ID:

dsi_7848

 Coordinate:

2r:17929664-17929827 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_17929828_17930015_-]; CDS [2r_17929828_17930015_-]; CDS [2r_17929484_17929663_-]; exon [2r_17929002_17929663_-]; intron [2r_17929664_17929827_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACCTATATGTCTCTCTACACTGAAATATCCGTTGGATGTGGGATAAGTTACTAACCAACCACCCTACACTTTCTGTAGATATATAAAGTATCTGCAATTAAATTAATGTTGGATATTATTTTTGTTCTATAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTC
**************************************************..........((((((((...(((....)))...))))))))...((((.((.((....)).))))))(((((((((((.((.((.(((((..............(((((((((.....)))))))))...........))))).)).))..))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR1275487
Male larvae		 SRR553485
Chicharo_3 day-old ovaries
....CAAGGAGATCGACGATAATGC............................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.CTTCAAGGAGATCGACGATAATGCC.............................................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGACCGCCGTGGAGGGAC....... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................AGATGACCGCCGTGGAGGGAC....... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..TTCAAGGAGATCGACGATAATGCC.............................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....CAAGGAGATCGACGATAATGCCG............................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TCTTTAGGTCAGCGAGTATGTCA.................................. 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0
...TCAAGGAGATCGACGATAAT................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..TTCAAGGAGATCGACGATAAT................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.CTTCAAGGAGATCGACGATAATGC............................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GCAGATGACCGCCGTGGAGGGAC....... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....CAAGGAGATCGACGATAATGCC.............................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................TGAGTCGCGAAGAGGTCAGCGA.............................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0
..TTCAAACAGATCGACGATATT................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0
.............................................................TGTGTGGATCGCACT............................................................................................................................................................................................ 15 1 5 0.40 2 0 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................................................GTGGAAGGACAGGAT.. 15 1 4 0.25 1 0 0 0 1 0 0 0 0 0
............................................................................................................AGCCGTTGGACGTGGGTTA......................................................................................................................................... 19 3 18 0.11 2 0 0 0 0 0 0 0 2 0
...........................................................TTTGTGTGGATCGCACT............................................................................................................................................................................................ 17 2 10 0.10 1 0 0 0 1 0 0 0 0 0
..................................GCTGAGTCGTGGAGAGG..................................................................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................TAAAGAAGCAGATGA...................... 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1
.............................................................................................................TCCGTTAGATGTGGGAC.......................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................ACTATCGACCCACCCTACA.................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0
.................................AGCAGAGTCGCGCAGAG...................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 1 0 0
................................................................................................................GTTGGATGTGGGTTA......................................................................................................................................... 15 1 18 0.06 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................GTGGGACAAGTTACTAGCA.............................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................TTTGGATGTTATTTTTGATC....................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0
....CAAGGAGATCGACGG..................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AGAAGTTCCTCTAGCTGCTATTACGGCTGTTCGTCGACTCAGCGCTTCTCCATTAGCAGATACATACCTAGCGTGAAAACAATGGATATACAGAGAGATGTGACTTTATAGGCAACCTACACCCTATTCAATGATTGGTTGGTGGGATGTGAAAGACATCTATATATTTCATAGACGTTAATTTAATTACAACCTATAATAAAAACAAGATATCCAGTCGCTCATAGACTTCTTCGTCTACTGGCGGCACCTCCCTGTCCTAAG
**************************************************..........((((((((...(((....)))...))))))))...((((.((.((....)).))))))(((((((((((.((.((.(((((..............(((((((((.....)))))))))...........))))).)).))..))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M024
male body
..............................................................................................GAGATGTGACTTTATAGGCAA..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................AGCGTGAAGACTATGGA.................................................................................................................................................................................. 17 2 13 0.77 10 0 5 0 3 2 0 0
..........................................................GATACATACCTAAGGTGA............................................................................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 1 0
.......................................................................................ATACAGAGGGATGTGA................................................................................................................................................................. 16 1 4 0.25 1 0 0 1 0 0 0 0
.........................................................AGAAACTTACCTAGCGTG............................................................................................................................................................................................. 18 2 5 0.20 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................ACCACCCTGTCCTAA. 15 1 5 0.20 1 0 0 0 0 1 0 0
.....................................................................................................................................ATTGGTTGGGGGGAT.................................................................................................................... 15 1 5 0.20 1 0 0 0 1 0 0 0
.........................................................................................ACAGAGTGCTGTGACT............................................................................................................................................................... 16 2 20 0.15 3 0 0 3 0 0 0 0
.....................................................................AGCGTGAAGACTATGG................................................................................................................................................................................... 16 2 20 0.10 2 0 2 0 0 0 0 0
....................................................................................................................................................................................................................TCCAGTCGCTCACAG..................................... 15 1 11 0.09 1 0 1 0 0 0 0 0
.........................................................................................ACAGAGTGCTGTGACTGTA............................................................................................................................................................ 19 3 12 0.08 1 0 0 1 0 0 0 0
..................................................................................................................................................................TGTATTTCATAGACGT...................................................................................... 16 1 12 0.08 1 0 0 1 0 0 0 0
.................CGATTCCGGCTGTTCG....................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0
.................................................................................ATGGATAGACAGAGA........................................................................................................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0 0
......GCCCCTAGCTGCTATT.................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0
...........................................................................................................................CTATCCAAGGATTGGT............................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................CCAGAGTAAAAACAAGATA.................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:17929614-17929877 - dsi_7848 TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACCTA-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCAACCAC--------------------------------CCTACACTTT----------C---TGTAG---------------------A-----------------------TATATAAAG-TA----T------------C---------TG--CAATTA--AATTA--ATGTTGGATATTA-------------------------------TTTTT--GTTCTATAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTC
droSec2 scaffold_9:705150-705422 - TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACCTA-T--------------------------------------------------ATG----CCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCAACCAC--------------------------------CCTACACTTT----------C---TGTAG---------------------AC---TAG-----AGCAA------TATATGAAG-TG----T------------C---------TG--CAATTA--AATTA--ATTTTGGATATTA-------------------------------TCTCT--GCTCTATAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTC
dm3 chr2R:17375301-17375573 - TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACATA-T--------------------------------------------------A--CATGTCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCA----G--------------------------------CCTATGCTTT----------C---AGTAG---------------------AC---TAG-----AGCAA------TATATAAAG-TA----G------------C---------TA--CAATTA--AATTA--ATGCTGGATATTATA-----------------------------TCTCT--CCTCTAAAGGTCAGCGAGTATCTAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTC
droEre2 scaffold_4845:11520077-11520360 - TGTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------ATG----ACTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ACAA-GTTACTAACCC--T-------AG-G-------------TCGAAATATGCGTACACTTC----------C---CGTAG---------------------AT---TAG-----AGCAA------TATT-----------------TAAACTATT-----TT--TA--CAAGCA--AACTC--ATTTTGAATGTCA-------------------------------TTTAT--GCGCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGACAGGATTC
droYak3 2R:11804571-11804858 + dya_543 TGTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTATATA-T--------------------------------------------------A--CATGTCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------AACA-GTTACTAACCC--T-------AA-G-------------GCAAAATATCACTACACTTT----------C---TGTAG---------------------AT---TAG-----AGCAA------TA-----------------ATTCAACTATT-----TC--CA--TAAGTAAGAACTA--ATTTGTGGTATTG-------------------------------TTTAT--GCGCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTC
droEug1 scf7180000409474:559060-559325 + TCTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCAGCTATGTATGGATCGCACTTTTGATATATA-A--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACCC--T--T----GA-------------------------CCTATACTTT----------C---GTTTT---------------------GC---TAA-----CACAC------ATTATTAAGATGGCATA-----------------------------CTA--ACTTA--ACTT---AACTTA-------------------------------TCTT----TCCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGCCAGGACTC
droBia1 scf7180000302143:1012511-1012648 + TCTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------CTG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415722:292991-293128 - TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATT-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491201:1751983-1752120 + TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780066:339522-339658 - TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTATATA-T--------------------------------------------------ATA----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-AATACTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453201:186129-186418 + TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTTT-TTATA-T--------------------------------------------------ATA----T-TCTCTTCAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTAACTAACCC--C--T----AA-CCT-----------GAAAAATATGAT----CCTT----------C---TTT---------------------CCTC---TAAAACAGA----------------AGA--T----ATCTCTTATATATT-----TT--AAACCAAGTT--AACTA--ACTCCA--ATTT---TTTTA------------------------TTTT---TCCCCACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGCCAGGACTC
droKik1 scf7180000302411:641164-641311 - TCTTCAAGGAGATCGATGAGAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-TATATTCC-------------------------------------------ATGTCTA-CTCTCTACAC---TGAAATATCCGTTGG-GTTT-GGT-----T----------------------ACAA-GTTACTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:5203955-5204224 - TCTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTCTTTCAAA-T--------------------------------------------------ATC--TG-CTCTTCAAAC---TGAAATATCCGTTGG-TCCA-GGGTCACCT----------------------ACAA-CTAACTAACTA--A--T----A--------------------------ATTATACCTT----------C---TTCAC---------------------AC---TCC-----TATAT------CCTATAAGG------------------------------------ACTA--AACTA--ATTCTATAATTTA-------------------------------TTAAC--CCTTCCCAGGTCAGTGAATATTTGAAGAAACAGATGACTGCTGTGGAGGGCCAGGACTC
droBip1 scf7180000395751:993166-993429 - TCTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACATA-TCTCCTC--------------------------------------------CTC----CCTCTCTTCAC---TGAAATATCCGTTGG-GTCAAGGG----------------------------TCAA-ACTACTAAA--------------------------------A------GCTATACCTT----------CCTCTCTAGAGATAGTAT-------------------------------CTTTG----TAAGG------------------------------------ATTA--GACTA--AAGGTGGTTATTG-------------------------------TC-------CTTGCAGGTCAGCGAATACCTGAAGAAACAGATGACCGCCGTCGAGGGCCAGGACTC
dp5 3:15660901-15661179 - TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGAATATGTATGGATCGCACTTTGATTACG-A-T--------------------------------------------------ATGTCTGTCTC-CTACACTCATGAAATATCCGTTGG-GTTT-GGGCCACAC--G-------------------CTAATGTTACTAACCC--C--C----A------------------------------------------------------AAGAAAGCCTCTTCTTTTGTCCTC---CA-----------ACTATG----AAAGG--A----ATCGCTGAACTATA-----TCCC----------------------------------TGTCACT--------------------GT-T------TTCCGTAGGTGAGCGAGTATCTGAAGAAGCAGATGACGGCCGTGGAGGGCCAGGACTC
droPer2 scaffold_4:3392410-3392688 + TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGAATATGTATGGATCGCACTTTGATTACG-A-T--------------------------------------------------ATGTCTGTCTCT-TACACTCATGAAATATCCGTTGG-GTTT-GGGCCATAC--G-------------------CTAATGTTACTAACCC--C--C----A------------------------------------------------------AAGAAAGCTTCTTCTTTTGTCCTC---CA-----------ACTATG----AAAGG--A----ATCGCTGAACTATA-----TCCC----------------------------------TGTCACT--------------------GT-T------TTCCGTAGGTGAGCGAGTATCTGAAGAAGCAGATGACGGCCGTGGAGGGCCAGGACTC
droWil2 scf2_1100000004510:1695143-1695451 - TGTTCAAGGAGATCGATGAGAATGCCGATAAGCAATTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCAAACCTTTTTTTTGCA-C-------------ATCTTA----------------------TATAGATATA--GATATCT-TCTACAAT-GTGATATATCCTTGGGCATAT-GGGC-AAATATGTACATACATACTTACCAAAACAA-CTAACTAACCA----GC----A--------------------------ATTTCACCTTAACATTGATTTCTCTTTAA---------------------AC------------------------------------------------------------T----------------------------------TGTCACTAATTGTCTATAATTTCCTTCGA-TT-----TCGAACAGGTCAGTGAATATCTGAAGAAACAAATGACCGCTGTGGAGGGTCAGGATTC
droVir3 scaffold_12875:17834547-17834854 + dvi_7609 TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTATCATT-T-TAT--TTATACTACACTCTATGTATATATATATATATGTGTATAT------A-----------------T-GTGATATATCCGTGGG--TAT-CGG----------------------------TT-C-GTTACTAACCT--CA-------TTCTTC-------------------------ACTTT----------T---T----------------------TATTTTTACT-----------ATTTTT-------TAAA-TCATATTCCTAACTTGTTCTTAT----------------TACTTATTTTTTGCACTTAA-------------------------------CTCA---CCTGCTCAGGTTAGCGAATATCTGAAGAAACAAATGACTGCCGTGGAGGGCCAGGACTC
droMoj3 scaffold_6496:11458722-11458995 + TGTTCAAGGAGATCGATGAGAACGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTATCATTTT-G-TAATTGTTCTACAC----------------------------------------------TCTATA-T-GTGATATATCCGTGGG-TCTC-GGT------------------------------TC-GTTACTAACCT--CA-------TTCTTCATAATGCTCTAATT------GCTATGCC------------------------------------------------------------------------CTG-TA----A------------T---------TG--CTATAA--TATGT--CGGTTGGTTTGTTTC----G------------------------TTTG---TCTGTTTAGGTCAGCGAATATCTGAAGAAACAGATGACCGCTGTGGAGGGTCAGGACTC
droGri2 scaffold_15245:13858533-13858809 - TGTTCAAGGAGATCGATGAGAATGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACATTTATCAGT-ATTGTTTTAGTTGTACACTCTA----------------------TAT------A-----------------T-GTGATATATCCGTGGG--TAT-CGG----------------------------TTTG-GCTACTAACCA--C--CTCATATTCTTCAT-----------------------------------------------------------------ATTTG---CA-----------ACATCA-------AAAT-GCATATTCCTAACCGATT-----TACC----------------------------------TCTCTTT--------------------GC-TTGTGAACGGCTTAGGTCAGTGAATATCTGAAGAAGCAAATGACGGCTGTGGAGGGTCAGGATTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACCTA-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCAACCAC--------------------------------CCTACACTTT----------C---TGTAG---------------------A-----------------------TATATAAAG-TA----T------------C---------TG--CAATTA--AATTA--ATGTTGGATATTA-------------------------------TTTTT--GTTCTATAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....CAAGGAGATCGACGATAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
.CTTCAAGGAGATCGACGATAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCGCCGTGGAGGGAC.......1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCGCCGTGGAGGGAC.......2111.00110000000000000000
..TTCAAGGAGATCGACGATAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
....CAAGGAGATCGACGATAATGCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...TCAAGGAGATCGACGATAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..TTCAAGGAGATCGACGATAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.CTTCAAGGAGATCGACGATAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGACCGCCGTGGAGGGAC.......2311.00100100000000000000
....CAAGGAGATCGACGATAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
....CAAGGAGATCGACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000100000000
droSec2
TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACCTA-T--------------------------------------------------ATG----CCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCAACCAC--------------------------------CCTACACTTT----------C---TGTAG---------------------AC---TAG-----AGCAA------TATATGAAG-TG----T------------C---------TG--CAATTA--AATTA--ATTTTGGATATTA-------------------------------TCTCT--GCTCTATAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATGACCGCCGTGGAGGG.........2211.0010010
...................TAATGCCGACAAGCAGCTGAGTCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
....CAAGGAGATCGACGATAATGCCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.................................AGCTGAGTCGCGAAGAGGTAATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
..............GACGATAATGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
.............................AAGCAGCTGAGTCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCGCCGTGGAGGGACAGG....2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGCCGTGGAGGGAC.......2011.0010001
...TCAAGGAGATCGACGATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............ACGATAATGCCGACAAGCAGCTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
..........................GACAAGCAGCTGAGTCGCGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
dm3
TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACATA-T--------------------------------------------------A--CATGTCTCTCTACAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTTACTAACCA----G--------------------------------CCTATGCTTT----------C---AGTAG---------------------AC---TAG-----AGCAA------TATATAAAG-TA----G------------C---------TA--CAATTA--AATTA--ATGCTGGATATTATA-----------------------------TCTCT--CCTCTAAAGGTCAGCGAGTATCTAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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................................................AGGTAATCGTCTATGTATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................AGCTGAGTCGCGAAGAGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAAAGAAGCAGATGACCGCCGTG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATGACCGCCGTGGAG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGATGACCGCCGTGGAGTT.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAAAGAAGCAGATGACCGCCGT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACCGCCGTGGAGGGAC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGACCGCCGTGGAGG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACCGCCGTGGAGGGAA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCGCCGTGGAGGGACAGGA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCAGATGACCGCCGTGGAGGG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
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............................................................................................................................................................................TGG-ATGT-GGG----------------------------ATAA-GTTACTA...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCGCCGTGGAGGGT........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................T----------C---AGTAG---------------------AC---TAG-----AGCAA------TATAT...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................AATCGTCTATGTATGGATCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGACCGCCGTGGAGGGACA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCAGATGACCGCCGTGGA............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................TATGGATCGCACTTTTGTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTTCAAGGAGATCGACGATAATGCCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAGAAGCAGATGACCGCCGT...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCGCCGTGGAGGG.........1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATGACCGCCGTGGAGGGAC.......2411.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACCGCCGTGGAGGG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GATAATGCCGACAAGCAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCTAAAGAAGCAGA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACAAGCAGCTGAGTCGCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCAGATGACCGCCGTGGAGG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGATGACCGCCGTGG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................AGCTGAGTCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................TAG-----AGCAA------TATATAAAG-TA----G------------C---------.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTGGAGGGACAGGATT.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................GTAATCGTCTATGTATGGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TCTACAC---TGAAATATCCGTTG.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................C---TAG-----AGCAA------TATATAAAG-TA----G------------...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACCGCCGTGGAG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TATGGATCGCACTTTTGTTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.GTTCAAGGAGATCGACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGTATCTAAAGAAGCA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAAGCAGATGACCGT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTCAAGGAGATCGACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTTCAAGGAGATCGACGATAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------ATG----ACTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ACAA-GTTACTAACCC--T-------AG-G-------------TCGAAATATGCGTACACTTC----------C---CGTAG---------------------AT---TAG-----AGCAA------TATT-----------------TAAACTATT-----TT--TA--CAAGCA--AACTC--ATTTTGAATGTCA-------------------------------TTTAT--GCGCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGACAGGATTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................AGCAGCTGAGTCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAGCAGATGACCGCCGTCGA............2611.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGCAGATGACCGC..................2211.0010000100
......................................................................................................................................................................................................................................................................ATGCGTACACTTC----------C---CGTAG---------------------AT---...........................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGAAGCAGATGACCGCC.................2311.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAGCAGATGACCGCC.................2111.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCAGATGACCGCCGTCGAGG..........2611.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTCGAGGGACAGG....2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTCGAGGGACAT.....1911.0011000000
.......GGAGATCGACGATAACGCCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........................GACAAGCAGCTGAGTCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTATCTGAAGAAGCAGA.........................2111.0011000000
..............................................AGAGGTAATCGTCTATGTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................ATATCCGTTGG-ACGT-GGG----------------------------ACA....................................................................................................................................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAGCAGATGACCGCCGTCGAGG..........2811.0010100000
.................GATAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTCGAGGGACA......1811.0011000000
.............................AAGCAGCTGAGTCGCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
droYak3
TGTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTATATA-T--------------------------------------------------A--CATGTCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------AACA-GTTACTAACCC--T-------AA-G-------------GCAAAATATCACTACACTTT----------C---TGTAG---------------------AT---TAG-----AGCAA------TA-----------------ATTCAACTATT-----TC--CA--TAAGTAAGAACTA--ATTTGTGGTATTG-------------------------------TTTAT--GCGCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....CAAGGAGATCGACGATAACGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400000040000
.................GATAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000030000
...TCAAGGAGATCGACGATAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAGTATCTGAAGAAGCAGAT........................2412.00201000010000
............................CAAGCAGCTGAGTCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATGACCGCCGTGGAGGG.........2211.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGAGTATCTGAAGAAGCAGAT........................2611.00100000010000
..............GACGATAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..........................GACAAGCAGCTGAGTCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTGGAGGGACAGGAT..2211.00100000010000
.................................AGCTGAGTCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................GCCGACAAGCAGCTGAGTCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....CAAGGAGATCGACGATAACGCCGACAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...TCAAGGAGATCGACGATAACGCCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
....CAAGGAGATCGACGATAACGCCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......GGAGATCGACGATAACGCCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.................GATAACGCCGACAAGCAGCTGAGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCTGAAGAAGCAGAT........................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAGCAGATGACCGCCGTGGAG...........2711.00100000010000
..........................GACAAGCAGCTGAGTCGCGAAGAGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGATGACCGCCGTGG.............1911.00101000000000
......AGGAGATCGACGATAACGCCGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCAGATGACCGCCGT...............2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCAGATGACCGCCGTGGAGG..........2611.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGATGACCGCCGTGGAGG..........2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCCGTGGAGGGACA......1811.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTATCTGAAGAAGCAGATGA......................2311.00100000010000
.................GATAACGCCGACAAGCAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCGCCGTGGAGG..........1811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAGCAGATGACCGCCGTGGAGGG.........2911.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAGTATCTGAAGAAG.............................1930.33100000010000
droEug1
TCTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCAGCTATGTATGGATCGCACTTTTGATATATA-A--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACCC--T--T----GA-------------------------CCTATACTTT----------C---GTTTT---------------------GC---TAA-----CACAC------ATTATTAAGATGGCATA-----------------------------CTA--ACTTA--ACTT---AACTTA-------------------------------TCTT----TCCTACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGCCAGGACTCSizeHit CountTotal NormTotal
No Reads
droBia1
TCTTCAAGGAGATCGACGATAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------CTG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATT-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-T--------------------------------------------------ATG----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-GTTACTAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTATATA-T--------------------------------------------------ATA----TCTCTCTACAC---TGAAATATCCGTTGG-ACGT-GGG----------------------------ATAA-AATACTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGTTCAAGGAGATCGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTTT-TTATA-T--------------------------------------------------ATA----T-TCTCTTCAC---TGAAATATCCGTTGG-ATGT-GGG----------------------------ATAA-GTAACTAACCC--C--T----AA-CCT-----------GAAAAATATGAT----CCTT----------C---TTT---------------------CCTC---TAAAACAGA----------------AGA--T----ATCTCTTATATATT-----TT--AAACCAAGTT--AACTA--ACTCCA--ATTT---TTTTA------------------------TTTT---TCCCCACAGGTCAGCGAGTATCTGAAGAAGCAGATGACCGCCGTCGAGGGCCAGGACTCSizeHit CountTotal NormTotal
No Reads
droKik1
TCTTCAAGGAGATCGATGAGAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTTTATA-TATATTCC-------------------------------------------ATGTCTA-CTCTCTACAC---TGAAATATCCGTTGG-GTTT-GGT-----T----------------------ACAA-GTTACTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TCTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTCTTTCAAA-T--------------------------------------------------ATC--TG-CTCTTCAAAC---TGAAATATCCGTTGG-TCCA-GGGTCACCT----------------------ACAA-CTAACTAACTA--A--T----A--------------------------ATTATACCTT----------C---TTCAC---------------------AC---TCC-----TATAT------CCTATAAGG------------------------------------ACTA--AACTA--ATTCTATAATTTA-------------------------------TTAAC--CCTTCCCAGGTCAGTGAATATTTGAAGAAACAGATGACTGCTGTGGAGGGCCAGGACTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACTGCTGTGGAGG..........1912.002100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGACTGCTGTGGAGGGC........2112.002100010
............................CAAGCAGCTGAGTCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................GCAGCTGAGTCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...............ACGAGAACGCCGACAAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAAACAGATGACTGCT.................2111.001000001
................................CAGCTGAGTCGCGAAGAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............GACGAGAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................AGCAGCTGAGTCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................CAAGCAGCTGAGTCGCGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..............................AGCAGCTGAGTCGCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTGGAGGGCCAGGACTC2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGATGACTGCTGTGGAGGGC........2411.001010000
.......................GCCGACAAGCAGCTGAGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGCTGTGGAGGGCCAGGA...2411.001010000
.....................................................................................................................................................................TATCCGTTGG-TCCA-GGGTC.................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................GCCGACAAGCAGCTGAGTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........GAGATCGACGAGAACGCCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAGATGACTGCTGTGGAGGG.........2411.001100000
droBip1
TCTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTGTTACATA-TCTCCTC--------------------------------------------CTC----CCTCTCTTCAC---TGAAATATCCGTTGG-GTCAAGGG----------------------------TCAA-ACTACTAAA--------------------------------A------GCTATACCTT----------CCTCTCTAGAGATAGTAT-------------------------------CTTTG----TAAGG------------------------------------ATTA--GACTA--AAGGTGGTTATTG-------------------------------TC-------CTTGCAGGTCAGCGAATACCTGAAGAAACAGATGACCGCCGTCGAGGGCCAGGACTCSizeHit CountTotal NormTotal
No Reads
dp5
TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGAATATGTATGGATCGCACTTTGATTACG-A-T--------------------------------------------------ATGTCTGTCTC-CTACACTCATGAAATATCCGTTGG-GTTT-GGGCCACAC--G-------------------CTAATGTTACTAACCC--C--C----A------------------------------------------------------AAGAAAGCCTCTTCTTTTGTCCTC---CA-----------ACTATG----AAAGG--A----ATCGCTGAACTATA-----TCCC----------------------------------TGTCACT--------------------GT-T------TTCCGTAGGTGAGCGAGTATCTGAAGAAGCAGATGACGGCCGTGGAGGGCCAGGACTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAGCGAGTATCTGAAGA...............................2013.0030000000003
.............CGACGAGAACGCCGACAAGCAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.................GAGAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020110000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACGGCCGTGGAGG..........1811.0010100000000
......................CGCCGACAAGCAGCTGAGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCAGATGACGGCCGTGGAG...........2411.0010100000000
.................................................................................................................................................................GAAATATCCGTTGG-GTTT-GGG...................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGAAGAAGCAGATGACGGC..................2411.0010100000000
.............CGACGAGAACGCCGACAAGCAGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTATCTGAAGAAGCAGATGAC.....................2511.0010000000001
....CAAGGAGATCGACGAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.............CGACGAGAACGCCGACAAGCAGCTGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAGATGACGGCCGTGGAGG..........2311.0010100000000
..........................GACAAGCAGCTGAGTCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGTCGCGAAGAGGTAATCGAATATGTATGGATCGCACTTTGATTACG-A-T--------------------------------------------------ATGTCTGTCTCT-TACACTCATGAAATATCCGTTGG-GTTT-GGGCCATAC--G-------------------CTAATGTTACTAACCC--C--C----A------------------------------------------------------AAGAAAGCTTCTTCTTTTGTCCTC---CA-----------ACTATG----AAAGG--A----ATCGCTGAACTATA-----TCCC----------------------------------TGTCACT--------------------GT-T------TTCCGTAGGTGAGCGAGTATCTGAAGAAGCAGATGACGGCCGTGGAGGGCCAGGACTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....CAAGGAGATCGACGAGAACGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.007700000
....CAAGGAGATCGACGAGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.GTTCAAGGAGATCGACGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.........................CGACAAGCAGCTGAGTCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...........ATCGACGAGAACGCCGACAAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....CAAGGAGATCGACGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGGCCGTGGAGGGCCAGGACT.2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGGCCGTGGAGGGCCAGGACT.2511.001100000
droWil2
TGTTCAAGGAGATCGATGAGAATGCCGATAAGCAATTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCAAACCTTTTTTTTGCA-C-------------ATCTTA----------------------TATAGATATA--GATATCT-TCTACAAT-GTGATATATCCTTGGGCATAT-GGGC-AAATATGTACATACATACTTACCAAAACAA-CTAACTAACCA----GC----A--------------------------ATTTCACCTTAACATTGATTTCTCTTTAA---------------------AC------------------------------------------------------------T----------------------------------TGTCACTAATTGTCTATAATTTCCTTCGA-TT-----TCGAACAGGTCAGTGAATATCTGAAGAAACAAATGACCGCTGTGGAGGGTCAGGATTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....CAAGGAGATCGATGAGAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGACCGCTGTGGAGGGT........2012.00201100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGAAACAAATGACCGC..................2112.00211000
.....AAGGAGATCGATGAGAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100
......AGGAGATCGATGAGAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTGAAGAAACAAATGACC....................2211.00110000
.................................................................................................................................................................GATATATCCTTGGGCATAT-GG....................................................................................................................................................................................................................................................................................................................................2111.00101000
..........................GATAAGCAATTGAGCCGCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATCTGAAGAAAC............................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----TCGAACAGGTCAGTGAAT........................................2011.00100100
....................................TGAGCCGCGAAGAGGTAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACCGCTGTGGAGGGT........1911.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA-TT-----TCGAACAGGTCAGTGA..........................................2111.00100100
.....AAGGAGATCGATGAGAATGCCGATAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..TTCAAGGAGATCGATGAGAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..........................GATAAGCAATTGAGCCGCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...TCAAGGAGATCGATGAGAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................ATAAGCAATTGAGCCGCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCTGAAGAAACAAAT........................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGAATATCTGAAGAAAC............................2011.00110000
...................................................................................................................................................................TATATCCTTGGGCATAT-GGG...................................................................................................................................................................................................................................................................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATGACCGCTGTGGAGG..........2111.00100001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAACAAATGACCGCT.................2111.00101000
.GTTCAAGGAGATCGATGAGAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAACAAATGACCGCT.................1811.00100010
....CAAGGAGATCGATGAGAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAAATGACCGCTGTGGA............2111.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATGACCGCTGTGGAGG..........2011.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAAATGACCGCTGTGGAGG..........2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATGACCGCTGTGGAGGGT........2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTGTCTATAATTTCCT......................................................................2011.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGACCGCTGTGGAGGG.........2011.00100100
droVir3
TGTTCAAGGAGATCGACGAGAACGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTATCATT-T-TAT--TTATACTACACTCTATGTATATATATATATATGTGTATAT------A-----------------T-GTGATATATCCGTGGG--TAT-CGG----------------------------TT-C-GTTACTAACCT--CA-------TTCTTC-------------------------ACTTT----------T---T----------------------TATTTTTACT-----------ATTTTT-------TAAA-TCATATTCCTAACTTGTTCTTAT----------------TACTTATTTTTTGCACTTAA-------------------------------CTCA---CCTGCTCAGGTTAGCGAATATCTGAAGAAACAAATGACTGCCGTGGAGGGCCAGGACTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....CAAGGAGATCGACGAGAACGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000100000000000000000000000000000100000000000000000000000000010
...................GAACGCCGACAAGCAGCTGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATGACTGCCGTGGAGG..........2112.002000000000000000000000001000000000000000000000000000000000000010
.................................AGCTGAGCCGCGAAGAGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000010000000000000000000000000000000000000000000000000010
...TCAAGGAGATCGACGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
.GTTCAAGGAGATCGACGAGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
..............................AGCAGCTGAGCCGCGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................GAACGCCGACAAGCAGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGACTGCCGTGGAGGGCCAGGA...2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATATGTGTATAT------A-----------------T-GTGA........................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
.................................AGCTGAGCCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATGACTGCCGTGGAGGG.........2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................T-C-GTTACTAACCT--CA-------TTCTTC-------------------------.............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................GAGGTAATCGTCTATGTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAACAAATGACTGCCGTG..............2111.001000000000000000000000000000000010000000000000000000000000000000
..............GACGAGAACGCCGACAAGCAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............CGACGAGAACGCCGACAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................GCAGCTGAGCCGCGAAGAGGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................GATATATCCGTGGG--TAT-CGG----------------------------.......................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....AAGGAGATCGACGAGAACGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
....CAAGGAGATCGACGAGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
................CGAGAACGCCGACAAGCAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATGACTGCCGTGGAGGG.........2211.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGCCGTGGAGGGCCAGG....2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................TTAA-------------------------------CTCA---CCTGCTCAGGTTAG.............................................2211.001000000000000000000000000100000000000000000000000000000000000000
.................GAGAACGCCGACAAGCAGCTGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................AAGCAGCTGAGCCGCGAAGAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TTTATCATT-T-TAT--TTATACT.......................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTTCAAGGAGATCGATGAGAACGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACTTTTATCATTTT-G-TAATTGTTCTACAC----------------------------------------------TCTATA-T-GTGATATATCCGTGGG-TCTC-GGT------------------------------TC-GTTACTAACCT--CA-------TTCTTCATAATGCTCTAATT------GCTATGCC------------------------------------------------------------------------CTG-TA----A------------T---------TG--CTATAA--TATGT--CGGTTGGTTTGTTTC----G------------------------TTTG---TCTGTTTAGGTCAGCGAATATCTGAAGAAACAGATGACCGCTGTGGAGGGTCAGGACTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...TCAAGGAGATCGATGAGAACGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.......................................................................................................................................................................TCCGTGGG-TCTC-GGT------------------------------TC-GT................................................................................................................................................................................................................................................................................................1911.001000001
...............................GCAGCTGAGCCGCGAAGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGAAACAGATGACCGC..................2011.001000001
.............CGATGAGAACGCCGACAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGACCGCTGTGGAGGGTCA......2411.001000001
droGri2
TGTTCAAGGAGATCGATGAGAATGCCGACAAGCAGCTGAGCCGCGAAGAGGTAATCGTCTATGTATGGATCGCACATTTATCAGT-ATTGTTTTAGTTGTACACTCTA----------------------TAT------A-----------------T-GTGATATATCCGTGGG--TAT-CGG----------------------------TTTG-GCTACTAACCA--C--CTCATATTCTTCAT-----------------------------------------------------------------ATTTG---CA-----------ACATCA-------AAAT-GCATATTCCTAACCGATT-----TACC----------------------------------TCTCTTT--------------------GC-TTGTGAACGGCTTAGGTCAGTGAATATCTGAAGAAGCAAATGACGGCTGTGGAGGGTCAGGATTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................TCA-------AAAT-GCATATTCCTAACC..............................................................................................................................................2111.00110
......AGGAGATCGATGAGAATGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101

Generated: 05/18/2015 at 05:23 PM