ID:

dsi_7778

 Coordinate:

3r:17896166-17896315 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.4 -6.9

Flybase annnotation

three_prime_UTR [3r_17895644_17896373_-]; exon [3r_17895644_17896508_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
GTGGACGCCAAGGAACAATCATCGTAAAAGCACATACAATCCCATTCATAGTACGAGTAATACATATATTAATGCGAACTAGCGCAGTTTTACAATGCAACCTTTTTAGCGTTTGGGGAGCATTTGTACCTTGTTATACAAAATCAACAGAACCATTTAGAAAACATAAACACACACTTTACACACAATTACGCGCATTTATCATCAAAATCTTGCATAGAAAAAAAATTTGCAAAAACAGTTGATTGTC
******************************************************************************************************(((((((..((((..((...((((((........)))))).))..)))).....)))))))........******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
...............................................................................................................................................TCAACAGAACCATTCAGAAGACACAAACA.............................................................................. 29 3 1 2.00 2 0 2 0 0 0 0 0 0
......................................................................................................TTTTTAGCGTTTGGGGAGC................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................CAACAGAACCATTTAGAAAACATAAAC............................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
................AATCATCGTAAAAGCACATACAATCCCAT............................................................................................................................................................................................................. 29 0 1 2.00 2 0 2 0 0 0 0 0 0
.............................................................................................................................................................TAGAAAACATAAACACACACTT....................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................................TGTACCTTGTTATACAAAATCAACAGA................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................CAACAGAACCATTTAGAAAAC..................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AATTTGCAAAAACAGTTGATTGTC 24 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CAAAAACAGTTGATTGTC 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................CAACCTTTTTAGCGTTTGGGGAG.................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................TGCGAACTAGCGCAGTTTTACAATGCA....................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................AAATTTGCAAAAACAGTTGATTGTC 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................GCGAACTAGCGCAGTTTTACAAT.......................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................TATACAAAATCAACAGAACCATTCAGA......................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0
..................TCATCGTAAAAGCACATACAATCCCA.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
GTGGACGCCAAGGAACAATCATCGTAA............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.TGGACGCCAAGGAACAATCATCGTAAA.............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................................................................TTAGCGTTTGGGGAGCATTTGTACCT....................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
.................................................AGTACGAGTAATACATATATTAATGCGA............................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................AATACATATATTAATGCGAACTAG........................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAAAAATTTGCAAAAACAGTTG...... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................ATTTGCAAAAACAGTTGATTGTC 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................CGGGAGCATTTGTACT........................................................................................................................ 16 2 20 0.80 16 0 0 0 16 0 0 0 0
...................................................................................................................GGGAGCATTTGTACT........................................................................................................................ 15 1 4 0.50 2 0 0 0 2 0 0 0 0
........................................................................................................TTTGGCGTTTGGGGAGC................................................................................................................................. 17 1 3 0.33 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................TAATCTTGCATCGAAAAAA........................ 19 2 4 0.25 1 0 0 0 0 0 0 0 1
.........................................................................GCGGACTAGCGCAGT.................................................................................................................................................................. 15 1 4 0.25 1 0 0 0 0 0 1 0 0
...GACGACAAGGAATAATCA..................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 1
..................................................................................................................CGGGAGCATTTGTAC......................................................................................................................... 15 1 5 0.20 1 0 0 0 1 0 0 0 0
.................................................................................................................TCGGGAGCATTTGTACT........................................................................................................................ 17 2 8 0.13 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................CGTTACACACAATTTAGCG....................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 1
...........................................................................................................................................................................ACACCCTATACACCCAATT............................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CACCTGCGGTTCCTTGTTAGTAGCATTTTCGTGTATGTTAGGGTAAGTATCATGCTCATTATGTATATAATTACGCTTGATCGCGTCAAAATGTTACGTTGGAAAAATCGCAAACCCCTCGTAAACATGGAACAATATGTTTTAGTTGTCTTGGTAAATCTTTTGTATTTGTGTGTGAAATGTGTGTTAATGCGCGTAAATAGTAGTTTTAGAACGTATCTTTTTTTTAAACGTTTTTGTCAACTAACAG
*******************************************************************************(((((((..((((..((...((((((........)))))).))..)))).....)))))))........****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.........................................................................................................................................TGTTTTAGTTGTCTTGGTAAA............................................................................................ 21 0 1 2.00 2 2 0 0 0 0
.....GCGGTTCCTTGTTAGTAGCAT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................TTTAGTTGTCATGCTAAAGCTT........................................................................................ 22 3 3 0.33 1 0 0 1 0 0
...........................................................................................................................................TTCTAGTTGTCTTAGTAAA............................................................................................ 19 2 4 0.25 1 0 0 0 1 0
...............................................................................................................................................................................TGAAATGTGTCTTAATG.......................................................... 17 1 4 0.25 1 0 0 0 0 1
................................................ATCATGCTCATTATA........................................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 1 0
................................................................................................................................AGAACAATGTATTTTAGTTGT..................................................................................................... 21 3 18 0.06 1 0 0 1 0 0
.....................................................................................................................................................................................................................................AACGTTTTTGTCAGC...... 15 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:17896116-17896365 - dsi_7778 GTGG-ACGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------AGA-------ACCATTTAGAAAACATAA-----AC--ACACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A----------------------------------------AAAAATTTGCAAA-------------AA-CAGTTGATTG---TC
droSec2 scaffold_0:18723327-18723575 - GTGG-ACGCCAA-GG-AACAATCAT-----CGT---ATAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------AGA-------ACCATTTAGAAGACACAA-----AC--AGACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A-----------------------------------------AAAAATTGCAAA-------------AA-CAGTTGATTG---TC
dm3 chr3R:18369885-18370136 - GTGG-ATGCCAA-GA-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AAAA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ACCATATAGAAGACAAAA-----AC--ACACA--CTTAACACACAATTACACGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A---A----------------------------------A-AAAAAATTGCAAA-------------AC-CAGTTGATTG---TC
droEre2 scaffold_4820:9706668-9706911 + GTAG-ATGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATA-----------TTAATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TGTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ACCATATTCAAGACACAA-----AC--ACACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTA-----ACATATAA-----A----------------------------------------AAAAGATAGCAAA-------------AA-CAGTTGATTG---TC
droYak3 3R:19217314-19217567 - CTGG-ATGCCAA-GG-AACAATCAT-----CTT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATA-----------TTAATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCACTTTTACAATGCAACC-TGTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ATCATATTCAAGACACAATTCAAAC--AAACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----ACATAT-----ACA-----------------------------------------AAAAATAGCAAAAACAAA-------AA-CAGTTGATTG---TC
droEug1 scf7180000409768:498439-498667 - GTAG-ATGCCAA-GG-AACAATCAT-----CGG--AAAAAGCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------CA---------TA---CAT------------AAATAATTG----CGAACTAGAAAAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACAAAATTAAC-------------------------------------GGA-------TCG-------AAACACAA-----AC--TC--G-----C-----GAATTAGGCGCATTTA-TCATC------AAAATCTT-----ACATAC-------A----------------------------------------AAAACCTAGCAAA--------------A-CAGTTGATTG---TC
droBia1 scf7180000302402:5354793-5355025 + GCAG-ATGCCAA-GG-AACAATCAC-----CGT---GAAAGCACA---------------TA-CA-----------ATC---CCCTTCATT------------TCATA-------------------------------------------------------------------------------CA---------AA-------------------TAATAATG----CGAACTAGTGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATTCAAATTCGAC-------------------------------------GGA-------ACCATATTCAAGAGACAT-----AC--ACAGT-----C-----AAATTCCGCGTATTTA-GCATC------AAAATCTT-----ACATAA-------A----------------------------------------GAAACCTAGCAAA-------------CA-CAGTTGATTG---TC
droTak1 scf7180000415711:650331-650576 + GTGG-ACGCCAT-GG-AACAATCAT-----CGT---AAAATCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------CA---------TA-------------------TAATGATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTCGGTGAGCATTTGTACCTTGT----TATTCAAATTCGACAGAAT--C-----------------------AGAATCGGA-------ATCAAATCCAAGACACAA-----AC--ACACA-----C-----AAATTACGCGCATTTA-TCATC------AAAATCTT-----ACATAC-------A----------------------------------------AACACCTAGCAAA-------------CA-CAGTTGATTG---TC
droEle1 scf7180000491280:4398059-4398304 + GCGG-AGGCCAA-GG-AACAATCAT-----CGT---AATAGCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------AA---------CA-------------------TATTGTTG----CGAAGTAGCGCAGTTTTACAATGCAACC-TTTTTTGCG--TTAGGTGAGCATTTGTACCTTGT----TATACAAATTCGAC-------------------------------------GGA-------ACCACACGCAAGACGCAA-----AAACACACA-----C-----GAATTACGCGCATTTA-TCATC------AAAATCTT-----ACAT----CGTATAAT-G----------------------------------G-AAAAACTAGCAAAA-GA---------AA-AAGTTGATTG---TC
droRho1 scf7180000779538:639849-640095 + GCGG-ATGGCAA-GA-AACAATCAT-----CGT---AAAAGCACA---------------TT-CA-----------ATC---CCATACATT-----------TTC-CA-------------------------------------------------------------------------------ATAACATTATACA-------------------AATTATTG----TGAAGTAGCACACTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGCGCATTTGTACCTTGT----TAAACATATTCGAC-------------------------------------GGA-------ATCATAATCAAGACACAA-----AC--ACA-------C-----GAATTACGCGCATTTA-TCATC------AAAATCTT-----TCAT----CTTACAAA-A----------------------------------G-AAAACCTAGCAAA-------------AA-CAGTTGATTG---TC
droFic1 scf7180000454106:1518090-1518328 - GTGG-ATGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATACATT------------TCACA-------------------------------------------------------------------------------TA---------TA-------------------TATT-ACG----CGAATTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACAAATTCGAT-------------------------------------GGA-------ACTATATTCAAGACCCAG-----GC--ACACA-----C-----AAGTTACGCGCATTTA-TCATC------AAAATCGA-----ACAT----CATTCTAA-A----------------------------------G-AGAACTTAGCAAA-------------AA-CAGTTGATTG---TC
droKik1 scf7180000302706:1603313-1603570 - GTGTAATGCCAA-GG-AACAATCAT-----CAG--AAAGAGTACCCACA-----------CA-CA-----------ATCTACGCATACTTA-----------CTCATG----------------------------------------------------------------------------AAACA---------TT-------------------AAATAGTG----CGAACTAGCGCAGTTTTACAATGCAGCC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACGAGTCCGGC-------------------------------------AGA-------AGCAAATTCACGACAAAA-----AGAAACATA--CTTC-----AGATTATGCGCATTTA-TCATT------AAA-TCCTGCT--AAAT----TATACAA--A----------------------------------G-CAAAAGTAGTGAA--------------A-CGGTTGATTG---TC
droAna3 scaffold_13340:21783410-21783698 - GCGG-AGGCCAAAAG-AACAATCAT-----ATT---A----CACCTATACACACATCCCC--CAAACACACAGCCCCGACACAC-----------ATACATACCTA----------------------------------------------------------------------------------------------AACCAACAAAAAACCGTTACATTTTTG----CGAAATAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATAAAAGTCCAAC-------------------------------------GGA-------ACCAAATTCAAGACACAA-----TT------G-----A-----AGATTACTCGCATTTA-TCATC------AAAATCTG-TCACCCAT----TG----AAAGGCA---------------------------------AAAAGTTAGCGAAAAGGAAAAAAT-A--CCATTTGATTG---TC
droBip1 scf7180000396583:421092-421365 + GCGG-AGGCCAAAAG-AACAATCAT-----CAT---AATA---CA------CACCCCCCC-C-CAAC-----------ACACAC-----------ATATATATTTA----------------------------------------------------------------------------------------------AAGCAACAAAAATCCGATACATTTTTG----CGAAATAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATGAAAGTCCAAC-------------------------------------GGA-------ACCAAATTCAAGACACAT-----TT------G-----A-----GGATTACTCGCATTTA-TCATC------AAAATCTG-TCATCCAT----TG----AAAGGCA---------------------------------AAAAGTTAGCTAAAAGGAAAAAATAA--CCATTTGATTG---TC
dp5 2:3308443-3308696 + GTGG-ATACTGA-GGATACAATCATACAATCAT---A--AATACA---------------TA-GA-----------ATC---CCACACATA---CGAGTATATTCACA-------------------------------------------------------------------------------TA---------CA-------------------CAATACTG----CGATCTAGCGCAATTTTACAATGCAACCGTTTTTAGCG--TTTGGTGAGCATCTGTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGCATAA---------------------------TTTACGCGCATTTA-TCATCCAATTCAAAATCGT-----TCAT----TATACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTTAATTA---TC
droPer2 scaffold_7:1032821-1033074 - GTGG-ATACTGA-GGATACAATCATACAATCAT---A--AATACA---------------TA-GA-----------ATC---CCACACATA---CGAGTATATTCACA-------------------------------------------------------------------------------TA---------CA-------------------CAATACTG----CGATCTAGCGCAATTTTACAATGCAACCGTTTTTAGCG--TTTGGTGAGCATCTGTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGCATAA---------------------------TTTACGCGCATTTA-TCATCCAATTCAAAATCGT-----TCAT----TATACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTTAATTA---TC
droWil2 scf2_1100000004943:15255106-15255436 + GTTG-ATACCAA-GGATACAATCAT-----ATTTATATAAACACCCACACACATACTCCT--CAGAG-------------------ACACAC-----T----TAA-TATTC---ACCCACACACACACACAC--CATACCGCACACACACACACACACACACACACAT-TCAAGCATACACATAAAAGA----------A-------------------CAATTTGT----CGATTTAGCGCAGTTTTACAATGCAACCATTTTTAGCGTGTTTGGTGAGCATTTGTACCTTGT----TATACGAATTATAG-----ATA-----------------------TATAC-CAACTCTCCTATCATATTC--------------------------------------------------------------A-AATTGT-----GCCCAAAA---------AGAAAAAGATCCACAAATTTCATAGCTAAACAAAAAAGAA----AG--AA-------------AT-CAATTAATTG---TC
droVir3 scaffold_13047:18625290-18625579 + GCAA-ATTCAAA-TCTTACA----------------TTAGGCACA---------------TC-AA-----------ATC---ATATGCACAC-----------TC------------CATACACACACACACACATACACAAACACCAACATACACACACACACA----------------------CA---------TC-------------------TATCTATATGGAAAATCTATCGCAGTTTGACAATGCGGCC-ATTTTAGTG--TTTGGCCCGCATTCGTTCATTGT----TGTTTGGCTAAAATAAG--AAA----------------------------AATA-------CCTACATTCAGGATGAAT-----AC--AAGGACATCT---------GTTTTCGGATTGA-TTATT-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------ATTACTTAGCAAT-------------AC-CCGTTTATTATGATC
droMoj3 scaffold_6540:19795663-19795931 - GCAA-CTACAAA-AACTACAATCGT-----CAC---ATACAATCA--TACACGCGCACTC-CCGAGAAAACAAACCATCTGCAC---------------------ATA-------------------------------------------------------------------------------CA---------GG---CAC-------------CAAAACTG--AGAGACGTAGCGCCGTTTGACAATGCAACC-ATTTTAGCG--TTCGGTACGCATTTGTTCTTTGT----TAATTGGATTCATA-----CAAAAAGCCAACATTCATGATGGATGAAGTA-TAA-----------------------------------------TCT---------ATTTCCGGAATGG-TGATT-----GCTAAACTT-----ACGTTATT-----A----------------------------------------AATACTTAGGAAAA------------CCAC-ATTTATTATAATC
droGri2 scaffold_14830:3758814-3759120 + GCAA-ATATTAA-T-----AATCGC-----TAT---AGTTACACA---------------CA-CA-----------ATC---ATATGCACT-----------TAT-TAATTAAAATCCATACACACAGAAACAGAAAAACACACACCCACACACACTATCACACACAGAACAAACACAC------------------------------------------TCATCA---CAAACTTAGCGCAGTTTAACAATGCAGCC-ATTTTAGGG--TTTGGCATGCATTTGGACTTTCTTTATTTTTT------GTT-----CAAAACGA-------------------------AA-------ATTTTGTTGATG---AAT-----CC--ATGGATGTGT---------GTACCCGGAATTAAGAATT-----AAAAAAAAT-----GCAT----TATATAA---------------------------------------AATACTTAGAAAA-------------CC-ACGTTTATTATAATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTGG-ACGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------AGA-------ACCATTTAGAAAACATAA-----AC--ACACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A----------------------------------------AAAAATTTGCAAA-------------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................1912.00202000000000000000
....................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------AGA-------ACCATTTAGAAAACATAA-----AC--...........................................................................................................................................................2712.00202000000000000000
...................AATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000000002000
.............................................................................................................................................................................................................................................................................................................................................................................TAGAAAACATAA-----AC--ACACA--CTT.................................................................................................................................................2211.00100010000000000000
............................................................................................................................................................................................................................................................................................TGTACCTTGT----TATACAAAATCAAC-------------------------------------AGA-------......................................................................................................................................................................................2711.00100000001000000000
....................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------AGA-------ACCATTTAGAAAAC........................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCAAA-------------AA-CAGTTGATTG---TC2411.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA-------------AA-CAGTTGATTG---TC1811.00101000000000000000
..............................................................................................................................................................................................................................................................CAACC-TTTTTAGCG--TTTGGGGAG.....................................................................................................................................................................................................................................................................2311.00100010000000000000
.................................................................................................................................................................................................................................TG----CGAACTAGCGCAGTTTTACAATGCA.............................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGCAAA-------------AA-CAGTTGATTG---TC2511.00100000001000000000
..................................................................................................................................................................................................................................G----CGAACTAGCGCAGTTTTACAAT................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.....................TCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
GTGG-ACGCCAA-GG-AACAATCAT-----CGT---AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
.TGG-ACGCCAA-GG-AACAATCAT-----CGT---AAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................TTAGCG--TTTGGGGAGCATTTGTACCT..........................................................................................................................................................................................................................................................2611.00100000000100000000
..........................................................................................AGTACGAGT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGA...................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAG..............................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------AAAAATTTGCAAA-------------AA-CAGTTG.........2211.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAAA-------------AA-CAGTTGATTG---TC2311.00101000000000000000
...................................................................................................................................................................................................................................................................................GGGAGCATTTGTACT...........................................................................................................................................................................................................................................................1540.50200000002000000000
droSec2
GTGG-ACGCCAA-GG-AACAATCAT-----CGT---ATAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------AGA-------ACCATTTAGAAGACACAA-----AC--AGACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A-----------------------------------------AAAAATTGCAAA-------------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................GCAACC-TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2514.0040310
...........................................................................................................................................................................................................................................................ATGCAACC-TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2713.0030120
...............................................................................................................................................................................................................................................................AACC-TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2312.0020110
...........A-GG-AACAATCAT-----CGT---ATAAGCACA---------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
............................................................................................................................................................................................................................................TAGCGCAGTTTTACAATG...............................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................GT-----AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAAC.................................................................................................................................................................................................................................................................................................................2311.0010010
..............................................................................................................................................................................................................................................................CAACC-TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2411.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA-------------AA-CAGTTGATTG---TC1811.0011000
....................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------AGA-------ACCATTTAGAAGACAT......................................................................................................................................................................2311.0010010
.....................................................................................................................................................................................................................................................................TTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................CATTTAGAAGACACAA-----AC--AGA........................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................TTTTTAGCG--TTTGGGGAGCA...................................................................................................................................................................................................................................................................2011.0010100
....................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------AGA-------ACCATTTAGAAGA.........................................................................................................................................................................2011.0010010
..GG-ACGCCAA-GG-AACAATCAT-----CGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
....................................ATAAGCACA---------------TA-CA-----------ATC---CCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................TTACACACAATTACGCGCAT..............................................................................................................................2011.0011000
.........................................................................................................ATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGT........................................................................................................................................................................................................................................................................................................2911.0010010
.....................................................................................................................................................................................................................................................................................................................AAC-------------------------------------AGA-------ACCATTTAGAAGA.........................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................GAGCATTTGTACCTTGT----TATACAAAAT.........................................................................................................................................................................................................................................2711.0010010
......CGCCAA-GG-AACAATCAT-----CGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................................ACTAGCGCAGTTTTACAATGC..............................................................................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................................................................................................................................AATGCAACC-TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2811.0010100
...........................................................................................................................................................................................................................................................................................................................................................................TTTAGAAGACACAA-----AC--AGACA--CTT.................................................................................................................................................2411.0011000
....................................................................................................................................................................................................................................................................TTTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................1911.0010010
dm3
GTGG-ATGCCAA-GA-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATAGTACGAGT-----AAAA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ACCATATAGAAGACAAAA-----AC--ACACA--CTTAACACACAATTACACGCATTTA-TCATC------AAAATCTT-----GCATAGAA-----A---A----------------------------------A-AAAAAATTGCAAA-------------AC-CAGTTGATTG---TCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droEre2
GTAG-ATGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATA-----------TTAATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCAGTTTTACAATGCAACC-TGTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ACCATATTCAAGACACAA-----AC--ACACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTA-----ACATATAA-----A----------------------------------------AAAAGATAGCAAA-------------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................A-------------------TATTAATG----CGAACTAGCGCA..........................................................................................................................................................................................................................................................................................................2112.0020010100
.............................................................................................................................................................................................................................................................GCAACC-TGTTTAGCG--TTTGGGGA......................................................................................................................................................................................................................................................................2312.0022000000
..........................................................................................................................................................................................................................................................AATGCAACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2812.0021000100
.............................................................................................................................................................................................................................................................GCAACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2512.0021100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCAAA-------------AA-CAGTTGATTG---T.2211.0010000100
..................................................................................................................................................................................................................................................................................................................ATCAAC-------------------------------------GGA-------ACCATATTCA............................................................................................................................................................................1911.0010001000
...G-ATGCCAA-GG-AACAATCAT-----CGT---AAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................CACAA-----AC--ACACA--CTTTACACACAA........................................................................................................................................2411.0011000000
..................................................................................................................................................................................................................................................................C-TGTTTAGCG--TTTGGGGAG.....................................................................................................................................................................................................................................................................1911.0010001000
...........................................................................................................A-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCA..........................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................TACAAAATCAAC-------------------------------------GGA-------ACCATAT...............................................................................................................................................................................2211.0011000000
.....................................................................................................................................................................................................................................................................GTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................1811.0010000100
................................................................................................................................................................................................................................................................................................................AAATCAAC-------------------------------------GGA-------ACCATATTCAAGACACA.....................................................................................................................................................................2811.0010000100
...................AATCAT-----CGT---AAAAGCACA---------------TA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......GCCAA-GG-AACAATCAT-----CGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------AAAAGATAGCAAA-------------AA-CAGTTG.........2211.0010000010
....................................................................................................................................................................................................................................................TTTTACAATGCAACC-TGTTTAGC.................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACACAATTACGCGCATTTA-T.........................................................................................................................2111.0010000100
..........................................................................................................................................................................................................................................ACTAGCGCAGTTTTACAATGC..............................................................................................................................................................................................................................................................................................2111.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................CTTTACACACAATTACGCGCATTTA-TCA.......................................................................................................................2811.0010000010
................AACAATCAT-----CGT---AAAAGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................................................................................................................AGCGCAGTTTTACAATGCAACC-TGT......................................................................................................................................................................................................................................................................................2511.0010100000
..........................................................................................................................................................................................................................................................................GCG--TTTGGGGAGCATTTGTAC............................................................................................................................................................................................................................................................2111.0011000000
GTAG-ATGCCAA-GG-AACAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................CTTTACACACAATTACGCGCATTT............................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................................................ATACAAAATCAAC-------------------------------------GGA-------ACC...................................................................................................................................................................................1911.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTTA-TCATC------AAAATC.........................................................................................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................TATACAAAATCAAC-------------------------------------GGA-------ACCATATTC.............................................................................................................................................................................2611.0011000000
............................................................................................................................................................................................................................................................................................................................................................................ATTCAAGACACAA-----AC--ACACA--CTTT................................................................................................................................................2411.0011000000
.............GG-AACAATCAT-----CGT---AAAAGCACA---------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACAAAAT.........................................................................................................................................................................................................................................1911.0011000000
droYak3
CTGG-ATGCCAA-GG-AACAATCAT-----CTT---AAAAGCACA---------------TA-CA-----------ATC---CCATTCATA-----------TTAATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGCGCACTTTTACAATGCAACC-TGTTTAGCG--TTTGGGGAGCATTTGTACCTTGT----TATACAAAATCAAC-------------------------------------GGA-------ATCATATTCAAGACACAATTCAAAC--AAACA--CTTTACACACAATTACGCGCATTTA-TCATC------AAAATCTT-----ACATAT-----ACA-----------------------------------------AAAAATAGCAAAAACAAA-------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................GCAACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2513.00300100020000
..................................................................................................................................................................................................................................................................C-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2013.00301000020000
............................................................................................................................................................................................................................................................TGCAACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2612.00201000010000
...........................................................................................................................................................................................................................................................ATGCAACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2712.00200100010000
.............................................................................................................................................................................................................................................................GCAACC-TGTTTAGCG--TTTGGGG.......................................................................................................................................................................................................................................................................2212.00201100000000
................................................................................................................................................................................................................................................................ACC-TGTTTAGCG--TTTGGGGAGCA...................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................TTAGCG--TTTGGGGAGCATTTGTACCT..........................................................................................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................TACGCGCATTTA-TCATC------AAAATCTT-----ACAT..............................................................................................2911.00100000010000
..........................................................................................................................................................................................................................................................AATGCAACC-TGTTTAGCG--TTTGGGGAG.....................................................................................................................................................................................................................................................................2711.00100000010000
......................................................................................................................................................................................................................................................TTACAATGCAACC-TGTTTAGCG--..............................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................ATACAAAATCAAC-------------------------------------GGA-------ATCATATTCA............................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................................................................................TATACAAAATCAAC-------------------------------------GGA-------ATCATA................................................................................................................................................................................2311.00100000010000
......................................................................................................TTAATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----C.....................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................................................................................................................................................................................................................................................................C-TGTTTAGCG--TTTGGGGAGCAT..................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................................................GTTTAGCG--TTTGGGGAGCATTTGT..............................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................................................................AACC-TGTTTAGCG--TTTGGGGAG.....................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................TGTTTAGCG--TTTGGGGAGCATT.................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................CAAC-------------------------------------GGA-------ATCATATTCAAGACACA.....................................................................................................................................................................2411.00101000000000
.............GG-AACAATCAT-----CTT---AAAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................ACC-TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................TGTTTAGCG--TTTGGGGAGC....................................................................................................................................................................................................................................................................1911.00100100000000
.....ATGCCAA-GG-AACAATCAT-----CTT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................AAAATCAAC-------------------------------------GGA-------ATCATATTCAA...........................................................................................................................................................................2311.00100000010000
...............................................................................................................................................................................................................................................................AACC-TGTTTAGCG--TTTGGGGAGCA...................................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................................................................................A---------TA-------------------TATTAATG----CGAACTAGCGCACT........................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................................................................................................................................................................................................................................................ATACAAAATCAAC-------------------------------------GGA-------ATC...................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................A--CTTTACACACAATTACGCGC................................................................................................................................2111.00100000100000
.......................................AGCACA---------------TA-CA-----------ATC---CCATTCATA-----------TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................ATTTGTACCTTGT----TATACA.............................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................AACC-TGTTTAGCG--TTTGGGG.......................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACA--CTTTACACACAATTACGCGC................................................................................................................................2311.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACACAATTACGCGCATTTA-TCATC------...............................................................................................................2511.00100000010000
........................................................................................................................................................................................................................................GAACTAGCGCACTTTTACAA.................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGA...................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................AATTCAAAC--AAACA--CTTTACACA...........................................................................................................................................2311.00101000000000
.....................................................................................................................................................................................................................................................................GTTTAGCG--TTTGGGGAGCATT.................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................AAATCAAC-------------------------------------GGA-------ATCATATT..............................................................................................................................................................................1911.00101000000000
............................................................................................................................................................................................................................................................................G--TTTGGGGAGCATTTGTACCTTGT----T..................................................................................................................................................................................................................................................2511.00101000000000
........................................................................................................AATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGC.............................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................G--TTTGGGGAGCATTTGTACCTTGT----...................................................................................................................................................................................................................................................2411.00100000010000
....................................AAAAGCACA---------------TA-CA-----------ATC---CCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................G--TTTGGGGAGCATTTGTACCTT.........................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................ATA-------------------------------------------------------------------------------CA---------TA-------------------TATTAATG----CGAACTAGC.............................................................................................................................................................................................................................................................................................................2411.00101000000000
droEug1
GTAG-ATGCCAA-GG-AACAATCAT-----CGG--AAAAAGCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------CA---------TA---CAT------------AAATAATTG----CGAACTAGAAAAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACAAAATTAAC-------------------------------------GGA-------TCG-------AAACACAA-----AC--TC--G-----C-----GAATTAGGCGCATTTA-TCATC------AAAATCTT-----ACATAC-------A----------------------------------------AAAACCTAGCAAA--------------A-CAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droBia1
GCAG-ATGCCAA-GG-AACAATCAC-----CGT---GAAAGCACA---------------TA-CA-----------ATC---CCCTTCATT------------TCATA-------------------------------------------------------------------------------CA---------AA-------------------TAATAATG----CGAACTAGTGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATTCAAATTCGAC-------------------------------------GGA-------ACCATATTCAAGAGACAT-----AC--ACAGT-----C-----AAATTCCGCGTATTTA-GCATC------AAAATCTT-----ACATAA-------A----------------------------------------GAAACCTAGCAAA-------------CA-CAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droTak1
GTGG-ACGCCAT-GG-AACAATCAT-----CGT---AAAATCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------CA---------TA-------------------TAATGATG----CGAACTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTCGGTGAGCATTTGTACCTTGT----TATTCAAATTCGACAGAAT--C-----------------------AGAATCGGA-------ATCAAATCCAAGACACAA-----AC--ACACA-----C-----AAATTACGCGCATTTA-TCATC------AAAATCTT-----ACATAC-------A----------------------------------------AACACCTAGCAAA-------------CA-CAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droEle1
GCGG-AGGCCAA-GG-AACAATCAT-----CGT---AATAGCACA---------------TA-CA-----------ATC---CCATACATT-----------TTCATA-------------------------------------------------------------------------------AA---------CA-------------------TATTGTTG----CGAAGTAGCGCAGTTTTACAATGCAACC-TTTTTTGCG--TTAGGTGAGCATTTGTACCTTGT----TATACAAATTCGAC-------------------------------------GGA-------ACCACACGCAAGACGCAA-----AAACACACA-----C-----GAATTACGCGCATTTA-TCATC------AAAATCTT-----ACAT----CGTATAAT-G----------------------------------G-AAAAACTAGCAAAA-GA---------AA-AAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droRho1
GCGG-ATGGCAA-GA-AACAATCAT-----CGT---AAAAGCACA---------------TT-CA-----------ATC---CCATACATT-----------TTC-CA-------------------------------------------------------------------------------ATAACATTATACA-------------------AATTATTG----TGAAGTAGCACACTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGCGCATTTGTACCTTGT----TAAACATATTCGAC-------------------------------------GGA-------ATCATAATCAAGACACAA-----AC--ACA-------C-----GAATTACGCGCATTTA-TCATC------AAAATCTT-----TCAT----CTTACAAA-A----------------------------------G-AAAACCTAGCAAA-------------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droFic1
GTGG-ATGCCAA-GG-AACAATCAT-----CGT---AAAAGCACA---------------TA-CA-----------ATC---CCATACATT------------TCACA-------------------------------------------------------------------------------TA---------TA-------------------TATT-ACG----CGAATTAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACAAATTCGAT-------------------------------------GGA-------ACTATATTCAAGACCCAG-----GC--ACACA-----C-----AAGTTACGCGCATTTA-TCATC------AAAATCGA-----ACAT----CATTCTAA-A----------------------------------G-AGAACTTAGCAAA-------------AA-CAGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droKik1
GTGTAATGCCAA-GG-AACAATCAT-----CAG--AAAGAGTACCCACA-----------CA-CA-----------ATCTACGCATACTTA-----------CTCATG----------------------------------------------------------------------------AAACA---------TT-------------------AAATAGTG----CGAACTAGCGCAGTTTTACAATGCAGCC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATACGAGTCCGGC-------------------------------------AGA-------AGCAAATTCACGACAAAA-----AGAAACATA--CTTC-----AGATTATGCGCATTTA-TCATT------AAA-TCCTGCT--AAAT----TATACAA--A----------------------------------G-CAAAAGTAGTGAA--------------A-CGGTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
droAna3
GCGG-AGGCCAAAAG-AACAATCAT-----ATT---A----CACCTATACACACATCCCC--CAAACACACAGCCCCGACACAC-----------ATACATACCTA----------------------------------------------------------------------------------------------AACCAACAAAAAACCGTTACATTTTTG----CGAAATAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATAAAAGTCCAAC-------------------------------------GGA-------ACCAAATTCAAGACACAA-----TT------G-----A-----AGATTACTCGCATTTA-TCATC------AAAATCTG-TCACCCAT----TG----AAAGGCA---------------------------------AAAAGTTAGCGAAAAGGAAAAAAT-A--CCATTTGATTG---TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................AACC-TTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2314.004130000
..................................................................................................................................................................................................................................................................................................................................................................................GACACAA-----TT------G-----A-----AGATTACTCGCA...............................................................................................................................2312.002000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCA---------------------------------AAAAGTTAGCGAAAA.............................2211.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAT----TG----AAAGGCA---------------------------------AA..........................................1811.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCTG-TCACCCAT----TG----AAAGGCA---------------------------------AAAA........................................2911.001010000
...........................................................................................................................................................................................................................................................................................................ATAAAAGTCCAAC-------------------------------------GGA-------ACCA..................................................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTAGCGAAAAGGAAA........................1811.001001000
...........................................................................................................................................................................................................................CATTTTTG----CGAAATAGCGCAGT........................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTCGCATTTA-TCATC------AAAATCT........................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAT-A--CCATTTGATTG---TC2011.001010000
......................................................................................................................................................................................................................................................................TTTAGCG--TTTGGTGAGCATTT................................................................................................................................................................................................................................................................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTTAGCGAAAAGGAA.........................1911.001000010
................................................................................................................................................................................................................................................................................TTGGTGAGCATTTGTACCTTGT----...................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAT----TG----AAAGGCA---------------------------------AAAAGT......................................2211.001000010
........................................................................................................................................................................................................................................................................TAGCG--TTTGGTGAGCATTT................................................................................................................................................................................................................................................................1911.001000010
.........................................................................................................................................................................................................................TACATTTTTG----CGAAATAGCGCAGTT.......................................................................................................................................................................................................................................................................................................2511.001010000
..............................................ATACACACATCCCC--CAAACACACAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................................................................................TGCAACC-TTTTTAGCG--TTTGGT........................................................................................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATAAAAGTCC........................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................AGTTTTACAATGCAACC-TT.......................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................TTTTAGCG--TTTGGTGAGCATTTGTACC...........................................................................................................................................................................................................................................................2711.001000010
...............................................................................................................................................................................................................AAAAAACCGTTACATTTTTG----CGAA..................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................................................................................................................TTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAAAAAT-A--CCATTTGATTG---T.2511.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-TCACCCAT----TG----AAAGGC..............................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................C------AAAATCTG-TCACCCAT----TG----AAAGGCA---------------------------------............................................2611.001100000
....................................A----CACCTATACACACATCCCC--C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
GCGG-AGGCCAAAAG-AACAATCAT-----CAT---AATA---CA------CACCCCCCC-C-CAAC-----------ACACAC-----------ATATATATTTA----------------------------------------------------------------------------------------------AAGCAACAAAAATCCGATACATTTTTG----CGAAATAGCGCAGTTTTACAATGCAACC-TTTTTAGCG--TTTGGTGAGCATTTGTACCTTGT----TATGAAAGTCCAAC-------------------------------------GGA-------ACCAAATTCAAGACACAT-----TT------G-----A-----GGATTACTCGCATTTA-TCATC------AAAATCTG-TCATCCAT----TG----AAAGGCA---------------------------------AAAAGTTAGCTAAAAGGAAAAAATAA--CCATTTGATTG---TCSizeHit CountTotal NormTotal
No Reads
dp5
GTGG-ATACTGA-GGATACAATCATACAATCAT---A--AATACA---------------TA-GA-----------ATC---CCACACATA---CGAGTATATTCACA-------------------------------------------------------------------------------TA---------CA-------------------CAATACTG----CGATCTAGCGCAATTTTACAATGCAACCGTTTTTAGCG--TTTGGTGAGCATCTGTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGCATAA---------------------------TTTACGCGCATTTA-TCATCCAATTCAAAATCGT-----TCAT----TATACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTTAATTA---TCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-C...............................................................................................................................................................................................2912.0020110000000
..................................................................................................................................................................................................................................................................CGTTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2112.0020110000000
...............................................................................................................................................................................................................................................................................................................................G-----------------------AAAAC-CGA-------TCCATATTCCAGGC........................................................................................................................................................................2312.0020110000000
.........................................................................................................................................................................................................................................................................AGCG--TTTGGTGAGCATCTG...............................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................CGAATA-GAT-------G-----------------------AAAAC-CGA-------T.....................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................CGTTTTTAGCG--TTTGGTGAGCAT..................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................AGCG--TTTGGTGAGCATCTGTAC............................................................................................................................................................................................................................................................2211.0010000001000
...............................................................................................................................................................................................................................................................................................................GAATA-GAT-------G-----------------------AAAAC-CGA-------TCCAT.................................................................................................................................................................................2211.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTT..........2611.0010010000000
............................ATCAT---A--AATACA---------------TA-GA-----------ATC---CCACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-................................................................................................................................................................................................2811.0010100000000
..............................................................................................................................................................................................................................................................................................TACCTTGT----TATACGAATA-GA......................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................ATACGAATA-GAT-------G-----------------------AAAAC-C...............................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTA-TCATCCAATTCAAAATCGT-----TCAT----..........................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................AACCGTTTTTAGCG--TTTGG.........................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----TCAT----TATACAAA-A----------------------------------GGGA..........................................1911.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................TACGCGCATTTA-TCATCCAAT.................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................ATGCAACCGTTTTTAGCG--T.............................................................................................................................................................................................................................................................................1911.0010010000000
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACGAATA-........................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-.............2511.0010010000000
GTGG-ATACTGA-GGATACAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................AATACTG----CGATCTAGCGCAAT........................................................................................................................................................................................................................................................................................................2111.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTTAATT......2511.0010100000000
.............................................................................................................................................................................................................................................................GCAACCGTTTTTAGCG--TTTG..........................................................................................................................................................................................................................................................................2011.0010000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTT..........2311.0010000001000
.....................................................................................................................................................................................................................................................................TTTTAGCG--TTTGGTGAGCATC.................................................................................................................................................................................................................................................................2111.0010000010000
........................................ATACA---------------TA-GA-----------ATC---CCACACATA---CGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................GAT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGC........................................................................................................................................................................2611.0010010000000
...................................................................................................................................................................................................................................................................GTTTTTAGCG--TTTGGTGAGCATCT................................................................................................................................................................................................................................................................2411.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAATTCAAAATCGT-----T.................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................ACGAATA-GAT-------G-----------------------AAAAC-CGA-------TCCATA................................................................................................................................................................................2511.0010000000010
......................................................................................................................................................................................................................................................................TTTAGCG--TTTGGTGAGCATCTGTA.............................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACGAATA-GA......................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................CACA-------------------------------------------------------------------------------TA---------CA-------------------CAATACTG----CGATCT................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................T-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGC........................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................AT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGC........................................................................................................................................................................2511.0010010000000
......TACTGA-GGATACAATCATAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...................................................................................................................................................................................................................................................................GTTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2011.0010100000000
.....ATACTGA-GGATACAATCATACAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----TATACAAA-A----------------------------------GGGAAATCTAGC..................................2311.0010000001000
droPer2
GTGG-ATACTGA-GGATACAATCATACAATCAT---A--AATACA---------------TA-GA-----------ATC---CCACACATA---CGAGTATATTCACA-------------------------------------------------------------------------------TA---------CA-------------------CAATACTG----CGATCTAGCGCAATTTTACAATGCAACCGTTTTTAGCG--TTTGGTGAGCATCTGTACCTTGT----TATACGAATA-GAT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGCATAA---------------------------TTTACGCGCATTTA-TCATCCAATTCAAAATCGT-----TCAT----TATACAAA-A----------------------------------GGGAAATCTAGCAAA--------------A-C-GTTAATTA---TCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAATTCAAAATCGT-----..................................................................................................1813.003300000
............................................A---------------TA-GA-----------ATC---CCACACATA---CGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
..................................................................................................................................................................................................................................................................CGTTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2112.002200000
................................................................................................................................................................................................................................................................................TTGGTGAGCATCTGTACC...........................................................................................................................................................................................................................................................1812.002200000
........................................................................................................................................................................................................................................................................TAGCG--TTTGGTGAGCATCTGTACCTTGT----...................................................................................................................................................................................................................................................2811.001000001
..........................................................................................................................................................................................................................................................AATGCAACCGTTTTTAGCG--T.............................................................................................................................................................................................................................................................................2011.001001000
.............................................................................................................................................................................................................................................................................................GTACCTTGT----TATACGAATA-GA......................................................................................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................................TAGCG--TTTGGTGAGCATCT................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................GTTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2011.001000001
................................................................................................................................................................................................................................................................................TTGGTGAGCATCTGTACCTT.........................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................AT-------G-----------------------AAAAC-CGA-------TCCATATTCCAGGC........................................................................................................................................................................2511.001001000
...............................................................................................................................................................................................................................................................AACCGTTTTTAGCG--TTTGGTGAGC....................................................................................................................................................................................................................................................................2411.001001000
.......................................................................................................................................................................................................................................................................TTAGCG--TTTGGTGAGCATCTG...............................................................................................................................................................................................................................................................2111.001010000
droWil2
GTTG-ATACCAA-GGATACAATCAT-----ATTTATATAAACACCCACACACATACTCCT--CAGAG-------------------ACACAC-----T----TAA-TATTC---ACCCACACACACACACAC--CATACCGCACACACACACACACACACACACACAT-TCAAGCATACACATAAAAGA----------A-------------------CAATTTGT----CGATTTAGCGCAGTTTTACAATGCAACCATTTTTAGCGTGTTTGGTGAGCATTTGTACCTTGT----TATACGAATTATAG-----ATA-----------------------TATAC-CAACTCTCCTATCATATTC--------------------------------------------------------------A-AATTGT-----GCCCAAAA---------AGAAAAAGATCCACAAATTTCATAGCTAAACAAAAAAGAA----AG--AA-------------AT-CAATTAATTG---TCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................ATTTAGCGCAGTTTTACAATG...............................................................................................................................................................................................................................................................................................2112.00200020
.............................................................................................................................................................................................................................................................GCAACCATTTTTAGCGTGTTTG..........................................................................................................................................................................................................................................................................2212.00200020
...............................................................................................................................................................................................................................................................AACCATTTTTAGCGTGTTTGGT........................................................................................................................................................................................................................................................................2212.00200110
.....................................................................................................................................................................................................................................................................TTTTAGCGTGTTTGGTGAGC....................................................................................................................................................................................................................................................................2012.00200110
..............................................................................................................................................................................................................................................................................GTTTGGTGAGCATTTGTACCTT.........................................................................................................................................................................................................................................................2212.00200020
.........................................................................................................................................................................................................................................ATTTAGCGCAGTTTTACAAT................................................................................................................................................................................................................................................................................................2011.00100010
..............................................ACACACATACTCCT--CAGAG-------------------ACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................................................................CATTTTTAGCGTGTTTGGTGAGC....................................................................................................................................................................................................................................................................2311.00100100
...................................................................................................................................................................................................................................................................................................................TATAG-----ATA-----------------------TATAC-CAACTCTCCT......................................................................................................................................................................................2311.00110000
..............................................................................................................................................................................................................................................................................GTTTGGTGAGCATTTGTAC............................................................................................................................................................................................................................................................1911.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCCACAAATTTCATAGCT......................................................2211.00100010
.................................................................................................................................................................................................................................................................CCATTTTTAGCGTGTTTGGTG.......................................................................................................................................................................................................................................................................2111.00100001
..........................................ACCCACACACATACTCCT--CAGAG-------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...................................................................................................................................................................................................................................................................ATTTTTAGCGTGTTTGGTGAGC....................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAAAAAGAA----AG--AA-------------AT-CAATTAAT.......2711.00100010
....................................................................................................................................................................................................................................................................TTTTTAGCGTGTTTGGTGAGC....................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................CATAAAAGA----------A-------------------CAATTTGT----CGAT..................................................................................................................................................................................................................................................................................................................2211.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTAAACAAAAAAGA..........................................1811.00100010
...........................................................................................................................................................................................GA----------A-------------------CAATTTGT----CGATTTAGC.............................................................................................................................................................................................................................................................................................................2011.00100010
..................................................................................................................................................................................................................................................................CATTTTTAGCGTGTTTGGT........................................................................................................................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................................................................................................GTTTGGTGAGCATTTGTACCTTGT----T..................................................................................................................................................................................................................................................2511.00100010
............................................CCACACACATACTCCT--CAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................................TTAGCGTGTTTGGTGAGC....................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................................................................................................................................TAGCGCAGTTTTACAATGC..............................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................ATACACATAAAAGA----------A-------------------CAATTTGT----......................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................................................................AT-TCAAGCATACACATAAAAGA----------A-------------------CA................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................................................................................................................................................................................................................................................................................................................A-----------------------TATAC-CAACTCTCCTATCATATTC--------------------------------------------------------------A-AAT..........................................................................................................2911.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCATAGCTAAACAAAAAAGA..........................................2411.00100010
.................................................................................................................................................................................ACACATAAAAGA----------A-------------------CAATTTGT----......................................................................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................CGATTTAGCGCAGTTTTACAAT................................................................................................................................................................................................................................................................................................2211.00100100
..........................................................................................................................................................................................AGA----------A-------------------CAATTTGT----CGATTTAGC.............................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................TACAATGCAACCATTTTTAGCGT...............................................................................................................................................................................................................................................................................2311.00100100
..........................................................................................................................ACACACACAC--CATACCGCACAC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----GCCCAAAA---------AGAAAAAGATCCAC...................................................................2411.00100010
.......................................................................................................................................................................................................A-------------------CAATTTGT----CGATTTAGC.............................................................................................................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA----AG--AA-------------AT-CAATTAAT.......1811.00100010
...................................................................................................................................C--CATACCGCACACACACACA....................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
droVir3
GCAA-ATTCAAA-TCTTACA----------------TTAGGCACA---------------TC-AA-----------ATC---ATATGCACAC-----------TC------------CATACACACACACACACATACACAAACACCAACATACACACACACACA----------------------CA---------TC-------------------TATCTATATGGAAAATCTATCGCAGTTTGACAATGCGGCC-ATTTTAGTG--TTTGGCCCGCATTCGTTCATTGT----TGTTTGGCTAAAATAAG--AAA----------------------------AATA-------CCTACATTCAGGATGAAT-----AC--AAGGACATCT---------GTTTTCGGATTGA-TTATT-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------ATTACTTAGCAAT-------------AC-CCGTTTATTATGATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................ATTTTAGTG--TTTGGCCCGC....................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000200000000000000000000000000000
.......................................................................................................................................TACACAAACACCAACATACACACACA............................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ATTCGTTCATTGT----TGTTTGGCT..........................................................................................................................................................................................................................................2212.002000200000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCGCATTCGTTCATTGT----TG.................................................................................................................................................................................................................................................1912.002001000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................C-ATTTTAGTG--TTTGGCCCGC....................................................................................................................................................................................................................................................................2012.002001000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CAGGATGAAT-----AC--AAGGAC.....................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................ATCTATATGGAAAATCTATC.............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................A-----------ATC---ATATGCACAC-----------TC------------CATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CAGGATGAAT-----AC--AAGGACAT...................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AA----------------------------AATA-------CCTACATTCAGGATG.......................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGGATGAAT-----AC--AAGGACAT...................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----GCGTTAAA-----A----------------------------------------ATTACTTAGCA.................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CA---------TC-------------------TATCTATATGGAAAATC.................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTATCGCAGTTTGACAATGCGGC...........................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GACATCT---------GTTTTCGGATTGA-TT........................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TAAG--AAA----------------------------AATA-------CCTACATTCAGGATGAA.....................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATTGT----TGTTTGGCTAAAAT.....................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TTATT-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------A...........................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ACACACACACA----------------------CA---------TC-------------------TATCTATATGGA......................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CACAAACACCAACATACACA................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGGATGAAT-----AC--AAGGAC.....................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTAGTG--TTTGGCCCGCATT.................................................................................................................................................................................................................................................................1911.001000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................CACACACATACACAAACACCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGGATTGA-TTATT-----AAAAAGCTC-----GC................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................ATCTATATGGAAAATCTATCGCA..........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................ATTCAGGATGAAT-----AC--AAGGACATCT---------GTTTTCGGAT..............................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTATT-----AAAAAGCTC-----GCGT..............................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................ATTCGTTCATTGT----TGTTTGGCTAAA.......................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATTGA-TTATT-----AAAAAGCTC-----GC................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................CTATATGGAAAATCTATCGCAGTT.......................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TATT-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------A...........................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AC--AAGGACATCT---------GTTTTC..................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AAATCTATCGCAGTTTGACAATGCGGC...........................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AGGACATCT---------GTTTTCGGATT.............................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCTACATTCAGGATGAAT-----AC--AA.........................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGGATGAAT-----AC--AAGGACATC..................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CACACACATACACAAACACCAACA......................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGGATGAAT-----AC--AAGGA......................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................AACATACACACACACACA----------------------CA---------TC-------------------TATC..............................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................GCACAC-----------TC------------CATACACACACACACACATAC...................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GAAAATCTATCGCAGTTTGACAATGCGGC...........................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGATTGA-TTATT-----AAAAAGCTC-----..................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TTATT-----AAAAAGCTC-----GCGTTA............................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TTATT-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------AT..........................................2711.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................T---------GTTTTCGGATTGA-TTATT-----AAAAAGCT........................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................ATA-------CCTACATTCAGGATG.......................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................T-----AAAAAGCTC-----GCGTTAAA-----A----------------------------------------............................................1911.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATCTATCGCAGTTTGACAATGC..............................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GA-TTATT-----AAAAAGCTC-----GCGTT.............................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CT---------GTTTTCGGATTGA-TTA.......................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................C--AAGGACATCT---------GTTTTCGGATTGA-T.........................................................................................................................2511.001000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GACAATGCGGCC-ATTTTAGTG--TTT...........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................TACACACACACACACATACAC.................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CACACACACATACACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCAA-CTACAAA-AACTACAATCGT-----CAC---ATACAATCA--TACACGCGCACTC-CCGAGAAAACAAACCATCTGCAC---------------------ATA-------------------------------------------------------------------------------CA---------GG---CAC-------------CAAAACTG--AGAGACGTAGCGCCGTTTGACAATGCAACC-ATTTTAGCG--TTCGGTACGCATTTGTTCTTTGT----TAATTGGATTCATA-----CAAAAAGCCAACATTCATGATGGATGAAGTA-TAA-----------------------------------------TCT---------ATTTCCGGAATGG-TGATT-----GCTAAACTT-----ACGTTATT-----A----------------------------------------AATACTTAGGAAAA------------CCAC-ATTTATTATAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................AGCCAACATTCATGATGGATGAAGT..................................................................................................................................................................................................2512.002000002
....................................................................................................................................................................................................................................................................ATTTTAGCG--TTCGGTACGC....................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................GACGTAGCGCCGTTTGAC...................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................................................A-TAA-----------------------------------------TCT---------ATTTCCGGAATGG-..........................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCGGAATGG-TGATT-----................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................................................TTCATA-----CAAAAAGCCAACATTCATGATG..........................................................................................................................................................................................................2811.001100000
................................................................................................................................................................................................................................................................ACC-ATTTTAGCG--TTCGGTACGC....................................................................................................................................................................................................................................................................2211.001100000
..................................................ACGCGCACTC-CCGAGAAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................................................................................................................................................................................................................................................................................................................................ATGATGGATGAAGTA-TAA-----------------------------------------....................................................................................................................................................1811.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATGG-TGATT-----GCTAAACTT-----AC................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................ACATTCATGATGGATGAAGT..................................................................................................................................................................................................2011.001001000
.........................................................................................................................................................................................................................................................................................................................................ATTCATGATGGATGAAGTA-TAA-----------------------------------------T...................................................................................................................................................2311.001000001
........................................................................................................................................................................................................................................................................................CATTTGTTCTTTGT----TAATTGGATTCATA-----C...............................................................................................................................................................................................................................2911.001100000
..............................................................................................................................................................................................................................AACTG--AGAGACGTAGCGCCGTTTG.....................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................ATGCAACC-ATTTTAGCG--TTCGGTAC......................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................T---------ATTTCCGGAATGG-TGATT-----GCT.............................................................................................................2211.001100000
.........................................................................................................ATA-------------------------------------------------------------------------------CA---------GG---CAC-------------CAAAACTG--AGA.....................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................GAAAACAAACCATCTGCAC---------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................AGCG--TTCGGTACGCATTTGTTCTTT.........................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----ACGTTATT-----A----------------------------------------AATACTTAGG..................................2111.001100000
droGri2
GCAA-ATATTAA-T-----AATCGC-----TAT---AGTTACACA---------------CA-CA-----------ATC---ATATGCACT-----------TAT-TAATTAAAATCCATACACACAGAAACAGAAAAACACACACCCACACACACTATCACACACAGAACAAACACAC------------------------------------------TCATCA---CAAACTTAGCGCAGTTTAACAATGCAGCC-ATTTTAGGG--TTTGGCATGCATTTGGACTTTCTTTATTTTTT------GTT-----CAAAACGA-------------------------AA-------ATTTTGTTGATG---AAT-----CC--ATGGATGTGT---------GTACCCGGAATTAAGAATT-----AAAAAAAAT-----GCAT----TATATAA---------------------------------------AATACTTAGAAAA-------------CC-ACGTTTATTATAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................TTTGTTGATG---AAT-----CC--ATGG.......................................................................................................................................................1911.00110
.......................................................................................................................................................................................................................................................................................................................................................................................AT-----CC--ATGGATGTGT---------GTACCCG.................................................................................................................................2111.00110
....................................................................................................................CCATACACACAGAAACAGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................AAAATCCATACACACAGAAACAGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................TGT---------GTACCCGGAATTAAGAATT-----AAA.............................................................................................................2511.00101
......................................................................................................................................................ACACACTATCACACACAGAAC..................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................................................................................................................................................ACTATCACACACAGAACAAACACA...........................................................................................................................................................................................................................................................................................................................................................................2411.00110
.................................................................................................................................................................................................................................................................CC-ATTTTAGGG--TTTGGCATG.....................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 04:34 PM