ID:

dsi_7588

 Coordinate:

x:19965066-19965215 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.5 -6.3 -6.1

Flybase annnotation

CDS [x_19964808_19965057_+]; three_prime_UTR [x_19965058_19965909_+]; exon [x_19964808_19965909_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGGCGGGTATATCTTTTATATACGCGCTTGGCGGAGGCGGCAATCTATAGTTATACACACAAGTCGTATATATACACGTATACAAAACATATATTTTGTACGCAGATTTTGGTTGCGATCGCGCTTTAACTCTACTCTCAATTGTGAAACGACGGGCGCTAAGTATTCTGTATTAATTTCGCATTCTCCATATATATATTCGTAGT
********************************************************************************************************************************************..........((...((((...((((.....................))))..)))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 O002
Head
 GSM343915
embryo
...............................................................................................................................................................................................AACGACGGGCGCTAAGTATTCTGT................................... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTCGCATTCTCCATATATATATTCAA... 26 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................................TCTACTCTCAATTGTGAAACGACGGG.................................................. 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................GAAACGACGGGCGCTAAGTATTCTGTA.................................. 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TCTACTCTCAATTGTGAAACGACGGGCGC............................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTAATTCTACTCTCAATTGTGAAACGA...................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTCTACTCTCAATTGTGAAACGACGGG.................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGTACGCAGATTTTGGTTGC.......................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TATTTTGTACGCAGATTTTGGTTGCGAT....................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCTACTCTCAATTGTGAAACGACGGGC................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGAAACGACGGGCGCTAAGTATTCTGTA.................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACTCTCAATTGTGAAACGACGGGCGC............................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACGCAGATTTTGGTTGCGATCGCGCTT................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................TTGTACGCAGATTTTGGTTGCGAT....................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................GCGGAGGCGGCAATCTAT.............................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................CGGGCGCTAAGTATTCTGTATT................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTTTGGTTGCGATCGCGC.................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................AAGGCGTATATATACACGTATACA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAGTATTCTGTATTAATTTCGCATT..................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................TGCAGGCCCAGCAGTGAGCAG............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................TCAATTGTGAAACGACGGGCGCTAAG........................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CTACTCTCAATTGTGAAACGACGGGC................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACTCTCAATTGTGAAACGACGGGC................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTACGCAGATTTTGGTTG........................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................TTGGCTGGGGCGGCAATC................................................................................................................................................................. 18 2 7 0.29 2 0 0 1 0 0 0 1 0 0 0 0
...................................GCAGGTAGCAGGCGAGTATA................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1
........CCAGATGCAGAGGCGTATGCAG............................................................................................................................................................................................................................ 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................ATTGTGAAACGACTGGAGT............................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0
.......CCCAGCTGCACGCGCGC.................................................................................................................................................................................................................................. 17 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................AGTTTTTGGTTGCGA........................................................................................ 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TACGAGCGGGTCTACGTCCGCGCGTACGTCCGGGTCGTCACTCGTCCGCCCATATAGAAAATATATGCGCGAACCGCCTCCGCCGTTAGATATCAATATGTGTGTTCAGCATATATATGTGCATATGTTTTGTATATAAAACATGCGTCTAAAACCAACGCTAGCGCGAAATTGAGATGAGAGTTAACACTTTGCTGCCCGCGATTCATAAGACATAATTAAAGCGTAAGAGGTATATATATAAGCATCA
**************************************************..........((...((((...((((.....................))))..)))).))******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.................................GTCGTCACTCGTCCGCCC....................................................................................................................................................................................................... 18 0 1 2.00 2 0 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................TTGCTGCCCGCGATTCATAAG...................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................TCCGCCGTTAGATATCAATAT....................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................TGCGCGAAATTAAGATGAGA.................................................................... 20 2 2 0.50 1 0 0 0 0 0 1 0 0 0
................................................................................................TATGTATGTTCAGCA........................................................................................................................................... 15 1 10 0.50 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................................AAATTCAGATGAGAGT.................................................................. 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................CGCGCGCACGTCGGGTTCGTC................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................GGGCGAAATTGCGATGAG..................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................GAGCATGTGTTTTGTTTATAAA.............................................................................................................. 22 3 4 0.25 1 0 0 0 0 0 0 0 1 0
................................................................ATGCTCGAACCGCCT........................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 1
................................................................................................TATGTATGTTCAGCAGA......................................................................................................................................... 17 2 14 0.14 2 2 0 0 0 0 0 0 0 0
.................................................................................................ATGTATGTTCAGCAT.......................................................................................................................................... 15 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACGCTAGCGAGAAATTTA........................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 1 0 0
............................................................................................TCACTATGTGTCTTCAG............................................................................................................................................. 17 2 15 0.07 1 0 0 0 0 0 0 0 1 0
...................GCGCGTACATCAGGTTCGT.................................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:19965016-19965265 + dsi_7588 ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CACGTATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---CTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GT
droSec2 scaffold_8:3539855-3540104 + ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CACTTATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GT
dm3 chrX:21231824-21232073 + ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTCT------------AGT-TATACAC--A----------------------AGTCGTATA--------------------------------------------TATA------------CACATATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATATA-------------------------TATCCGTA-GT
droEre2 scaffold_4690:17762989-17763236 + ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATGAGCAGG------------------------------------------CGGGTATATTTTT-------------T--ATATACG---CGCTCAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------GGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTATACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GT
droYak3 X:20409947-20410196 + ATGCTCGCCCAGATGCAGGCACGCATGCAGGCCCAGCAATGAGCGGG------------------------------------------CGGGTATATTTTT-------------G--ATATACG---CGCTCAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATATA-------------------------TATTCGTA-GT
droEug1 scf7180000408193:242614-242861 - ATGATCGCCCAGATGCAAGCGCGCATGCAGGCCCAGCAATAGACAGA------------------------------------------CGGGTGTATTTTT-------------A--ATATACG---CGCTGAACGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACAAACA----------------------AGTCGTATA--------------------------------------------TCTA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GTTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAC-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GG
droBia1 scf7180000302432:380739-380985 - ATGCTTGCCCAAATGCAGGCGCGTATGCAGGCCCAGCAATGAGC-GG------------------------------------------CGGGTATATTTAT-------------T--ATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTATAC--------ATAGT-TATACACACA----------------------AGTCGTATA--------------------------------------------CATA------------CT--TATACACAACACATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---CTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-AT-ATTC------TGTATTAATTTCGCATTCTCCATAT-------------------------------ATTCGTA-GT
droTak1 scf7180000415769:165669-165940 + ATGCTCGCTCAAATGCAGGCGCGCATGCAGGCCCAGCAATGAGCAGG------------------------------------------CTCGTATATATATGTAC---TA----T--ATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTATAC--------ATAGT-TATACACACA----------------------ACTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---TGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATACATATAT----------ATAT---ACAAATAATCGTA-GG
droEle1 scf7180000491087:1175449-1175704 - ATGCTCGCCCAGATGCAGGCACGCATGCAGGCCCAGCAATGAAGAGG------------------------------------------CGGGTATATTTTT-------------TGGATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACTCA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGTTTTT---CGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATACA---------------------CATATATTCGTA-GG
droRho1 scf7180000779980:58623-58870 - ATGCTTGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATGAACAGG------------------------------------------CGGGTATATTTTG-------------T--ATATACG---CGCAGAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACTCA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCACCGTATATA---------------------------TATTCGTA-GG
droFic1 scf7180000453926:203768-204021 + ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATAAGTAGG------------------------------------------CGGGTATATATTA-------------T--ATACAAG---CCCTAAATGAAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACAGA----------------------AGTCGTATA--------------------------------------------TATA------------TATATATACACAACATATA--TTTTGT-ACGCAGATTTT---AGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTAAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATACATATA-----------------------TATTCGTA-GG
droKik1 scf7180000302586:289915-290205 - ATGCTTGCCCAAATGCAGGCGCGCATGCAGGCCCAGCAGTGAGGA-G------------------------------------------TGGG-----------------------------------------ACGGAGGCG--------------------------------------------GCAATCGAT------------AGT-TATATACACAAAA-------CAAAACAAGAAAAATCGTATA--------------T----------ATAGATATATACACGCATATATA------------CA--TATACAT-ATATATA--TTTTGT-ACGCAGATTTTTTAGGTT-GCGAT--------CGCGCTTTAA---TTCAACTCTCAATTTGTGAAATCGACGGGCGCTAA-GT-ATTC----TCTGTATTAATTTCGCATTCTCCATATATACACACATTTATACATTTACATA-TATATATTCGTA-GG
droAna3 scaffold_13117:3151878-3152173 - ATGCTGGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGATAAGG----------------------TGATGGATGCAGCTGG----CT---------------------------------------------GGATGCG------AT--G----------AG---AAGCAGCA-CCGAGTCGTGCAATCGATAA----------AGTTTATATGCAAA--ATGGGAAGCAAAATGATA----AAGTATA------------------------------------CATGCA--TATA------------CA--TAAACAT-ATATATA--TTTTGT-ATGCAGATTTA---AGTT-GCGAT--------CGCGCTTTAAATTCTATACTCTCAAT-TGTGAAA-CGACGGGCGCTAT-GT-AATC------TGTATTAATTTCGCATTCTTCATATACATATACA-----------------CTAATAATCGTA-GG
droBip1 scf7180000395515:21832-22093 - ATGCTGGCCCAAATGCAGGCGCGCATGCAGGCCCAGCAGTGAATAC-CATTCATCCTGACCCCAGCAG-TGACGCAGG-----------CTGAT----------------------------------------GCGGAGA-----------------------------AGCAGCACCCGAGTCGTGCAATCGAT------------A----------------------------------------TATA--------------------------------------------TATA------------CA--TA-----AACATATATTTTTTGTAACGCAGATTTA---AGTTCGCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAT-GT-AATC------TGTATTAATTTCGCATTCTTCATATACATATACA-----------------CTAATAATCGTA-GG
dp5 XL_group1a:1482162-1482455 - ATGCTGGCCCAGATGCAAGCACGCATGCAAGCCCAGCATTGAA---G--------CGTATCCAATCAATTGATACATACACCTACAT-----------ATATATACACATATATAT--ATATAAAAATCAAGAAGCGAA---------------------------------AAGCA-CTAAATTGTGCAATCGAT------------AGT-TATACACAAA----------------------AAACATACA--------------------------------------------TATA------------CA--TATATAT-ATATATA--TTTTGT-ACGCAGATTTT-TAAGTT-GCGGT--------CGCGCTTTA----CTATAATCTCA-C-TGTAAAA-CGAAGGGCGCTAAAGT-ATTT------TGTATTAATTTTGCATTCACCATATTTA---------------------------TAT-CATGTGT
droPer2 scaffold_53:316489-316782 + ATGCTGGCCCAGATGCAAGCACGCATGCAAGCCCAGCATTGAA---G--------CGTATCCAATCAATTGATACATACACCTACAT-----------ATATATACATATATATAT--ATATAAAAATCAAGAAGCGAA---------------------------------AAGCA-CTAAATTGTGCAATCGAT------------AGT-TATACACAAA----------------------AAACATACA--------------------------------------------TATA------------CA--TATATAT-ATATATA--TTTTGT-ACGCAGATTTT-TAAGTT-GCGGT--------CGCGCTTG-A---CTATAATCTCA-C-TGTAAAA-CGAAGGGCGCTAAAGT-ATTT------TGTATTAATTTTGCATTCACCATATTTA---------------------------TAT-CATGTGT
droWil2 scf2_1100000004909:3969022-3969268 + ATGTTGGCCCAAATGCAGGCACGCATGCAGGCACAGAAATAAAAGAG---------------------------------------------------------------------------AAG---CACTCGAAAAAAA------------------------------CCAGCA-CTTATTTGTGCAATAGATAT----------ATT-CACACACACA-------------------------CACACA--------------------------------------------CATA------------TA--TATATATATATTATA--CTTTAT-ATGCCGATTTG---TATTTTCATTCAAATTGGCACACTTTAA---T----CTCTCATT-TAGAAAT-CGAAGGGCGCTAA-AA-CTGATAA-ACTAC-TTGATTTTG--TTCTCCATATGCATA---------------------------AACTTA---
droVir3 scaffold_13042:4314710-4314976 + ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCACAAAAGTGAACAAACA----T---------------CTACGGGCTCGGGCGGCAGGT------------------------------------------------TGGCG---------------------GC---AGTTAGCG-CACGTTTGTGCAATTTACATATATATACACCGA-TATATATACA----------------------ACT---------------ATATATATATATAGAGATAGATATATAGACGTATATATA------------TA--TAT-----ATATATA--TATTGT-ACGCAGTTTTT--AAGTT-AAGTT--------CA---------------------------------CGATGGGCGCTAA-AT-TATC------TGT-TTATTTTTGCACTCTAAACACACACA---------------------------CACACA-A-
droMoj3 scaffold_6359:2111298-2111550 - ATGCTTGCACAAATGCAGGCGCGCATGCAGGCACAAAAATGAGCAGC------------------------------TTGAACAGAAGAT----------------------------------G---AGATGAGATGA--------------------------GAGAGCGTAGCA-C-GTATTGTGCAATCTAC------------ACA-TACACACACA----------------------C-AC--ATACATACCTTTTTTTTTA----------------------------GATA------------CA--TATAT---ATATATA--TTTTGT-ACGCAGTTTTT--AAGTT-GCGAT--------TGCGAT------------------------------------CGCTAG-TCTATTC-------GC-TTAGTTATGCATTTTACACTCACACACACACGAATATATTTA---------TATATGTA--T
droGri2 scaffold_14853:7178742-7179014 + ATGCTCGCTCAAATGCAGGCGCGCATGCAGGCTCAAAAGTGAGAGAA------------------------------------------CGA-T----------------------------------------GCGAAGACACATACACAGAGAGAAAGAGAGAGAGAGAGCAGCA-CACATTTGTGCAATTTACATATAT------AGA-TATATAT-------------------------------ATA----------------------------------------TATATTTATATACAAATCTTAA--TATATAC-ATATATT--TTTTGT-ACGCAGTTTTT--AAGTT-GCA-----------GCGCTTGCA---TT-----TTC----------A-CGATGAGCGCTAT-CT-ATTT---GTTTGTTTTTATTTTACATTCTAAACACATATATA----------TGTGC---------AT--ATA-TA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CACGTATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---CTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................AA-CGACGGGCGCTAA-GT-ATTC------TGT...............................................................2413.00300300000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCATTCTCCATATATA---------------------------TATTCAA....2612.00200000000000002000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCTCAAT-TGTGAAA-CGACGGG......................................................................................2612.00200000011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-CGACGGGCGCTAA-GT-ATTC------TGTA..............................................................2712.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCTCAAT-TGTGAAA-CGACGGGCGC...................................................................................2911.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................TGT-ACGCAGATTTT---GGTT-GC...........................................................................................................................................2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................TA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------................................................................................................................................2811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2711.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGAAA-CGACGGGCGCTAA-GT-ATTC------TGTA..............................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCAAT-TGTGAAA-CGACGGGCGC...................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................T-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTT.........................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................TTGT-ACGCAGATTTT---GGTT-GCGAT--------................................................................................................................................2411.00100000000001000000
......................................................................................................................................GCGGAGGCG--------------------------------------------GCAATCTAT------------.....................................................................................................................................................................................................................................................................................................1811.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGCTAA-GT-ATTC------TGTATT............................................................2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................TTTT---GGTT-GCGAT--------CGCGC...........................................................................................................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-GT-ATTC------TGTATTAATTTCGCATT.................................................2611.00100000000100000000
.........................TGCAGGCCCAGCAGTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAAT-TGTGAAA-CGACGGGCGCTAA-G..............................................................................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2511.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................GT-ACGCAGATTTT---GGTT-G............................................................................................................................................1811.00101000000000000000
droSec2
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CACTTATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................CCCAGCAGTGAGCAGG------------------------------------------CGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAAT-TGTGAAA-CGACGGGCG....................................................................................2111.0011000
..........................................................................................................................ACG---CGCTTGGCGGAGGCG--------------------------------------------GCA.......................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................CTACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2611.0010010
....................................CAGTGAGCAGG------------------------------------------CGGGTATT....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
................................CCAGCAGTGAGCAGG------------------------------------------CGGGTATAT...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAT-TGTGAAA-CGACGGG......................................................................................1811.0010010
..................................................................................................................................................................................................................................................................................................................................................GT-ACGCAGATTTT---GGTT-GCGAT--------CGC.............................................................................................................................2511.0010100
.........................................................................................................................TACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2111.0010010
dm3
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGAGCAGG------------------------------------------CGGGTATATCTTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTCT------------AGT-TATACAC--A----------------------AGTCGTATA--------------------------------------------TATA------------CACATATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATATA-------------------------TATCCGTA-GTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAA-CGACGGGCGCT..................................................................................18112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................CGCGCATGCAGGCCCAGCAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------................................................................................................................................2615.0050000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2514.0040000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................T-ACGCAGATTTT---GGTT-GCGAT--------CGCGC...........................................................................................................................2614.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTC------TGTATTAATTTCGCATTCTCCATA..........................................2714.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCAAT-TGTGAAA-CGACGGGCGC...................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000
........................................................................................................................ATACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................AGGCGCGCATGCAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TT---GGTT-GCGAT--------CGCGCTTTAA---T..................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-CGACGGGCGCTAA-GT-AT..........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCCAGCAGTGAGCAGG------------------------------------------CGG.........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATCTCT------------.....................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTACTCTCAAT-TGTGAAA-CGACGGGC.....................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTGAAA-CGACGGGCGC...................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCTACTCTCAAT-TGTGAAA-CGACG........................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................ATACG---CGCTTGGCGGAGGCG--------------------------------------------GCA.......................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCTCAAT-TGTGAAA-CGACGGGCGCTAA-G..............................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAA-CGACGGGCGCTAA-GT-............................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................ATACG---CGCTTGGCGGAGGC.......................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCGCTAA-GT-ATTC------TGTATT............................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTGAAA-CGACGGGCGCTAA-GT-............................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGATTTT---GGTT-GCGAT--------CGCGCTTT........................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACGGGCGCTAA-GT-ATTC------TGTATT............................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................T--------CGCGCTTTAA---TTCTACTCTCAAT-TG...................................................................................................2612.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATA--TTTTGT-ACGCAGATTTT---GGT...............................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TT.................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTT-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CGCTTGGCGGAGGCG--------------------------------------------GCAATCTCT------------A....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCTTTAA---TTCTACTCTCAAT-TGTGAAA-C............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TGT-ACGCAGATTTT---GGTT-GCGAT--------CGC.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TC------TGTATTAATTTCGCATTCT...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................CGCAGATTTT---GGTT-GCGAT--------CGCGC...........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ATATACAAAACATATA--TT.....................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGAAA-CGACGGGCGCTAA-GT-ATTC------TGTA..............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTCGCATTCTCCATATATA......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATC....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................ATCTCT------------AGT-TATACAC--A----------------------AGTCGTA..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GT-ACGCAGATTTT---GGTT-GCGAT--------CGCGC...........................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAAT-TGTGAAA-CGACGGGCGCTAA-G..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAAT-TGTGAAA-CGACGGGCGCT..................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTC------TGTATTAATTTCGCAT..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................T-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTT.........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................CAGATTTT---GGTT-GCGAT--------CGC.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................TT-------------T--ATATACG---CGCTTGGCGGAGGC.......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CT------------AGT-TATACAC--A----------------------AGTCGTATA--------------------------------------------............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................T-------------T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................ACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AT--------CGCGCTTTAA---TTCTACTCTCAAT-TGT..................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AAA-CGACGGGCGCTAA-GT-ATTC------TGTAT.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAT-TGTGAAA-CGACGGGCGCT..................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCGCATTCTCCATATAT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTGAAA-CGACGGGCGCTAA-GA-............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................TTGGCGGAGGCG--------------------------------------------GCAATCTCT------------.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................CAGG------------------------------------------CGGGTATATCTTT-------------T--...............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------..................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTT---GGTT-GCGAT--------CGCGCTTTAA---TTC................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGCTAA-GT-ATTC------TGTATT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAT-TGTGAAA-CGACGGG......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TATCTTT-------------T--ATATACG---CGCTTGGCGGA..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAAT-TGTGAAA-CGACGGGCATC..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGAAA-CGACGGGCGCTAA-GT-ATTC------TG................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TATA------------CACATATACAAAACAT............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GAT--------CGCGCTTTAA---TTCTACTCT..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................AGCAGTGAGCAGG------------------------------------------CGGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........CAGATGCAGGCGCGCATGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TCT------------AGT-TATACAC--A----------------------AGTCGT...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................GCCCAGCAGTGAGCAGG------------------------------------------CGGG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGATTTT---GGTT-GCGAT--------CGCGCTTTAA---...................................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CTTGGCGGAGGCG--------------------------------------------GCAATCTCT------------A....................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCAGTGAGCAGG------------------------------------------CGGGTATATC..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTC------TGTATTAATTTCGCATTCTCC.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CG---CGCTTGGCGGAGGCG--------------------------------------------GCAAT.....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................G---CGCTTGGCGGAGGCG--------------------------------------------GCA.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AGT-TATACAC--A----------------------AGTCGTAT.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACG---CGCTTGGCGGAGGCG--------------------------------------------GG........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AA-CGACGGGCGCTAA-GT-ATTC------TGTATT............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................T-TGTGAAA-CGACGGGCGCTAA-GT-AT..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGACGGGCGCTAA-GT-ATTC------TGT...............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTGAAA-CGACGGGCGCT..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................TACG---CGCTTGGCGGAGGCG--------------------------------------------GCAATC....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TA--TTTTGT-ACGCAGATTTT---GGT...............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................T-TGTGAAA-CGACGGGCGCTAA-GT-A...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGATTTT---GGTT-GCGAT--------CGCGCT..........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TACAC--A----------------------AGTCGTATA--------------------------------------------TATA------------CA..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................AC--A----------------------AGTCGTATA--------------------------------------------TATA------------CAC.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................T--ATATACG---CGCTTGGCGGAGGCG--------------------------------------------..........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................T------------AGT-TATACAC--A----------------------AGTCGTATA--------------------------------------------............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGCGCTAA-GT-ATTC------TGTAT.............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGATTTT---GGTT-GCGAT--------CGC.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCATATATATA-------------------------TATCCG.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TCT------------AGT-TATACAC--A----------------------AGTCGTATA--------------------------------------------TATA------------............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................TACG---CGCTTGGCGGAGGCG--------------------------------------------GC........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAAT-TGTGAAA-CGACGGGCG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................CAGGCCCAGCAGTGAGCAGG------------------------------------------CGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T-GCGAT--------CGCGCTTTAA---TTCTACTCTC.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-CGACGGGCGCTAA-G..............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCTTTAA---TTCTACTCTCA........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTTTGT-ACGCAGATTTT---GGTT-GCGA.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................CAGCAGTGAGCAGG------------------------------------------CGGGTATATCT.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................T-TGTGAAA-CGACGGGCGC...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AA-CGACGGGCGCTAA-GT-ATTC------TG................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ATATACG---CGCTTGGCGGAGGC.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................TCGTATA--------------------------------------------TATA------------CACATATACAAAA...............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TG................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGTCGTATA--------------------------------------------TATA------------CACATATACAAA................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................T-TGTGAAA-CGACGGGCGCTAA-GT-............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ATTC------TGTATTAATTTA......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................A----------------------AGTCGTATA--------------------------------------------TATA------------CACATATA....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ATTC------TGTATTAATTTCGCATTCC...............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAA-GT-ATTC------TGTAAC............................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
droEre2
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATGAGCAGG------------------------------------------CGGGTATATTTTT-------------T--ATATACG---CGCTCAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------GGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTATACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCAAT-TGTGAAA-CGACGGGCGC...................................................................................2716.0060000006
.............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCTAA-GT-ATTC------TGTATTAATTT.......................................................2511.0011000000
.........................TGCAGGCCCAGCAATGAGCAGG------------------------------------------CGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTAA---TTATACTCTCAAT-TGTGAAA-C............................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAATTTCGCATTCTCCATAT.........................................2311.0010000010
................................................................................................................................................................................................................AGT-TATACACACA----------------------GGTCGT...........................................................................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAT-TGTGAAA-CGACGGGCGCTAA-GT-A...........................................................................2711.0010000100
droYak3
ATGCTCGCCCAGATGCAGGCACGCATGCAGGCCCAGCAATGAGCGGG------------------------------------------CGGGTATATTTTT-------------G--ATATACG---CGCTCAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACACA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATATA-------------------------TATTCGTA-GTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................TCTAT------------AGT-TATACACACA----------------------AGTCGTA..........................................................................................................................................................................................................................................................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................AT-TGTGAAA-CGACGGGCG....................................................................................1811.00101000000000
droEug1
ATGATCGCCCAGATGCAAGCGCGCATGCAGGCCCAGCAATAGACAGA------------------------------------------CGGGTGTATTTTT-------------A--ATATACG---CGCTGAACGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACAAACA----------------------AGTCGTATA--------------------------------------------TCTA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---GTTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAC-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATA---------------------------TATTCGTA-GGSizeHit CountTotal NormTotal
No Reads
droBia1
ATGCTTGCCCAAATGCAGGCGCGTATGCAGGCCCAGCAATGAGC-GG------------------------------------------CGGGTATATTTAT-------------T--ATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTATAC--------ATAGT-TATACACACA----------------------AGTCGTATA--------------------------------------------CATA------------CT--TATACACAACACATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---CTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-AT-ATTC------TGTATTAATTTCGCATTCTCCATAT-------------------------------ATTCGTA-GTSizeHit CountTotal NormTotal
No Reads
droTak1
ATGCTCGCTCAAATGCAGGCGCGCATGCAGGCCCAGCAATGAGCAGG------------------------------------------CTCGTATATATATGTAC---TA----T--ATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTATAC--------ATAGT-TATACACACA----------------------ACTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGATTTT---TGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATACATATAT----------ATAT---ACAAATAATCGTA-GGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGCTCGCCCAGATGCAGGCACGCATGCAGGCCCAGCAATGAAGAGG------------------------------------------CGGGTATATTTTT-------------TGGATATACG---CGCTGAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACTCA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACACAACATATA--TTTTGT-ACGCAGTTTTT---CGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATATACA---------------------CATATATTCGTA-GGSizeHit CountTotal NormTotal
No Reads
droRho1
ATGCTTGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATGAACAGG------------------------------------------CGGGTATATTTTG-------------T--ATATACG---CGCAGAGCGGAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACTCA----------------------AGTCGTATA--------------------------------------------TATA------------CA--TATACAAAACATATA--TTTTGT-ACGCAGATTTT---GGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCACCGTATATA---------------------------TATTCGTA-GGSizeHit CountTotal NormTotal
No Reads
droFic1
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAATAAGTAGG------------------------------------------CGGGTATATATTA-------------T--ATACAAG---CCCTAAATGAAGGCG--------------------------------------------GCAATCTAT------------AGT-TATACACAGA----------------------AGTCGTATA--------------------------------------------TATA------------TATATATACACAACATATA--TTTTGT-ACGCAGATTTT---AGTT-GCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTAAAA-CGACGGGCGCTAA-GT-ATTC------TGTATTAATTTCGCATTCTCCATATACATATA-----------------------TATTCGTA-GGSizeHit CountTotal NormTotal
No Reads
droKik1
ATGCTTGCCCAAATGCAGGCGCGCATGCAGGCCCAGCAGTGAGGA-G------------------------------------------TGGG-----------------------------------------ACGGAGGCG--------------------------------------------GCAATCGAT------------AGT-TATATACACAAAA-------CAAAACAAGAAAAATCGTATA--------------T----------ATAGATATATACACGCATATATA------------CA--TATACAT-ATATATA--TTTTGT-ACGCAGATTTTTTAGGTT-GCGAT--------CGCGCTTTAA---TTCAACTCTCAATTTGTGAAATCGACGGGCGCTAA-GT-ATTC----TCTGTATTAATTTCGCATTCTCCATATATACACACATTTATACATTTACATA-TATATATTCGTA-GGSizeHit CountTotal NormTotal
No Reads
droAna3
ATGCTGGCCCAGATGCAGGCGCGCATGCAGGCCCAGCAGTGATAAGG----------------------TGATGGATGCAGCTGG----CT---------------------------------------------GGATGCG------AT--G----------AG---AAGCAGCA-CCGAGTCGTGCAATCGATAA----------AGTTTATATGCAAA--ATGGGAAGCAAAATGATA----AAGTATA------------------------------------CATGCA--TATA------------CA--TAAACAT-ATATATA--TTTTGT-ATGCAGATTTA---AGTT-GCGAT--------CGCGCTTTAAATTCTATACTCTCAAT-TGTGAAA-CGACGGGCGCTAT-GT-AATC------TGTATTAATTTCGCATTCTTCATATACATATACA-----------------CTAATAATCGTA-GGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................G------AT--G----------AG---AAGCAGCA-CCGAGT.............................................................................................................................................................................................................................................................................................................................2012.002000110
.....................................................................................................................................................................................................................................................................................................................................................ATGCAGATTTA---AGTT-GCGAT--------CGCGC...........................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................GATTTA---AGTT-GCGAT--------CGCGCT..........................................................................................................................2111.001010000
.............................................................................................................................................CG------AT--G----------AG---AAGCAGCA-CCGAGTCGTG.........................................................................................................................................................................................................................................................................................................................2511.001010000
......................................................................GATGGATGCAGCTGG----CT---------------------------------------------GGATGCG------................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..............................................................................................................................................G------AT--G----------AG---AAGCAGCA-CCGAGTCGTGCA.......................................................................................................................................................................................................................................................................................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................CGACGGGCGCTAT-GT-AATC------TGTA..............................................................2311.001000010
........................................GATAAGG----------------------TGATGGATGCAGCTGG----C...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...................................................................................GG----CT---------------------------------------------GGATGCG------AT--G----------AG---AAGCAGCA-CC.................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................G----------AG---AAGCAGCA-CCGAGTCGT..........................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
ATGCTGGCCCAAATGCAGGCGCGCATGCAGGCCCAGCAGTGAATAC-CATTCATCCTGACCCCAGCAG-TGACGCAGG-----------CTGAT----------------------------------------GCGGAGA-----------------------------AGCAGCACCCGAGTCGTGCAATCGAT------------A----------------------------------------TATA--------------------------------------------TATA------------CA--TA-----AACATATATTTTTTGTAACGCAGATTTA---AGTTCGCGAT--------CGCGCTTTAA---TTCTACTCTCAAT-TGTGAAA-CGACGGGCGCTAT-GT-AATC------TGTATTAATTTCGCATTCTTCATATACATATACA-----------------CTAATAATCGTA-GGSizeHit CountTotal NormTotal
No Reads
dp5
ATGCTGGCCCAGATGCAAGCACGCATGCAAGCCCAGCATTGAA---G--------CGTATCCAATCAATTGATACATACACCTACAT-----------ATATATACACATATATAT--ATATAAAAATCAAGAAGCGAA---------------------------------AAGCA-CTAAATTGTGCAATCGAT------------AGT-TATACACAAA----------------------AAACATACA--------------------------------------------TATA------------CA--TATATAT-ATATATA--TTTTGT-ACGCAGATTTT-TAAGTT-GCGGT--------CGCGCTTTA----CTATAATCTCA-C-TGTAAAA-CGAAGGGCGCTAAAGT-ATTT------TGTATTAATTTTGCATTCACCATATTTA---------------------------TAT-CATGTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................ATCCAATCAATTGATACATACACCT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAATCTCA-C-TGTAAAA-CGAAGGGC.....................................................................................2411.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TGTATTAATTTTGCATTCACCATAT.........................................2711.0010000000010
..........................................................ATCCAATCAATTGATACATACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................A-CGAAGGGCGCTAAAGT-ATTT------TGTA..............................................................2511.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACCATATTTA---------------------------TAT-CATGT..2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................TA----CTATAATCTCA-C-TGTAAAA-CGAAG........................................................................................2611.0010100000000
..........................................................ATCCAATCAATTGATACATACACCTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
droPer2
ATGCTGGCCCAGATGCAAGCACGCATGCAAGCCCAGCATTGAA---G--------CGTATCCAATCAATTGATACATACACCTACAT-----------ATATATACATATATATAT--ATATAAAAATCAAGAAGCGAA---------------------------------AAGCA-CTAAATTGTGCAATCGAT------------AGT-TATACACAAA----------------------AAACATACA--------------------------------------------TATA------------CA--TATATAT-ATATATA--TTTTGT-ACGCAGATTTT-TAAGTT-GCGGT--------CGCGCTTG-A---CTATAATCTCA-C-TGTAAAA-CGAAGGGCGCTAAAGT-ATTT------TGTATTAATTTTGCATTCACCATATTTA---------------------------TAT-CATGTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................AAGCACGCATGCAAGCCCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
ATGTTGGCCCAAATGCAGGCACGCATGCAGGCACAGAAATAAAAGAG---------------------------------------------------------------------------AAG---CACTCGAAAAAAA------------------------------CCAGCA-CTTATTTGTGCAATAGATAT----------ATT-CACACACACA-------------------------CACACA--------------------------------------------CATA------------TA--TATATATATATTATA--CTTTAT-ATGCCGATTTG---TATTTTCATTCAAATTGGCACACTTTAA---T----CTCTCATT-TAGAAAT-CGAAGGGCGCTAA-AA-CTGATAA-ACTAC-TTGATTTTG--TTCTCCATATGCATA---------------------------AACTTA---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................ATA--CTTTAT-ATGCCGATTTG---T.................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATT-TAGAAAT-CGAAGGGCGCTAA-A..............................................................................2511.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTCTCATT-TAGAAAT-CGAAGG.......................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAC-TTGATTTTG--TTCTCCATATGCAT.....................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................TG---TATTTTCATTCAAATTGG................................................................................................................................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................TTTTCATTCAAATTGGCACAC...........................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATT-TAGAAAT-CGAAGGGC.....................................................................................1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCATT-TAGAAAT-CGAAGGGC.....................................................................................2111.00100001
droVir3
ATGCTCGCCCAGATGCAGGCGCGCATGCAGGCACAAAAGTGAACAAACA----T---------------CTACGGGCTCGGGCGGCAGGT------------------------------------------------TGGCG---------------------GC---AGTTAGCG-CACGTTTGTGCAATTTACATATATATACACCGA-TATATATACA----------------------ACT---------------ATATATATATATAGAGATAGATATATAGACGTATATATA------------TA--TAT-----ATATATA--TATTGT-ACGCAGTTTTT--AAGTT-AAGTT--------CA---------------------------------CGATGGGCGCTAA-AT-TATC------TGT-TTATTTTTGCACTCTAAACACACACA---------------------------CACACA-A-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................TATATAGACGTATATATA------------TA--T.......................................................................................................................................................................................2123.006001000000000000001000020000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATATAGACGTATATATA------------TA--TAT-----................................................................................................................................................................................2322.505000000000000000000100000000400000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATAGACGTATATATA------------TA--T.......................................................................................................................................................................................2021.503000000000000000001010000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T-AAGTT--------CA---------------------------------CGATGGGCGCTAA-AT-TAT.........................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T-AAGTT--------CA---------------------------------CGATGGGCGCTAA-AT-TATC------..................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
.............................................AACA----T---------------CTACGGGCTCGGGCGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTT--AAGTT-AAGTT--------CA---------------------------------CGATGGG......................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------CGATGGGCGCTAA-AT-TATC------TGT-..............................................................2411.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATAGACGTATATATA------------TA--TAT-----................................................................................................................................................................................2221.002000000000000000000100000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GTT-AAGTT--------CA---------------------------------CGATGGGCGCTAA-A..............................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................AGGT------------------------------------------------TGGCG---------------------GC---AGTTAGCG-CA.................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
...........GATGCAGGCGCGCATGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
........................ATGCAGGCACAAAAGTGAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TGT-ACGCAGTTTTT--AAGTT-AAGTT--------................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GTT-AAGTT--------CA---------------------------------CGATGGGCGCTAA-...............................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................GGT------------------------------------------------TGGCG---------------------GC---AGTTAGCG-C..................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AAGTT-AAGTT--------CA---------------------------------CGATGGGCGCTAA-A..............................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATATAGACGTATATATA------------TA--TC......................................................................................................................................................................................2230.672000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATATAGACGTATATATA------------TA--........................................................................................................................................................................................2030.672000000000000000000000000000000010000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................TATAGACGTATATATA------------TA--TAT-----................................................................................................................................................................................2120.501000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................TATAGACGTATATATA------------TA--TA......................................................................................................................................................................................2020.501010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATATAGACGTATATATA------------TA--........................................................................................................................................................................................1930.331000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TATATAGACGTATATATA------------TA--C.......................................................................................................................................................................................2170.141000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ATAGACGTATATATA------------TA--TAA-----................................................................................................................................................................................2090.111000000000000000000000000000000001000000000000000000000000000000
droMoj3
ATGCTTGCACAAATGCAGGCGCGCATGCAGGCACAAAAATGAGCAGC------------------------------TTGAACAGAAGAT----------------------------------G---AGATGAGATGA--------------------------GAGAGCGTAGCA-C-GTATTGTGCAATCTAC------------ACA-TACACACACA----------------------C-AC--ATACATACCTTTTTTTTTA----------------------------GATA------------CA--TATAT---ATATATA--TTTTGT-ACGCAGTTTTT--AAGTT-GCGAT--------TGCGAT------------------------------------CGCTAG-TCTATTC-------GC-TTAGTTATGCATTTTACACTCACACACACACGAATATATTTA---------TATATGTA--TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........ACAAATGCAGGCGCGCATGCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-TCTATTC-------GC-TTAGTTATG.....................................................2111.001000001
droGri2
ATGCTCGCTCAAATGCAGGCGCGCATGCAGGCTCAAAAGTGAGAGAA------------------------------------------CGA-T----------------------------------------GCGAAGACACATACACAGAGAGAAAGAGAGAGAGAGAGCAGCA-CACATTTGTGCAATTTACATATAT------AGA-TATATAT-------------------------------ATA----------------------------------------TATATTTATATACAAATCTTAA--TATATAC-ATATATT--TTTTGT-ACGCAGTTTTT--AAGTT-GCA-----------GCGCTTGCA---TT-----TTC----------A-CGATGAGCGCTAT-CT-ATTT---GTTTGTTTTTATTTTACATTCTAAACACATATATA----------TGTGC---------AT--ATA-TASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................GCA---TT-----TTC----------A-CGATGAGCGC...................................................................................1911.00101

Generated: 05/18/2015 at 11:35 AM