ID:

dsi_7796

 Coordinate:

2l:7529003-7529257 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_7529258_7529880_+]; CDS [2l_7529258_7529880_+]; CDS [2l_7528945_7529002_+]; exon [2l_7528811_7529002_+]; intron [2l_7529003_7529257_+]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAAGTGCTGTGTCTACGTGAGCCCCTGCTGCCATAGTCCATCTCGCTCACACATTTTGCCGCTTGTTTTTGAGCATGCATACACTTTAAAAAAAATGAGTAAACAATGCATATTATATGTCACAATTACTACAAAATGTATGATTGGAAATAATGAACGCGTGTACGGGCAGTAATAATGCTATTCAGCACCGCTCATTTTATATACACCTATTATAACCTGGATTTCTCCTTTATATTATAGAATACAGTCAGCACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTT
**************************************************(((.(((((((((..((((((.......((((((....((((...)))).......)))))).((((((((.((((((......((((((....((((..........))))..........((((((...((.((((((.((((...)))))))))))).))))))...)))))))))))).)))).)))).....))))))...))))))))).)))..((((.(((....(((....)))....))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................................................................................................................................................GCAACGAGGTCTTAA.... 15 1 11 1.27 14 14 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................TCAGCACCAGGACCCGGCTCAGCTGCAA............... 28 0 1 1.00 1 0 0 1 0 0 0 0
................AAAAACAAGTCGGAGCGAC................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0
..............................GCGACGCGAGAAATATGAAG................................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CAGCTGCAACGAGGTCTAAA.... 20 0 1 1.00 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................CCTGGATTCCTCTTTTACATT...................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................GCAGCAACGAGGTCTTA..... 17 2 15 0.53 8 8 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................CCTGGATTCCTCTTTTACAT....................................................... 20 3 2 0.50 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CAGCAAAGAGGTCTAATGCTT 21 3 8 0.38 3 0 0 3 0 0 0 0
.............................................................................................................................................................................................................................................................................................................AAAGAAGACAGTCGGCACCA.................................. 20 3 5 0.20 1 0 0 0 0 0 1 0
............................................................................................................................................................................TATTATATGTCTCAAT....................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................................................................................GCAGCAACGAGGTCTTAA.... 18 2 6 0.17 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CAGCAACGAGGTCTTAAG... 18 2 7 0.14 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCCAGGATTTCTCTTTTATAT....................................................... 21 3 8 0.13 1 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................................................................................................................CAGCAACGAGGTCTTAA.... 17 2 20 0.10 2 2 0 0 0 0 0 0
..........................GGGAGCGTCGCGAGAAACA...................................................................................................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 1 0 0 0
........................................................................................................................................................................................................GATGATTCGAAATAATG.......................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................................AATGTAATTCAGCTCCGCT.................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0
...............GAAAAACAAATCGGA..................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0
.........................TCGAAGCAACGCGAGA.......................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

GAGGTTCTTCGTGTTCTTTTTGTTCAGCCTCGCTGCGCTCTTTATACTTCCACTCACTTTACTTTCACGACACAGATGCACTCGGGGACGACGGTATCAGGTAGAGCGAGTGTGTAAAACGGCGAACAAAAACTCGTACGTATGTGAAATTTTTTTTACTCATTTGTTACGTATAATATACAGTGTTAATGATGTTTTACATACTAACCTTTATTACTTGCGCACATGCCCGTCATTATTACGATAAGTCGTGGCGAGTAAAATATATGTGGATAATATTGGACCTAAAGAGGAAATATAATATCTTATGTCAGTCGTGGTCCTGGGCCGAGTCGACGTTGCTCCAGATTTCGAA
**************************************************(((.(((((((((..((((((.......((((((....((((...)))).......)))))).((((((((.((((((......((((((....((((..........))))..........((((((...((.((((((.((((...)))))))))))).))))))...)))))))))))).)))).)))).....))))))...))))))))).)))..((((.(((....(((....)))....))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
................................................................................................................................................................................................................................................................AGTAAAACATATGTTGGTAATAT............................................................................ 23 3 2 1.50 3 3 0 0 0 0 0
.......................................................................................ACGTCGGTGTCAGGTAGAGAGA...................................................................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................TACGGTGTTAATGATGTTTT............................................................................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................AAAATCTTATGTCGGTCTTGGT.................................. 22 3 1 1.00 1 0 0 0 1 0 0
........................................................................................CGCCGGTATCAGGGAGA.......................................................................................................................................................................................................................................................... 17 2 7 0.71 5 2 2 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................................GTCGTTTCTCCAGATTACGAA 21 3 8 0.38 3 0 0 3 0 0 0
....................TGCTTAGCCTCGCTGCGC............................................................................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................TTCTGGGCCTAGTCGACG................. 18 2 5 0.20 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TCCTGGGCCGATCCGAC.................. 17 2 8 0.13 1 0 0 0 0 0 1
....................TGCTTAGCCTCGCTGCG.............................................................................................................................................................................................................................................................................................................................. 17 2 11 0.09 1 0 0 0 1 0 0
...........................................AGACTTCCACTCACAATACT.................................................................................................................................................................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0
...............................................................................................................................................................................................ATGTTTTACTTACTAAACT................................................................................................................................................. 19 2 14 0.07 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:7528953-7529307 + dsi_7796 CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGTCCATCTCGCTCACAC-A-TTTTGCCGCTTGTTTTTGAGCATGCATACACTTTAAAAAAAATGAGTAA-ACA------------------ATGCATATTATATGT--CACAATTA-CTACAAAATGTATGA--TTG------------------------GA-------------------------A------------A---------------------------------------TAATG-AA--CGCGTGTACGGG--------CAGTAAT-------------AATGCTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCATTTT---ATATACA--------------------------------------------------------------------------------CC--------------------TATT-ATAACC---------------------------------------------------TGGATTTCTCCTTTA--TATTATAGAATACAGTCAGCACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTT
droSec2 scaffold_3:3297349-3297701 + CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGTCCATCTCGCTCGCAC-A-TTTTGCCGCTTGTTTTTGAGCATGCATACACTTAAAAAAATCA--GTAA-ACA------------------ATACATATTATATGT--CACAATTA-CTACAAAATGTATGA--TTA------------------------GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGTGTACGGG--------CAGTAAT-------------AATGCTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCATTTT---ATATACA--------------------------------------------------------------------------------CC--------------------TATT-ATAACC---------------------------------------------------TGGATTTCTTCTTTA--TATTACAGAATACAGTCAGCACCAGGACCCAGCTCAGCTGCAACGAGGTCTCAAGCTT
dm3 chr2L:7782999-7783348 + CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGTTGCCATAGGCCATCTCGCTCACAC-A-TTTTGCCGCTTGTTTTTGAGCATGCCTACACTTAGAAAAAAATGGGTGT-ACA-------------------------TTATTTGT--CACAATTA-ATACAAAATGCATGG--TTA------------------------GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGTCTAAAGG--------CAGTAAT-------------AATACTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCCATTATAAT---ACCTATA--------------------------------------------------------------------------------CC--------------------TTAT-ATAACC---------------------------------------------------TGGCTTTCTCCTATATATATTATAGAATACAGTCAGCACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTT
droEre2 scaffold_4929:16703959-16704370 + CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGCCTACGTGAGC-CCCTGCTGCCATAGGCCATCTCGCTCT-AC-A-TTTTGCCGCTTGTTGTTGAGCATGCTTACACTTTGAAAAAT--TGGTAA-ACA------------------ATACTTTTCATTTGT--TACAATTGAA-AAAAAATGTGTTG--TTA------------------------AA-------------------------A------------ACTGAAAAGTTTTGTCGAAATTTAATAAATCAAATTAATTTAATCCTTCACTTATATAATGC---TTATGAAATAAGAACACAAAATGTAAATGCCATGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCACTCG---TTATATA--------------------------------------------------------------------------------CT--------------------TAAT-ATAACC---------------------------------------------------TGGATTTTTGCTATA--TTATATAGAATACAGTCAGCACCAGGACCCGACTCAGCTGCAACGAGGTCTAAAGCTT
droYak3 2L:5118749-5119099 - CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGTCGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGGCCATCTCGCTCTAAC-A-TTTTGCCGCTTTTTGTTGAGCATGCATACACTTAAAAAAAAAATGGTAA-ACA------------------ATACATAATATATTTTTTTAAAAGA-ATACAAAATGTATTG--TTA------------------------CA-------------------------A------------A---------------------------------------TAATCCTACGCGCGTGTAAAGAACATTATACAATAATAATACAAAATGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------------------TAAT-AAAACC---------------------------------------------------TGAATTTTCCCTGTA--TAATATAGAATACAGTCAGTACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTC
droEug1 scf7180000409463:967328-967726 - ATCCAAGAAGCACAAGAAAAACAAGTCGGAGCGGCGTGAGAAATATGAAGGTAAGCCCAACGAAA-----AGTGCTTCGTCTACGTGAGC-CCCCGCTGGCACACGCTATCTCGCTCTATC-A-TTTTGCCGCTTGTTGTTGAGCATGTATGCACTTAGAAAAAATAGGATAC-ACA------------------AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT-------------AATTCTAAAAAGC----ATTAAG-------ACTCATTTCTGTGATTTACTTC------------AACAATTTGAAAG---------------------------------------TTT----TATATCTTTTTATAATATTAATTATATATATAAAAGTATGTCAAATTCTTTTTATGTT--TTGGATAAGTAAAAATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------TTATATTAATC---------------------------------------------------TGATTATACCTTATT--ATTTATAGAATACAGTCAGCACCAGGATCCGGCTCAGCTGCAGCGAGGACTAAAGCTA
droBia1 scf7180000302422:9521601-9521943 + CTCCAAAAAGCACAAGAAGAACAAATCGGAGCGACGCGAGAAATATGAAGGTAGGTCCA-CGAAA------GTGTTTCGTCTGCGTGAGC-CCCTGCTGGCACATGCCATCTCGCTCTTAC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACTTTGAAAAAAGATGGTGA-ACA---------------------------------------------------------------------------------------TACTCGTATATAAAAAAAAATATGGAAAAATTATAAATACTGCTGAAAAATGTG------------------------------------------------G--------TTGTAGT----------------TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA----------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTGCAAATAATA------A------------------------------------------------------------------TGTAACATA---------------A-ACTAATC---------------------------------------------------TAAATGTATCTCGCA--TCATATAGAATACAGTCAGCACCAGGATCCGGCTCAGCTGCAGCGAGGTCTGAAGCTC
droTak1 scf7180000415702:637515-637896 - CTCCAAGAAGCACAAGAAAAACAAATCGGAGCGACGCGAGAAGTATGAAGGTAGGTCCATCG-AA------GTGATTCGTCTACGTGAGC-CCCCGCTGGCACATACCGTCTCGCTCTAAC-G-TTTTCCCGCTTGTTGTTGAGCATGTGTACACAGAGGAAAAAAAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------TAGTAAA-------------A---------TAATTAATTTGAGAAATATTTCTAATTTCTGAAAATTAGTTTTTAAAATTTTTAAACAATTTAAAATAATAAACTTTAATAAATAATAAAAAAACAACTTTAAAAAT--AATTT-------------------------------------------ATTCATTTTCAATTAAATAGTCAAATCAAAATTTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATC--TTATATAGAATACAGTCAGCACCAGGATCCGGGTCAACTGCAACGCGGATTGAAGCTG
droEle1 scf7180000491028:1242504-1242954 - CTCAAAGAAACACAAGAAAAACAAGTCCGAGCGACGCGAGAAATATGAGGGTAAGTGCTTT--TA------GTGGTTCGTCGTCGTGAGC-CCC-GCTGGTACGTGCCTTCTCGCTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACAAAGAAAAATAATGGTGC-ACA------------------AAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------CTAAAATAA----ATCAAA-------AGTAATTTTTGTGGCC----------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTGTTTATAAATAAAGATTTTGTGAGCTATTAACTATTGTTTATAACTTAAATTTTATAAAATTAAAATTAAATGAATAATATTTATGAATATAGAGCAATGAACACCAGAGGCTTTTATTAGTTGGTTGTTTTATTGTAGCACTATCTGT---ACATACA-------------------------------------------------------------------------------ACG--------------------TTTA-ACAACA---------------------------------------------------AGAATCTTTCCCATT--TTATACAGAATACAGTCAGCACCAGGATCCGGCTCAACTGCAGCGAGGACTGAAGCTT
droRho1 scf7180000780001:11865-12213 + CTCCAAGAAGCACAAGAAAAACAAGTCGGAGAGACGCGAGAAATATGAGGGTAAGTGCTAGGAAA------GTGATTCGTCTACGTGAGC-CCCCGCTGGCACATGCCATCTCGCTCTGCC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACAAAGAAAAAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCAAATATTTAGAATTATGGAAAATAATTTTATTTTGCAAAAACTTGAATTATTTAAATTTAAGATTTTTCGAAGAAATATT-CATAACATATATTTTAAAATTGT-A-AGTAACC---------------------------------------------------TAAATCTGCTCTATC--TTATACAGAATACAGTCAGCACCAGGATCCTGCTCAACTGCAGCGAGGACTGAAGTTA
droFic1 scf7180000454115:576878-577170 + ATCAAAGAAGCACAAGAAGAACAAGTCGGAACGGCGAGAAAAATATGAAGGTAAGTCCG--CAAA------GTGTTTCGTCTACGTGAGC-CCCTGCTGGCGCATGCCGTCTCACTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTAAACACTGAGAAAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCA----------------------------------------------------------------------------------------------------------AGTAACCATAATATAACTATCTATTCTGATTCAAAATATTATGAATTCATCTAATATTTATATTTTCCCTGTT--TCATATAGAATACAGTCAGCACCAGGATCCGGCTCAGTTGCAGCGAGGACTGAAGCTG
droKik1 scf7180000302570:274237-274533 - CTCCAAGAAGCACAAGAAGAACAAGTCGGAGCGTCGCGAGAAATATGAGGGTAAGCT--TCGAATAAAACGGGGCTCCGTCTACGTGAGCTCCCCCCTGTGATGCGCCATCTCGCTCTAGCCGCTTTTGCCGCTTGTTGTTGAGCGTGTGTGCACTGGAAAAAAAAAGAA--G-ACTCTTTTAATTAATTTTATATT------------------TAAAAA-----AAA-----TTTATTTAAAAATAAAAATTACTAATTACGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------ATTT-------T--AAATGCAGAATACAGCCAGCACCAGGATCCTGCTCAGCTGCAGCGTGGCCTGAAGCTG
droAna3 scaffold_12943:1523467-1523740 - CTCCAAGAAGCATAAAAAGAATAAGTCGGAGCGCCGCGAGAAATATGAAGGTAAGCGAATTGCAG------AAAACTAGTCTACGTGAGC-CCTCTCCGACATCTGTCTTTTCACTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTGTGCACTGAAAAAAATTAGAATAG-A--------------------AT------------------TAAAGAA-AAAAAATGTTTTT--TTTAA-TGCGAAAATTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAATACACT--CTTTGTAGAATACAGTCAACACCAGGATCCAGCGCAACTACAGCGCGGGCTTAAGTTA
droBip1 scf7180000396728:1678598-1678885 + CTCCAAGAAGCACAAAAAGAATAAGTCGGAGCGACGCGAGAAATATGAAGGTAAGCGAGTTGCAG------AAAACTAGTCTACGTGAGC-CCTCTCCGACATCTGTCTTTTCACTCGAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTGTACACTGAAAGAAATAAATC--GAACTCTTGAAAGATTTTTCAAATA------------------AAATAA-----AAA-----TT--TTTAA-TGTGAAAATGGATTCTAACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------TTTC-------T--CTTTGTAGAATACAGCCAACACCAGGATCCAGCGCAACTGCAGCGCGGGTTAAAGTTA
dp5 4_group3:1669597-1669720 + CTCCAAGAAGCACAAGAAGAACAAATCAGAGCGCCGGGATAAATATGAAGGTAAGCGGATGG-CG------CAGCCGCCCCGACGA----------------GGA--GACACCACTGACAC-ATTTTTGCCGCTTGCGTTCGTTCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:3140645-3140768 + CTCCAAGAAGCACAAAAAGAACAAATCAGAGCGCCGGGATAAATATGAAGGTAAGTGGATGG-CG------CAGCCGCCCCGACGA----------------GGA--GACACCACTGACAC-ATTTTTGCCGCTTGCGTTCGTTCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:2718657-2718710 - TTCTAAGAAGCATAAGAAGAACAAGTCGGAACGGCGTGAGAAGTACGAAGGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13246:2083470-2083543 - TTCTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------CAAATTT-------C--TTTCACAGAATATAGTCAGCACCAGGATCCTGCGCAATTGCAGCGTGGCCTTAAGCTA
droMoj3 scaffold_6500:3897169-3897225 + ATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAATATAGCCAGCATCAGGATCCGGCACAGCTGCAACGTGGTCTGAAGCTG
droGri2 scaffold_15126:3848916-3849009 + CATT-------------------------------------------------------------------------------------------------------------TTTCATAC-GTTGTTTACACTTGCATTTGTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTGTAGAATATAGCCAACACCAGGATCCCGCACAATTGCAACGCGGCCTGAAGCTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGTCCATCTCGCTCACAC-A-TTTTGCCGCTTGTTTTTGAGCATGCATACACTTTAAAAAAAATGAGTAA-ACA------------------ATGCATATTATATGT--CACAATTA-CTACAAAATGTATGA--TTG------------------------GA-------------------------A------------A---------------------------------------TAATG-AA--CGCGTGTACGGG--------CAGTAAT-------------AATGCTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCATTTT---ATATACA--------------------------------------------------------------------------------CC--------------------TATT-ATAACC---------------------------------------------------TGGATTTCTCCTTTA--TATTATAGAATACAGTCAGCACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCAGGACCCGGCTCAGCTGCAA...............2811.00100000000000010000
................AAAAACAAGTCGGAGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
..............................GCGACGCGAGAAATATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCAACGAGGTCTAAA....2011.00100000000010000000
droSec2
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGTCCATCTCGCTCGCAC-A-TTTTGCCGCTTGTTTTTGAGCATGCATACACTTAAAAAAATCA--GTAA-ACA------------------ATACATATTATATGT--CACAATTA-CTACAAAATGTATGA--TTA------------------------GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGTGTACGGG--------CAGTAAT-------------AATGCTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCATTTT---ATATACA--------------------------------------------------------------------------------CC--------------------TATT-ATAACC---------------------------------------------------TGGATTTCTTCTTTA--TATTACAGAATACAGTCAGCACCAGGACCCAGCTCAGCTGCAACGAGGTCTCAAGCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................CTGTGTCTACGTGAGC-CCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGTTGCCATAGGCCATCTCGCTCACAC-A-TTTTGCCGCTTGTTTTTGAGCATGCCTACACTTAGAAAAAAATGGGTGT-ACA-------------------------TTATTTGT--CACAATTA-ATACAAAATGCATGG--TTA------------------------GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGTCTAAAGG--------CAGTAAT-------------AATACTATTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCCATTATAAT---ACCTATA--------------------------------------------------------------------------------CC--------------------TTAT-ATAACC---------------------------------------------------TGGCTTTCTCCTATATATATTATAGAATACAGTCAGCACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................CAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGTCGGAGCGACGCGAGAAATATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGAAAAACAAGTCGGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCACAAGAAAAACAAGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...CAAGAAGCACAAGAAAAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAGGACCCGGCTCAGCT...................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTCGGAGCGACGCGAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGCGACGCGAGAAATATGAAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................G--TTA------------------------GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGAGCGACGCGAGAAATATGAAGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GTGAGC-CCCTGTTGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTCGGAGCGACGCGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGACCCGGCTCAGCTG..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAAACAAGTCGGAGCGACGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTGAGTGAAATGAAA------GTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGACGCGAGAAATATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTGAAATGAAA------GTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTGAAATGAAA------GTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................ATATGAAGGTGAGTGAAATGAAA------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................GGTGAGTGAAATGAAA------GTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATACAGTCAGCACCAGGA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTGAAATGAAA------GTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................AGTCGGAGCGACGCGAGAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCAAGAAGCACAAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........GCACAAGAAAAACAAGTCGGAGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGAAATGAAA------GTGCTGTGTCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTCAGCACCAGGACCCGGC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGAAAAACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAAAAACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................AC-A-TTTTGCCGCTTGTTTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................CTACGTGAGC-CCCTGTTGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAACAAGTCGGAGCGACGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................AAAAACAAGTCGGAGCGACGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGAAATGAAA------GTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................GCTGTGTCTACGTGAGC-CCCTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GA-------------------------A------------A---------------------------------------TAATC-TA--CGCGTCTAAAGG--------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................GTGAGTGAAATGAAA------GTGCTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................AAAAACAAGTCGGAGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................ATGAAGGTGAGTGAAATGAAA------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTGAAATGAAA------GTGCTGTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............GAAAAACAAGTCGGAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAAGTCGGAGCGACGCGAGAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTGAGTGAAATGAAA------GTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................GTGAGTGAAATGAAA------GTGCTGTGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................AACAAGTCGGAGCGACGCGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCCGGCTCAGCTGCA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGAAATGAAA------GTGCTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............AAGAAAAACAAGTCGGAGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAGTGAAATGAAA------GTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTCGGAGCGACGCGAGAAATATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACAAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AATGAAA------GTGCTGTGTCTACGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGGACCCGGCTCAGCTGCAA...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCACCAGGACCCGGCT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTCGGAGCGACGCGAGAAATATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTCGGAGCGACGCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACAAGTCGGAGCGACGCGAGAAATATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTCGGAGCGACGCGAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGACGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGCCTACGTGAGC-CCCTGCTGCCATAGGCCATCTCGCTCT-AC-A-TTTTGCCGCTTGTTGTTGAGCATGCTTACACTTTGAAAAAT--TGGTAA-ACA------------------ATACTTTTCATTTGT--TACAATTGAA-AAAAAATGTGTTG--TTA------------------------AA-------------------------A------------ACTGAAAAGTTTTGTCGAAATTTAATAAATCAAATTAATTTAATCCTTCACTTATATAATGC---TTATGAAATAAGAACACAAAATGTAAATGCCATGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACCGCTCACTCG---TTATATA--------------------------------------------------------------------------------CT--------------------TAAT-ATAACC---------------------------------------------------TGGATTTTTGCTATA--TTATATAGAATACAGTCAGCACCAGGACCCGACTCAGCTGCAACGAGGTCTAAAGCTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGCGTCGCGAGAAATATGAAGGTGAGTGAAATGAAA------GTGCTGTGTCTACGTGAGC-CCCTGCTGCCATAGGCCATCTCGCTCTAAC-A-TTTTGCCGCTTTTTGTTGAGCATGCATACACTTAAAAAAAAAATGGTAA-ACA------------------ATACATAATATATTTTTTTAAAAGA-ATACAAAATGTATTG--TTA------------------------CA-------------------------A------------A---------------------------------------TAATCCTACGCGCGTGTAAAGAACATTATACAATAATAATACAAAATGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------------------TAAT-AAAACC---------------------------------------------------TGAATTTTCCCTGTA--TAATATAGAATACAGTCAGTACCAGGACCCGGCTCAGCTGCAACGAGGTCTAAAGCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCCGGCTCAGCTGCAACGAGGT.........2611.00110000000000
droEug1
ATCCAAGAAGCACAAGAAAAACAAGTCGGAGCGGCGTGAGAAATATGAAGGTAAGCCCAACGAAA-----AGTGCTTCGTCTACGTGAGC-CCCCGCTGGCACACGCTATCTCGCTCTATC-A-TTTTGCCGCTTGTTGTTGAGCATGTATGCACTTAGAAAAAATAGGATAC-ACA------------------AAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT-------------AATTCTAAAAAGC----ATTAAG-------ACTCATTTCTGTGATTTACTTC------------AACAATTTGAAAG---------------------------------------TTT----TATATCTTTTTATAATATTAATTATATATATAAAAGTATGTCAAATTCTTTTTATGTT--TTGGATAAGTAAAAATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------TTATATTAATC---------------------------------------------------TGATTATACCTTATT--ATTTATAGAATACAGTCAGCACCAGGATCCGGCTCAGCTGCAGCGAGGACTAAAGCTASizeHit CountTotal NormTotal
No Reads
droBia1
CTCCAAAAAGCACAAGAAGAACAAATCGGAGCGACGCGAGAAATATGAAGGTAGGTCCA-CGAAA------GTGTTTCGTCTGCGTGAGC-CCCTGCTGGCACATGCCATCTCGCTCTTAC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACTTTGAAAAAAGATGGTGA-ACA---------------------------------------------------------------------------------------TACTCGTATATAAAAAAAAATATGGAAAAATTATAAATACTGCTGAAAAATGTG------------------------------------------------G--------TTGTAGT----------------TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA----------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTGCAAATAATA------A------------------------------------------------------------------TGTAACATA---------------A-ACTAATC---------------------------------------------------TAAATGTATCTCGCA--TCATATAGAATACAGTCAGCACCAGGATCCGGCTCAGCTGCAGCGAGGTCTGAAGCTCSizeHit CountTotal NormTotal
No Reads
droTak1
CTCCAAGAAGCACAAGAAAAACAAATCGGAGCGACGCGAGAAGTATGAAGGTAGGTCCATCG-AA------GTGATTCGTCTACGTGAGC-CCCCGCTGGCACATACCGTCTCGCTCTAAC-G-TTTTCCCGCTTGTTGTTGAGCATGTGTACACAGAGGAAAAAAAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------TAGTAAA-------------A---------TAATTAATTTGAGAAATATTTCTAATTTCTGAAAATTAGTTTTTAAAATTTTTAAACAATTTAAAATAATAAACTTTAATAAATAATAAAAAAACAACTTTAAAAAT--AATTT-------------------------------------------ATTCATTTTCAATTAAATAGTCAAATCAAAATTTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATC--TTATATAGAATACAGTCAGCACCAGGATCCGGGTCAACTGCAACGCGGATTGAAGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTCAAAGAAACACAAGAAAAACAAGTCCGAGCGACGCGAGAAATATGAGGGTAAGTGCTTT--TA------GTGGTTCGTCGTCGTGAGC-CCC-GCTGGTACGTGCCTTCTCGCTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACAAAGAAAAATAATGGTGC-ACA------------------AAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------CTAAAATAA----ATCAAA-------AGTAATTTTTGTGGCC----------------------------------------------------------------------------------------------------------------------------------------------------ATAATTTTTGTTTATAAATAAAGATTTTGTGAGCTATTAACTATTGTTTATAACTTAAATTTTATAAAATTAAAATTAAATGAATAATATTTATGAATATAGAGCAATGAACACCAGAGGCTTTTATTAGTTGGTTGTTTTATTGTAGCACTATCTGT---ACATACA-------------------------------------------------------------------------------ACG--------------------TTTA-ACAACA---------------------------------------------------AGAATCTTTCCCATT--TTATACAGAATACAGTCAGCACCAGGATCCGGCTCAACTGCAGCGAGGACTGAAGCTTSizeHit CountTotal NormTotal
No Reads
droRho1
CTCCAAGAAGCACAAGAAAAACAAGTCGGAGAGACGCGAGAAATATGAGGGTAAGTGCTAGGAAA------GTGATTCGTCTACGTGAGC-CCCCGCTGGCACATGCCATCTCGCTCTGCC-G-TTTTGCCGCTTGTTGTTGAGCATGTATACACAAAGAAAAAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCAAATATTTAGAATTATGGAAAATAATTTTATTTTGCAAAAACTTGAATTATTTAAATTTAAGATTTTTCGAAGAAATATT-CATAACATATATTTTAAAATTGT-A-AGTAACC---------------------------------------------------TAAATCTGCTCTATC--TTATACAGAATACAGTCAGCACCAGGATCCTGCTCAACTGCAGCGAGGACTGAAGTTASizeHit CountTotal NormTotal
No Reads
droFic1
ATCAAAGAAGCACAAGAAGAACAAGTCGGAACGGCGAGAAAAATATGAAGGTAAGTCCG--CAAA------GTGTTTCGTCTACGTGAGC-CCCTGCTGGCGCATGCCGTCTCACTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTAAACACTGAGAAAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCA----------------------------------------------------------------------------------------------------------AGTAACCATAATATAACTATCTATTCTGATTCAAAATATTATGAATTCATCTAATATTTATATTTTCCCTGTT--TCATATAGAATACAGTCAGCACCAGGATCCGGCTCAGTTGCAGCGAGGACTGAAGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
CTCCAAGAAGCACAAGAAGAACAAGTCGGAGCGTCGCGAGAAATATGAGGGTAAGCT--TCGAATAAAACGGGGCTCCGTCTACGTGAGCTCCCCCCTGTGATGCGCCATCTCGCTCTAGCCGCTTTTGCCGCTTGTTGTTGAGCGTGTGTGCACTGGAAAAAAAAAGAA--G-ACTCTTTTAATTAATTTTATATT------------------TAAAAA-----AAA-----TTTATTTAAAAATAAAAATTACTAATTACGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------ATTT-------T--AAATGCAGAATACAGCCAGCACCAGGATCCTGCTCAGCTGCAGCGTGGCCTGAAGCTGSizeHit CountTotal NormTotal
No Reads
droAna3
CTCCAAGAAGCATAAAAAGAATAAGTCGGAGCGCCGCGAGAAATATGAAGGTAAGCGAATTGCAG------AAAACTAGTCTACGTGAGC-CCTCTCCGACATCTGTCTTTTCACTCTAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTGTGCACTGAAAAAAATTAGAATAG-A--------------------AT------------------TAAAGAA-AAAAAATGTTTTT--TTTAA-TGCGAAAATTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAATACACT--CTTTGTAGAATACAGTCAACACCAGGATCCAGCGCAACTACAGCGCGGGCTTAAGTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGTCAACACCAGGATCC............................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGTCAACACCAGGATCCAGCG........................2511.001000001
droBip1
CTCCAAGAAGCACAAAAAGAATAAGTCGGAGCGACGCGAGAAATATGAAGGTAAGCGAGTTGCAG------AAAACTAGTCTACGTGAGC-CCTCTCCGACATCTGTCTTTTCACTCGAAC-G-TTTTGCCGCTTGTTGTTGAGCATGTGTACACTGAAAGAAATAAATC--GAACTCTTGAAAGATTTTTCAAATA------------------AAATAA-----AAA-----TT--TTTAA-TGTGAAAATGGATTCTAACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------TTTC-------T--CTTTGTAGAATACAGCCAACACCAGGATCCAGCGCAACTGCAGCGCGGGTTAAAGTTASizeHit CountTotal NormTotal
No Reads
dp5
CTCCAAGAAGCACAAGAAGAACAAATCAGAGCGCCGGGATAAATATGAAGGTAAGCGGATGG-CG------CAGCCGCCCCGACGA----------------GGA--GACACCACTGACAC-ATTTTTGCCGCTTGCGTTCGTTCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................GACGA----------------GGA--GACACCACTGACAC-ATTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
droPer2
CTCCAAGAAGCACAAAAAGAACAAATCAGAGCGCCGGGATAAATATGAAGGTAAGTGGATGG-CG------CAGCCGCCCCGACGA----------------GGA--GACACCACTGACAC-ATTTTTGCCGCTTGCGTTCGTTCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTCTAAGAAGCATAAGAAGAACAAGTCGGAACGGCGTGAGAAGTACGAAGGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................GAACAAGTCGGAACGGCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
TTCTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------CAAATTT-------C--TTTCACAGAATATAGTCAGCACCAGGATCCTGCGCAATTGCAGCGTGGCCTTAAGCTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTCAGCACCAGGATCCTGC.........................2211.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATCCTGCGCAATTGCA................2011.001000000000000000000000100000000000000000000000000000000000000000
droMoj3
ATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAATATAGCCAGCATCAGGATCCGGCACAGCTGCAACGTGGTCTGAAGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCATCAGGATCCGGCACA......................2111.001000010
droGri2
CATT-------------------------------------------------------------------------------------------------------------TTTCATAC-GTTGTTTACACTTGCATTTGTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTGTAGAATATAGCCAACACCAGGATCCCGCACAATTGCAACGCGGCCTGAAGCTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 11:21 AM