ID:

dsi_7587

 Coordinate:

3r:378979-379128 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

ACAGAAACGGAAGAGAACAAGATAGAACGATTTCATCGACTATCAGATACCCGTTACTCAGATACATCAGATACTCCACACGCAGTCTATCCCAGAATTTCCAATTCGAATATGTTTGGTTTTTATTTTCGCCAATATGAATCGATATTTCAAGTGATTTTTAGAGACTTTATCGTTCTCTCTGGATTTTTATATTTCAGTTGTGATGTCGGCGCCACATCTTCAGCTACAGAAATTTGCATAGATTGAA
**************************************************............................................(((..((((....((((......((((((((...((((.(((((......)))))....))))....)))))))).....))))....))))..))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
..................................................CCGTTACTCAGATACATCATATACT............................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................................TCCACACGCAGTCTAGCCCAGAATT....................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................................CGGCGCCAGATCTTCAGA....................... 18 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................GTCGGCGCCAGATCTTC.......................... 17 1 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................TTTTTATATTTCAGT................................................. 15 0 3 0.33 1 0 0 0 0 1 0 0
................................................................................................................................................................................................TATTTTAGTTGTGATGGC........................................ 18 2 8 0.25 2 0 0 0 2 0 0 0
..........................................TCAGATACCCGTTACTTAGATAC......................................................................................................................................................................................... 23 1 4 0.25 1 0 0 0 0 0 1 0
...............................TTCATCGACTATCAGATACC....................................................................................................................................................................................................... 20 0 4 0.25 1 0 0 0 1 0 0 0
...........................................................................................................GAATATGTTGGGCTTTTTTTTT......................................................................................................................... 22 3 12 0.08 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................GTGATGTCGGCCCCCCATT............................. 19 3 14 0.07 1 1 0 0 0 0 0 0
..........................................TCAGATACCCGTTACTCAGAT........................................................................................................................................................................................... 21 0 16 0.06 1 0 0 0 0 1 0 0
.....................................GACTATCAGATACCCGTTA.................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

TGTCTTTGCCTTCTCTTGTTCTATCTTGCTAAAGTAGCTGATAGTCTATGGGCAATGAGTCTATGTAGTCTATGAGGTGTGCGTCAGATAGGGTCTTAAAGGTTAAGCTTATACAAACCAAAAATAAAAGCGGTTATACTTAGCTATAAAGTTCACTAAAAATCTCTGAAATAGCAAGAGAGACCTAAAAATATAAAGTCAACACTACAGCCGCGGTGTAGAAGTCGATGTCTTTAAACGTATCTAACTT
**************************************************............................................(((..((((....((((......((((((((...((((.(((((......)))))....))))....)))))))).....))))....))))..))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M023
head
.....................................CTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 23 0 20 4.55 91 91 0 0 0 0 0 0 0 0 0
..................................TAGCTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 0 3 2.67 8 0 2 3 1 0 2 0 0 0 0
........................................................................................................................................................................................................................TGTAGAAGTCGATGTCTTTAAACGTAT....... 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.................................................................................................................................GCTGTAATACTTAGCTGTAAAGT.................................................................................................. 23 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0
........................ATTGCTAAAGTAGCTGATAGTCTATG........................................................................................................................................................................................................ 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................TAGCTGATAGTCTATGGTCAATGAGT.............................................................................................................................................................................................. 26 1 5 1.20 6 0 1 0 5 0 0 0 0 0 0
...............................................ATGGGCAATGAGTCTATGTAGT..................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................AAGTAGCTGAAAGTCTATGGGCAAT.................................................................................................................................................................................................. 25 1 2 1.00 2 0 1 1 0 0 0 0 0 0 0
........................ATTGCTAAAGTAGCTGATAGTCTAT......................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................TGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 22 0 20 0.85 17 0 0 16 0 0 1 0 0 0 0
..................................TAGCTGATAGTCTAAGGGCAATGAGT.............................................................................................................................................................................................. 26 1 3 0.67 2 0 0 0 2 0 0 0 0 0 0
..................................TCGCTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 18 0.50 9 1 0 7 1 0 0 0 0 0 0
..............................................................................................................................................................AAAATCTCGGAAGTAGCAA......................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0
................................................................GTAGTCTACGAGGTGCGGGTCA.................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................GGGTCTTAAAGGTTGAGTTTAAA......................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0
..................................TAGCTGATATTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 7 0.29 2 0 2 0 0 0 0 0 0 0 0
..................................TAGCAGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
..................................TAGCCGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................AGCTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 25 0 20 0.25 5 0 2 2 1 0 0 0 0 0 0
..................................TAGCTGATAGTCTGTGGGCAATGAGT.............................................................................................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................TGATAGTCTATGGGCAATGAGTCTAT.......................................................................................................................................................................................... 26 0 12 0.25 3 1 0 0 0 1 1 0 0 0 0
..................................TAGCTGACAGTCTATGGTCAATGAGT.............................................................................................................................................................................................. 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................TAGCTGATAGTCTATGGGCAATGAAT.............................................................................................................................................................................................. 26 1 11 0.18 2 0 0 2 0 0 0 0 0 0 0
..................................TATCTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..................................TAGCTGAAAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0
...................................AGCTGATAGTCTAAGGGCAATGAGT.............................................................................................................................................................................................. 25 1 20 0.15 3 0 0 0 3 0 0 0 0 0 0
..........................................AGTCTATGGGCAATG................................................................................................................................................................................................. 15 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
........................................ATAGTCTATGGGCAATGAGTCTAT.......................................................................................................................................................................................... 24 0 14 0.14 2 0 2 0 0 0 0 0 0 0 0
..................................TATCGGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
.................................ATAGCTGATGGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 27 2 15 0.13 2 0 0 0 2 0 0 0 0 0 0
....................................................................................CAGATCGGGTCTTAAACG.................................................................................................................................................... 18 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0
.....................................................AATGAGTTTATGTAGGCT................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1
..................................TAGCTGGTAGTCTATGGGCAA................................................................................................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...............................ATATAGCTGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 29 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
..................................TAGCTGATAGTCTATGGTCAAAGAGT.............................................................................................................................................................................................. 26 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0
................................AATAGCAGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 28 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..................................TAGCAGATAGTCTATGGGCAAAGAGT.............................................................................................................................................................................................. 26 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0
.................................ATAGCTGATAGTCTATGGGCAAT.................................................................................................................................................................................................. 23 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0
..........................................................................AGGTGTGGGTCGGATAG............................................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0
.......................................GATAGTCTATGGGCAATGAGTCTAT.......................................................................................................................................................................................... 25 0 12 0.08 1 0 0 0 0 1 0 0 0 0 0
......................................TGATAGTCTATGGGCAATGAGTCTA........................................................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0
......................................TGATAGTCTATGGGCAATGAGTCT............................................................................................................................................................................................ 24 0 16 0.06 1 0 0 0 1 0 0 0 0 0 0
.....................................CTGATAGTCTATGGGCAATGAGTCT............................................................................................................................................................................................ 25 0 16 0.06 1 0 0 0 0 0 0 0 0 1 0
...............................................ATGGGCAATGAGTCTAT.......................................................................................................................................................................................... 17 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCCGCGGTGTAGAAAT......................... 17 2 18 0.06 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TAGGGTCTTAAAAGT................................................................................................................................................... 15 1 19 0.05 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................AAAATATAGTCAACACTA........................................... 18 2 19 0.05 1 0 0 0 0 0 0 0 0 1 0
........................................ATAGTCTATGGGCAATGAGTCT............................................................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..................................TAGCTGATAGTCTATA........................................................................................................................................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................CTTAAAGGTTAAGGTT............................................................................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................AGCTGATAGTCTATGGGCAA................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................TCGCTGATACTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAGCTATAAAGTCAACATTA........................................... 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.....................................CTGATAGTCTATGGGCAATGA................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..................................TCGCTGATAGTCCATGGGCAATGAGT.............................................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................CAAGTAGCTGAAAGTCTATGGGCAAT.................................................................................................................................................................................................. 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..........................................AGTCTATGGGCAATGAG............................................................................................................................................................................................... 17 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
....................................GCTGATAGTCTATGGGCAATGA................................................................................................................................................................................................ 22 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..................................TCGCGGATAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
......................................TGATAGTCTATGGGCAA................................................................................................................................................................................................... 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................AGCTGGTAGTCTATGGGCAATGAGT.............................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:378929-379178 - dsi_7587 ACAGAAACGGAAGAGAACAAGATAGAACGATTTCATCGACTATCAGATACCCGTTACTCAGATACATC------AGATA----CTCCACACGCAGTCTATCCCAGAATT------TCCAATTC-----GAATATGTTT--GGTTTTT-------------ATTTTCGCCAATATGAATCGATATTTCAAGTGATTTTTAG-----------------------------------------------------------------------------------------------------------------------AGACTTTATCGTT--CTCTCTGGATTTTTATATTTCAGTTGTGATGTCGGCGCCACATCTTCAGCTACAGAAATTTGCATAGATTGAA
droSec2 scaffold_6:549146-549395 + ACAGAAACAGAAGAGAACAAGATAGAACGATTTCATCGACTATCAGATACCCGTTACTCAGATACATC------AGATA----CTCCACACGCAGTCTAGCCCAGAATT------TCCAATTC-----GAATATTTTT--GGTTTTT-------------ATTTTCGCCAATATGAATCGATATTTCATGTGATTTTTAG-----------------------------------------------------------------------------------------------------------------------AGACTTTATCGTT--CTCTCTGGATTTTTATATTTCAGTTGTGATGTCGGCGCCACATCTTCAGCTACAGAAATTTGCATAGATTGAA
dm3 chr3R:429760-429991 - ATAGAAACAGAAGAGAACAAGATGGAACGATTTCATCGACTATCAGATACTCGTTACTGAGACACATC------AGATA----CTCCACAAACAGTCTAGTCCAGAGTTGATACATACAATTT-----G-----------GGTTCTT-------------ATTTTTGCCAATATCAATCGATATTTCAAGAGATTTTT-------------------------------------------------------------------------------------------------------------------------------------T--CTCTCTGGATTTTTA-ATTTCAGTTGTGATGTCGGCGCCATCTTTTCCGTTACAGAAATTTGCATAGATTGAA
droEre2 scaffold_4929:21159936-21160146 + AA--AAACAAACGAGAACACAATCG----C-TTGTTTGACTATCAGATAGCCGTTACTCAGCTAGTGGAAGTACGAAC----TA---------GAAATT----------------CCAAATTTTTCTGGCA--TATTTAGTGTTTTTTTGTACTCTGCAAATTTTTGCCAAGACCAGCGGTTGTTTTTAATAAATT-------------------------------------------------------------------CTTTAATA-----------------------ATTCTAATTATTGT--------------------TATTCGCTTTGTGAGTGATTCTCTTTTAGTT------------------------------------------------
droYak3 3L:21693671-21693784 + AAAATAAT------------------ACAAAATCCTCGACTAGCAGATACCCGTTACGCAGCTCAAGGGAGCTCATAC----CAAGCGCCAACATGCAGTTACAAAATT------ACCAAAAC-----AAATGTTTGT--GTCTGCT-------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409542:41556-41654 + TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTCAATATGTATCGATTTAGCAAAGATTTTTCA-----------------------------------------------------------------------------------------------AATCGAAACATTAT----------------------TT--CGCTATTTATGAAGATATTTATGTTATAAGGCCAGAGTGACGT------------------------------
droBia1 scf7180000301179:13735-13796 - ACAA-AACAAGGAAGAACGCTATAG-TCGAGAGCCTCGACTATCAGATACCCGTTACTCAGCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415669:9949-10095 - ATAGAAACAAGAGAGAACGCTATAG-TCGGGTGCCCCGACTATCAGATACCCGTTACTCAGACACCCGTTACTCAGCTA----ATCCGCCGTAACTTTTTAACAAATGG------TCCGATTA-----AATAATTTTT--------------------------------------TTCTACATTTCGATAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAT--------------------------------------------------A
droEle1 scf7180000490527:10089-10176 + TTCAAAACATGAAAGAGCGATATAG-TCGAGTTCCACGACTATTAGACATCCTTTACTCAGCCAAAA-AACTTCAAAC----TA---------AATATTC----------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------------------------------------
droRho1 scf7180000777615:915-1096 - A----AACAAGAGAGAACGCTATAG-TCGAGTGCCTCGACTATTAGATACCCGTTACTCAGCTAAACA------ACTTATTATA---------AATATGC----------------C-------------------------------------------------------------------TTCTTGTGTTTTTTTTGTTTTTTTTTGTTCAACATAA---------------------------------------------TGTGAATGGTTTGTGTCGCTAATATACGAACGGAAACCTCAATTTTTTTTGCAACACGCTATCG-----------------------------------------------------------------------------
droKik1 scf7180000298128:195-269 - TTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTTATTGTATATTATTATTTTTAGTTATTTTTAT-----------------------------------------------------------------------------------------------------------------------CTATTTTATTTTA--TTTTATTTATTTTTATATT------------------------------------------------------
dp5 XL_group3a:1813967-1814121 + AATT---------------------------------------------------------------------------------------------------------------TTAAATTC--------TATTGAT--GTTTTGA-------------ATTTTTGCTAATATTAAGCTATC-------------------------GGTGCGGGCGTGTCTTTAAATAGTCGAGCTCTGATATCTTTGTAGCTCTGACAGTCTTTGAGAATGTGTTGTG---------------------------------------------------------------------TTGACAGTTGTGATGACAGCTCCACATCTGCAG------------------------
droPer2 scaffold_3:3036628-3036677 + TTATAGTT----GCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTCGTCGCCATCGCT-------CAGAAATTTACATAAGTGGAA
droWil2 scf2_1100000004002:5330-5411 + ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAATATTTCAAGTGGTTTTTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----ATCTTCGGCTAC--------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGAAACGGAAGAGAACAAGATAGAACGATTTCATCGACTATCAGATACCCGTTACTCAGATACATC------AGATA----CTCCACACGCAGTCTATCCCAGAATT------TCCAATTC-----GAATATGTTT--GGTTTTT-------------ATTTTCGCCAATATGAATCGATATTTCAAGTGATTTTTAG-----------------------------------------------------------------------------------------------------------------------AGACTTTATCGTT--CTCTCTGGATTTTTATATTTCAGTTGTGATGTCGGCGCCACATCTTCAGCTACAGAAATTTGCATAGATTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................TTTTTATATTTCAGT.................................................1530.33100000010000000000
...............................TTCATCGACTATCAGATACC....................................................................................................................................................................................................................................................................................................................................................................2040.25101000000000000000
..........................................TCAGATACCCGTTACTCAGAT........................................................................................................................................................................................................................................................................................................................................................21160.06100000010000000000
.....................................GACTATCAGATACCCGTTA...............................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
droSec2
ACAGAAACAGAAGAGAACAAGATAGAACGATTTCATCGACTATCAGATACCCGTTACTCAGATACATC------AGATA----CTCCACACGCAGTCTAGCCCAGAATT------TCCAATTC-----GAATATTTTT--GGTTTTT-------------ATTTTCGCCAATATGAATCGATATTTCATGTGATTTTTAG-----------------------------------------------------------------------------------------------------------------------AGACTTTATCGTT--CTCTCTGGATTTTTATATTTCAGTTGTGATGTCGGCGCCACATCTTCAGCTACAGAAATTTGCATAGATTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
ATAGAAACAGAAGAGAACAAGATGGAACGATTTCATCGACTATCAGATACTCGTTACTGAGACACATC------AGATA----CTCCACAAACAGTCTAGTCCAGAGTTGATACATACAATTT-----G-----------GGTTCTT-------------ATTTTTGCCAATATCAATCGATATTTCAAGAGATTTTT-------------------------------------------------------------------------------------------------------------------------------------T--CTCTCTGGATTTTTA-ATTTCAGTTGTGATGTCGGCGCCATCTTTTCCGTTACAGAAATTTGCATAGATTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................ATCGACTATCAGATACTCGTTA...............................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TTTTA-ATTTCAGTTGTGATGT.........................................2112.0020000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TACATACAATTT-----G-----------GGTTCTT-------------ATTTT..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TCTT-------------ATTTTTGCCAATATCAATCGATA................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAACGATTTCATCGACTATCAGATACTCGT.................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTTTTA-ATTTCAGTTGTGATGTCGGC.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTA-ATTTCAGTTGTGATGTCGGCGCCA.................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGAAACAGAAGAGAACAAGATGGAAC...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TCTTTTCCGTTACAGAAATTTGCATAGA.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TTCTT-------------ATTTTTGCCAATATCAATCGATA................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CATACAATTT-----G-----------GGTTCTT-------------ATTTTTGCCAA............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TGCCAATATCAATCGATT................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................TCGACTATCAGATACTCGTTA...............................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................TGCCAATATCAATCGAAC................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
....................................CGACTATCAGATACTCGTTACT.............................................................................................................................................................................................................................................................................................................................................................22140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AA--AAACAAACGAGAACACAATCG----C-TTGTTTGACTATCAGATAGCCGTTACTCAGCTAGTGGAAGTACGAAC----TA---------GAAATT----------------CCAAATTTTTCTGGCA--TATTTAGTGTTTTTTTGTACTCTGCAAATTTTTGCCAAGACCAGCGGTTGTTTTTAATAAATT-------------------------------------------------------------------CTTTAATA-----------------------ATTCTAATTATTGT--------------------TATTCGCTTTGTGAGTGATTCTCTTTTAGTT------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AAAATAAT------------------ACAAAATCCTCGACTAGCAGATACCCGTTACGCAGCTCAAGGGAGCTCATAC----CAAGCGCCAACATGCAGTTACAAAATT------ACCAAAAC-----AAATGTTTGT--GTCTGCT-------------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TATT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTCAATATGTATCGATTTAGCAAAGATTTTTCA-----------------------------------------------------------------------------------------------AATCGAAACATTAT----------------------TT--CGCTATTTATGAAGATATTTATGTTATAAGGCCAGAGTGACGT------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACAA-AACAAGGAAGAACGCTATAG-TCGAGAGCCTCGACTATCAGATACCCGTTACTCAGCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATAGAAACAAGAGAGAACGCTATAG-TCGGGTGCCCCGACTATCAGATACCCGTTACTCAGACACCCGTTACTCAGCTA----ATCCGCCGTAACTTTTTAACAAATGG------TCCGATTA-----AATAATTTTT--------------------------------------TTCTACATTTCGATAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAT--------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
TTCAAAACATGAAAGAGCGATATAG-TCGAGTTCCACGACTATTAGACATCCTTTACTCAGCCAAAA-AACTTCAAAC----TA---------AATATTC----------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A----AACAAGAGAGAACGCTATAG-TCGAGTGCCTCGACTATTAGATACCCGTTACTCAGCTAAACA------ACTTATTATA---------AATATGC----------------C-------------------------------------------------------------------TTCTTGTGTTTTTTTTGTTTTTTTTTGTTCAACATAA---------------------------------------------TGTGAATGGTTTGTGTCGCTAATATACGAACGGAAACCTCAATTTTTTTTGCAACACGCTATCG-----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTTATTGTATATTATTATTTTTAGTTATTTTTAT-----------------------------------------------------------------------------------------------------------------------CTATTTTATTTTA--TTTTATTTATTTTTATATT------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AATT---------------------------------------------------------------------------------------------------------------TTAAATTC--------TATTGAT--GTTTTGA-------------ATTTTTGCTAATATTAAGCTATC-------------------------GGTGCGGGCGTGTCTTTAAATAGTCGAGCTCTGATATCTTTGTAGCTCTGACAGTCTTTGAGAATGTGTTGTG---------------------------------------------------------------------TTGACAGTTGTGATGACAGCTCCACATCTGCAG------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................TAGTCGAGCTCTGATATCTTTGTAG..........................................................................................................................................................2514.0040000000040
....................................................................................................................................................................................................................................TAGTCGAGCTCTGATATCTTTGTAGCTC.......................................................................................................................................................2811.0010000000010
..........................................................................................................................................................................................................................................................................TGAGAATGTGTTGTG---------------------------------------------------------------------TTGACAGTTG...............................................2511.0010000000010
droPer2
TTATAGTT----GCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTCGTCGCCATCGCT-------CAGAAATTTACATAAGTGGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAATATTTCAAGTGGTTTTTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----ATCTTCGGCTAC--------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGGC.......................252010.4020808021260
.................................................................................................................................................................................................................................................................................................................................................................TTAATTTTGGTATTAAG-----ATCTTCGGC.......................26201.15230130100
..............................................................................................................................................................................................TGGTTTTTATGAACTATCCTGCCTGACC.............................................................................................................................................................................................28200.7515015000
...................................................................................................................................................................................................................................................................................................................................................................AATTTTGGTATTAAG-----ATCTTCGGC.......................24200.6513012010
.....................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATTAAG-----ATCTTCGGCTAC--------------------25200.501005140
................................................................................................................................................................................................................................................................................................................................................................TTTAATTTTGGTATTAAG-----ATCTTCGGC.......................27200.45900090
............................................................................................................................................................................................................TATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTT...............................................26200.35707000
...................................................................................................................................................................................................TTTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------........................................................26200.35707000
.................................................................................................................................................................................................................TGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGG............................................24200.35707000
............................................................................................................................................................................................................TATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATT................................................25200.35707000
.......................................................................................................................................................................................................TGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTT.....................................................25200.35706010
.................................................................................................................................................................................TCAATATTTCAAGTGGTTTTTATGAAC...........................................................................................................................................................................................................27200.30603030
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGG........................24200.25503020
..................................................................................................................................................................................................TTTTATGAACTATCCTGCCTGACC.............................................................................................................................................................................................24200.25505000
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGGCT......................26200.20401030
.........................................................................................................................................................................................................AACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATT................................................28200.20404000
..............................................................................................................................................................................................................TCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGG............................................27200.20404000
...T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAATATTTCAAGTGGTTTTTA................................................................................................................................................................................................................26200.20401030
.........................................................................................................................................................................................................AACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTT.....................................................23200.20404000
.TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAATATTTCAAGTGGTT....................................................................................................................................................................................................................24200.20400040
.....................................................................................................................................................................................................................TGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----A...............................28200.20404000
...................................................................................................................................................................................................TTTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TT......................................................28200.15303000
...............................................................................................................................................................................TATCAATATTTCAAGTGGTTTTTATGAAC...........................................................................................................................................................................................................29200.15303000
.................................................................................................................................................................................................................................................................................................................................................................TTAATTTTGGTATTAAG-----ATCTTCGG........................25200.15300030
.....................................................................................................................................................................................................TATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------T.......................................................25200.15302010
.....................................................................................................................................................................................................TATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTT....................................................28200.15302010
...................................................................................................................................................................................................TTTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------T.......................................................27200.15302010
.....................................................................................................................................................................................TATTTCAAGTGGTTTTTATGAACTATCC......................................................................................................................................................................................................28200.15303000
................................................................................................................................................................................ATCAATATTTCAAGTGGTTTTTATGAAC...........................................................................................................................................................................................................28200.15303000
......................................................................................................................................................................................................................................................................................................................................................................TTTGGTATTAAG-----ATCTTCGGCTAC--------------------24200.15300030
...............................................................................................................................................................................................................................................................................................................................................................TTTTAATTTTGGTATTAAG-----ATCTTCGGC.......................28200.15302010
.............................................................................................................................................................................................................ATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGG............................................28190.11202000
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGGCTAC--------------------28200.10202000
...................................................................................................................................................................................................................................................................................................................................................................AATTTTGGTATTAAG-----ATCTTCGGCT......................25200.10200110
...............................................................................................................................................................................TATCAATATTTCAAGTGGTTTTTATG..............................................................................................................................................................................................................26200.10200020
.........................................................................................................................................................................................TCAAGTGGTTTTTATGAACTATCCTGCC..................................................................................................................................................................................................28200.10202000
........................................................................................................................................................................................................GAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------........................................................21200.10202000
..................................................................................................................................................................................................TTTTATGAACTATCCTGCCTGACCT............................................................................................................................................................................................25200.10220000
...............................................................................................................................................................................TATCAATATTTCAAGTGGTTTTTAT...............................................................................................................................................................................................................25200.10201010
.................................................................................................................................................................................................................TGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTA..........................................26200.10202000
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGGCTA.....................27200.10202000
...............................................................................................................................................................................................GGTTTTTATGAACTATCCTGCCTGACC.............................................................................................................................................................................................27200.10202000
.........................................................................................................................................................................................................AACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAAT.................................................27200.10202000
......................................................................................................................................................................................................ATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTT.....................................................26200.10202000
..................................................................................................................................................................................................TTTTATGAACTATCCTGCCTGACCTG...........................................................................................................................................................................................26200.10202000
....................................................................................................................................................................................................TTATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------T.......................................................26200.10202000
...............................................................................................................................................................................TATCAATATTTCAAGTGGTTTTTA................................................................................................................................................................................................................24200.10202000
........................................................................................................................................................................................................GAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAAT.................................................28160.06101000
............................................................................................................................................................................................................TATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAAT.................................................24200.05101000
.........................................................................................................................................................................................TCAAGTGGTTTTTATGAACTATCC......................................................................................................................................................................................................24200.05101000
..............................................................................................................................................................................................TGGTTTTTATGAACTATCCTGCCT.................................................................................................................................................................................................24200.05101000
......................................................................................................................................................................................................................GACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----ATC.............................29200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATTAAG-----ATCTTCGGC.......................22200.05101000
..................................................................................................................................................................................................................................................................................................................................................................TAATTTTGGTATTAAG-----ATCTTCGGCC......................26200.05101000
.....................................................................................................................................................................................................................TGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----................................27200.05101000
..........................................................................................................................................................................................................ACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATT................................................27200.05101000
...............................................................................................................................................................................TATCAATATTTCAAGTGGTTT...................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................................................................TTTCAAGTGGTTTTTATG..............................................................................................................................................................................................................18200.05101000
.................................................................................................................................................................................................TTTTTATGAACTATCCTGCCTGACC.............................................................................................................................................................................................25200.05101000
.........................................................................................................................................................................................TCAAGTGGTTTTTATGAACTATCCTG....................................................................................................................................................................................................26200.05101000
..............................................................................................................................................................................................TGGTTTTTATGAACTATCCTGCCTGAC..............................................................................................................................................................................................27200.05101000
......................................................................................................................................................................................ATTTCAAGTGGTTTTTATGAACTATCC......................................................................................................................................................................................................27200.05101000
.................................................................................................................................................................................TCAATATTTCAAGTGGTTTTTATGAACTA.........................................................................................................................................................................................................29200.05101000
.....................................................................................................................................................................................................TATGAACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------........................................................24200.05100010
.....................................................................................................................................................................................................................TGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAA......................................26200.05101000
...............................................................................................................................................................................................................CCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGG............................................26200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................TTGGTATTAAG-----ATCTTCGGCTAC--------------------23200.05100010
......................................................................................................................................................................................................................GACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----AT..............................28200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................TATTAAG-----ATCTTCGGCTA.....................18200.05100010
............................................................................................................................................................................................................TATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTG.............................................28200.05101000
...............................................................................................................................................................................................................CCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTG.............................................25200.05101000
....................................................................................................................................................................................................TTATGAACTATCCTGCCTGACCTT...........................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................ACTATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAAT.................................................26200.05101000
..................................................................................................................................................................................................................GCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTA..........................................25200.05101000
.............................................................................................................................................................................................................ATCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTT...............................................25200.05101000
..............................................................................................................................................................................................................TCCTGCCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAAT.................................................22200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATTAAG-----ATCTTCGG........................21200.05101000
........................................................................................................................................................................................................................................................................................................................................................................TGGTATTAAG-----ATCTTCGGCT......................20200.05100010
......................................................................................................................................................................................................................GACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTATTAAG-----A...............................27200.05101000
...................................................................................................................................................................................................................CCTGACCTGG----------------------------------------------------------------------------------------------------------------------------------TTTTAATTTTGGTAT.........................................25200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................TTGGTATTAAG-----ATCTTCGGCTCA--------------------23200.05101000

Generated: 05/19/2015 at 05:28 AM