ID:

dsi_7596

 Coordinate:

3l:15443923-15444073 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.9 -4.9

Flybase annnotation

exon [3l_15444074_15444292_-]; CDS [3l_15444074_15444292_-]; exon [3l_15443185_15443922_-]; CDS [3l_15443185_15443922_-]; intron [3l_15443923_15444073_-]

No Repeatable elements found

mature
star
  1. 2l:16339359-16339373 -
  2. 2r:7256286-7256300 -
  3. 2r:21541979-21541993 +
  4. 3l:11151187-11151201 -
  5. dsi_7596  3l:15443997-15444011 -
  6. 3l:17986202-17986216 +
  7. 3r:3185751-3185765 +
  8. 3r:6495350-6495364 +
  9. x:13025954-13025968 -
  10. x:15025202-15025216 -
  11. node_27832:6405-6419 -

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGGGCAAGATCAATGAGAACGAAGATCCAGCTCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTGAAAATATTGTGCACAATGAGTGCATTTAGTGTGGTTTTAAAAAGAAAAAAAAGTGAAATAGAAATAGAAATACTGTAAATGGATTATTGACAAACAAATTTATTAATCTCCGTTGATTTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGA
****************************************************************************************************************.............................((((((.......((((((..(((((.(((....))).))))).))))))...)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
....................................................................................................................................................................................................................GACCGGGTTCGATATCACGGAC................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGGACCTAATCGATGCC..... 18 0 1 2.00 2 0 0 2 0 0 0 0 0
..........CAATGAGAACGAAGA.................................................................................................................................................................................................................................. 15 0 2 2.00 4 0 4 0 0 0 0 0 0
......AGATCAATGAGAACGAAGATCCAGCTC.......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................TTCGATATCACGGACCTAATC........... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................TCTCCGTTGATTTTTTAG.................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................TCCAGCTCATTATGCAACGAGAGAGGT....................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................CGGACCTAATCGATGCC..... 17 0 1 1.00 1 0 0 0 0 1 0 0 0
.................................ATTGTGCAACGAGAGA.......................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................................................................TTAGTGTGATTTTAAAAAAAAA............................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................TGAGTGCATTTTGTATGGTTGT........................................................................................................................................ 22 3 4 0.75 3 0 0 0 0 0 0 3 0
...............................................................................................................................................................................TTTATTAATCTCCGT............................................................. 15 0 2 0.50 1 0 0 0 0 0 1 0 0
.................AACGATCATCGAGCTCATTG...................................................................................................................................................................................................................... 20 3 12 0.42 5 0 0 0 0 0 0 0 5
...............................................................................................................................................................................................................GAGTAGACCGGGCTCGA........................... 17 2 3 0.33 1 0 0 0 0 0 0 0 1
.............................................................................................TGAGTGCATTTTGAGTGGTGTT........................................................................................................................................ 22 3 4 0.25 1 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................ACGGACATAAACGATGCC..... 18 2 5 0.20 1 0 0 1 0 0 0 0 0
.............................................................................................TGAGTGCACTTTGTATGGTTTT........................................................................................................................................ 22 3 5 0.20 1 0 0 0 0 0 0 1 0
.......................................................................................................TAGAGTGGATTTAAAAAGA................................................................................................................................. 19 2 7 0.14 1 0 1 0 0 0 0 0 0
..........CAATGAGAACGAAGAA................................................................................................................................................................................................................................. 16 1 9 0.11 1 0 1 0 0 0 0 0 0
................................................................................................................TTTAAAAAGAAAAAA............................................................................................................................ 15 0 11 0.09 1 0 0 0 0 0 1 0 0
.............................................................................................TGAGTGCATTTTGTATGGTG.......................................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1 0
.GGGCAAGATCAATTGGA......................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCCCGTTCTAGTTACTCTTGCTTCTAGGTCGAGTAACACGTTGCTCTCTCCGTTCAGCCCTTATATAACCTTAAGACTTTTATAACACGTGTTACTCACGTAAATCACACCAAAATTTTTCTTTTTTTTCACTTTATCTTTATCTTTATGACATTTACCTAATAACTGTTTGTTTAAATAATTAGAGGCAACTAAAAAATCCAAATACTCCTCTGGCCCAAGCTATAGTGCCTGGATTAGCTACGGTTGCT
**************************************************.............................((((((.......((((((..(((((.(((....))).))))).))))))...)))))).**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
..............................................................................................................................................................................................................ACTCCTCAGGCCCTAGCTA.......................... 19 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................TAATAACTGTTAGCTTAAATTAT..................................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0
..................................ACCACGATGCTCTCTCC........................................................................................................................................................................................................ 17 2 4 0.50 2 2 0 0 0 0 0 0
...............................................................................................TCACGTTAATCACCACAAAAT....................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................TTAGAGCCAACTAAAGAA.................................................... 18 2 9 0.22 2 0 0 2 0 0 0 0
.........................................................................AGGTTTTTATAACACGTGT............................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................................CCTAAGCTATAGTGGCTG................. 18 2 5 0.20 1 0 0 0 1 0 0 0
....................................................................................AGACGAGTTACTCACGTAA.................................................................................................................................................... 19 2 6 0.17 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AAACACTCCTCTGGC.................................. 15 1 7 0.14 1 1 0 0 0 0 0 0
......................................................................................................................................................................................TAGAGCCAACTAAAGAA.................................................... 17 2 20 0.10 2 1 0 1 0 0 0 0
........................................................................................................................................................................................GAAGAAACTAGAAAATCCAAA.............................................. 21 3 13 0.08 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................TTAGAGCCAACTAAATAA.................................................... 18 2 13 0.08 1 0 0 0 0 0 1 0
.............................................................................................................................................................................TTAAATCCTTAGAGCCAACT.......................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0
...............................................................................................................ACATTATTTCTTTTTTTTCACTT..................................................................................................................... 23 3 14 0.07 1 1 0 0 0 0 0 0
..................................ACCACGTCGCTCTCTCC........................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0
........................................................GCCCTTGTACCACCTTAAG................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1
.........AGTTCCTCTTGCTTC................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:15443873-15444123 - dsi_7596 AGGGCAAGATCAATGAGAACGAAGATCCAGCTCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTGAA-AATAT---TGTGCAC--------------------------------AATGAGTGCATTTA-------------------------------------------------------------------------------------------------------------------------------GTGT-----------------------------------------------------G-------------GTTTTA------------------------AAAAG--AAAAAAAAGTGAAAT------AGAAATAGAAATACTGTAAATGGATTATTGAC------AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGA
droSec2 scaffold_0:7923988-7924249 - AGGGCAAGATCAATGAGAACGAAGATCCAGCTCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTGAA-AATATTATTGTGCAC--------------------------------AATGAATGCATTCA-------------------------------------------------------------------------------------------------------------------------------GTGT-----------------------------------------------------G-------------GTTTTA------------------------AAAAGAAAAAAAAAAGTGAAATCGAAATAGAAATAGAAATACTGTAAATGGATTATCGAC------AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATTACGGACCTAATCGATGCAAACGA
dm3 chr3L:15815859-15816112 - AGGGCAAGATCAATGAGAACGAAGACCCAGCCCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTAAAAAATATTATTGTGAAA--------------------------------AATGAATGCATTCA-------------------------------------------------------------------------------------------------------------------------------ATGT-----------------------------------------------------G-------------GTGTTA------------------------AAAAA--AAAAAGAAGTGAAAT------GG------AATTACTTTACATGGTTTATGGACTTTGA-AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGA
droEre2 scaffold_4784:18069055-18069369 - AGGGCAAGATCAACGAAAACGAGGACCCAGCCCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTAGAATTCCGAA-AATATTATTGTGT---------------------------------------------------------------------------------------------------------------------------------------------GCCTATAAATGGGGCAGAAATAG---------------TTAACGCATTATTGAA-AAGTTAA---------------------CTAAATGCGATTACTCTTATAAGTTTTAAGAAAGAAATT-C-GATAGTGTTTA---------AAAAAGTGGTAT------AA------AATTATTAATAATGGATTATTGGCTTTGA-AAATAGTGTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GCT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATTACGGACCTCATCGATGCCAACGA
droYak3 v2_chr3L_random_100:5679-5973 - AGGGCAAGATCAACGAGAACGAGGACCCAGCCCATTGTGCAACAAGAGAGGCAAGTCGGGAACAAATTAGAATTCCGAA-AATATTATTGTGT---------------------------------------------------------------------------------------------------------------------------------------------GCCTATAAATGGGGCAGAAATGG---------------TGAACTCATTTTTAAACAAATTGA---------------------TGAAATGAGATTACTTTTATATTCTTTAAGAAATCAATTTCTTTTAGTGCCTA---------AATA-----------------------------------TAATTATTGACATTGA-AAATAGTTTTATTAATCTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GCT--CTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTCATCGATGCCAACGA
droEug1 scf7180000408844:565603-565788 - AGGGAAAGATCAACGAGAACGAGGATCCAGCTCATTGCGCCACGAGAGAGGCAAGTCGGGAAAAA--------------------------------------------------------------AATGATTGCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACT-----ATTTATTATAGTAAGGATTAATA-------------ATGCTTT---------------------AACTG-----------------------------------------------A---------------------------AC------TTCT-TG-GCT--GTTGCAGGTTTATGAAGAGACCGGGTTTGATATCACGGACACCATTGATGCCAACGA
droBia1 scf7180000302334:559655-559973 + AGGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGCGCCACGAGAGAGGCAAGTCGGGAACACTC------------------------------------------------------------AATGACCACA-------------------------AATTATAAACCAGTTATTGTTACTTATTATTTTATCCTAAAATCCATTGTTAA-------------------TACCATGAACGGAACAGTCATGTTCTTAATTTTCGTGTCGCACTTAATTTATTCAAAATTGAGATATTTAGTATTTATAATTCAGAAATGTG----------------------------------------------------------------------------------------------ACCATTTTATTCGA-A-------------------------------------------------------------------------------------------AAT----------------------------AGCATT------------------------------------GATTCCAATTC--TT-GCC--CTTGCAGGTTTATGAGGAAACCGGGTTCGACATCACGGACATCATCGATGCCAACGA
droTak1 scf7180000415815:56306-56423 - ---GTAAGATAG-----AAACAGGAAG-------------------------GAGCTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAA-----------------TCAAATTC-----AATTA-----------------------------------------------A---------------------------CT------TTCTTGC-TCT--CTTGCAGGTTTACGAGGAAACCGGGTTTGACATTACGGACATTATTGATGCCAACGA
droEle1 scf7180000491000:1258185-1258242 - AGGGCAAGATCAATGAGAACGAGGATCCAGCCCATTGTGCCACGAGAGAGGCAAGTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770870:18351-18698 + AGGGCAAGATTAACGAGAATGAGGATCCAGCACATTGTGCCACGAGAGAGGCAAGTCGTGGAT-------------------------TGTGCATGAATTAATTTGACCTGCAACTTTGCTAAATATAATGTTTGCATTCTTTATTAACCCCTATCGACTCAAATTTTTTATCTGT---------------------------------------GTTAGGATTATCTTTTTTAACCT----ATGGGC--------------------TTGT-----------------------------------------------------G-------------GGTTAA------------------------A---GATTAAGATTACTTAGACTTAATCAGATTTTGAATT------------------------------------------TGCTG-------------------------CCAGAA----------------------------------------AACAGAGTTGAATGTATCTTATAATCTTAT-----------------------------------TTTTCTGT--TCTCCATTT--TG-GCG--CCTGCAGGTTTATGAGGAGACCGGGTTCGACATCACGGATCTCATTGATGCCAACGA
droFic1 scf7180000454065:1491414-1491552 + TTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAGGATGGGTATATTTTATAAGAATATC---------------AATCGAATGTGAACATG--TTTTCTGA--TCATTATTT--GA-ACT--CCTGCAGGTTTATGAGGAGACCGGGTTCGACATCACGGACACCATCGATGCCAACGA
droKik1 scf7180000302686:928472-928633 + AGGGCAAGATAAATGAGAACGAGGATCCGGCACACTGTGCTACAAGAGAGGTGAGTCAGAAATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-TAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------AACTA---AT----------------------------TGTATTTAATAAAAA---------------------------A-------TTC-GTTGGCT--TACACAGGTTTATGAGGAGACCGGGTTCGATATTACGGACAACATCGATGCCAATGA
droAna3 scaffold_13337:11337195-11337352 + AAGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGTGCCACCAGAGAGGTAAGCTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTT-------------------------CCAGAAAC------------------TCATTCAAATACTAATAG-----------------------------------------------T---------------------------TA------TAA-T---TCT--CTTTCAGGTTTATGAGGAGACCGGCTTCGACATCACGGACATCATTGACGCCAACGA
droBip1 scf7180000396569:69768-69924 - AAGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGTGCCACAAGAGAGGTAAGCTGTAACCTTCCTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CCAAGTACATCCTAAGCC-----------------------------------------------A---------------------------TA------T----AC-ATA--CTTGCAGGTTTATGAAGAGACCGGGTTCGACATCACAGACATCATTGACGCCAACGA
dp5 XR_group6:3579892-3580046 - AGGGGAAAATCAATGAGAACGAGGATCCAGCACATTGTGCAACAAGAGAGGTGAGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATAAACATGGCATTTT---------------------AATTG-----------------------------------------------A---------------------------TT------TCT-C---TTC--TTTTTAGGTTTACGAGGAAACTGGGTTCGACATCACCGACATCATCGATGCCAATGA
droPer2 scaffold_9:1875724-1875878 - AGGGGAAAATCAATGAGAACGAGGATCCAGCACATTGTGCAACAAGAGAGGTGAGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATAAACATGGCATTTT---------------------AATTG-----------------------------------------------A---------------------------TT------TCT-C---TTC--TTTTTAGGTTTACGAGGAAACTGGGTTCGACATCACCGACATCATCGATGCCAATGA
droWil2 scf2_1100000004540:1474894-1475071 + dwi_1433 AGGGTAAAATTAACGAGAACGAGGATCCAGCCCATTGTGCCACCAGAGAGGTACATACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA----------------------------------------------------------------------------------------------------------GAAAAAAAACAAGATATTCT---------------------A-----------------------------------------------------TTCTATTCTTAATTTC--CCATTTGTT--TTTTGTTT-----TTTTCTGATTAGGTTTATGAGGAGACTGGTTTCGATATAACCGATATTATCGATGCCAACGA
droVir3 scaffold_13049:22224561-22224646 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------AACTGAAAAT----------------------------TGTATT------------------------------------TA------TCC-A---TTT--GCTTTAGGTCTATGAGGAGACGGGCTTTGACATAACGGACATCATAGATGCAGATGA
droMoj3 scaffold_6680:16832360-16832534 + AGGGCAAAATCAATGAGCACGAGAATCCCGAACACTGTGCCACCAGGGAGGTGAGTAAAAATATAC---AAATTATATA-TATAT---TTTAT-----------------------------------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAT------TAAAAATAACAT---T---CCCTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GTT--GCCTTAGGTATATGAGGAGACGGGCTTTGACATAACGAACATCATAGATGCTGATGA
droGri2 scaffold_15110:21315448-21315642 - AGGGTAAAATCAACGAAAACGAGGATCCCGCACACTGTGCCACCAGGGAGGCAAGTAACAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGAAAAGAGAATTTTTAGCTAATATCAAATTG----------------------------------------------------------CTTCAAATTGCAAAATGGTCTAATCGTT--TTATAT----TT-ATT--GCTGTAGGTCTATGAGGAGACAGGCTTTGACATAACAAACGCCATTGATGCGGATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGGGCAAGATCAATGAGAACGAAGATCCAGCTCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTGAA-AATAT---TGTGCAC--------------------------------AATGAGTGCATTTA-------------------------------------------------------------------------------------------------------------------------------GTGT-----------------------------------------------------G-------------GTTTTA------------------------AAAAG--AAAAAAAAGTGAAAT------AGAAATAGAAATACTGTAAATGGATTATTGAC------AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGGTTCGATATCACGGAC.................2213.00300300000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGACCTAATCGATGCC.....1812.00220000000000000000
..........CAATGAGAACGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1522.00400000000040000000
......AGATCAATGAGAACGAAGATCCAGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATATCACGGACCTAATC...........2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GAT--TTTTTAG..................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACCTAATCGATGCC.....1711.00100000010000000000
.................................ATTGTGCAACGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------T................................................................1520.50100000000001000000
..........CAATGAGAACGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1690.11100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................TTTA------------------------AAAAG--AAAAAA........................................................................................................................................................................................................................................................................................................15110.09100000000001000000
droSec2
AGGGCAAGATCAATGAGAACGAAGATCCAGCTCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTGAA-AATATTATTGTGCAC--------------------------------AATGAATGCATTCA-------------------------------------------------------------------------------------------------------------------------------GTGT-----------------------------------------------------G-------------GTTTTA------------------------AAAAGAAAAAAAAAAGTGAAATCGAAATAGAAATAGAAATACTGTAAATGGATTATCGAC------AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------TT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATTACGGACCTAATCGATGCAAACGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................AGATCCAGCTCATTGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
........ATCAATGAGAACGAAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.0020020
................................CATTGTGCAACGAGAGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
........................ATCCAGCTCATTGTGCAACGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAATCGATGCAAACGA1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGGACCTAATCGATGCA.....2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGGACCTAATCGAT........1811.0010010
dm3
AGGGCAAGATCAATGAGAACGAAGACCCAGCCCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTGGAATTCTAAAAAATATTATTGTGAAA--------------------------------AATGAATGCATTCA-------------------------------------------------------------------------------------------------------------------------------ATGT-----------------------------------------------------G-------------GTGTTA------------------------AAAAA--AAAAAGAAGTGAAAT------GG------AATTACTTTACATGGTTTATGGACTTTGA-AAACAAATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTAATCGATGCCAACGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAGACCGGGTTCGATATC.......................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000003401000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCAATGAGAACGAAGACCCAGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000200000
.......................GACCCAGCCCATTGTGCAACGAGAGAGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCCAGCCCATTGTGCAACGAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000001000000000
.............TGAGAACGAAGACCCAGCCCATTGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
.....AAGATCAATGAGAACGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAAGATCAATGAGAACGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAGACCGGGTTCGATT.........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...................CGAAGACCCAGCCCATTGTGCAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCAATGAGAACGAAGACCCAGCCCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........AATGAGAACGAAGACCCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGGGCAAGATCAATGAGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................GACCCAGCCCATTGTGCAACGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGAGGAGACCGGGTTCGATA.........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGACCGGGTTCGATATCACGGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGCAAGATCAATGAGAACGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACGGACCTAATCGATGC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGACCCAGCCCATTGTGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCCATTGTGCAACGAGAGAGGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCGGGTTCGATATCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGTGAAAT------GG------AATTACTTTACATGG..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCACGGACCTAATCGATG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCAATGAGAACGAAGACCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................AGACCCAGCCCATTGTGCAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGCCCATTGTGCAACGAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGATCAATGAGAACGAAGACCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCACGGACCTAATCGATGCCAAC..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATTGTGCAACGAGAGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATATCACGGACCTAATCGATGC......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTA...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATATTGGAATTCTAAAAAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCCAGCCCATTGTGCAACGAGAGAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCGGGTTCGATATCACGG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACGAAGACCCAGCCCATTGTGCAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACTTTGA-AAACAAA............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCCAGCCCATTGTGCAACGAGAGAGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........TCAATGAGAACGAAGACCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGGAGACCGGGTTCGATATCACGGAC.................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACGGACCTAATCGATG.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATATCACGGACCTAATCGATGCCA....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCCAGCCCATTGTGCAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GCAAGTCGGGAATATATTGGAATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCCAGCCCATTGTGCAACGAGAGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................GACCCAGCCCATTGTGCAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCAATGAGAACGAAGACCCAGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCGGGTTCGATATCACGGA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCCAGCCCATTGTGCAACGAGAGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGGAGACCGGGTTCGATATCACG....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GAT--TTTTTAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGACCGGGTTCGATATCACG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGGTTCGATATCACGGAC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATCACGGACCTAATCGAT........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCACGGACCTAATCGATG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................CCCAGCCCATTGTGCAACGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGACCTAATCGATGCCAAC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAGACCGGGTTCGAT..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAGCCCATTGTGCAACGAGAGAGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGACCGGGTTCGATATC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGAGGAGACCGGGTTCG............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................GACCCAGCCCATTGTGCAACGAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATCAATGAGAACGAAGACCCAGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................AGCCCATTGTGCAACGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGCAAGATCAATGAGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAGAACGAAGACCCAGCCCATTGTGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACGGACCTAATCGATGCCAACG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCACGGACCTAATCGATGC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGGAGACCGGGTTCGATATCAT.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAAGATCAATGAGAACGAAGACCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------G................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGGGCAAGATCAACGAAAACGAGGACCCAGCCCATTGTGCAACGAGAGAGGCAAGTCGGGAATATATTAGAATTCCGAA-AATATTATTGTGT---------------------------------------------------------------------------------------------------------------------------------------------GCCTATAAATGGGGCAGAAATAG---------------TTAACGCATTATTGAA-AAGTTAA---------------------CTAAATGCGATTACTCTTATAAGTTTTAAGAAAGAAATT-C-GATAGTGTTTA---------AAAAAGTGGTAT------AA------AATTATTAATAATGGATTATTGGCTTTGA-AAATAGTGTTATTAATCTCCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GCT--TTTTTAGGTTTATGAGGAGACCGGGTTCGATATTACGGACCTCATCGATGCCAACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTACGGACCTCATCGAT........2112.0020000200
.........................CCCAGCCCATTGTGCAACGAGAGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
...........................CAGCCCATTGTGCAACGAGAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGAGGAGACCGGGTTCGATA.........................2411.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTTTGA-AAATAGTGTTATT......................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTACGGACCTCATCGAT........2011.0010000010
droYak3
AGGGCAAGATCAACGAGAACGAGGACCCAGCCCATTGTGCAACAAGAGAGGCAAGTCGGGAACAAATTAGAATTCCGAA-AATATTATTGTGT---------------------------------------------------------------------------------------------------------------------------------------------GCCTATAAATGGGGCAGAAATGG---------------TGAACTCATTTTTAAACAAATTGA---------------------TGAAATGAGATTACTTTTATATTCTTTAAGAAATCAATTTCTTTTAGTGCCTA---------AATA-----------------------------------TAATTATTGACATTGA-AAATAGTTTTATTAATCTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GCT--CTTTTAGGTTTATGAGGAGACCGGGTTCGATATCACGGACCTCATCGATGCCAACGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGACCTCATCGATGC......1811.00100100000000
..........CAACGAGAACGAGGACCCAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GCT--CTTTTAG..................................................1811.00110000000000
droEug1
AGGGAAAGATCAACGAGAACGAGGATCCAGCTCATTGCGCCACGAGAGAGGCAAGTCGGGAAAAA--------------------------------------------------------------AATGATTGCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTACT-----ATTTATTATAGTAAGGATTAATA-------------ATGCTTT---------------------AACTG-----------------------------------------------A---------------------------AC------TTCT-TG-GCT--GTTGCAGGTTTATGAAGAGACCGGGTTTGATATCACGGACACCATTGATGCCAACGASizeHit CountTotal NormTotal
No Reads
droBia1
AGGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGCGCCACGAGAGAGGCAAGTCGGGAACACTC------------------------------------------------------------AATGACCACA-------------------------AATTATAAACCAGTTATTGTTACTTATTATTTTATCCTAAAATCCATTGTTAA-------------------TACCATGAACGGAACAGTCATGTTCTTAATTTTCGTGTCGCACTTAATTTATTCAAAATTGAGATATTTAGTATTTATAATTCAGAAATGTG----------------------------------------------------------------------------------------------ACCATTTTATTCGA-A-------------------------------------------------------------------------------------------AAT----------------------------AGCATT------------------------------------GATTCCAATTC--TT-GCC--CTTGCAGGTTTATGAGGAAACCGGGTTCGACATCACGGACATCATCGATGCCAACGASizeHit CountTotal NormTotal
No Reads
droTak1
---GTAAGATAG-----AAACAGGAAG-------------------------GAGCTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAA-----------------TCAAATTC-----AATTA-----------------------------------------------A---------------------------CT------TTCTTGC-TCT--CTTGCAGGTTTACGAGGAAACCGGGTTTGACATTACGGACATTATTGATGCCAACGASizeHit CountTotal NormTotal
No Reads
droEle1
AGGGCAAGATCAATGAGAACGAGGATCCAGCCCATTGTGCCACGAGAGAGGCAAGTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGGGCAAGATTAACGAGAATGAGGATCCAGCACATTGTGCCACGAGAGAGGCAAGTCGTGGAT-------------------------TGTGCATGAATTAATTTGACCTGCAACTTTGCTAAATATAATGTTTGCATTCTTTATTAACCCCTATCGACTCAAATTTTTTATCTGT---------------------------------------GTTAGGATTATCTTTTTTAACCT----ATGGGC--------------------TTGT-----------------------------------------------------G-------------GGTTAA------------------------A---GATTAAGATTACTTAGACTTAATCAGATTTTGAATT------------------------------------------TGCTG-------------------------CCAGAA----------------------------------------AACAGAGTTGAATGTATCTTATAATCTTAT-----------------------------------TTTTCTGT--TCTCCATTT--TG-GCG--CCTGCAGGTTTATGAGGAGACCGGGTTCGACATCACGGATCTCATTGATGCCAACGASizeHit CountTotal NormTotal
No Reads
droFic1
TTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAGGATGGGTATATTTTATAAGAATATC---------------AATCGAATGTGAACATG--TTTTCTGA--TCATTATTT--GA-ACT--CCTGCAGGTTTATGAGGAGACCGGGTTCGACATCACGGACACCATCGATGCCAACGASizeHit CountTotal NormTotal
No Reads
droKik1
AGGGCAAGATAAATGAGAACGAGGATCCGGCACACTGTGCTACAAGAGAGGTGAGTCAGAAATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-TAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------AACTA---AT----------------------------TGTATTTAATAAAAA---------------------------A-------TTC-GTTGGCT--TACACAGGTTTATGAGGAGACCGGGTTCGATATTACGGACAACATCGATGCCAATGASizeHit CountTotal NormTotal
No Reads
droAna3
AAGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGTGCCACCAGAGAGGTAAGCTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTT-------------------------CCAGAAAC------------------TCATTCAAATACTAATAG-----------------------------------------------T---------------------------TA------TAA-T---TCT--CTTTCAGGTTTATGAGGAGACCGGCTTCGACATCACGGACATCATTGACGCCAACGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........CAACGAGAACGAGGATCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGACCGGCTTCGACATCACG....................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGGCTTCGACATCACGGAC.................2211.001100000
droBip1
AAGGCAAGATCAACGAGAACGAGGATCCAGCCCACTGTGCCACAAGAGAGGTAAGCTGTAACCTTCCTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CCAAGTACATCCTAAGCC-----------------------------------------------A---------------------------TA------T----AC-ATA--CTTGCAGGTTTATGAAGAGACCGGGTTCGACATCACAGACATCATTGACGCCAACGASizeHit CountTotal NormTotal
No Reads
dp5
AGGGGAAAATCAATGAGAACGAGGATCCAGCACATTGTGCAACAAGAGAGGTGAGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATAAACATGGCATTTT---------------------AATTG-----------------------------------------------A---------------------------TT------TCT-C---TTC--TTTTTAGGTTTACGAGGAAACTGGGTTCGACATCACCGACATCATCGATGCCAATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GAAAATCAATGAGAACGAGGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGGGTTCGACATCACCGAC.................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACATCACCGACATCATCGA.........2211.0010100000000
droPer2
AGGGGAAAATCAATGAGAACGAGGATCCAGCACATTGTGCAACAAGAGAGGTGAGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAATAAACATGGCATTTT---------------------AATTG-----------------------------------------------A---------------------------TT------TCT-C---TTC--TTTTTAGGTTTACGAGGAAACTGGGTTCGACATCACCGACATCATCGATGCCAATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGACATCATCGATGCCAATGA2411.001010000
...............................ACATTGTGCAACAAGAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droWil2
AGGGTAAAATTAACGAGAACGAGGATCCAGCCCATTGTGCCACCAGAGAGGTACATACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA----------------------------------------------------------------------------------------------------------GAAAAAAAACAAGATATTCT---------------------A-----------------------------------------------------TTCTATTCTTAATTTC--CCATTTGTT--TTTTGTTT-----TTTTCTGATTAGGTTTATGAGGAGACTGGTTTCGATATAACCGATATTATCGATGCCAACGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGGAGACTGGTTTC.............................1811.00100100
droVir3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---------------------AACTGAAAAT----------------------------TGTATT------------------------------------TA------TCC-A---TTT--GCTTTAGGTCTATGAGGAGACGGGCTTTGACATAACGGACATCATAGATGCAGATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGGCTTTGACATAACGGAC.................2212.002200000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGGGCTTTGACATAACGGAC.................2311.001000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAGGAGACGGGCTTTGAC..........................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGACATCATAGATGC......1911.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATAACGGACATCATAGAT........2311.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGAGACGGGCTTTGACA.........................2111.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGGGCTTTGACATAAC.....................2011.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATCATAGATGCAGATGA2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCTATGAGGAGACGGGCTTTGAC..........................2611.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGACATCATAGATGCAGAT..2211.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGGAGACGGGCTTTGACA.........................2211.001010000000000000000000000000000000000000000000000000000000000000
droMoj3
AGGGCAAAATCAATGAGCACGAGAATCCCGAACACTGTGCCACCAGGGAGGTGAGTAAAAATATAC---AAATTATATA-TATAT---TTTAT-----------------------------------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAT------TAAAAATAACAT---T---CCCTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GTT--GCCTTAGGTATATGAGGAGACGGGCTTTGACATAACGAACATCATAGATGCTGATGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGGGTAAAATCAACGAAAACGAGGATCCCGCACACTGTGCCACCAGGGAGGCAAGTAACAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGAAAAGAGAATTTTTAGCTAATATCAAATTG----------------------------------------------------------CTTCAAATTGCAAAATGGTCTAATCGTT--TTATAT----TT-ATT--GCTGTAGGTCTATGAGGAGACAGGCTTTGACATAACAAACGCCATTGATGCGGATGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................CACTGTGCCACCAGGGAGGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110

Generated: 05/17/2015 at 05:29 PM