ID:

dsi_7816

 Coordinate:

3r:11668947-11669096 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9 -9.6 -9.5

Flybase annnotation

five_prime_UTR [3r_11669097_11669289_-]; exon [3r_11669097_11669289_-]; intron [3r_11665706_11669096_-]; Antisense to intron [3r_11666071_11669916_+]

Repeatable elements

NameClassFamilyStrand
GA-richLow_complexityLow_complexity+
mature
star
  1. 2l:9496133-9496150 -
  2. dsi_27873  2l:14352784-14352801 -
  3. dsi_16384  2r:10053323-10053340 -
  4. dsi_19349  2r:10143265-10143282 -
  5. 2r:14037370-14037387 -
  6. 2r:16943044-16943061 -
  7. 2r:17676443-17676460 -
  8. dsi_20311  3l:8729605-8729622 -
  9. dsi_12419  3r:1268191-1268208 -
  10. 3r:1727929-1727946 -
  11. 3r:10112168-10112185 -
  12. dsi_7816  3r:11668968-11668985 -
  13. 3r:15317080-15317097 -
  14. 3r:19592207-19592224 -
  15. dsi_8379  3r:24074527-24074544 -
  16. 3r:25943381-25943398 -
  17. x:1475098-1475115 -
  18. x:4175976-4175993 -
  19. x:10945613-10945630 -
  20. x:12291357-12291374 -

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGAAGCACTAAAAGCGAAAAACGCCAGAAACAGAAACAAGGAATTGCAGCGTGAGTGTATAACTTTTTGGTTTTTGCCCCCGCGCTCTTTCTCTCTCTCCCTTTGCTGCTCTCTCTCTCTCCCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCGTGCGAGTGTGTGTGTGTTTGAATTTTACTGTGAATGTGACCGACGGTGTGTTCTCACGTACTCCGTGGATGATTTGCGGCCTTGCCAG
********************************************************************************************..............................(((.(((...(((......(((((......)))))..)))...))).))).......*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
......................................................................................................................................................................................................TGACCGACGGTGTGTTCTCAC............................... 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ACTGTGAATGTGACCGACGGT......................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0
....................................................................................................................................................................................................TGTGACCGACGGTGTGTTCT.................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................GCAGCGTGAGTGTATAACTTT........................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................CTCTCTCCCTTTGCTGCTCTC......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................TTTGAATGTTACTGTGAATTTGCC................................................ 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0
.........................................AATTGCAGCGTGAGTGTATAACT.......................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGTGGATGATTAGAGGCCT...... 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................CGTGGATGATTAGAGGCC....... 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................ATTGCGGCCTCTGTGTTGTA............................................................................................ 20 3 9 0.11 1 0 0 0 1 0 0 0 0 0
.......................CCGGAAACAGAAGCAAGGAAG.............................................................................................................................................................................................................. 21 3 10 0.10 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................GTGCGAGTGTGTGTGTGT....................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCTTCGTGATTTTCGCTTTTTGCGGTCTTTGTCTTTGTTCCTTAACGTCGCACTCACATATTGAAAAACCAAAAACGGGGGCGCGAGAAAGAGAGAGAGGGAAACGACGAGAGAGAGAGAGGGCGAGAGAAAACGGGAGAACGCCGAAGACACAACAGACGCACGCTCACACACACACAAACTTAAAATGACACTTACACTGGCTGCCACACAAGAGTGCATGAGGCACCTACTAAACGCCGGAACGGTC
***********************************************************************..............................(((.(((...(((......(((((......)))))..)))...))).))).......******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 O002
Head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
.......................................................................................................................................................................................................CTGGCTGCCACACAAGGGTGC.............................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................TTGAGGGCGAGAGAAAACGGGAG............................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGCTGCCACACGAGAGTGCGT............................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCCGAAGACACAACAGAC.......................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................TGCCACACAAGAGTGCATGAGGCAC..................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................CGGTCTCTGTCTTTGTTC.................................................................................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................ACACTGCCTGCCACAC...................................... 16 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................AGAGGGAAAAGACTATAGAGA...................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.......................GGTCCTTGTATCTGTTCCTT............................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................AGAGGGCAACGACGAGATA........................................................................................................................................ 19 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................AGAAAGAGAGAGGGCAACAGAA....................................................................................................................... 22 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................AGAGAGTGAGGGAAA.................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................................TGCGCCACAAGGGTGCAT............................ 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11668897-11669146 - dsi_7816 CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CTCC----------CT----------TTGCTGCTC---------TCT--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAG
droSec2 scaffold_0:12497053-12497304 - CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CTCC----------CT----------TTGCTGCTC---------TCTCTCTCTCTC----------------------------CCACTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAG---GATT-TGCGGCCTTGCCAG
dm3 chr3R:9509823-9510066 + CTA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CT------------------------TTGCTGCTC-----------T--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCTAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAG
droEre2 scaffold_4770:12125315-12125571 - CGA---AGCACTAATAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCGCTCT--CTCTCCCTCTTTCTCTCTCTCA----------CT------CTCCTTGCTGCTC-----------------TCTC----------------------------CCGCTCTCT-TTGCCCGCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAG
droYak3 3R:13818217-13818476 + CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTGTC----ATTCTATCTCTCA----------CT------CTCCTTGCTGCTC---------TCT--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGTCAG
droEug1 scf7180000409802:464221-464483 - CGA---AGCACTAAAAAG-AAAAAATATAACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCT--------------TTTACTTTGGTGCTATTG----C----TGCTGC-------------T--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--ACGAGTGTATGCGTCCTCGTGTGC--GTGTGTT----------------TGAG-----------------------------ATGTGAC----------AGTGTGT----------------------------------------------------TCTCACGTACCCT---GTG--GATGTGGATT-TACGGCCTTGTCAA
droBia1 scf7180000302402:2246318-2246565 + CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACAAGAAGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCTT--G----------CT---------GCTCCTGCTCTC--------GC-------------T--CTCTCTCTCA-------------------------CTCCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------TGTGCGAGT--------------GTGT--GTGCGTT----------------TGAGTTTT------------------G-----TCAGTGAC----------GGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TACGGCCTTGCCAA
droTak1 scf7180000415380:324755-324992 + CGA---AGCACTGAAAGC-AAAAA-----TCGCCAGAAACAAGAAG--GAAT---AGGAATTGCAGCCAGCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCTC----------------------------------------TGCTGCTCTTTCT--G--CT--CTCACTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT------GTT----------------TGATTTTT------------------A------CTGTGAC------------TGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TACGGCCTTGCACA
droEle1 scf7180000491047:1682696-1682909 - CGA---AGCACTAAAAGC-GGAA-------------AAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTTC---AGTT--------------------AGTATTGCC---CGCGCTCTCTTTCTCCC--G----------CT--------------------CTC----CTGCTC---------TCT------------------------------------------CTCTCTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TG------------------------A------CTGCGAC----------TGTGTTT----------------------------------------------------TCTCACGTACTTC---GCA--GAT---GATT-TACGGCCTTGCAAA
droRho1 scf7180000769095:53259-53477 - CGA---AGCACTAAAAGC-GGAA-------------AAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTTC---AGTTT-------------------GGTATTGCC---CGCGCTCTCTTTCTCCC--G----------CT--------------------CTC----CTGCTC---------TCT------C----------------------------------TCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGTGTGTGTG----------------------TTTG------------------A------CTGCGAC----------TGTGTAC----------------------------------------------------TCTCACGTACTTC---GCA--GAT---GATT-TACGGCCTTGCAAA
droFic1 scf7180000453912:9223-9471 + CGA---AGCACTGGAAGTTAAAAA-----ACGTCAGAAACAGAAACGAAACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTT--------------------GGTATTGCC--CCGCGCTCTCT--CTCTC--T----------CTCT----------CT----------T----------ACACCGCACT--CTCTCTC----------------------------CCGCTCT--CTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTA------------------AGATTGACTGTGAC----------TGTGTGT----------------------------------------------------TCTCACGTACTCC---GCG--GAT---GATT-AACGGCCTTGCGGA
droKik1 scf7180000302706:520151-520375 + AATGCTAGCAGC-----------A-----ACGCCAGAAAC-TA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTC----AGCC--------------------AGCATTGCC-CCCGCGCTCTCT--CTCTCGCA----------CT--------------------CGC---------------------C--CGCTCTCCCGCTGCTAGTCTACTGCTACTGCCGTCC----TGCTCTCGCCCTCTTGCGGCTTCTGTGTTGTCTGCT------T--GCGAGT--------------GTTT------------------------------------------------------------------------GA--GTGTGTGTGTGTG----TGGTTCG----------------------------------TCTCACGGACTCC----------------------GGCCTTGC---
droAna3 scaffold_13340:10532398-10532559 - AAA---AACATCACA-------CG-----ACG-CGGAAAC--T-----AACA---AGGAATTACA----GCGTGAGTTGAGTGTTTA-A---CTTTTT----GGTTGGTACCCGTCAGT------CAGC--------------------------------------------------------------------------------------------------------------------------------------------ATTGCGGCTTCTGTGTT---TGCG------T--GCGGGT--------------GTGT------------------------------------------------------------------------GA--GTGTGTTT----------------TTC-------------------------------TCTCACGTACTCC---G----GAT---GATT-TGCGGCCTTGT---
droBip1 scf7180000396708:5547592-5547753 - AAG------------ATC-AAACG-----ACG-CGGAAAC--A-----AACA---AGGAATTACA----GCGTGAGTTGAGTGTTTA-A---CTTTTT----GGTTGGTACCCGTCAGT------CAGC--------------------------------------------------------------------------------------------------------------------------------------------ATTGCGGCTTCTGTGTT---TGCA------T--GCGAGT--------------GTGT------------------------------------------------------------------------GA--GTGTGTTT----------------TTC-------------------------------TCTCACGTACTCC---G----GAT---GATT-TGCGGCCTTGTGGG
dp5 2:10061332-10061547 + AGCGCAGACACCAAAAA----------------CAAAGGCAGA-----AACA---AGAAATTGCA----GCGTGA-----GTGTAAA-A---CTTTTT----GGTAA------------AAGATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTGCGGCTTCTGTGTTGTCTGAG------C--GTG------TCTCTGCCCATGTGT--GTGTGATTGAATGCGAGT------------------------GTATTTT--------------------CGA--GTGTGTTTGTGTGTACATGATTCGTTC-------------------------------TCTCACGTACTCC---GCG--TAT---GAT--TGCGGCCTTGCCTG
droPer2 scaffold_0:10419987-10420202 - AGCGCAGACACCAAAAA----------------CAAAGGCAGA-----AACA---AGAAATTGCA----GCGTGA-----GTGTAAA-A---CTTTTT----GGTAA------------AAGATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTGCGGCTTCTGTGTTGTCTGAG------C--GTG------TCTCTGCCCATGTGT--GTGTGATTGAATGCGAGT------------------------GTATTTT--------------------CGA--GTGTGTTTGTGTGTACATGATTCGTTC-------------------------------TCTCACGTACTCC---GCG--TAT---GAT--TGCGGCCTTGCCTG
droWil2 scf2_1100000004943:10958073-10958312 + CAGG--AGAAATCGAG-T-ACCAAAA---ACAAGGGCAGCAAC------ACA--AGGAAATTGCA----GCGTGA-----GTGTAAA-A--ACTTTTTT---GGAAAAA----------AAGATTCAATGCCTCTC-----------------------------------------------------------------------------------------------------------------------------CTCGCCCTCTTGCGGCTTCTGTGTTGTCTGTG------C--GCGCGT--------------GTGTGTGTGTGTCTGTATGCATAT------------------------GTAT----------ATATGCATGTGTGTAAGTGTGTGT----------A-------------------TTC----T-CGTATACTTTGATTCTCACGTATTCC---CCC--GAC-----TT-GGTTTTATTATTGT
droVir3 scaffold_12822:1471289-1471546 + AAA---ATTCTGAAAAGG-C---G-----CTGCCAACAGCATA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACA---TTTTTT----GGTC-------------AAGATTCAATATTACCCCTCGCGCTTTCG--CTT----------------------------------------------------ACAC------------------------------------------------CGCTGTTGCCCTCTTGCGGCTTCTGTGTC---TAAGCTTGTGTGTGTGTGT--------------GTGT----GTGTG----------TGTATGTGCGTTTA------------------G------GTGTGCATGTG----------TAT------------------TTTTCGTGTGTAACTATACTTG----------ATTCTGATGTACTTCTAAATACGAG----TATTTAACGCGTTCGTAAA
droMoj3 scaffold_6540:11634811-11635024 - CT-----------------------------GCCAGTAGCGTA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACA---TTTTTT----GGTC-------------AAGATTGAATAGTACCCCTCGCGCTTTCG--CTT----------------------------------------------------CCAC------------------------------------------------CGCTGTTGCTCTCTTGCGGCTTCTATGAC---TGAGCTTGTGTGTGTGAGT--------------GTTT----GCGTG----------TGTATGTGTGTTTA------------------G------GTGTGCATGTG----------TCT------------------TTTTCGTGTGTAACTATACTTG----------ATTCTGATGTT-------------------------CATCT------T
droGri2 scaffold_14624:2517687-2517936 + TAA---AGG--------C-GCAGC--------CAAACAGCATA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACACAATTTTTTTTTCCGTC-------------AAGATTCAATATTACCCCTCGCGCTTTCG--CTT----------------------------------------------------ACAC------------------------------------------------CGCTCTTGCCCTCTTGCGGCTTCTCTGTC-TCTGAG------C--GTG------TACGTATGTGTGT------GCGTG----------------TGCGTTAAGGTGTGCATATGTATTTT-----------------------------------------------------CGTGTGTAACTATATTTG--AT------ATTCTAATGGACTTCTAAATA--GAC---AATT-AGTATTATTATTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CTCC----------CT----------TTGCTGCTC---------TCT--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................TGACCGACGGTGTGT----------------------------------------------------TCTCAC........................................2113.00312000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGGT......................................................................................................2112.00200000000001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCGACGGTGTGT----------------------------------------------------TCT...........................................2011.00100000000000001000
..............................................................GCA----GCGTGA-----GTGTATA-A---CTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................................................................................CTC--T----------CTCC----------CT----------TTGCTGCTC---------TC....................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..........................................................AATTGCA----GCGTGA-----GTGTATA-A---CT............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
....................................................................................................................................................................................................................................................................................................G------T--GCGAGT--------------GTGT--GTGTGT............................................................................................................................................................................18200.05100000000000100000
droSec2
CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CTCC----------CT----------TTGCTGCTC---------TCTCTCTCTCTC----------------------------CCACTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAG---GATT-TGCGGCCTTGCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................TGAATGTGACCGACGGTGTGT----------------------------------------------------..............................................2111.0010100
.................................CAGAAACAGA-----AACA---AGGAATTGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...................GAAAA-----ACGCCAGAAACAGA-----AACA---AGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
................................................AACA---AGGAATTGCA----GCGTGA-----G.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................................A---AGGAATTGCA----GCGTGA-----GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCC---GTG--GAG---GATT-TGCGGC........2111.0011000
.......................................................................................................................................................................................................................................................................................CTGTGTTGTCTGCG------T--GCGAGT--------------........................................................................................................................................................................................2111.0010001
..............................................................................................TTTT----GGTTT-----------------------TTGCC-CCCGCGC...........................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...............................................................................................................................................................................................................................................................................................TCTGCG------T--GCGAGT--------------GTGT--GTGT..............................................................................................................................................................................2130.6720011
...............................................................................................................................................................................................................................................................................................TCTGCG------T--GCGAGT--------------GTGT--GT................................................................................................................................................................................1930.3310010
...................................................................................................................................................................................................TGCTGCTC---------TCTCTCTCTCTC----------------------------..............................................................................................................................................................................................................................................................2040.2511000
..................................................................................................................................................................................................................................................................................................GCG------T--GCGAGT--------------GTGT--GTGT..............................................................................................................................................................................18160.2540040
................................................................................................................................................................................................................................................................................................CTGCG------T--GCGAGT--------------GTGT--GT................................................................................................................................................................................1850.2010010
.................................................................................................................................................................................................................................................................................................TGCG------T--GCGAGT--------------GTGT--GTGTG.............................................................................................................................................................................20120.0810100
dm3
CTA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTTT--CTCTC--T----------CT------------------------TTGCTGCTC-----------T--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCTAGT--------------GTGT--GTGTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................GGAATTGCA----GCGTGA-----GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................AGA-----AACA---AGGAATTGCA----GCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2225.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011602000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AATTGCA----GCGTGA-----GTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000002000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATGTGACCGACGGTGT....................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................T--GCTAGT--------------GTGT--GTGTGTT----------------TGA........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACG........................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................AGAAACAGA-----AACA---AGGAATTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCC---GTG--GAT---GATT-TGCG..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
....................................AAACAGA-----AACA---AGGAATTGCA----A....................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATGTGACCGACGGTGTGT----------------------------------------------------TC............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GCTTCTGTGTTGTCTGCG------T--GC..........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GACCGACGGTGTGT----------------------------------------------------TCTCACGT......................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
................................................................................................................................................................................................................................................................................................................................................................................................CTGTGAATGTGACCGACGGTGTG...................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTACTCC---GTG--GAT---GATT-TGCGGC........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................A----GCGTGA-----GTGTATA-A---CTT...........................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCA----GCGTGA-----GTGTATA-A---CTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................AGGAATTGCA----GCGTGA-----GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTGTGTTGTCTGCG------T--GCTAGT--------------GTGT--..................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAAAGC-GAAAA-----ACGCCAGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GAT................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................TGCA----GCGTGA-----GTGTATA-A---CTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGGTGTG...................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGCTTCTGTGTTGTCTGCG------T--G...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TGTT----------------TGAATTTT------------------A------CTGTGAAT..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................GTTGTCTGCG------T--GCTAGT--------------G.......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CT------------------------TTGCTGCTC-----------T--CTCTCTC----------------------------CC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACCGACGGTGTGT----------------------------------------------------TCTCACGT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................TCTC--T----------CT------------------------TTGCTGCTC-----------T--CTC..............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GA-----AACA---AGGAATTGCA----GCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGGTG.....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................................................................TCTGCG------T--GCTAGT--------------GTGT--GTGTGTT----------------T..........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTTGTCTGCG------T--GCTAGT--------------GTGT--..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................CGCCAGAAACAGA-----AACA---AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCCAGAAACAGA-----AACA---AGGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGAAACAGA-----AACA---AGGAATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AGT--------------GTGT--GTGTGTT----------------TGAA.......................................................................................................................................................1831.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................T------------------------TTGCTGCTC-----------T--CTCTCTC----------------------------CCG...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...............................GCCAGAAACAGA-----AACA---AGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TT-----------------------TTGCC-CCCGCGCTCTTT--CT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAGA-----AACA---AGGAATTGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.TA---AGCACTAAAAGC-GAAAA-----ACGCCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGCA----GCGTGA-----GTGTATA-A---CT............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CTCTTGCGGCTTCTGTGTTG...........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................CCAGAAACAGA-----AACA---AGGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................GCCAGAAACAGA-----AACA---AGGAATTGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGA-----AACA---AGGAATTGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................A---AGGAATTGCA----GCGTGA-----GT........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................TGTGTTGTCTGCG------T--GCTAGT--------------........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TGTTGTCTGCG------T--GCTAGT--------------GTG.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.....................................AACAGA-----AACA---AGGAATTGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................GTGA-----GTGTATA-A---CTTTTT----GGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................A----GCGTGA-----GTGTATA-A---CTTTTT----....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGCCAGAAACAGA-----AACA---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------T.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GAATGTGACCGACGGTGTG...................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGG.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................AAACAGA-----AACA---AGGAATTGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGACCGACGGTGTGT----------------------------------------------------TCT...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................................................................................................GTTGTCTGCG------T--GCTAGT--------------GTG.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TT------------------A------CTGTGAATGTGACCGACGGTGT....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................C-GAAAA-----ACGCCAGAAACAGA-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CTGCTC-----------T--CTCTCTC----------------------------CCGCTC........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................A---AGGAATTGCA----GCGTGA-----G.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TGTGTTGTCTGCG------T--GCTAGT--------------A.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATA-A---CTTTTT----GGTTT-----------------------TTGCC-C.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTGTGTTGTCTGCG------T--GCTAGT--------------G.......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTTGTCTGCG------T--GCTAGT--------------GTGT--GT................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CT------------------------TTGCTGCTC-----------T--CTCTCTC----------------------------CCG...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................TCTGTGTTGTCTGCG------T--GCTAG.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................TGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-C.................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAGA-----AACA---AGGAATTGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................AATTGCA----GCGTGA-----GTGTATA-A---CT............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CA---AGGAATTGCA----GCGTGA-----GTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................A-----AACA---AGGAATTGCA----GCGTGA-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................ATTGCA----GCGTGA-----GTGTATA-A---C.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ACA---AGGAATTGCA----GCGTGA-----GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGTGT----------------------------------------------------TCTCACGTACTC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGCCAGAAACAGA-----AACA---AGGAATTGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTGTGTTGTCTGCG------T--GCTAGT--------------........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCC---GTG--GAT---GATT-..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACAGA-----AACA---AGGAATTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCCAGAAACAGA-----AACA---AGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CCTCTTGCGGCTTCTGTGTTG...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T------------------A------CTGTGAATGTGACCGACGG.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGCG------T--GCTAGT--------------GTGT--GTGTGT............................................................................................................................................................................2130.6720000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CTCTCTC----------------------------CCGCTCTCTTTTGC................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCTGCG------T--GCTAGT--------------GTGT--GT................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CTGCG------T--GCTAGT--------------GTGT--GTG...............................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GA-----AACA---AGGAATTGCA----GCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGA---AGCACTAATAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCGCTCT--CTCTCCCTCTTTCTCTCTCTCA----------CT------CTCCTTGCTGCTC-----------------TCTC----------------------------CCGCTCTCT-TTGCCCGCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................CGAGT--------------GTGT----GTGTT----------------TGAATTT....................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................................GTTGTCTGCG------T--GCGAGT--------------G.......................................................................................................................................................................................1811.0010000100
..................................................CA---AGGAATTGCA----GCGTGA-----GT........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTGTC----ATTCTATCTCTCA----------CT------CTCCTTGCTGCTC---------TCT--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTT------------------A------CTGTGAATGTGACCGACGGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TGCGGCCTTGTCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................A------CTGTGAATGTGACCGACGGT......................................................................................................2111.00110000000000
..............................CGCCAGAAACAGA-----AACA---AGGAATTGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.....................................AACAGA-----AACA---AGGAATTGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CGA---AGCACTAAAAAG-AAAAAATATAACGCCAGAAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCT--------------TTTACTTTGGTGCTATTG----C----TGCTGC-------------T--CTCTCTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--ACGAGTGTATGCGTCCTCGTGTGC--GTGTGTT----------------TGAG-----------------------------ATGTGAC----------AGTGTGT----------------------------------------------------TCTCACGTACCCT---GTG--GATGTGGATT-TACGGCCTTGTCAASizeHit CountTotal NormTotal
No Reads
droBia1
CGA---AGCACTAAAAGC-GAAAA-----ACGCCAGAAACAGA-----AACAAGAAGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCTT--G----------CT---------GCTCCTGCTCTC--------GC-------------T--CTCTCTCTCA-------------------------CTCCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------TGTGCGAGT--------------GTGT--GTGCGTT----------------TGAGTTTT------------------G-----TCAGTGAC----------GGTGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TACGGCCTTGCCAASizeHit CountTotal NormTotal
No Reads
droTak1
CGA---AGCACTGAAAGC-AAAAA-----TCGCCAGAAACAAGAAG--GAAT---AGGAATTGCAGCCAGCGTGA-----GTGTATA-A---CTTTTT----GGTTT-----------------------TTGCC-CCCGCGCTCTCT--CTCTC----------------------------------------TGCTGCTCTTTCT--G--CT--CTCACTC----------------------------CCGCTCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT------GTT----------------TGATTTTT------------------A------CTGTGAC------------TGTGT----------------------------------------------------TCTCACGTACTCC---GTG--GAT---GATT-TACGGCCTTGCACASizeHit CountTotal NormTotal
No Reads
droEle1
CGA---AGCACTAAAAGC-GGAA-------------AAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTTC---AGTT--------------------AGTATTGCC---CGCGCTCTCTTTCTCCC--G----------CT--------------------CTC----CTGCTC---------TCT------------------------------------------CTCTCTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT--GTGTGTT----------------TG------------------------A------CTGCGAC----------TGTGTTT----------------------------------------------------TCTCACGTACTTC---GCA--GAT---GATT-TACGGCCTTGCAAASizeHit CountTotal NormTotal
No Reads
droRho1
CGA---AGCACTAAAAGC-GGAA-------------AAACAGA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTTC---AGTTT-------------------GGTATTGCC---CGCGCTCTCTTTCTCCC--G----------CT--------------------CTC----CTGCTC---------TCT------C----------------------------------TCTCTTTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGTGTGTGTG----------------------TTTG------------------A------CTGCGAC----------TGTGTAC----------------------------------------------------TCTCACGTACTTC---GCA--GAT---GATT-TACGGCCTTGCAAASizeHit CountTotal NormTotal
No Reads
droFic1
CGA---AGCACTGGAAGTTAAAAA-----ACGTCAGAAACAGAAACGAAACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTT----GGTT--------------------GGTATTGCC--CCGCGCTCTCT--CTCTC--T----------CTCT----------CT----------T----------ACACCGCACT--CTCTCTC----------------------------CCGCTCT--CTTGCCCTCTTGCGGCTTCTGTGTTGTCTGCG------T--GCGAGT--------------GTGT----GTGTT----------------TGAATTTA------------------AGATTGACTGTGAC----------TGTGTGT----------------------------------------------------TCTCACGTACTCC---GCG--GAT---GATT-AACGGCCTTGCGGASizeHit CountTotal NormTotal
No Reads
droKik1
AATGCTAGCAGC-----------A-----ACGCCAGAAAC-TA-----AACA---AGGAATTGCA----GCGTGA-----GTGTATA-A---CTTTTC----AGCC--------------------AGCATTGCC-CCCGCGCTCTCT--CTCTCGCA----------CT--------------------CGC---------------------C--CGCTCTCCCGCTGCTAGTCTACTGCTACTGCCGTCC----TGCTCTCGCCCTCTTGCGGCTTCTGTGTTGTCTGCT------T--GCGAGT--------------GTTT------------------------------------------------------------------------GA--GTGTGTGTGTGTG----TGGTTCG----------------------------------TCTCACGGACTCC----------------------GGCCTTGC---SizeHit CountTotal NormTotal
No Reads
droAna3
AAA---AACATCACA-------CG-----ACG-CGGAAAC--T-----AACA---AGGAATTACA----GCGTGAGTTGAGTGTTTA-A---CTTTTT----GGTTGGTACCCGTCAGT------CAGC--------------------------------------------------------------------------------------------------------------------------------------------ATTGCGGCTTCTGTGTT---TGCG------T--GCGGGT--------------GTGT------------------------------------------------------------------------GA--GTGTGTTT----------------TTC-------------------------------TCTCACGTACTCC---G----GAT---GATT-TGCGGCCTTGT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................G-----ACG-CGGAAAC--T-----AACA---AGGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.....................................AAC--T-----AACA---AGGAATTACA----GCTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.503300000
.....................................................................................................................................................................................................................................................................................TTCTGTGTT---TGCG------T--GCGGGT--------------GTG.....................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................................................................................CGGGT--------------GTGT------------------------------------------------------------------------GA--GTGTGTTT----------------T...............................................................................2011.001100000
.......ACATCACA-------CG-----ACG-CGGAAAC--T-----AACA---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droBip1
AAG------------ATC-AAACG-----ACG-CGGAAAC--A-----AACA---AGGAATTACA----GCGTGAGTTGAGTGTTTA-A---CTTTTT----GGTTGGTACCCGTCAGT------CAGC--------------------------------------------------------------------------------------------------------------------------------------------ATTGCGGCTTCTGTGTT---TGCA------T--GCGAGT--------------GTGT------------------------------------------------------------------------GA--GTGTGTTT----------------TTC-------------------------------TCTCACGTACTCC---G----GAT---GATT-TGCGGCCTTGTGGGSizeHit CountTotal NormTotal
No Reads
dp5
AGCGCAGACACCAAAAA----------------CAAAGGCAGA-----AACA---AGAAATTGCA----GCGTGA-----GTGTAAA-A---CTTTTT----GGTAA------------AAGATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTGCGGCTTCTGTGTTGTCTGAG------C--GTG------TCTCTGCCCATGTGT--GTGTGATTGAATGCGAGT------------------------GTATTTT--------------------CGA--GTGTGTTTGTGTGTACATGATTCGTTC-------------------------------TCTCACGTACTCC---GCG--TAT---GAT--TGCGGCCTTGCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................CTTCTGTGTTGTCTGAG------C--GTG------...................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................TTCTGTGTTGTCTGAG------C--GC..........................................................................................................................................................................................................1911.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTC-------------------------------TCTCACGTACTCC---GCG--.........................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TACATGATTCGTTC-------------------------------TCTCACG.......................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................TGTTGTCTGAG------C--GTG------TCTCT..............................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................T--GTGTGATTGAATGCGAGT------------------------G.......................................................................................................................................2011.0010100000000
.........................................................................................................................GATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTGCGGT.....................................................................................................................................................................................................................................2211.0010100000000
..........................................A-----AACA---AGAAATTGCA----GCGTGA-----GTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
......................................................................................A-A---CTTTTT----GGTAA------------AAGATCC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................A------------AAGATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTG.........................................................................................................................................................................................................................................2111.0010100000000
.................................................ACA---AGAAATTGCA----GCGTGA-----GT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
............................................................................................................................................................................................................................................................................................TTGTCTGAG------C--GTG------TCTCTGC............................................................................................................................................................................................2011.0010100000000
droPer2
AGCGCAGACACCAAAAA----------------CAAAGGCAGA-----AACA---AGAAATTGCA----GCGTGA-----GTGTAAA-A---CTTTTT----GGTAA------------AAGATCCAATATTACC--------------------------------------------------------------------------------------------------------------------------------------CTTGCGGCTTCTGTGTTGTCTGAG------C--GTG------TCTCTGCCCATGTGT--GTGTGATTGAATGCGAGT------------------------GTATTTT--------------------CGA--GTGTGTTTGTGTGTACATGATTCGTTC-------------------------------TCTCACGTACTCC---GCG--TAT---GAT--TGCGGCCTTGCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................GCA----GCGTGA-----GTGTAAA-A---CTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
CAGG--AGAAATCGAG-T-ACCAAAA---ACAAGGGCAGCAAC------ACA--AGGAAATTGCA----GCGTGA-----GTGTAAA-A--ACTTTTTT---GGAAAAA----------AAGATTCAATGCCTCTC-----------------------------------------------------------------------------------------------------------------------------CTCGCCCTCTTGCGGCTTCTGTGTTGTCTGTG------C--GCGCGT--------------GTGTGTGTGTGTCTGTATGCATAT------------------------GTAT----------ATATGCATGTGTGTAAGTGTGTGT----------A-------------------TTC----T-CGTATACTTTGATTCTCACGTATTCC---CCC--GAC-----TT-GGTTTTATTATTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................A---ACAAGGGCAGCAAC------ACA--AGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGATTCTCACGTATTCC---C.............................2111.00110000
.....................CAAAA---ACAAGGGCAGCAAC------ACA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............G-T-ACCAAAA---ACAAGGGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...................ACCAAAA---ACAAGGGCAGCAAC------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
................................................................................................................................................................................................................................................................................................CTGTG------C--GCGCGT--------------GTGTGTGTG...............................................................................................................................................................................2120.50101000
....................................................................................................................................................................................................................................................................................................G------C--GCGCGT--------------GTGTGTGTGTG.............................................................................................................................................................................19200.05100010
droVir3
AAA---ATTCTGAAAAGG-C---G-----CTGCCAACAGCATA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACA---TTTTTT----GGTC-------------AAGATTCAATATTACCCCTCGCGCTTTCG--CTT----------------------------------------------------ACAC------------------------------------------------CGCTGTTGCCCTCTTGCGGCTTCTGTGTC---TAAGCTTGTGTGTGTGTGT--------------GTGT----GTGTG----------TGTATGTGCGTTTA------------------G------GTGTGCATGTG----------TAT------------------TTTTCGTGTGTAACTATACTTG----------ATTCTGATGTACTTCTAAATACGAG----TATTTAACGCGTTCGTAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................TT----------------------------------------------------ACAC------------------------------------------------CGCTGTTGCCCTCTT..........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................ATA-----AACA---AGGAATTGCA----ACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATGTACTTCTAAATACGAG----TAT................2611.001000000000000000000000000000010000000000000000000000000000000000
............AAAAGG-C---G-----CTGCCAACAGCATA-----A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGTATGTGCGTTTA------------------G------GTGTGC....................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...............AGG-C---G-----CTGCCAACAGCATA-----AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGATGTACTTCTAAATACGAG----...................2511.001000010000000000000000000000000000000000000000000000000000000000
....................................CAGCATA-----AACA---AGGAATTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTA------------------G------GTGTGCATGTG----------TAT------------------TTT.............................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGATGTACTTCTAAATACGAT----...................2511.001000010000000000000000000000000000000000000000000000000000000000
............AAAAGG-C---G-----CTGCCAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......ATTCTGAAAAGG-C---G-----CTGCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTTGTGTGTGTGTGT--------------GTGT----GTG.............................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CT-----------------------------GCCAGTAGCGTA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACA---TTTTTT----GGTC-------------AAGATTGAATAGTACCCCTCGCGCTTTCG--CTT----------------------------------------------------CCAC------------------------------------------------CGCTGTTGCTCTCTTGCGGCTTCTATGAC---TGAGCTTGTGTGTGTGAGT--------------GTTT----GCGTG----------TGTATGTGTGTTTA------------------G------GTGTGCATGTG----------TCT------------------TTTTCGTGTGTAACTATACTTG----------ATTCTGATGTT-------------------------CATCT------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................CTT----------------------------------------------------CCAC------------------------------------------------CGCTGTTGCTCTCT...........................................................................................................................................................................................................................................2111.001100000
................................CCAGTAGCGTA-----AACA---AGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................TGTATGTGTGTTTA------------------G------GTGTGC....................................................................................................................2120.501000001
...........................................................................................................................................................................................................................................................................................................TGTGTGAGT--------------GTTT----GCGTG----------TA...............................................................................................................................................................20170.061100000
droGri2
TAA---AGG--------C-GCAGC--------CAAACAGCATA-----AACA---AGGAATTGCA----ACGTGA-----GTGCATACACAATTTTTTTTTCCGTC-------------AAGATTCAATATTACCCCTCGCGCTTTCG--CTT----------------------------------------------------ACAC------------------------------------------------CGCTCTTGCCCTCTTGCGGCTTCTCTGTC-TCTGAG------C--GTG------TACGTATGTGTGT------GCGTG----------------TGCGTTAAGGTGTGCATATGTATTTT-----------------------------------------------------CGTGTGTAACTATATTTG--AT------ATTCTAATGGACTTCTAAATA--GAC---AATT-AGTATTATTATTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:45 AM