ID:

dsi_7706

 Coordinate:

2r:6584440-6584589 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.8 -44.2 -44.2

Flybase annnotation

exon [2r_6584121_6584439_-]; CDS [2r_6584121_6584439_-]; intron [2r_6584440_6585219_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGATGTTGCTGTCCGCGCGTAAATGGTTTTGTAATGTTAATGCTGCAGGGGAGCGGAGGAGGGAGCAGGACAAGATTTGCATTTACATAATTTAGCACAACAATGCGTCAAGTGGCCCGAGAGAGAAGATCCTCGGGCAATTATCACGTCACTCGTTGGACTTCGCTTTCAAATCTGTCCGTTCATTTTCGCATTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
**************************************************...(((((((...((((.(((((.((((((..............(((....(((((.((...((((((((((.((.....)))))))))......)))...)).)))))......)))..))))))))))))))).))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
..................................................................................................................................................................................................ATCGAGAAGGAGAACAAGAACGGC................................ 24 3 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGCGTGATGTCGCCGGACT................ 19 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................AGGAGGGAGCAGGACAAGATTTGCATTT..................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTGATGTCGCCGGACTCGCCCGAAGCC..... 27 0 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................TGATGTCGCCGGACTCGCCCGAAG....... 24 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................AGGAGAACAAGAACGGCGTGA............................ 21 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TTATGTCGCCGGACTCGCCCGAAGCCGA... 28 1 1 1.00 1 0 0 0 0 1 0 0
............................................TGCAGGGGAGCGGAGGAGGGAGCAG..................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................GCCGGACTCGCCCGAAGCC..... 19 0 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................TGATGTCGCCGGACTCGCCC........... 20 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................................................................................................................................................................AGAACGGCGTGATGTCGCCGGACT................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................AATGTTAATGCTGCAGGGGA..................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................................................................................................................CGAGAAGGAGAACAAGAACGGC................................ 22 2 3 0.67 2 0 0 2 0 0 0 0
.......................................................................................................................................................ACTCGGTGGACTTCGCGTT................................................................................ 19 2 2 0.50 1 0 1 0 0 0 0 0
...........................................................GAGGGAGCAGGACATGTTT............................................................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 1
.............................................................................................................................GCTGATCCTTGGGCAATTAT......................................................................................................... 20 3 12 0.17 2 0 2 0 0 0 0 0
................................................................................................................GTGGTTCGAGAGAGAACAT....................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 1
.......................................................................................................................................................................................................CAAGGAGAACAAGAACTG................................. 18 2 16 0.06 1 0 0 0 0 1 0 0
...........................................................................................................................................................................................................GAGGACAAGAACGGCGTTT............................ 19 3 20 0.05 1 0 1 0 0 0 0 0
.....................................................................................................................................................TGACTAGTTGGACTTCCC................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

GGCTACAACGACAGGCGCGCATTTACCAAAACATTACAATTACGACGTCCCCTCGCCTCCTCCCTCGTCCTGTTCTAAACGTAAATGTATTAAATCGTGTTGTTACGCAGTTCACCGGGCTCTCTCTTCTAGGAGCCCGTTAATAGTGCAGTGAGCAACCTGAAGCGAAAGTTTAGACAGGCAAGTAAAAGCGTAACGTCTTCCTCTTGTTCTTGCCGCACTACAGCGGCCTGAGCGGGCTTCGGCTTTG
**************************************************...(((((((...((((.(((((.((((((..............(((....(((((.((...((((((((((.((.....)))))))))......)))...)).)))))......)))..))))))))))))))).))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M053
female body
...........................................................................................................................................................................................................................ACTACAGCAGCCTGAGCGGG........... 20 1 1 1.00 1 1 0 0 0
....................................................................................................................................................................GGGCAAGTTTAGTCAGGCAA.................................................................. 20 3 4 0.25 1 0 0 1 0
.........................................................................................................................................................AGCAAGCTGAAGCTAGAGTTT............................................................................ 21 3 5 0.20 1 0 1 0 0
..........................................................................................................................................................................................................CCTCTAGGTCTTGCAGCACT............................ 20 3 9 0.11 1 0 0 0 1
...............................................................................................................................................................................................................................GGGCGGCCGGAGCGGGCTT........ 19 3 12 0.08 1 0 1 0 0
......................................................ACCGCCTCCCTCGTCCT................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................AGTAACGTCTTACTCT........................................... 16 2 20 0.05 1 0 1 0 0
................................................ACCATCGCCTCCTCCCT......................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6584390-6584639 - dsi_7706 CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGC---CCGAGAGA--GAAGAT---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTTCGCTTTCAAATCTGTCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
droSec2 scaffold_1:3417741-3417990 - CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGC---CCGAGAGA--GAAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGGCACT---------CGTTG----GATTTTGCTTTCAAATTTGTCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTTCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
dm3 chr2R:5807203-5807455 - TCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTTAAGTGGTGGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTGCGCTTTCAAATTTGCCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
droEre2 scaffold_4929:8561181-8561431 + CCG--TTGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G-----CTGCGGAGGAG---AGA-TCAGGACGAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGAA---ACGGGAG----TAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GATTTCGATTTCAAATATCGCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CTTTGCAGAAGGAGAACAAGAACGGCGTTATGTCGCCGGACTCGCCCGAAGCCGAAAC
droYak3 2L:18433290-18433545 - CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGA---GG-A------------------------------------A--------CGGAGGAG---AGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGA---AGGGGAGG--GTAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACCTCACT---------CGTTG----GACTTCGATTTCAAGTTTCCCCGTTCA-----------------------------------------------TTTTGGCTTTC-------------------G---------CTTTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
droEug1 scf7180000409209:368930-369191 + TCG--CTGCCGCTGTCCG-----------GG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCTGC-GGGG-A------------------------------------A--------C----------AGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAA--------------------CGTCAAGTGGC---CCGAAAG----AAAAG---------------------------------CCT------------------------GGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CCTCG----GATTTCTACC-TTACTCTCTT-----A----TTTCTCTTACAAAATTTTGT-------GT----------TAA-TTTT------C-------------------G---------CTTTGCAGAAAGAGAACAAGAACGGCGTTATGTCGCCGGACTCACCTGAAGCTGAAAC
droBia1 scf7180000301506:898822-899044 + TTT--------CCGTCGG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCCGG-GGGG-A------------------------------------G--------CGG----------A-GCAGGACAAGATGG-GGATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAGGG----GAGGG---------------------------------CCT------------------------GGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACTTCGCC----CG-------------GCTGACAGATTT-----------------------------TTGT-----------------------------------------------------G---------TCTTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCTGAAGCCGAAAC
droTak1 scf7180000415870:458986-459235 + -------GTCGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATATGCTGCAGA---GGGA------------------------------------A--------CGCAGG---------GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAAAG----GAAAG---------------------------------CCT------------------------TGG-GCAATTAT-------------------------------------------------------------------------------------------CGCGTCATT---------CGTCGTTGGGACGTCCGTCTCTAACA-------------------------G--------GTTTTCGGC----------TCG-TTCT------C-------------------GC-------CCTTTGTAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
droEle1 scf7180000491107:1285977-1286235 + T------GTCGCTGTCCG-----------CG-----GGTAAATGGTTTTGTAATGTTAATAC--TGCCGG---GGAA------------------------------------A--CAGCAGCGAAGCAGCAG---CGTAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAAAGAAGGAAAAG---------------------------------CCT------------------------GGG-CCAATTAA-------------------------------------------------------------------------------------------CACGTCACT---------CGTCG----CAC---GCTTTTGAATATTTCCCTTGA-----------------------------------------------TTTTCCCTTCC-------------------G---------ACTTGCAGAAAGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCGGAAGCCGAAAC
droRho1 scf7180000768901:51450-51707 - -------GTTGCTGTCCG-----------CG-----TGCAAATGGTTTTGTAATGTTAATGC--TGCAGA---GGAA------------------------------------A--------CAGAGCGGCGG---CGTGGGACAATATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGG---CCGAAAG----AAAGG---------------------------------CCT------------------------GGGGCCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGGCG----GATATCTCTTACACATTTCCCC--TCA------------------TTTTGCATTTT--------------TAC-ATTT------C-------------------G---------CCTCACAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAAC
droFic1 scf7180000453858:933804-934048 + -----------------------------CG-----CGCAAATGGTTCTGTAATGGTAATGC--TGCAGGCGGGG-A------------------------------------T--------CGGATG---------GCAGGACGCGATGG-GCATTTGCATAATTCAGCACAACAGAG--------------------CGCGAAGTGGT---CCGAAAG----GAG-----------------------------------------------------------------------TAGGATAAG---------------------------------------------GAGAA--------GGAGGGGCAGGAGGAGGAGGAGGACTCCACGTCACT---------GGGCG-----ACTTTTCTCACGACTCTCCC-----------------------------------------------------TTT-------------------------------------GCCCGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAGGCCGAAAC
droKik1 scf7180000302476:2780446-2780715 - -----------------------------CG-----CGTAAATGGTGTTGTAATGTTAATTC--CGCCGA---GTGAGCGAGCGGGGTAAGGAGGCAGGAATTGAGGCAGGGAACCCAGAAGGGGAGTAGCGG---CATAGGACAGGATTT-GCATTTACATAATTTAGCGGAACAAAG--------------------CGTCAATTCAG---CCGAAAG----GAAGG---------------------------------CCT------------------------TGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CACCC----GGTCTCTCCTCC----------TTC-----------------------------------------------------------C-------------------GC-CCTCTCTTGAAACAGAAGGAGAACAAGAACGGCGTCATGTCGCCGGACTCACCTGAAGCCGAAAC
droAna3 scaffold_13266:15314938-15315171 - TTG--AGGTTGCCGCC-A-----------CA-----TCGAAGTGGTTTTGTAATGTAAATGT--TGCGA-------------------------------------------------------------------CGTACGCCACGATTTCGGATTTACATAATTTAGCAAAACAAAGCGGAGAA---------------------------------T----AGAAT---------------------------------CCC------------------------CCG-GCAATTAC-------------------------------------------------------------------------------------------CACCTCACT---------G-TCG-----CTTTCCCCTCT----TTTCACGC-------------CTGT------TTGTGTTTCCGCC----------T--ATTTC------C-------------------C--------CCCAAACAGAAGGAGAACAAGAACGGTGTTATGTCGCCGGACTCGCCCGAGGCGGAGAC
droBip1 scf7180000396547:1733708-1733929 + GTGGGTAGTTGCTGGT-A-----------CA-----TCCAAATGGTTTTGTGATGTAAATGT--TGCGA-------------------------------------------------------------------CGTACGCCACGATTTTGGATTTACATAATTTAGCAAAACAAAGGGAAGAA---------------CCGGGT------------------GCCC---------------------------------CCT------------------------CCG-GCAATTAC-------------------------------------------------------------------------------------------CACCTCACT---------GA---------CGCCTAT--------------------------------------TTGTGTTTCCATC----------C--CCTTC------C-------------------C--------CCAATACAGAAGGAGAACAAGAACGGTGTTATGTCGCCGGACTCGCCCGAGGCGGAGAC
dp5 3:10966836-10966910 + TCT--CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGT---------------------------------------------------------------------------------C-TCTTTCTGAAAACAGAAGGAGAACAAGAACGGCGTCATGTCCCCGGACTCGCCCGAGGCCGAGAC
droPer2 scaffold_4:6288495-6288547 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAGGAGAACAAGAACGGCGTCATGTCCCCGGACTCGCCCGAGGCCGAGAC
droWil2 scf2_1100000004514:902202-902508 + CTC--TCTTTGTTTGCCG----------CCGCTTGCCGTAAATTGTTTTGTAATGTTAATGC--TGCG--------------------------------------------------------------------CGTA-GACAAGA-------TTTACATAATTTAGCAGATGAACGG--AGAAGCAAGCGACAACGTGTCAAGTGTC-----GGTTCT--GCCC--TCCTTCCCCTCCCCCG-------------CCAGGCACCAATTTACTCTACTCCTGCTGCAGGG-CCAATTAT---------------------------------------------------------T---------------------------------TAC--TACT-CACCCACTTACT-----------------AAATATTTTCTTTGCCCTCT-------GT------TTCTCTCTCTTTC----------T--TTTTC------T-------------------A---------CTCTGCAGAAGGAGAACAAAAACGGAGTCATGTCACCGGATTCGCCTGAAGCTGAGGC
droVir3 scaffold_12875:20480126-20480467 - dvi_8148 TTG--CTGTTGCTGTCTTTTGTTTGCTGCCT-----TTTAAATTGTTTTGTAATGTTAATGC--CGCCGT-GCAG-A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAACAGA---------GCGGCGACGTGTCAAGTGCC-----AAGTGC--GCAC--GCCGCCCTCGCCCCTGTCCCAGCCCCTGCCCAGGCA------------------------CGG-CCAATTACGAGTACTTGTCCCCTCCCCCCCCCCTTGCCACGCCCCTGCACACATCATACAC-AATTTCCCACACA------CAAA-----------------CTCACT---------CTCTT----TCTTTCTCTTTC----------------------------------------------TC----------T-------G----------------------GTTGTC-------ATTTGCAGAAGGAGAACAAAAACGGCGTCATGTCACCGGATTCACCCGAAGCGGAGGC
droMoj3 scaffold_6496:5655719-5656048 + TTG--TTGTTGTTGTCTTTTGTTTGCTGCCT-----TTTAAATTGTTTTGTAATGTTAATGC--CGCGC----AG-A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAACGAA---------GCGGCGACGTGTCAAGTGCC-----AAGTG------CAC---------------------------------CCC-CACCCTAGTCTCACTCTGTCG--CAG-CCAATTACCACTAC---------------------------------------------ACAAATTTCTCTCACACACGCATAAA-----------------CACACT-----CACTCACCC----ACTCTCTCCCTC----------T-----CTCT-------TT------C----------TCTCCCTCTTTCT--TGGTC------TGTTTTGTGTGTGTGCCGTTGTC-------ATTTGCAGAAGGAGAACAAAAACGGCGTCATGTCACCGGATTCACCCGAAGCGGAGGC
droGri2 scaffold_15245:11069003-11069098 + TTG--TTGTTGCTGTCTT-TGTTTGGTGTCT-----TTTAAATTGTTTTGTAATGTTAATGCCATGCAG-------A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGC---CCGAGAGA--GAAGAT---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTTCGCTTTCAAATCTGTCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGATGTCGCCGGACT................1911.00101000000000000000
.............................................................................................................................AGGAG---GGA-GCAGGACAAGATTT-GCATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTCGCCGGACTCGCCCGAAGCC.....2711.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTCGCCGGACTCGCCCGAAG.......2411.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACAAGAACGGCGTGA............................2111.00100000000000001000
................................................................TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGACTCGCCCGAAGCC.....1911.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTCGCCGGACTCGCCC...........2011.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGTGATGTCGCCGGACT................2411.00100100000000000000
...................................................AATGTTAATGC--TGCAGG---GG-A------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
droSec2
CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGC---CCGAGAGA--GAAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGGCACT---------CGTTG----GATTTTGCTTTCAAATTTGTCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTTCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................ATTTAGCACAACAATG--------------------CGTCAAGTG...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
................................................................TGCAGG---GG-A------------------------------------G--------CGGAGGAG---GGA-GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCAAATTTGTCCGTT...................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAACGGCGTGATGT.........................1911.0010100
dm3
TCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTTAAGTGGTGGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTGCGCTTTCAAATTTGCCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAACAAGAACGGCGTGATG..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTCGCCGGACTCGCCC...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GTGGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------C.............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTGCGC....................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAG..................................................1912.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................GCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACGGCGTGATGTCGC......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CGG-GCAA......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCGCCGGACTCGCCCGAAGCCGA...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................GATTT-GCATTTACATAATTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTG----GACTGCGCTTTCAAATTTGCCCGT....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................GGAGGTG---GGA-GCAGGACAAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................AGG---GG-A------------------------------------G--------CGGAGGTG---GGA-C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CAGG---GG-A------------------------------------G--------CGGAGGTG---GG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCGCCGGACTCGCCCGA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCCGGACTCGCCCGAAGCCGA...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CACGTCACT---------CGTTG----GACTG.......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGATGTCGCCGGACTC...............2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GA..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CG............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CATTGCAGAAGGAGAACA........................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AAAG--------------------CGTTAAGTGGTGGG..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................GTGGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CGG-..........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAACGGCGTGATGT.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCAGAAGGAGAACAAGAACGG.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................AATGTTAATGC--TGCAGG---GG-A------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCCGGACTCGCCC...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTG.....................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAATTTGCCCGTTCA-----------------------------------------------TT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GACTGCG.....................................................................................................................................................................2611.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAACGGCGTGATGTCGCC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................GAGA--GGAGAG---------------------------------CCT------------------------CGG-GC........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------C-------------------G---------CATTGCAGAAGGAGAACAAGA.....................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GGAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACG...................................................................................................................................................................................................2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GGGCCGAGAGA--GGAGAG---------------------------------CCT------------------------CGG-..........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAAGGAGAACAAGAACGGCG...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GTTAAGTGGTGGGCCGAGAGA--G...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................GAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACG...................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACAAGAACGGCGTGATGTCGCC.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................GCACAACAAAG--------------------CGTTAAGTGGTGG...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGAACGGCGTGATGTCGC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTCGCCGGACTCGCCCGA.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GTAAATGGTTTTGTAATGTTAATGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................C--TGCAGG---GG-A------------------------------------G--------CGGAGGTG---GGA-GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACTCGCCCGAAGCCGAAAC2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GA..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA-----------------------------------------------TTTT------C-------------------G---------CATTGCAG..................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCG--TTGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGG---GG-A------------------------------------G-----CTGCGGAGGAG---AGA-TCAGGACGAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGAA---ACGGGAG----TAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGTTG----GATTTCGATTTCAAATATCGCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CTTTGCAGAAGGAGAACAAGAACGGCGTTATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCGGACTCGCCCGAAGCCGAAAC2712.0020000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCGGACTCGCCCGAAGCC.....2211.0011000000
...........................................................................................................................................................................................................................G----TAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACGT..................................................................................................................................................................................................2511.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCGTTCA-----------------------------------------------TTTT------C-------------------G---------CTTTGCAG..................................................2411.0010000010
...............................................................................................................................................................................................................GAA---ACGGGAG----TAGAG---------------------------------CCT------------------------CGG-..........................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
CCG--ATGTTGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCAGA---GG-A------------------------------------A--------CGGAGGAG---AGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAATG--------------------CGTCAAGTGGA---AGGGGAGG--GTAGAG---------------------------------CCT------------------------CGG-GCAATTAT-------------------------------------------------------------------------------------------CACCTCACT---------CGTTG----GACTTCGATTTCAAGTTTCCCCGTTCA-----------------------------------------------TTTTGGCTTTC-------------------G---------CTTTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAACGGCGTGATGTCGCCGGACT................2713.00330000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGAACGGCGTGATGT.........................2011.00100000010000
................................................................................................................................................................................................................GA---AGGGGAGG--GTAGAG---------------------------------CCT------------------------CGG-GC........................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCTCACT---------CGTTG----GACTTCGA....................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTTCAAGTTTCCCCGTT...................................................................................................................................................2211.00100100000000
................................................................TGCAGA---GG-A------------------------------------A--------CGGAGGAG---AGA-GCAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGTGATGTCGCCGGACTC...............2211.00101000000000
droEug1
TCG--CTGCCGCTGTCCG-----------GG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCTGC-GGGG-A------------------------------------A--------C----------AGA-GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAA--------------------CGTCAAGTGGC---CCGAAAG----AAAAG---------------------------------CCT------------------------GGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CCTCG----GATTTCTACC-TTACTCTCTT-----A----TTTCTCTTACAAAATTTTGT-------GT----------TAA-TTTT------C-------------------G---------CTTTGCAGAAAGAGAACAAGAACGGCGTTATGTCGCCGGACTCACCTGAAGCTGAAACSizeHit CountTotal NormTotal
No Reads
droBia1
TTT--------CCGTCGG-----------CG-----CGTAAATGGTTTTGTAATGTTAATGC--TGCCGG-GGGG-A------------------------------------G--------CGG----------A-GCAGGACAAGATGG-GGATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAGGG----GAGGG---------------------------------CCT------------------------GGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACTTCGCC----CG-------------GCTGACAGATTT-----------------------------TTGT-----------------------------------------------------G---------TCTTGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCTGAAGCCGAAACSizeHit CountTotal NormTotal
No Reads
droTak1
-------GTCGCTGTCCG-----------CG-----CGTAAATGGTTTTGTAATGTTAATATGCTGCAGA---GGGA------------------------------------A--------CGCAGG---------GCAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAAAG----GAAAG---------------------------------CCT------------------------TGG-GCAATTAT-------------------------------------------------------------------------------------------CGCGTCATT---------CGTCGTTGGGACGTCCGTCTCTAACA-------------------------G--------GTTTTCGGC----------TCG-TTCT------C-------------------GC-------CCTTTGTAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotal
No Reads
droEle1
T------GTCGCTGTCCG-----------CG-----GGTAAATGGTTTTGTAATGTTAATAC--TGCCGG---GGAA------------------------------------A--CAGCAGCGAAGCAGCAG---CGTAGGACAAGATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGC---CCGAAAGAAGGAAAAG---------------------------------CCT------------------------GGG-CCAATTAA-------------------------------------------------------------------------------------------CACGTCACT---------CGTCG----CAC---GCTTTTGAATATTTCCCTTGA-----------------------------------------------TTTTCCCTTCC-------------------G---------ACTTGCAGAAAGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCGGAAGCCGAAACSizeHit CountTotal NormTotal
No Reads
droRho1
-------GTTGCTGTCCG-----------CG-----TGCAAATGGTTTTGTAATGTTAATGC--TGCAGA---GGAA------------------------------------A--------CAGAGCGGCGG---CGTGGGACAATATTT-GCATTTACATAATTTAGCACAACAAAG--------------------CGTCAAGTGGG---CCGAAAG----AAAGG---------------------------------CCT------------------------GGGGCCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CGGCG----GATATCTCTTACACATTTCCCC--TCA------------------TTTTGCATTTT--------------TAC-ATTT------C-------------------G---------CCTCACAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAAGCCGAAACSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------CG-----CGCAAATGGTTCTGTAATGGTAATGC--TGCAGGCGGGG-A------------------------------------T--------CGGATG---------GCAGGACGCGATGG-GCATTTGCATAATTCAGCACAACAGAG--------------------CGCGAAGTGGT---CCGAAAG----GAG-----------------------------------------------------------------------TAGGATAAG---------------------------------------------GAGAA--------GGAGGGGCAGGAGGAGGAGGAGGACTCCACGTCACT---------GGGCG-----ACTTTTCTCACGACTCTCCC-----------------------------------------------------TTT-------------------------------------GCCCGCAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACTCGCCCGAGGCCGAAACSizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------CG-----CGTAAATGGTGTTGTAATGTTAATTC--CGCCGA---GTGAGCGAGCGGGGTAAGGAGGCAGGAATTGAGGCAGGGAACCCAGAAGGGGAGTAGCGG---CATAGGACAGGATTT-GCATTTACATAATTTAGCGGAACAAAG--------------------CGTCAATTCAG---CCGAAAG----GAAGG---------------------------------CCT------------------------TGG-GCAATTAT-------------------------------------------------------------------------------------------CACGTCACT---------CACCC----GGTCTCTCCTCC----------TTC-----------------------------------------------------------C-------------------GC-CCTCTCTTGAAACAGAAGGAGAACAAGAACGGCGTCATGTCGCCGGACTCACCTGAAGCCGAAACSizeHit CountTotal NormTotal
No Reads
droAna3
TTG--AGGTTGCCGCC-A-----------CA-----TCGAAGTGGTTTTGTAATGTAAATGT--TGCGA-------------------------------------------------------------------CGTACGCCACGATTTCGGATTTACATAATTTAGCAAAACAAAGCGGAGAA---------------------------------T----AGAAT---------------------------------CCC------------------------CCG-GCAATTAC-------------------------------------------------------------------------------------------CACCTCACT---------G-TCG-----CTTTCCCCTCT----TTTCACGC-------------CTGT------TTGTGTTTCCGCC----------T--ATTTC------C-------------------C--------CCCAAACAGAAGGAGAACAAGAACGGTGTTATGTCGCCGGACTCGCCCGAGGCGGAGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGTCGCCGGACTCGCCCGAGG.......2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACGGTGTTATGTCGCCGGACTC...............2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTATGTCGCCGGACC................1920.501010000
droBip1
GTGGGTAGTTGCTGGT-A-----------CA-----TCCAAATGGTTTTGTGATGTAAATGT--TGCGA-------------------------------------------------------------------CGTACGCCACGATTTTGGATTTACATAATTTAGCAAAACAAAGGGAAGAA---------------CCGGGT------------------GCCC---------------------------------CCT------------------------CCG-GCAATTAC-------------------------------------------------------------------------------------------CACCTCACT---------GA---------CGCCTAT--------------------------------------TTGTGTTTCCATC----------C--CCTTC------C-------------------C--------CCAATACAGAAGGAGAACAAGAACGGTGTTATGTCGCCGGACTCGCCCGAGGCGGAGACSizeHit CountTotal NormTotal
No Reads
dp5
TCT--CT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGT---------------------------------------------------------------------------------C-TCTTTCTGAAAACAGAAGGAGAACAAGAACGGCGTCATGTCCCCGGACTCGCCCGAGGCCGAGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCCCGGACTCGCCCG..........1811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTCATGTCCCCGGACTCGCC............2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTCATGTCCCCGGACTCGCCCG..........2511.0010100000000
droPer2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAGGAGAACAAGAACGGCGTCATGTCCCCGGACTCGCCCGAGGCCGAGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGAACGGCGTCATGTCCCCGGACT................2912.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACGGCGTCATGTCCCCGGACT................2512.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAACAAGAACGGCGTC.............................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACAAGAACGGCGTCAT...........................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGGCGTCATGTCCCCGG...................2011.001010000
droWil2
CTC--TCTTTGTTTGCCG----------CCGCTTGCCGTAAATTGTTTTGTAATGTTAATGC--TGCG--------------------------------------------------------------------CGTA-GACAAGA-------TTTACATAATTTAGCAGATGAACGG--AGAAGCAAGCGACAACGTGTCAAGTGTC-----GGTTCT--GCCC--TCCTTCCCCTCCCCCG-------------CCAGGCACCAATTTACTCTACTCCTGCTGCAGGG-CCAATTAT---------------------------------------------------------T---------------------------------TAC--TACT-CACCCACTTACT-----------------AAATATTTTCTTTGCCCTCT-------GT------TTCTCTCTCTTTC----------T--TTTTC------T-------------------A---------CTCTGCAGAAGGAGAACAAAAACGGAGTCATGTCACCGGATTCGCCTGAAGCTGAGGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC----------T--TTTTC------T-------------------A---------CTCTGCAG..................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCGGATTCGCCTGAAGCTGA...2411.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------T--TTTTC------T-------------------A---------CTCTGCAGAA................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTCACCGGATTCGCC............2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGGATTCGCCTGAAGCTGA...2211.00110000
.............................................................................................................................................................................................AGCGACAACGTGTCAAGTGTC-----G.......................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
droVir3
TTG--CTGTTGCTGTCTTTTGTTTGCTGCCT-----TTTAAATTGTTTTGTAATGTTAATGC--CGCCGT-GCAG-A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAACAGA---------GCGGCGACGTGTCAAGTGCC-----AAGTGC--GCAC--GCCGCCCTCGCCCCTGTCCCAGCCCCTGCCCAGGCA------------------------CGG-CCAATTACGAGTACTTGTCCCCTCCCCCCCCCCTTGCCACGCCCCTGCACACATCATACAC-AATTTCCCACACA------CAAA-----------------CTCACT---------CTCTT----TCTTTCTCTTTC----------------------------------------------TC----------T-------G----------------------GTTGTC-------ATTTGCAGAAGGAGAACAAAAACGGCGTCATGTCACCGGATTCACCCGAAGCGGAGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGTCATGTCACCGGATTCACC............2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACGGCGTCATGTCACCGGATTCA..............2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CCCCCCCCTTGCCACGCCCCTGC..........................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTG--TTGTTGTTGTCTTTTGTTTGCTGCCT-----TTTAAATTGTTTTGTAATGTTAATGC--CGCGC----AG-A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAACGAA---------GCGGCGACGTGTCAAGTGCC-----AAGTG------CAC---------------------------------CCC-CACCCTAGTCTCACTCTGTCG--CAG-CCAATTACCACTAC---------------------------------------------ACAAATTTCTCTCACACACGCATAAA-----------------CACACT-----CACTCACCC----ACTCTCTCCCTC----------T-----CTCT-------TT------C----------TCTCCCTCTTTCT--TGGTC------TGTTTTGTGTGTGTGCCGTTGTC-------ATTTGCAGAAGGAGAACAAAAACGGCGTCATGTCACCGGATTCACCCGAAGCGGAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAACGGCGTCATGTCACCGGATT................2711.001000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGCCGTTGTC-------ATTT......................................................1920.501000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCCGTTGTC-------ATTTG.....................................................1820.501010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGCCGTTGTC-------ATTTG.....................................................2020.501010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGCCGTTGTC-------ATTTG.....................................................2220.501010000
droGri2
TTG--TTGTTGCTGTCTT-TGTTTGGTGTCT-----TTTAAATTGTTTTGTAATGTTAATGCCATGCAG-------A------------------------------------G----------------------CGTA-GACAAGA-------TTTACATAATTTAGCACATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:21 AM