------------------------------------------------------------------------------------------------TGAGTTTGATGTGCGGAAGAAATTTGTGTGCTTGTGTGT-------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------ATTT--TTTGTA------------TAT-----AAATAT-TAA-----ATTT-----------------------------AAGTGATTGCTTTTCAAAGTTA-----------------------------------------------GTTG----------------------------------------------AACACCTAACCTAAAA----------AAATTAG------------------AACTAACTGTTTGAAGGTTATGAACACAA----CCG---------C-----CCCT-CCCC------CTTTT
droKik1 scf7180000302586:297425-297836 + ATTTAATTAA-AC---GAGAGCAGAT------------------------------------------------------------AC--AATTATTCCTTCGACGGCGGA--TTTTCAAGTAATTCGCTTTGATT---GTTACGATTT------------AAACGTAGCT-TTATTTATGCTCAAGCCCAGTGCAGTGCTTTTCATTAAAG---------------------------------------------------------------ATTT-------------------CTG-TT--TTGTGCGAAAAAATCT---T-AAGAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-TGCTGTTTGTGT-----------GCGTATG----------ATTTTGAGAGTGTG---------------------------------------------TGGG--------------------------------------TGTGCTTTATTTGCGGGAGAATTTT---------------------------------------------------------------------------------------------TTCCTTAACTTTGT-----------------------------------------------ATGTGTACATATATGTTTTTTTTT--CTTGC---T---------TTCCT---ATTTAA-TAAATGAAAATC-----------------------------AAATGAGTGCACTTGAAGG------------------------------------------------------------------------------------------------------TACCTAACCTAGAA-----------AACGGG------------------GACTAAACCTTTGAAGGTTACGGCTG--C----CAG---------C-----CCCT-CCTCCT----TGCCA
droAna3 scaffold_13117:3145553-3146018 - ATTGAATTAAAAC---AAGAGCAGGAG-GC-AACTTCAAATTAATACAAT--------ATCATCGGCGT-----------------------ATATTTCTG--GTGCGGTT--ATTTCAAGTAAATCA---------------CAAATTATTCGATATTTGAAACGGGCCT-TTATTTATGGCAGAGCGATGGCCTAAGTTTTTCATTTAACAAAAC-A-----------------ATG------------------------------------ATAT-------------------TTGTTT--TTGTGCGAA--------------AATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGTTTGTG-----------GG----AGCATCAG------------------------------------------------------------------------------------------------------------TGTGCG-----------TGTGTTTGTGTGTG--------------------TGTGTGAGAGAGAGA----------------GTGAAAAGTAGAGATGTGGAAGAACTTTTCGATAAGTTTCGGGGTGGG-GGGGAG----------CT-GCTTT-----------------------------------CTTT--TTTGTA-CA---------AGT-T---A-TTATTTAA-----AATT-----------------------------CAATCAT-----------GAAA-----------------------------------------------GTCG----------------------------------------------TAAACATAACCTAGAA-----------ATCTAG----------------GAAACTGGCCGTTTGAAGGTTATGGC-AGATACGGCAC--CG-----T-----AC---CCCC------CTCAC
droBip1 scf7180000395515:15623-16084 - ATTTAATTAAAAC---AAGAGCAGGAG-GC-AACTTCAAATTAATACAGT--------ATCATCGGCGA-----------------------ATATTTCTG--GTGCGGTT--ATTTCAAGTAAATCA---------------CAAAATTATCGGTATTTGAAACGGGGCT-TTATTTATGGCAGCCCGATAACTTTAGTTTTTCATTTAACAAAAC-A-----------------ATG------------------------------------ATTT-------------------TTGTTT--TTGTGCGAA--------------AATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGTTTGTG-G----GGGGGCG----AGCATGAG------------------------------------------------------------------------------------------------------------T-------------GTGTATGCGTGTATGTGTGTGTGA--------------------------GA----------------GTGAATAGTACATATGTGGAAGAACTTTTCGATAAGGTTGGGGGGGGGAGGGGTG----------CT-GCTTT-----------------------------------CTAT--TTTGTA-CA---------AGT-T---A-TTATTTAA------------------------------------------AATTGTATCATAA---AA-----------------------------------------------GTCG----------------------------------------------TAAACATAACCTAGAA-----------ATCTAG----------------GAAACTGGCCGTTTGAAGGTTATGG-CAGAA----ATA---------C-----CCCT-CTCC-T----CACTG
dp5 XL_group1a:1469790-1470270 - ATTAAATTAA-AT---AAGAGCAGAGCGGCCGAGC------------ACTGTGACTGCGAGTGCAATTCGATTTCTTCGATTCAAGTA--AATACTTTA---------------GT-------------------T---GAGAC-----------TATTTCAGGCGGGGCT-TCATTAATGCCCCTTGCAGGTGCATCAGTTTTCATTTAGGAAATG-GAT--AAA-TAAAATT----------CC---------------------------GCTATGCC-AT---TTCCTCCACAAC-ACTT--TTTTGC----------------AAAATAGTCGACGCGCACAAAATAACAAACGTCATCAGCTGTTTCTTTAACTGTGA-----------GTGTGTGCGAGCGTATGGCTGT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------TACGTGCGGTAGCGAGTCTGTTAGTGTG---------------------------------------TTT-------------GG--------------GTTTTGTACACT-TTTCGTT--------------------------------G--T--------TG---TTTTTTCGT-CGAAA-----TGAAAAAAGTGGACAAATAGAAAAAAACAAAAATTGATTGCATCT----------------------------------------------------------------------------------------------------------AAACCTAACCTAGAAACGGAATTGAAAACGAG------------------AATTGGTTGTTTGAAGGTTATGGCGATGC----CAT---------T-----GCCT-CGAC------CACCC
droPer2 scaffold_499:6424-6904 - ATTAAATTAA-AT---AAGAGCAGAGCGGCCGAGC------------ACTGTGACTGCGAGTGCGATTCGATTTCTTCGATTCAAGTA--AATACTTTA---------------GT-------------------T---GAGAC-----------TATTTCAGGCGGGGCT-TCATTAATGCCCCTTGCAGGTGCATCAGTTTTCATTTAGGAAATG-GAT--AAA-TAAAATT----------CC---------------------------GCTATGCC-AT---TTCCTCCACAAT-ACAT--TTTTGC----------------AAAATAGTCGACGCGCACAAAATAACAAACGTCATCAGCTGTTTCTTTAACTGTGA-----------GTGTGTGCGAGCGTATGGCTGT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------TACGTGCGGTAGCGAGTCTGTTAGTGTG---------------------------------------TTT-------------GG--------------GTTTTGTACACT-TTTCGTT--------------------------------G--T--------TG---TTTTTTCGT-CGAAA-----TGAAAAAAGTGGACAAATAGAAAAAAACAAAAATTGATTGCATCT----------------------------------------------------------------------------------------------------------AAACCTAACCTAGAAACGGAATTGAAAACGAG------------------AATTGGTTGTTTGAAGGTTATGGCGATGC----CAT---------T-----GCCT-CGAC------CACCC
droWil2 scf2_1100000004909:8777995-8778434 - ATTAAATTAA-AAAGCAAGGAAAGAAG-GA-AAAAACAGG---------AGCCACAGCGCCAGCAATTG-----------------------ATATACCTT--------AAATAATCAAAGTAAATTA-ATTGATT---TAATCAATTT-----------AATCGAAAGCT-TTATTAATCAACGAATTTAAATTACAACTTTTCATTTAACAAAAA-A-----------------A---------------------------------------------------------------------------GAA--------------AATAATTCAGCGCGCAGAAAACAACAAACGTCATCAGCTGTT-CTACT---G--------------------------------------------------------------------------------------TACCTACATACATATATAAATACTTATGTATAGTACGTGCGTTTGT-----------------------------GTGTGTGT--G--------------------TGTGTTACAGATAGA----------------GT-----------------------------------------GAGAGAGGGGCAGTTCTCTCTGTTGGCTTTGTTTGTT-TGTTTGTGCGTGTATAA-AATGAATTAATTT--TTTGTA------------CATTT---ATTT----A---------------------------------------AAATA-------------------------------------------------------------------G----------------------------------------------AAAATTTAACG--------------------AACATTGGGGTTATTCTATAGATTGTAATTTTGAAGGTTATGATGAGC----------------------------CCCC------CATCT
droVir3 scaffold_13042:4327428-4327728 + AATTAATTAA-AC---AAGAGCAGTACG-------------------------AGTTCGATTGCG--------ATTTCGATTCACCGTTCG-A-------TTGTTGGTGAA--ATTCAAAGTAAATTG-TTTAATAAAT--AAA-----------TATTTTATATTGTGCT-TAATTAATGCGCCAATTCGGTGTTGAAGTTTTCATTTAACAAAACGC-C--AAAATCAAATTCAACGACATTTTGTT---------------TTTCGTTTTGCTTTG-------------------CCG-TTTTATTTGC----------------AAAATAATCACTGCGAACAAAATAACAAACGTCATCAGCTGTT-TTGTGCTTGTCG--ACTTTGTGTGTGTGTGTG--------G----------------------------------------------------------------------------------------------------------------------------------TGTGTGT--G--------------------T------------------------G----------------------------------------------------------TG----------CT-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6359:2105159-2105778 - ATTAAATTAA-AC---AAGAGCAGTACG-------------------------AGTTTGATTGCG--------ATTTCGATTCACCGATTA-A-------TTATTGGTGAA--ATTCAAAGTAAATTTATTTTATAGATGAAA------------AATTTTAAATGGTGTTTTAATTAATGCGAAGATTCAATGTTTAAGTTTTCATTTAACAAAACGC-C--AAAAAAAGACTCAACGACATTTTGTT---------------TTTCATTTCGCTTTGCC-GT------------------TTTTATTTGC----------------AAAATAATCAGCGCGAACAAAATAACAAACGTCATCAGCTGTT-CTGTGCCAGTGT-----------GTGTGTCCG------------------TGTGTATGCTTAAGTTGCTTCCACATACGTATGTATGTTTGAGTGTACGTACGTATATGTGTAAATATGGAACTGTATTATATACATTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCTACATATAACTG--TATTT--CGCGC---TT--------TG---TTT-----------------TT-----------------------------AAATAAAAGCGTTAAAAA-GCGGTATAAAATATTACAGGAAATATATATTCATATGTATATGTATAAAAATTGTTGCACTCAGCCTCCCGTCTTACGCCCCCTTAATATTTTGCTACGTGAAACATAACCTACAAGCGCAT-TTAGAATGAG------------------AACT---TGTTTGAAGGTTACGACGCGGC----GCCACGAAACACCCCCAATCCT-CGCGTTTGGGAACGT
droGri2 scaffold_14853:7184506-7184920 + ATTTAATTAAAAC---AAGAGCAGTTCG-------------------------AGTTCGATTGCGATTCCAATTCTCCGATTT---------A-------TTGTTGCTGAA--ATTCAAAGTAAATTA-TTTCATT---GATCA-----------AATTTCAAATGGTGCT-TAATTTATGTACATTTGCGTTGTTTTAATTTTCATTTATCAAACA-C-CTTAAA-TGACTTT----------TCGTTGTTGTTGTTTTTTTCTTCCGATTTTCTTTGCCCGTTTTTTTTTTTTTTTTTT-TT--TTTTGCAAAAA----------------AATCACCGCGAACAAAACAACAAACGTCATCAGCTGTT-CTGTGCTTGTGGTTAGTTGGTGTGTATGTGTGTACATA--TC--------TGTG---------------------------------------------------------------------------------------TGTGTC-----TAC-----------------------------GTCGAAATGCATATGTATATGTGCATTAATGCGTGTGTGTATGTGTGAA----------------------------------------------------TG-------------------------------------------------------------------------------------------------------C-----------------------------AAATACT---------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------ATGC-----------ATTT----TAT---------T-----GTAT-ATAT------TTTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTTAATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATT---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACTAGGCAATAAAAAGCACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTA----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGTCGAACTCAATGTGCTTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTATAT---TTTTTTTAT-TGAGT-----TG-----------------------------AAATAGTTGCATTTCAGAGGCT-----------------------------------------------GTTG----------------------------------------------AATACATAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----TCCT-CCCC------CACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................TTGGTGT-----------GTGTGTA----------AT--------TGTG---------------------------------------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTATGAACAGAC----CCG---------T-----TC..................2111.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------------------AAATAGTTGCATTTCAGAGGC............................................................................................................................................................................................................................2311.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACTCAATGTGCTTGTGG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------AACTAAACGTTTGAAGGTTATGAA...............................................2511.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CTTTGTTGGTGT-----------GTGTGTA----------AT--------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CAGCTGTT-CTTTGTTGGTGT-----------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................ACAAACGTCATCAGCTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TGT-----------GTGTGTA----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAACAGAC----CCG---------T-----TCCT-CCCC------.....2411.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TAACAAACGTCATCAGCTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......................................................................................................................................................................................................ACTTTTCATTTAGC---------------------------------------------------------------AAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................ACCG---TAAAAAATAAGCGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................CGATTT------------GAACAAACTT-TTATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------TGAGCTTTATATACGGTCGAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTTGGTGT-----------GTGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
ATTTAATTTA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATT---------------ATTCAAGTAAAGCG---------------CGATTT------------AAACAAACTT-TTATTTACGACTAGGCAATAAAAAGCACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTGTG--------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGCGAACTCAATGTGCTTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTATTT---TTTTTTTAT-TGAGT-----TG-----------------------------AAATAATTGCATTTCAGAGGCT-----------------------------------------------GTTG----------------------------------------------AATACATAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----TCCT-CCCC------CACTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200
...................AGCAG-------------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................................AATAACAAACGTCATCAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................CGGTTCGAGGC--AATAATATT---------------ATTCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
.............................................................................................................................................................................................................................................................................................................................................................................GCTGTT-CTTTGTTGGTGT-----------GTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGT..................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................................................AGCTGTT-CTTTGTTGGTGT-----------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAT-TGAGT-----TG-----------------------------AAATAATTG........................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAACCTAAAA-----------AACTAG------------------AAC....................................................................2111.0011000
.TTTAATTTA-AC---GAGAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..TTAATTTA-AC---GAGAGCAG-------------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..........................................................................................................................................................................................................................................................................................................TTG-TT--TTATGCGAAAATACCG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................GAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..TTAATTTA-AC---GAGAGCAG-------------------------------------------------TCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.......TTA-AC---GAGAGCAG-------------------------------------------------TCTTCGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
dm3
ATTTAATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AATAATATC---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACTAGGCAATGAAAAACACTTTTCATTTAGC---------------------------------------------------------------AATA-------------------TTG-TT--TTATGCGAAAATACCG---TAAAATATAAGCAACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGCGAACTAAATGTGCCTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TGTTTTTA--------------------T--------------TTTACTA------TTTTTTTAT-TGAGT-----TG-----------------------------AAATAATTGCATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AATACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCG---------T-----CCCT-CCCC------CACCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....AATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATATT-TT..........................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
..........................................................................................................................................................................................................................................................................................................TTG-TT--TTATGCGAAAATACCG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000
.TTTAATTAA-AC---GAGAGCAG-------------------------------------------------TCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000200000
....AATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTAATTAA-AC---GAGAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAACGTTTGAAGGTTATG.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CAAAATAACAAACGTCATCAGCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTT-CTTTGTTGGTGT-----------GTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TT-CTTTGTTGGTGT-----------GTGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................AACAAACGTCATCAGCTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGT-----TG-----------------------------AAATAATTGCATTT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGAGCAG-------------------------------------------------TCTTCGGTTCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................ATC---------------ATTCAAGTAAAGCG---------------CGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-TGAGT-----TG-----------------------------AAATAATTGCATTTCA.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---------------------------------------------------------------------------------------TGAGCTTTATATACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTTTGAAGGTTATGAAC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GTT-CTTTGTTGGTGT-----------GTGTGTG----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................GAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTTATGAACAGAC----CCG---------T-----C...................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------TGAGCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGAC----CCG---------T-----CCCT-CCCC------.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AATTAA-AC---GAGAGCAG-------------------------------------------------TCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................ATC---------------ATTCAAGTAAAGCG---------------CGATTT------------GAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................GTCATCAGCTGTT-CTTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAG-------------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................TC---------------ATTCAAGTAAAGCG---------------CGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GCTGTT-CTTTGTTGGTGT-----------GTGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAAAGCG---------------CGATTT------------GAACAAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TCAGCTGTT-CTTTGTTGGTGT-----------GTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AC---GAGAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATA...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................CAAGTAAAGCG---------------CGATTT------------GAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGT-----------GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TAAAGCG---------------CGATTT------------GAACAAACTT-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGCCTGTGT--G--------------------C------------------------G----------------------------------------------------------TG----------CT-G........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
ATTTAATTAA-AC---GAGAGCAG-------------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGGCGAACTAAATGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CTTTGTTGGTGT-----------GTGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGGTGT-----------GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................GAAAAACACTTTTCATTTAGC---------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAG------------------AACTAAACGTTTGAAGGTT....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CAGCTGTT-CTTTGTTGGTGT-----------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTATGAACAGAC----CCG---------T-----CC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-GCTTTGTATATT-TGTTTT......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATACGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GTGT-----------GTGTGTG----------AT--------TGTG---------------------------------------------------------------------------------------TGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------A.........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AGCTGTT-CTTTGTTGGTGT-----------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AATACCTAACCT..............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGCAG-------------------------------------------------TCTTCGGTTCGAGGC--AA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCAG-------------------------------------------------TCTTCGGTTCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACCTAACCTAAAA-----------AAGGG..........................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................GTTCGAGGC--AATAATAGG---------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droEre2
ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATAGTTTC---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACAAGGCAATAAAAAACACTTTTCATTTAGC---------------------------------------------------------------ATTA-------------------TTG-CT--TTATGCGAAAATACCC---TAAAAACTAAGCGACGCGCAAAAAATATCAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------GTGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGAGCTTTATATGCGGGCGAACTCAATGTGTTTG--------------------------------------------------------------------------------------------------------------TG----------CT-GCTTT-TATATTTTGTTTTTA--------------------T--------------TTTTTTATAT---TTTTTTTAT-TATGTTAAAGTC-----------------------------AAATA-------------------------------------------------------------------G----------------------------------------------AGAACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CTG---------T-----CCCT-C--------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------GTGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000200
.............................................................................................AGTTTC---------------ATTCAAGTAAAGCG---------------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................TT-CTTTGTTGGTGT-----------GTGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------GTGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................CAAACGTCATCAGCTGTT-CTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------GTGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGAGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....ATTAA-AC---GAGAGCAGAG-----------------------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-----------------------------AAATA-------------------------------------------------------------------G----------------------------------------------AGAACCTAACC...............................................................................................................2011.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGAG--------AG--------TGTG---------------------------------------------------------------------------------------TGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000100
droYak3
ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATAGTTTT---------------ATTCAAGTAAAGCG---------------CGATTT------------GAACAAACTT-TTATTTACGACAAGACAATAAAACGCATTTTTCATTTAGC---------------------------------------------------------------TTTA-------------------TTG-TT--TTATGCGAAAATACCT---TAAAAAATAAGAGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGT-----------ATGTGTG---------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGCGAACTAAATGTGCTTGTGT--G--------------------T------------------------G----------------------------------------------------------TG----------CT-GCTTTGTATGTT-TGTTTTTT--------------------T-TTT----------TTTTCTATTT------T-TTA--TAAGTTAAAATC-----------------------------AAATAATTAAATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAAAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAA----ACG---------T-----CCCTGCCCC------CACCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...TAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...........AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........AC---GAGAGCAGAG-----------------------------------------------TCTTCGGTTCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....ATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
ATTTAATTAA-AC---GAGAGCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....ATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................GCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................AGCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................GCAGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
........................................................................................................................................................................................................................................................................................................................................AAAATAAGAGACGCGCACAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................AGAG-----------------------------------------------TCTTCGGTTCGAGGC--AATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGAGGC--AGTAATTTC---------------ATTCAAGTAAAGCG---------------CGATTT------------AAACAAACTT-TTATTTATGATTAGGCAATAAAAAACACTTTTCATTAAGG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAAACT---CAAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGT-----------GTGTATG---------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGAAAATACAGTGCTCTTGTATATG--------------------C------------------------G----------------------------------------------------------TG----------CC-GTTTAATA-----------------------------------T--TTTTTTG--T--------TA---TTTATTCAA-TAAATTGGAATC-----------------------------AAATGATTGCATTTCAGAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------ATCTAACCGTTTGAAGGTTATGAACGGAC----CAA---------C-----CCCT-CCTC-----------SizeHit CountTotal NormTotal
No Reads
droBia1
ATTTAATTAA-AC---GAGAGCAGAC-----------------------------------------------TCTTCGATTCGAGGC--AATAATTTC---------------AGTCAAGTAAATTG---------------CGATTA------------AAGCAAACCT-TTATTTATGCTAAGACCCTAAAAAACCGTTTTCATTTAGG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAACCT------AAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGTTTGTG----------------------------------------------------------------------------------------------------------------------------TGAGCTCTATACACGGGAGAACTCAGTGTGCTCGGAT--G--------------------T------------------------G----------------------------------------------------------TG----------TT-TCCTAGTTAACT-TG----------------------------------------------------------------AAAATCGAAATC-----------------------------AAATGGTTGCATTTAAAAG-TC-----------------------------------------------GTTC----------------------------------------------AAATCCTAACCTG-AA-----------AACCAG------------------AATTATACGTTTGAAGGTTATGAACAGAA----TAG---------C-----CCCT-CTCC--------CTGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTAATTAA-AC---GAGAGCAGAC-----------------------------------------------CCTTCGATTCGAGGC--AATAATTTC---------------ATTCAAGTAAATTG---------------CGATTT------------AAACAAACCT-TTATTTATGCTAAGTTCATAAAAAACAGTTTTCATTTAGA---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATGT----AAAAATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGTTTGTA----------------------------------------------------------------------------------------------------------------------------TGAGCTTTATATGCGGGAGAACCGATTGTGCTTGAGTGTG--------------------T------------------------G----------------------------------------------------------TG----------CT-GCCTT-----------------------------------TTTT--TTCT--------------TATTC---AACAAT-AAAATATAAATG-----------------------------AAATGGTTGCATTTGAAAGTCA-----------------------------------------------GTTA----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------AACTAATCGTTTGAAGGTTATGAACAGAA----TCG---------C-----CCCT-CCCC-----------SizeHit CountTotal NormTotal
No Reads
droEle1
ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGAGGC--AATAATTTC---------------ATTCAAGTAATACG---------------CGATTT------------GAACAAAGCT-TTATTTATGCTAAGGCAATAAAATGCAGTTTTTATTTAAG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATCT----AAAAAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTATGTTTGTGT--GTT----------------------------------------------------------------------------------------------------------------------------TGCGCTCAATAAGCGGGAGAACTTTGTGTGCTTGTGTGTG--------------------C------------------------A----------------------------------------------------------TG----------TT-GTTTT-----------------------------------ATTT--TGTGG--CT---------TATTT---ACTTATTTAAATTGGAATA-----------------------------AAATGATTGCATTTCGAAGGCA-----------------------------------------------GTTG----------------------------------------------AAAACCTAACCTAGAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACAGAC----CCA---------CC----ACCT-CCCC------TTTTASizeHit CountTotal NormTotal
No Reads
droRho1
ATTTAATTAA-AC---GAGAGCAGAG-----------------------------------------------TCTTCGATTCGGGGC--AATAATTTC---------------ATTCAAGTAAATCG---------------CGATTT------------AATCAAAGCT-TTATTTATGCTAAGGCAATAAAATGCAGTTTTCATTTAAG---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCAAAAAAATTT---T-AAAAATAAGCGACGCGCACAAAATAACAAACGTCATTAGCTGTT-CTTTGTTTGTGT--GTT----------------------------------------------------------------------------------------------------------------------------TGGGGTCTATAAGCGGGCGAACTTTGTGTGCTTGTGTGTG--------------------A------------------------A----------------------------------------------------------TG----------TT-GTTTT-----------------------------------ATTT--TTTTTG-CC---------CATTG---ACTTAT-TAAATTGAAATA-----------------------------AAATGATTGCATTTCGAAGGCA-----------------------------------------------GTTG----------------------------------------------AAAATCTAACCTAGAA-----------AACTAG------------------AACTAAACGTTTGAAGGTTATGAACCGAC----CCA---------CT----GCCT-CCCC------TTTCASizeHit CountTotal NormTotal
No Reads
droFic1
ATTTAATTAA-AC---GAGAGCAAAG-----------------------------------------------TCTTCGATTCGGGGC--AACAATTTC---------------ACTCAAGTAAAACG---------------CGATTA------------AAACAAACTT-TTATTTATGCTCAGTTTGTATAAAACCGTTTTCATTTAAA---------------------------------------------------------------ATTT-------------------TTG-TT--TTGTGCGAAAAAATCTAGAAAAAATATAGGCGACGCGCAAGAAATAACAAACGTCATCAGCTGTT-CTTTGTTTGTGT--GTG----------------------------------------------------------------------------------------------------------------------------TGAGTTTGATGTGCGGAAGAAATTTGTGTGCTTGTGTGT-------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------ATTT--TTTGTA------------TAT-----AAATAT-TAA-----ATTT-----------------------------AAGTGATTGCTTTTCAAAGTTA-----------------------------------------------GTTG----------------------------------------------AACACCTAACCTAAAA----------AAATTAG------------------AACTAACTGTTTGAAGGTTATGAACACAA----CCG---------C-----CCCT-CCCC------CTTTTSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTAATTAA-AC---GAGAGCAGAT------------------------------------------------------------AC--AATTATTCCTTCGACGGCGGA--TTTTCAAGTAATTCGCTTTGATT---GTTACGATTT------------AAACGTAGCT-TTATTTATGCTCAAGCCCAGTGCAGTGCTTTTCATTAAAG---------------------------------------------------------------ATTT-------------------CTG-TT--TTGTGCGAAAAAATCT---T-AAGAATAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-TGCTGTTTGTGT-----------GCGTATG----------ATTTTGAGAGTGTG---------------------------------------------TGGG--------------------------------------TGTGCTTTATTTGCGGGAGAATTTT---------------------------------------------------------------------------------------------TTCCTTAACTTTGT-----------------------------------------------ATGTGTACATATATGTTTTTTTTT--CTTGC---T---------TTCCT---ATTTAA-TAAATGAAAATC-----------------------------AAATGAGTGCACTTGAAGG------------------------------------------------------------------------------------------------------TACCTAACCTAGAA-----------AACGGG------------------GACTAAACCTTTGAAGGTTACGGCTG--C----CAG---------C-----CCCT-CCTCCT----TGCCASizeHit CountTotal NormTotal
No Reads
droAna3
ATTGAATTAAAAC---AAGAGCAGGAG-GC-AACTTCAAATTAATACAAT--------ATCATCGGCGT-----------------------ATATTTCTG--GTGCGGTT--ATTTCAAGTAAATCA---------------CAAATTATTCGATATTTGAAACGGGCCT-TTATTTATGGCAGAGCGATGGCCTAAGTTTTTCATTTAACAAAAC-A-----------------ATG------------------------------------ATAT-------------------TTGTTT--TTGTGCGAA--------------AATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGTTTGTG-----------GG----AGCATCAG------------------------------------------------------------------------------------------------------------TGTGCG-----------TGTGTTTGTGTGTG--------------------TGTGTGAGAGAGAGA----------------GTGAAAAGTAGAGATGTGGAAGAACTTTTCGATAAGTTTCGGGGTGGG-GGGGAG----------CT-GCTTT-----------------------------------CTTT--TTTGTA-CA---------AGT-T---A-TTATTTAA-----AATT-----------------------------CAATCAT-----------GAAA-----------------------------------------------GTCG----------------------------------------------TAAACATAACCTAGAA-----------ATCTAG----------------GAAACTGGCCGTTTGAAGGTTATGGC-AGATACGGCAC--CG-----T-----AC---CCCC------CTCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........AAAAC---AAGAGCAGGAG-GC-AACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002010100
.......TAAAAC---AAGAGCAGGAG-GC-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.....ATTAAAAC---AAGAGCAGGAG-GC-AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
..TGAATTAAAAC---AAGAGCAGGAG-GC-A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTGTG-----------GG----AGCATCAG------------------------------------------------------------------------------------------------------------TGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.........................................................................................................................................................................CT-TTATTTATGGCAGAGCGATGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.........AAAC---AAGAGCAGGAG-GC-AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
ATTTAATTAAAAC---AAGAGCAGGAG-GC-AACTTCAAATTAATACAGT--------ATCATCGGCGA-----------------------ATATTTCTG--GTGCGGTT--ATTTCAAGTAAATCA---------------CAAAATTATCGGTATTTGAAACGGGGCT-TTATTTATGGCAGCCCGATAACTTTAGTTTTTCATTTAACAAAAC-A-----------------ATG------------------------------------ATTT-------------------TTGTTT--TTGTGCGAA--------------AATTAAGCGACGCGCACAAAATAACAAACGTCATCAGCTGTT-CTTTGTTGGTGTTTGTG-G----GGGGGCG----AGCATGAG------------------------------------------------------------------------------------------------------------T-------------GTGTATGCGTGTATGTGTGTGTGA--------------------------GA----------------GTGAATAGTACATATGTGGAAGAACTTTTCGATAAGGTTGGGGGGGGGAGGGGTG----------CT-GCTTT-----------------------------------CTAT--TTTGTA-CA---------AGT-T---A-TTATTTAA------------------------------------------AATTGTATCATAA---AA-----------------------------------------------GTCG----------------------------------------------TAAACATAACCTAGAA-----------ATCTAG----------------GAAACTGGCCGTTTGAAGGTTATGG-CAGAA----ATA---------C-----CCCT-CTCC-T----CACTGSizeHit CountTotal NormTotal
No Reads
dp5
ATTAAATTAA-AT---AAGAGCAGAGCGGCCGAGC------------ACTGTGACTGCGAGTGCAATTCGATTTCTTCGATTCAAGTA--AATACTTTA---------------GT-------------------T---GAGAC-----------TATTTCAGGCGGGGCT-TCATTAATGCCCCTTGCAGGTGCATCAGTTTTCATTTAGGAAATG-GAT--AAA-TAAAATT----------CC---------------------------GCTATGCC-AT---TTCCTCCACAAC-ACTT--TTTTGC----------------AAAATAGTCGACGCGCACAAAATAACAAACGTCATCAGCTGTTTCTTTAACTGTGA-----------GTGTGTGCGAGCGTATGGCTGT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------TACGTGCGGTAGCGAGTCTGTTAGTGTG---------------------------------------TTT-------------GG--------------GTTTTGTACACT-TTTCGTT--------------------------------G--T--------TG---TTTTTTCGT-CGAAA-----TGAAAAAAGTGGACAAATAGAAAAAAACAAAAATTGATTGCATCT----------------------------------------------------------------------------------------------------------AAACCTAACCTAGAAACGGAATTGAAAACGAG------------------AATTGGTTGTTTGAAGGTTATGGCGATGC----CAT---------T-----GCCT-CGAC------CACCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................TAACTGTGA-----------GTGTGTGCGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGTTAGTGTG---------------------------------------TTT-------------GG--------------GT.......................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................GAGC------------ACTGTGACTGCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAAGGTTATGGCGAT............................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................CAAAATAACAAACGTCATCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................A-----------GTGTGTGCGAGCGTATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
..........................CGGCCGAGC------------ACTGTGACTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------TACGTGCGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................GGCCGAGC------------ACTGTGACTGCGAGTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................TCATCAGCTGTTTCTTTAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..........................................................................CTTCGATTCAAGTA--AATACTTTA---------------GT-------------------T---G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGAGCGTATGGCTGT--------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
ATTAAATTAA-AT---AAGAGCAGAGCGGCCGAGC------------ACTGTGACTGCGAGTGCGATTCGATTTCTTCGATTCAAGTA--AATACTTTA---------------GT-------------------T---GAGAC-----------TATTTCAGGCGGGGCT-TCATTAATGCCCCTTGCAGGTGCATCAGTTTTCATTTAGGAAATG-GAT--AAA-TAAAATT----------CC---------------------------GCTATGCC-AT---TTCCTCCACAAT-ACAT--TTTTGC----------------AAAATAGTCGACGCGCACAAAATAACAAACGTCATCAGCTGTTTCTTTAACTGTGA-----------GTGTGTGCGAGCGTATGGCTGT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------TACGTGCGGTAGCGAGTCTGTTAGTGTG---------------------------------------TTT-------------GG--------------GTTTTGTACACT-TTTCGTT--------------------------------G--T--------TG---TTTTTTCGT-CGAAA-----TGAAAAAAGTGGACAAATAGAAAAAAACAAAAATTGATTGCATCT----------------------------------------------------------------------------------------------------------AAACCTAACCTAGAAACGGAATTGAAAACGAG------------------AATTGGTTGTTTGAAGGTTATGGCGATGC----CAT---------T-----GCCT-CGAC------CACCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................GTA--AATACTTTA---------------GT-------------------T---GAGAC-----------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.002200000
..............................CGAGC------------ACTGTGACTGCGAGTGCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGT--------G-------------------------------TGCAAGA------------GTG---------------------------------------TG-----------------------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTT--------------------------------G--T--------TG---TTTTTTCGT-CGAAA-----T...............................................................................................................................................................................................................................................................................2620.501100000
...............................................................................................................................................................................................................................................................................................................T--TTTTGC----------------AAAATAGTCGACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGTAGCGAGTCTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000010
................................................CTGTGACTGCGAGTGCGATTCGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
....................................................................CGATTTCTTCGATTCAAGTA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
.................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTAACTGTGA-----------GTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
droWil2
ATTAAATTAA-AAAGCAAGGAAAGAAG-GA-AAAAACAGG---------AGCCACAGCGCCAGCAATTG-----------------------ATATACCTT--------AAATAATCAAAGTAAATTA-ATTGATT---TAATCAATTT-----------AATCGAAAGCT-TTATTAATCAACGAATTTAAATTACAACTTTTCATTTAACAAAAA-A-----------------A---------------------------------------------------------------------------GAA--------------AATAATTCAGCGCGCAGAAAACAACAAACGTCATCAGCTGTT-CTACT---G--------------------------------------------------------------------------------------TACCTACATACATATATAAATACTTATGTATAGTACGTGCGTTTGT-----------------------------GTGTGTGT--G--------------------TGTGTTACAGATAGA----------------GT-----------------------------------------GAGAGAGGGGCAGTTCTCTCTGTTGGCTTTGTTTGTT-TGTTTGTGCGTGTATAA-AATGAATTAATTT--TTTGTA------------CATTT---ATTT----A---------------------------------------AAATA-------------------------------------------------------------------G----------------------------------------------AAAATTTAACG--------------------AACATTGGGGTTATTCTATAGATTGTAATTTTGAAGGTTATGATGAGC----------------------------CCCC------CATCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................AGAAG-GA-AAAAACAGG---------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
..............GCAAGGAAAGAAG-GA-AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTT-TGTTTGTGCGTGTATAA-AATGAA....................................................................................................................................................................................................................................................................................................................................2811.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGATAGA----------------GT-----------------------------------------GAGAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........A-AAAGCAAGGAAAGAAG-G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................CAACAAACGTCATCAGCTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------------------------------------GAGAGAGGGGCAGTTCTCT...............................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................AAACAGG---------AGCCACAGCGCCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTACGTGCGTTTGT-----------------------------GTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..........................G-GA-AAAAACAGG---------AGCCACAGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....ATTAA-AAAGCAAGGAAAGAAG-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................CAACGAATTTAAATTACAACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------TGTGTTACAGATAGA----------------GT-----------------------------------------GAG...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...............................AAAAACAGG---------AGCCACAGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTTTGT-----------------------------GTGTGTGT--G--------------------TGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
droVir3
AATTAATTAA-AC---AAGAGCAGTACG-------------------------AGTTCGATTGCG--------ATTTCGATTCACCGTTCG-A-------TTGTTGGTGAA--ATTCAAAGTAAATTG-TTTAATAAAT--AAA-----------TATTTTATATTGTGCT-TAATTAATGCGCCAATTCGGTGTTGAAGTTTTCATTTAACAAAACGC-C--AAAATCAAATTCAACGACATTTTGTT---------------TTTCGTTTTGCTTTG-------------------CCG-TTTTATTTGC----------------AAAATAATCACTGCGAACAAAATAACAAACGTCATCAGCTGTT-TTGTGCTTGTCG--ACTTTGTGTGTGTGTGTG--------G----------------------------------------------------------------------------------------------------------------------------------TGTGTGT--G--------------------T------------------------G----------------------------------------------------------TG----------CT-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........AA-AC---AAGAGCAGTACG-------------------------AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000001000000000000000010000000000000000000000000000000000000
......................AGTACG-------------------------AGTTCGATTGCG--------ATTTCGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................GTTCGATTGCG--------ATTTCGATTCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........................CG-------------------------AGTTCGATTGCG--------ATTTCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
......................................................GTTCGATTGCG--------ATTTCGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.ATTAATTAA-AC---AAGAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
........AA-AC---AAGAGCAGTACG-------------------------AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................TAACAAACGTCATCAGCTGTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
........AA-AC---AAGAGCAGTACG-------------------------AGTTCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.ATTAATTAA-AC---AAGAGCAGTACG-------------------------AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................TGCTTTG-------------------CCG-TTTTATTTGC----------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTTGCTTTG-------------------CCG-TTTTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.......................GTACG-------------------------AGTTCGATTGCG--------ATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
....AATTAA-AC---AAGAGCAGTACG-------------------------AGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..................GAGCAGTACG-------------------------AGTTCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................G--ACTTTGTGTGTGTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.222000000000000000000000000000001010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG--------G----------------------------------------------------------------------------------------------------------------------------------TGTGTGT--G--------------------T------------------------G----------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
ATTAAATTAA-AC---AAGAGCAGTACG-------------------------AGTTTGATTGCG--------ATTTCGATTCACCGATTA-A-------TTATTGGTGAA--ATTCAAAGTAAATTTATTTTATAGATGAAA------------AATTTTAAATGGTGTTTTAATTAATGCGAAGATTCAATGTTTAAGTTTTCATTTAACAAAACGC-C--AAAAAAAGACTCAACGACATTTTGTT---------------TTTCATTTCGCTTTGCC-GT------------------TTTTATTTGC----------------AAAATAATCAGCGCGAACAAAATAACAAACGTCATCAGCTGTT-CTGTGCCAGTGT-----------GTGTGTCCG------------------TGTGTATGCTTAAGTTGCTTCCACATACGTATGTATGTTTGAGTGTACGTACGTATATGTGTAAATATGGAACTGTATTATATACATTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCTACATATAACTG--TATTT--CGCGC---TT--------TG---TTT-----------------TT-----------------------------AAATAAAAGCGTTAAAAA-GCGGTATAAAATATTACAGGAAATATATATTCATATGTATATGTATAAAAATTGTTGCACTCAGCCTCCCGTCTTACGCCCCCTTAATATTTTGCTACGTGAAACATAACCTACAAGCGCAT-TTAGAATGAG------------------AACT---TGTTTGAAGGTTACGACGCGGC----GCCACGAAACACCCCCAATCCT-CGCGTTTGGGAACGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTTAATTAAAAC---AAGAGCAGTTCG-------------------------AGTTCGATTGCGATTCCAATTCTCCGATTT---------A-------TTGTTGCTGAA--ATTCAAAGTAAATTA-TTTCATT---GATCA-----------AATTTCAAATGGTGCT-TAATTTATGTACATTTGCGTTGTTTTAATTTTCATTTATCAAACA-C-CTTAAA-TGACTTT----------TCGTTGTTGTTGTTTTTTTCTTCCGATTTTCTTTGCCCGTTTTTTTTTTTTTTTTTT-TT--TTTTGCAAAAA----------------AATCACCGCGAACAAAACAACAAACGTCATCAGCTGTT-CTGTGCTTGTGGTTAGTTGGTGTGTATGTGTGTACATA--TC--------TGTG---------------------------------------------------------------------------------------TGTGTC-----TAC-----------------------------GTCGAAATGCATATGTATATGTGCATTAATGCGTGTGTGTATGTGTGAA----------------------------------------------------TG-------------------------------------------------------------------------------------------------------C-----------------------------AAATACT---------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------ATGC-----------ATTT----TAT---------T-----GTAT-ATAT------TTTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:37 AM