ID:

dsi_7552

 Coordinate:

3l:1704979-1705128 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.0 -31.0 -30.9 -30.9

Flybase annnotation

five_prime_UTR [3l_1705129_1705249_-]; exon [3l_1705129_1705250_-]; five_prime_UTR [3l_1705129_1705250_-]; exon [3l_1705129_1705249_-]; intron [3l_1703448_1705128_-]; intron [3l_1699017_1705128_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATAGTTAAATTAACAAATTTACTGTGAACAATTAGATTGTCATCTGAGTGTAAGTTTCTCCTTCGATTTCGTCCGTAGCTCACTTTTAGTTGGGTTCAAAATGCAATTAAAATTCGGTGTGCGTGCAAAGTGAAAATTTTTCGGGTCAACGCCACACCCTCGAAGGCAACACAAAAATCCAATTAACGGGGCTAAAGTGAGAGAAAAGTCTTGGCCATAACTGAAAAGCTATGCCGTGCAATGCCAGTG
**************************************************.((.......................(((((..((.(((((((((((.....(((...........(((((((((......((((.....)))).....)))).))))).......))).......))))))))))).)))))))...))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
............................ACAATTAGATTGTCATCTGAGT........................................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................AATTAGATTGTCATCTGA.......................................................................................................................................................................................................... 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..........................GAACAATTAGATTGTCATCT............................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................ATTAGATTGTCATCTGAG......................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TAACGGGGCTAAAGTGA................................................. 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................TACTGTAAACAATTTGAGTGTCA............................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................ATTTACTGTGAAGAATTAGATTGG................................................................................................................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................ACTGTGAACTATTAGATTGTCATCTGA.......................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................ATTTACTGTGAACAATTAGATTGTCA............................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................CTCCTTCGATTTCGTCCGTAGCT......................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................AACAATTAGATTGTCATCTGAGTG....................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................GTGAACAATTAGATTGTCATCTGA.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........TAACAAATTTACTGTGAAC............................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................GAACAATTAGATTGTCATCTGA.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................AATTAGATTGTCATCTGG.......................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............AACAAATTTACTGTGAACAA.......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...................TTACTGTGAACAATTAGATTGTCG............................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................ACTGTGAACAATTAGATTGTCATCTGA.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................TAACGGGGCTCAAGTG.................................................. 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
........................................................TTCTACTTCGATTTCGTC................................................................................................................................................................................ 18 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................AACGGGGCTCAAGTGA................................................. 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
............................................................ACCTCGATTTCGTCAGTAGC.......................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0
......................................................................................TTAGTTGGGTTCAGAA.................................................................................................................................................... 16 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0
.....................................................................TCGTCCGTAGCTCAATTGGA................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1
....................TACTGTGAAAAATTAGAG.................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................CTAAAGTGAGACAAGAG......................................... 17 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................TATCGGGGCTCAAGTGA................................................. 17 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................TTTAACGGGGCTAAAGC................................................... 17 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................CAGAGTGTTAATTTTTCGGG........................................................................................................ 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0
................................................................CGATTCCGTCCCTAGC.......................................................................................................................................................................... 16 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0
..............CAATATTACTGTGAACAA.......................................................................................................................................................................................................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................ATTAACGGGACTTAAGT................................................... 17 2 18 0.06 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................TAGGGTCAACGCTAC.............................................................................................. 15 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................AATTAACGCGGCTAA...................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................GCATCCGTAGCTCACT..................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...............................................................TCGATTCCGTCAGTAG........................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................TTCGGTGTGCGTGTA.......................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
................................................................CGATTCCGTCAGTAGC.......................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TTATCAATTTAATTGTTTAAATGACACTTGTTAATCTAACAGTAGACTCACATTCAAAGAGGAAGCTAAAGCAGGCATCGAGTGAAAATCAACCCAAGTTTTACGTTAATTTTAAGCCACACGCACGTTTCACTTTTAAAAAGCCCAGTTGCGGTGTGGGAGCTTCCGTTGTGTTTTTAGGTTAATTGCCCCGATTTCACTCTCTTTTCAGAACCGGTATTGACTTTTCGATACGGCACGTTACGGTCAC
**************************************************.((.......................(((((..((.(((((((((((.....(((...........(((((((((......((((.....)))).....)))).))))).......))).......))))))))))).)))))))...))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
....................................................................................................................................................................TCCGTTGTGTTTTTAGGTTAA................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................CTAAAGCAGGCATCGAGTGAA.................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................AAGCCACAAGCGCGTTTCACG.................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................CTGTGTTTTTAGGTGAATTG.............................................................. 20 2 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................CAAAGCCCAGATGCGGT............................................................................................... 17 2 9 0.11 1 1 0 0 0 0 0
.......................................................................................................................................TTAAATAGCCCAGTT.................................................................................................... 15 1 10 0.10 1 0 0 0 0 1 0
....................................................................................................................................CTGTTAAAAAGCCCAGTG.................................................................................................... 18 2 10 0.10 1 0 0 0 1 0 0
.................................................................................................................................................CAGTTGCAGGATGGGAGC....................................................................................... 18 3 20 0.10 2 0 2 0 0 0 0
...........................................................................................................................................AAAGCCCAGTGGAAGTGTG............................................................................................ 19 3 16 0.06 1 0 0 0 1 0 0
.......................................................AAAGATGAAGCTGAAGCAGT............................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 0 0 1
.........................................................................................................TTAATTTTAAGTCACA................................................................................................................................. 16 1 18 0.06 1 0 0 0 1 0 0
............................................................................................................................................AAGCCCACTTGCGTTG.............................................................................................. 16 2 20 0.05 1 1 0 0 0 0 0
.............................................................GAAGCTCAAGAAGGCAT............................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0
........TTAATTGTTTGAATGA.................................................................................................................................................................................................................................. 16 1 20 0.05 1 0 0 0 1 0 0
.............................................................................................CCAAGTTTTAGGTTA.............................................................................................................................................. 15 1 20 0.05 1 1 0 0 0 0 0
..................................................................TAAAGCAGCCATAGAGCGA..................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:1704929-1705178 - dsi_7552 AATAGTTA------AATTAACAAATTT-ACTGTGAACAATTAGA-TTGTCATCTGAGTGTAAGTTTCTCCTTCGATTTCGTCCGTAGCTCACTTTTAGTTGGGTTC-AAAATGCAATTAAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATGCCGTGCAATGC---CA-GTG
droSec2 scaffold_2:1821198-1821447 - AATAGTTA------AATTAACAAATTT-ACTGTGAACAATTAGA-TTGTCATCAGAGTGTAAGTTTCTCCTTCGTTTTCGTCCGTAGCTCACTGTTAGTTGGGTTC-AAAATGCAATTAAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGTC-ATAACTGAAAAGCTGTGCCGTGCAATGC---CA-GTG
dm3 chr3L:1794999-1795248 - AATAGTTA------AATTAACAAAGTA-ACTGTGAACAAATAGA-TTGCCATCAAAGTGTAAGTTTCTACATAGTTTTCGTCCGTAGCTCACTGTTAGTTGGGTTC-AAAATGCAATTGAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATGCTGTGCAATGT---CA-CTG
droEre2 scaffold_4784:1779707-1779956 - AATAGTTA------AATTAACAAATTC-ATTGTGAACAATTAGA-TTGTCATCAAAGTGTAAGTTTTCCAATCGTTTTCGTCCGTAGCTCATTGTTAGTTGGGTTC-AAAATGCAATTGAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------TAAAAATCCAATTAA-CGG-GG---------CAAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATAAGGTTCAATGC---TA-GTG
droYak3 3L:1747276-1747525 - AATAGTTA------AATTAACAAATTA-ACTGTGAACAATTAGA-TTGCCATCAAAGTGTAAGTTTTCCAATCGTTTTCGTCCGTAGCTCACTATTAGTTGGGTTC-AAAATGCAATTGGAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------CAAAAATCCAATTAA-CGT-TG---------CAAAAG---TGAGAGAAAAGTCTTCGGC-AAAACTAAAAACCTATAAGGTGAAATGC---CA-GTG
droEug1 scf7180000407756:118049-118299 - AATAATTA------AATTACCAAATTA-ACTGTGAAAGATTATATTTGCCATCAAAGTGTAAGTTCATTAAAAATTTTCGTTCGTTGCTTTCTGTTATGTGGGTTC-GAATTGCAATTGAAATTCGGTTTGCGT----G-----------TAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TAGG-CG----------ACT-------------------------TAAAAATCCAATTAAACAG-CG---------TAAAAG---TGGGGAAATATTCTTGGCC-ATAACTAAAAA-CTAAAAGGTTCAATGC---CA-GCG
droBia1 scf7180000302428:8491451-8491700 - AATAGTTT------AATTAATAAATTA-ACAGTGAACGATCACGTTTACCATCAAAGTGTAAGTTGCTTAACTGGTTTCGCCCGTAGCTAACTG-TAGTTGGGTCC-AAATTGCACTTGAAATTCGGCTTGCGT----G-----------TGAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACT-------------------------C-AAAATCCAATTAAACAG-GG---------TAAAAG---TGAGAGAAAAGTCTTGGCC-GCGACTGAAAATCGAGAAGGTCCAATGC---CA-GTG
droTak1 scf7180000415229:354529-354779 + AATAGTTT------AATTAACAAATTA-ACTGTAAACGGATACGTTTTCCATCAAAGTGTAAGTTGCTCTATGATTTTCGCACGTAGCTTACCGTTAGTTGGGTTC-AAATTGCAATTGAAATTCGGTTTGCGT----G-----------TAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------CAAAAATCCAATTAAACAG-GC---------TAAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAATCGA-GAGGTCCAATGC---CA-GTG
droEle1 scf7180000491249:3751479-3751731 + AATAGTTT------AATTAACAAATTA-ACTGTCAACCATTCGATTTGCCTTCAGAGTGTAAGTTGCTACAACTATTTCGACCGTACAATTATGTTAATTGGGTTA-AAAATGCAATTGAAATTCGGTTTGCGT----G-----------TGAAGTGAAAATT------------TTCGGGTCAACGCCACACCCTCA-CAGG-CG----------ACA-------------------------CAAAAATCCAATTAAAC--------ATGGG-TAAAAG---TGAGAGAAAAGTTTTGGCCTATAGTTCAAAAGGCAGAAAGACCAATGC---CA-GTG
droRho1 scf7180000776850:133014-133266 + AATAGTTT------AATTAACAAATTA-ACCGTGAACTATTAGATTTGCCATCAAAGTGTAAGTTCCCGTTACTTATTTGCCCGTTTCCTAATGTTAGGTGGGTTC-AAATTGCAATTGAAATTCGGTTTGCGT----G-----------TGAAGTGAAAATT------------TTCGGATCAACGCCACACCCTCA-CAGG-CG----------ACA-------------------------TGAAAACCCAATTAAAC--------ATGGG-TAAAAG---TGAGAGAAAAGTCTTGGCCCATAATTCAAAAGGCAGAAAGTCCAATGC---CA-GTG
droFic1 scf7180000454113:278159-278411 + ATTAGTTT------GATTAACAAATTA-ACTGTAAACCATTTAATTCGCCATCAGAGTGTAAGTTTTTTTAAACCTTTTCTTCTTTTTTCTGTGAAAGTTGACTTT-AAATTGCAATTGAAATTCGGCTTGCGT----G-----------TGAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTTG-CAGG-AG----------ACA-------------------------CAAAAATCCAATTAAAA--------GCGTC-TTAAAG---TGTGAGAAAACTCTTGGCC-ATGGTTCAGGGGGCAAAGGAACCCAAAC---CA-GTG
droKik1 scf7180000302577:283700-283953 - AATAGCAT------AATTAACAAATTA-ACTGTGAAGCAATAGAGTTGCCGTCAAAGTGTAAGTTTGCACCAAATTTCCACCCGTAGCCTACTGATAGTTGGGTTC-AAAATGCAATTGAAATTTGGTTTGCGT----G-----------TGAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCTCAGGG-CG----------TCG-------------------------TAAAAATCCAATTAAAC--------ATGG--AAAGTG---CGAGAGCAGAGTCTTGACC-ATTGCTCAAAAAGCCGAACGGCCAGCGC---CG-GTG
droAna3 scaffold_13337:1042682-1042932 + AATAGTAT------AATTTACAAATTA-ACTGTGAATCGATAGAGTTGCCATCAAAGTGTAAGTTTTCAATCATTTTTTCCCTGTAGCCTACTGTTAGTTGGGTTT-AAATTGCAATTGAAATTCAGCGTGCGT-----------------GAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCTCCGGG-CG----------ACT-------------------------TTGGAATCCAATTAAGC--------CCG-----GAAGTGGGGAAAG-AAAGTCCCGCCC-GC-ACTCAAACTGC--ATTTTTCTCTGCCTACA-GAG
droBip1 scf7180000396371:1373467-1373718 + AATAGTAT------AATTTATAAATTA-TCTGTGAATCGATAGAGTTGCCATCAAAGTGTAAGTTTTCAATAATTTTATCCCTGTAGCCTACTGTTAGTTGGGTTT-AAATTGCAATTGAAATTCGGCGTGCGT-----------------GAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCAGCGGG-CG----------ACT-------------------------TTGGAATCCAATTAAGC--------CTG-----GAAGTTGCGAAAG-AAAGTCTTGGCC-GCAACTCAAAATGCG--TACTTCTCTGCCTACA-GAG
dp5 XR_group8:537820-538076 - AGTAATTG------TATTAATGAAACA-ACTGTGAAACATTACATTAGATATCAAAGTGTAAGTTTTCATTAATTTTATAATGGTAGCACATGAATTTATAGCTAT-AAGTTGCAATTTAAAGTTTTTTAGTGA----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCTCATAG-AG----------ACA------------------------GTCTAAATCCAATTAAAC--------ATGGGGAAAATT---TGAGCGAAAAGTGCTAAAA-ATTATTAAATAGATGAATGGGGCAATAC---CGGGAG
droPer2 scaffold_32:943663-943919 + AGTAATTG------TATTAATGAAACA-ACTGTGAAACATTACATTAGATATCAAAGTGTAAGTTTTCATTAATTTTATAATGGTAGCACATGAATTTATAGCTAT-AAGTTGCAATTTCAACTTTTTTAGTGA----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCTCATAG-AG----------ACA------------------------GTCTAAATCCAATTAAAC--------ATGGGGAAAATT---TGAGCGAAAAGTGCTAAAA-ATTATTAAATAGATCAATGGGACAATAC---CGGGAG
droWil2 scf2_1100000004540:1227908-1228160 + AGTAGTTTTAAATTAATTGACAAATTTGGTTGCGCAGCGTTTGAATAATAACTAAATTGTAAGTTGTATAGAAATTTGCATCGTTTGCTGT-GTTTATATAGCTTT-AAAATAAG-TTTAAATTTTG-----------------------------------T-----------TTTCGGGTCAA-ACCACACCCTCG-ATAG-AC----------ACATACATACACAAATGTATACATGAAAAGAAAATCCAATTAA-CGCACT---------TAAATG---TTTGTGGAAATACTTACTT-ATGTGT--------ATTAGAAACTATTT---CT-CTT
droVir3 scaffold_10322:69987-70227 + AAAAGTTA------AACCAACAAATTT-GTTGTAAAGCGATTGAGCGAGATCTAAAGTGTAAGTTACATA-TTGTTTTCATTTACAATTGTAGACCACAAAGCTTT-AAATTACA-TTGAAAATCAGCAAGCGTTTATGTGTGTGT--GGTACAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TTTT-CA----------AAA-----------------------GGCGAAAATCTAATTATGC--------TT---------------------------TAGAA-ATTGGCAAAATGTCACAAAGTGATTTGC---T---TA
droMoj3 scaffold_6680:2128216-2128442 + AATAGTTA------AACCAACAAATTTCTTTGTAAAGCGGTTGAGCAAGGTCCAAAGTGTAAGTTACACATAGTTTTATTTGCACAATTATCGACCACATAGCTTT-AAATTGCATTTGAAAATCGGCTTGCGT----GTGTGTGTGTA--GTAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TTTT-TA----------TAT-----------------------CGAGAAAATCTAATTATGC--------TT----TCAATG---TG------------------------------------TGCACAATGC---CA-CTA
droGri2 scaffold_15110:429814-430092 - AATAGTTA------AACCAACAGATTT-TATGTGAAGCGGTTGAGAAATATTTAAAGTGTAAGTTGTATTAAGTTTTCTATCTGAAACT-ATTGACAGCATGGCTAAAACTTATGCTTGAAAATCGA---GCGAATTTGTGTGTGTGTA--TAATTGGAA-TTTTTTTCTCCATTTTCGGGTCAACGCCACACCCTTG-CTCGGAATTATATGCACACA------------------------CACAAAATCCAATTAA-TAG-TTTAAAC-------GTG---CAAATTATGGAATTTCATT-ATGATTTAATT----TTATGTGTAATG-----A-GTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATAGTTA------AATTAACAAATTT-ACTGTGAACAATTAGA-TTGTCATCTGAGTGTAAGTTTCTCCTTCGATTTCGTCCGTAGCTCACTTTTAGTTGGGTTC-AAAATGCAATTAAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATGCCGTGCAATGC---CA-GTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................ACAATTAGA-TTGTCATCTGAGT...........................................................................................................................................................................................................................................................................................2212.00202000000000000000
.....................................AATTAGA-TTGTCATCTGA.............................................................................................................................................................................................................................................................................................1812.00201100000000000000
.................................GAACAATTAGA-TTGTCATCT...............................................................................................................................................................................................................................................................................................2011.00101000000000000000
......................................ATTAGA-TTGTCATCTGAG............................................................................................................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................................................................................................................................................................TAA-CGG-GG---------CTAAAG---TGA......................................................1711.00100000001000000000
.......................ATTT-ACTGTGAACAATTAGA-TTGTCA..................................................................................................................................................................................................................................................................................................2611.00110000000000000000
..................................................................CTCCTTCGATTTCGTCCGTAGCT............................................................................................................................................................................................................................................................2311.00110000000000000000
..................................AACAATTAGA-TTGTCATCTGAGTG..........................................................................................................................................................................................................................................................................................2411.00110000000000000000
...............................GTGAACAATTAGA-TTGTCATCTGA.............................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................TAACAAATTT-ACTGTGAAC................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.................................GAACAATTAGA-TTGTCATCTGA.............................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................AATTAGA-TTGTCATCTGG.............................................................................................................................................................................................................................................................................................1811.00101000000000000000
..................AACAAATTT-ACTGTGAACAA..............................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.........................TT-ACTGTGAACAATTAGA-TTGTCG..................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............................ACTGTGAACAATTAGA-TTGTCATCTGA.............................................................................................................................................................................................................................................................................................2711.00100100000000000000
droSec2
AATAGTTA------AATTAACAAATTT-ACTGTGAACAATTAGA-TTGTCATCAGAGTGTAAGTTTCTCCTTCGTTTTCGTCCGTAGCTCACTGTTAGTTGGGTTC-AAAATGCAATTAAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGTC-ATAACTGAAAAGCTGTGCCGTGCAATGC---CA-GTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................TGGTC-ATAACTGAAAAGC........................1811.0010001
.............................................................................................................................................................................................................A----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CT................................................................2611.0010010
............................................................................................................................................................GAAAATT-----------TTTCGGGTCAACGC.........................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................CTTGGTC-ATAACTGAAAAGCTGTGCC..................2611.0010010
......................................ATTAGA-TTGTCATCAGAGTGTAAG......................................................................................................................................................................................................................................................................................2411.0010001
.......A------AATTAACAAATTT-ACTGTGAAC................................................................................................................................................................................................................................................................................................................2311.0011000
....................................CAATTAGA-TTGTCATCAGAGT...........................................................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................................................................................................GG-GG---------CTAAAG---TGAGAGAAAAGT.............................................2211.0010001
...............................GTGAACAATTAGA-TTGTC...................................................................................................................................................................................................................................................................................................1811.0010010
.....................................AATTAGA-TTGTCATCAGAGT...........................................................................................................................................................................................................................................................................................2011.0010010
.....................AAATTT-ACTGTGAACAATTAGA-TTGTC...................................................................................................................................................................................................................................................................................................2711.0010100
dm3
AATAGTTA------AATTAACAAAGTA-ACTGTGAACAAATAGA-TTGCCATCAAAGTGTAAGTTTCTACATAGTTTTCGTCCGTAGCTCACTGTTAGTTGGGTTC-AAAATGCAATTGAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CA----------ACA-------------------------CAAAAATCCAATTAA-CGG-GG---------CTAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATGCTGTGCAATGT---CA-CTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................TAA-CGG-GG---------CTAAAG---TGAT.....................................................18187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086100000000000000000000000000000000000000000
.....................................AAATAGA-TTGCCATCAAAGT...........................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATAGA-TTGCCATCAAAGTT..........................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATAGA-TTGCCATCAAAGT...........................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................ACTGTTAGTTGGGTTC-AAAATG....................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................CGGTGTGCGT----G-----------CAAAGTGAAAAT...................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TA-ACTGTGAACAAATAGA-TTGCCAT.................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTCGGTGTGCGT----G-----------CAAAGTG........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TCCGTAGCTCACTGTTAGTTG................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010
........................GTA-ACTGTGAACAAATAGA-TTGCCATCA...............................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TAGA-TTGCCATCAAAGT...........................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAGTA-ACTGTGAACAAATAGA-T.......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TTCGTCCGTAGCTCACTGTTAG...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.ATAGTTA------AATTAACAAAGT...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCTTGGCC-ATAACTGAAAAGCTATGC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................TAA-CGG-GG---------CTAAAG---TGAGAGA..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................CAATTAA-CGG-GG---------CTAAAG---TGAGAGAA.................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................ATTGAAATTCGGTGTGCGT----G-----------C..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCTTGGCC-ATAACTGAAAAGCT.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACAAAGTA-ACTGTGAACAAATAGA-TTGC....................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CGTCCGTAGCTCACTGTTAGT..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................TTTCGTCCGTAGCTCACTGTTAGTTGGG..............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................AATTGAAATTCGGTGTGCGT----G-----------C..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATAACTGAAAAGCTATGCTG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CGGTGTGCGT----G-----------CAAAGTG........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CTGAAAAGCTATGCTGTGC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GCC-ATAACTGAAAAGCTA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTGAACAAATAGA-TTGCCATCA...............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGTGAACAAATAGA-TTGCCA..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTC...................................................................................................................................................................2611.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATTAA-CGG-GG---------CTAAAG---TGA......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................TTAA-CGG-GG---------CTAAAG---TGA......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................TGCAATTGAAATTCGGTGTGC.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AGA-TTGCCATCAAAGTGT.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................TGAAATTCGGTGTGCGT----G-----------CAAAGTGAAA.....................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................TGAACAAATAGA-TTGCCATCAAAGT...........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................CGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTT....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................AAGTTTCTACATAGTTTTCGT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
AATAGTTA------AATTAACAAAGTA-AC.......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................GTGAACAAATAGA-TTGCCATCAAA.............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AATAGTTA------AATTAACAAAGTA-ACTGTGAAC................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTAACAAAGTA-ACTGTGAAC................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGTCTTGGCC-ATAACTGAAAAGCT.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................GTCCGTAGCTCACTGTTAGTTGGGT.............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGTTA------AATTAACAAAGTA-ACTGTGAACA...............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTAACAAAGTA-ACTGTGAACAAATAGA-T.......................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTA-ACTGTGAACAAATAGA-TTGCCAT.................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GTGTGCGT----G-----------CAAAGTGAAAAT...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GG-GG---------CTAAAG---TGAGAGAAAAG..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................CGGTGTGCGT----G-----------CAAAGTGA.......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................GAAATTCGGTGTGCGT----G-----------CAAA...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................TAGTTTTCGTCCGTAGCTCACT........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................AACAAATAGA-TTGCCATCA...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................A-ACTGTGAACAAATAGA-TTG.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CAAATAGA-TTGCCATCAAAGTGTAAG......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................ATAGA-TTGCCATCAAAGTGT.........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................AGTA-ACTGTGAACAAATAGT-........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTTTCTACATAGTTTTCGTCCG.................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...AGTTA------AATTAACAAAGTA-ACTGTG...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAAGTA-ACTGTGAACAAAT............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CGGTGTGCGT----G-----------CAAAGTGAAA.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................TACATAGTTTTCGTCCTC................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AATAGTTA------AATTAACAAATTC-ATTGTGAACAATTAGA-TTGTCATCAAAGTGTAAGTTTTCCAATCGTTTTCGTCCGTAGCTCATTGTTAGTTGGGTTC-AAAATGCAATTGAAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------TAAAAATCCAATTAA-CGG-GG---------CAAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAAGCTATAAGGTTCAATGC---TA-GTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................ATTGTGAACAATTAGA-TTGTCATCAAAGT...........................................................................................................................................................................................................................................................................................2914.0040000004
......................................................................................................................................................................................CAACGCCACACCCTCG-AAGG-C........................................................................................................................................2111.0011000000
.....................AAATTC-ATTGTGAACAATTAGA-T.......................................................................................................................................................................................................................................................................................................2311.0011000000
...AGTTA------AATTAACAAATTC-ATTGTGAA.................................................................................................................................................................................................................................................................................................................2611.0010000010
......................AATTC-ATTGTGAACAATTAGA-TTGTC...................................................................................................................................................................................................................................................................................................2611.0010000100
droYak3
AATAGTTA------AATTAACAAATTA-ACTGTGAACAATTAGA-TTGCCATCAAAGTGTAAGTTTTCCAATCGTTTTCGTCCGTAGCTCACTATTAGTTGGGTTC-AAAATGCAATTGGAATTCGGTGTGCGT----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------CAAAAATCCAATTAA-CGT-TG---------CAAAAG---TGAGAGAAAAGTCTTCGGC-AAAACTAAAAACCTATAAGGTGAAATGC---CA-GTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................AAATTA-ACTGTGAACAATTAGA-TTGC....................................................................................................................................................................................................................................................................................................2611.00100100000000
.....................................................................................................................................................................................................................................................................................AAAG---TGAGAGAAAAGTCTTCGGC-.....................................2311.00100000010000
.......A------AATTAACAAATTA-ACTG.....................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
AATAATTA------AATTACCAAATTA-ACTGTGAAAGATTATATTTGCCATCAAAGTGTAAGTTCATTAAAAATTTTCGTTCGTTGCTTTCTGTTATGTGGGTTC-GAATTGCAATTGAAATTCGGTTTGCGT----G-----------TAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TAGG-CG----------ACT-------------------------TAAAAATCCAATTAAACAG-CG---------TAAAAG---TGGGGAAATATTCTTGGCC-ATAACTAAAAA-CTAAAAGGTTCAATGC---CA-GCGSizeHit CountTotal NormTotal
No Reads
droBia1
AATAGTTT------AATTAATAAATTA-ACAGTGAACGATCACGTTTACCATCAAAGTGTAAGTTGCTTAACTGGTTTCGCCCGTAGCTAACTG-TAGTTGGGTCC-AAATTGCACTTGAAATTCGGCTTGCGT----G-----------TGAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACT-------------------------C-AAAATCCAATTAAACAG-GG---------TAAAAG---TGAGAGAAAAGTCTTGGCC-GCGACTGAAAATCGAGAAGGTCCAATGC---CA-GTGSizeHit CountTotal NormTotal
No Reads
droTak1
AATAGTTT------AATTAACAAATTA-ACTGTAAACGGATACGTTTTCCATCAAAGTGTAAGTTGCTCTATGATTTTCGCACGTAGCTTACCGTTAGTTGGGTTC-AAATTGCAATTGAAATTCGGTTTGCGT----G-----------TAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-AAGG-CG----------ACA-------------------------CAAAAATCCAATTAAACAG-GC---------TAAAAG---TGAGAGAAAAGTCTTGGCC-ATAACTGAAAATCGA-GAGGTCCAATGC---CA-GTGSizeHit CountTotal NormTotal
No Reads
droEle1
AATAGTTT------AATTAACAAATTA-ACTGTCAACCATTCGATTTGCCTTCAGAGTGTAAGTTGCTACAACTATTTCGACCGTACAATTATGTTAATTGGGTTA-AAAATGCAATTGAAATTCGGTTTGCGT----G-----------TGAAGTGAAAATT------------TTCGGGTCAACGCCACACCCTCA-CAGG-CG----------ACA-------------------------CAAAAATCCAATTAAAC--------ATGGG-TAAAAG---TGAGAGAAAAGTTTTGGCCTATAGTTCAAAAGGCAGAAAGACCAATGC---CA-GTGSizeHit CountTotal NormTotal
No Reads
droRho1
AATAGTTT------AATTAACAAATTA-ACCGTGAACTATTAGATTTGCCATCAAAGTGTAAGTTCCCGTTACTTATTTGCCCGTTTCCTAATGTTAGGTGGGTTC-AAATTGCAATTGAAATTCGGTTTGCGT----G-----------TGAAGTGAAAATT------------TTCGGATCAACGCCACACCCTCA-CAGG-CG----------ACA-------------------------TGAAAACCCAATTAAAC--------ATGGG-TAAAAG---TGAGAGAAAAGTCTTGGCCCATAATTCAAAAGGCAGAAAGTCCAATGC---CA-GTGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTAGTTT------GATTAACAAATTA-ACTGTAAACCATTTAATTCGCCATCAGAGTGTAAGTTTTTTTAAACCTTTTCTTCTTTTTTCTGTGAAAGTTGACTTT-AAATTGCAATTGAAATTCGGCTTGCGT----G-----------TGAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTTG-CAGG-AG----------ACA-------------------------CAAAAATCCAATTAAAA--------GCGTC-TTAAAG---TGTGAGAAAACTCTTGGCC-ATGGTTCAGGGGGCAAAGGAACCCAAAC---CA-GTGSizeHit CountTotal NormTotal
No Reads
droKik1
AATAGCAT------AATTAACAAATTA-ACTGTGAAGCAATAGAGTTGCCGTCAAAGTGTAAGTTTGCACCAAATTTCCACCCGTAGCCTACTGATAGTTGGGTTC-AAAATGCAATTGAAATTTGGTTTGCGT----G-----------TGAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCTCAGGG-CG----------TCG-------------------------TAAAAATCCAATTAAAC--------ATGG--AAAGTG---CGAGAGCAGAGTCTTGACC-ATTGCTCAAAAAGCCGAACGGCCAGCGC---CG-GTGSizeHit CountTotal NormTotal
No Reads
droAna3
AATAGTAT------AATTTACAAATTA-ACTGTGAATCGATAGAGTTGCCATCAAAGTGTAAGTTTTCAATCATTTTTTCCCTGTAGCCTACTGTTAGTTGGGTTT-AAATTGCAATTGAAATTCAGCGTGCGT-----------------GAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCTCCGGG-CG----------ACT-------------------------TTGGAATCCAATTAAGC--------CCG-----GAAGTGGGGAAAG-AAAGTCCCGCCC-GC-ACTCAAACTGC--ATTTTTCTCTGCCTACA-GAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................A-ACTGTGAATCGATAGAGTTGCCATC................................................................................................................................................................................................................................................................................................2611.001010000
.............................................................................................................................................................................................................................................................................................GAAAG-AAAGTCCCGCCC-GC-..................................1911.001010000
.....................................................................................................................................................................................................................................................TGGAATCCAATTAAGC--------CCG-----GAAGTGGG........................................................2711.001000010
........................................................................ATTTTTTCCCTGTAGCCTACT........................................................................................................................................................................................................................................................2111.001010000
................................TGAATCGATAGAGTTGCC...................................................................................................................................................................................................................................................................................................1811.001010000
...................................ATCGATAGAGTTGCCATCAAAGTT..........................................................................................................................................................................................................................................................................................2411.001010000
droBip1
AATAGTAT------AATTTATAAATTA-TCTGTGAATCGATAGAGTTGCCATCAAAGTGTAAGTTTTCAATAATTTTATCCCTGTAGCCTACTGTTAGTTGGGTTT-AAATTGCAATTGAAATTCGGCGTGCGT-----------------GAAGTGAAAATTT----------TTTCGGGTCAACGCCACACCCTCAGCGGG-CG----------ACT-------------------------TTGGAATCCAATTAAGC--------CTG-----GAAGTTGCGAAAG-AAAGTCTTGGCC-GCAACTCAAAATGCG--TACTTCTCTGCCTACA-GAGSizeHit CountTotal NormTotal
No Reads
dp5
AGTAATTG------TATTAATGAAACA-ACTGTGAAACATTACATTAGATATCAAAGTGTAAGTTTTCATTAATTTTATAATGGTAGCACATGAATTTATAGCTAT-AAGTTGCAATTTAAAGTTTTTTAGTGA----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCTCATAG-AG----------ACA------------------------GTCTAAATCCAATTAAAC--------ATGGGGAAAATT---TGAGCGAAAAGTGCTAAAA-ATTATTAAATAGATGAATGGGGCAATAC---CGGGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......G------TATTAATGAAACA-ACTGT....................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................GAAACA-ACTGTGAAACATTACATTAGAT...................................................................................................................................................................................................................................................................................................2811.0010010000000
.GTAATTG------TATTAATGAAACA-ACTGT....................................................................................................................................................................................................................................................................................................................2511.0010010000000
............................................................................TATAATGGTAGCACATGAATT....................................................................................................................................................................................................................................................2111.0010100000000
......................................ATTACATTAGATATCAAAGT...........................................................................................................................................................................................................................................................................................2011.0010010000000
..................................................................................................................................GTGA----G-----------CAAAGTGAAAATT-----------TTTCGGGTC..............................................................................................................................................................2711.0010100000000
droPer2
AGTAATTG------TATTAATGAAACA-ACTGTGAAACATTACATTAGATATCAAAGTGTAAGTTTTCATTAATTTTATAATGGTAGCACATGAATTTATAGCTAT-AAGTTGCAATTTCAACTTTTTTAGTGA----G-----------CAAAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCTCATAG-AG----------ACA------------------------GTCTAAATCCAATTAAAC--------ATGGGGAAAATT---TGAGCGAAAAGTGCTAAAA-ATTATTAAATAGATCAATGGGACAATAC---CGGGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............ATTAATGAAACA-ACTGTGAAACATT............................................................................................................................................................................................................................................................................................................2513.003300000
...................ATGAAACA-ACTGTGAAAC...............................................................................................................................................................................................................................................................................................................1813.003300000
.........................CA-ACTGTGAAACATTACA.........................................................................................................................................................................................................................................................................................................1811.001010000
..........................................CATTAGATATCAAAGTGTAAGTTTTCATT..............................................................................................................................................................................................................................................................................2911.001010000
.......................AACA-ACTGTGAAACATTACATT.......................................................................................................................................................................................................................................................................................................2211.001100000
.....................GAAACA-ACTGTGAAACAT.............................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
AGTAGTTTTAAATTAATTGACAAATTTGGTTGCGCAGCGTTTGAATAATAACTAAATTGTAAGTTGTATAGAAATTTGCATCGTTTGCTGT-GTTTATATAGCTTT-AAAATAAG-TTTAAATTTTG-----------------------------------T-----------TTTCGGGTCAA-ACCACACCCTCG-ATAG-AC----------ACATACATACACAAATGTATACATGAAAAGAAAATCCAATTAA-CGCACT---------TAAATG---TTTGTGGAAATACTTACTT-ATGTGT--------ATTAGAAACTATTT---CT-CTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................ATTTGGTTGCGCAGCGTTT...........................................................................................................................................................................................................................................................................................................1912.00200020
.......................ATTTGGTTGCGCAGCGTTTGAA........................................................................................................................................................................................................................................................................................................2212.00200020
..................GACAAATTTGGTTGCGCAGCGT.............................................................................................................................................................................................................................................................................................................2212.00200110
.......................................................ATTGTAAGTTGTATAGAAA...........................................................................................................................................................................................................................................................................1911.00100010
........................TTTGGTTGCGCAGCGTTTG..........................................................................................................................................................................................................................................................................................................1911.00100001
.....................AAATTTGGTTGCGCAGCGTTTGAAT.......................................................................................................................................................................................................................................................................................................2511.00100010
..................GACAAATTTGGTTGCGCAGCGTTT...........................................................................................................................................................................................................................................................................................................2411.00100100
.................................................................................................................................................................................................CCTCG-ATAG-AC----------ACATACATACACAAA..............................................................................................................2611.00101000
.......................ATTTGGTTGCGCAGCGTTTGAAT.......................................................................................................................................................................................................................................................................................................2311.00100010
..............................TGCGCAGCGTTTGAATAAT....................................................................................................................................................................................................................................................................................................1911.00100010
....................CAAATTTGGTTGCGCAGC...............................................................................................................................................................................................................................................................................................................1811.00100010
......................AATTTGGTTGCGCAGCGTTTGAAT.......................................................................................................................................................................................................................................................................................................2411.00100010
............................GTTGCGCAGCGTTTGAATAAT....................................................................................................................................................................................................................................................................................................2111.00100010
..............................TGCGCAGCGTTTGAATAATAACTAAAT............................................................................................................................................................................................................................................................................................2711.00100100
.......................ATTTGGTTGCGCAGCGTTTGA.........................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................ATAAG-TTTAAATTTTG-----------------------------------T-----------TTTCGGGTC..............................................................................................................................................................2611.00110000
.................TGACAAATTTGGTTGCGCAGC...............................................................................................................................................................................................................................................................................................................2111.00100010
......................AATTTGGTTGCGCAGCGTTTGA.........................................................................................................................................................................................................................................................................................................2211.00100100
...............................GCGCAGCGTTTGAATAATAACTAA..............................................................................................................................................................................................................................................................................................2411.00100001
............TTAATTGACAAATTTGGTTGCGCAGC...............................................................................................................................................................................................................................................................................................................2611.00100100
.................TGACAAATTTGGTTGCGCA.................................................................................................................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................G-ATAG-AC----------ACATACATACACAA...............................................................................................................2111.00100010
..................................................................TATAGAAATTTGCATCGTTTG..............................................................................................................................................................................................................................................................2111.00101000
........................TTTGGTTGCGCAGCGTTTGAAT.......................................................................................................................................................................................................................................................................................................2211.00100010
.........................TTGGTTGCGCAGCGTTTGAAT.......................................................................................................................................................................................................................................................................................................2111.00100010
...............ATTGACAAATTTGGTTGCGC..................................................................................................................................................................................................................................................................................................................2011.00100100
......................AATTTGGTTGCGCAGCGTTTG..........................................................................................................................................................................................................................................................................................................2111.00100100
.....................AAATTTGGTTGCGCAGCGTTTGA.........................................................................................................................................................................................................................................................................................................2311.00100010
......................AATTTGGTTGCGCAGCGTTT...........................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
AAAAGTTA------AACCAACAAATTT-GTTGTAAAGCGATTGAGCGAGATCTAAAGTGTAAGTTACATA-TTGTTTTCATTTACAATTGTAGACCACAAAGCTTT-AAATTACA-TTGAAAATCAGCAAGCGTTTATGTGTGTGT--GGTACAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TTTT-CA----------AAA-----------------------GGCGAAAATCTAATTATGC--------TT---------------------------TAGAA-ATTGGCAAAATGTCACAAAGTGATTTGC---T---TASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................TACAGTGAAAATT-----------TTTCGGGTCAACG..........................................................................................................................................................2615.005000000000000000000000000000200000000300000000000000000000000000
....................................................TAAAGTGTAAGTTACATA-TTGTTTTCA.....................................................................................................................................................................................................................................................................2713.003000000000000000000000000000200000000100000000000000000000000000
.................................................................................................CAAAGCTTT-AAATTACA-TTGAAAATCA.......................................................................................................................................................................................................................2712.002000000000000000000000000000100010000000000000000000000000000000
......................................................................................................................................................TACAGTGAAAATT-----------TTTCGGGTCAAC...........................................................................................................................................................2512.002000000000000000000000000000100000000100000000000000000000000000
.....................AAATTT-GTTGTAAAGCGATTGAGCGAG....................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................AAAATCAGCAAGCGTTTATGTG........................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
................CCAACAAATTT-GTTGTAAAGCGATTG..........................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................TACAGTGAAAATT-----------TTTCGGGTCA.............................................................................................................................................................2311.001000000000010000000000000000000000000000000000000000000000000000
............................GTTGTAAAGCGATTGAGCGAG....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.............................................CGAGATCTAAAGTGTAAGTTACATA-..............................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
........................................................GTGTAAGTTACATA-TTGTTTTCATTTA.................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
......................................GATTGAGCGAGATCTAAAGT...........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................TACAGTGAAAATT-----------TTTCGGGTCAACGC.........................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
....................................................TAAAGTGTAAGTTACATA-TTGTTT........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000100000000000000000000000000000000000
...................................................CTAAAGTGTAAGTTACATA-TTGTTT........................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
...............................GTAAAGCGATTGAGCGAGA...................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................AAAATCAGCAAGCGTTTATG..........................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
..................AACAAATTT-GTTGTAAAGCGAT............................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................TAAAGTGTAAGTTACATA-TTGTTC........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................GTACAGTGAAAATT-----------TTTCGGGTCAACG..........................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................TCAGCAAGCGTTTATGTGTG......................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AAAATCAGCAAGCGTTTATGTGT.......................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.....................AAATTT-GTTGTAAAGCGATTGAGC.......................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................................................TAAAGTGTAAGTTACATA-TTGTTTT.......................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
........................TTT-GTTGTAAAGCGATTGAGCGAG....................................................................................................................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
.............................................CGAGATCTAAAGTGTAAGTTACATA-T.............................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..........................T-GTTGTAAAGCGATTGAGCGAGA...................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................GTGT--GGTACAGTGAAAATT-----------TTTCGGG................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................AATCAGCAAGCGTTTATGTGTGT.....................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................TTGAAAATCAGCAAGCGTTTATGTGT.......................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
............................GTTGTAAAGCGATTGAGCG......................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..................................AAGCGATTGAGCGAGATCTAAAGT...........................................................................................................................................................................................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
..................................................TCTAAAGTGTAAGTTACATA-TTGTTT........................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................TACAGTGAAAATT-----------TTTCGGGT...............................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.....................AAATTT-GTTGTAAAGCGATT...........................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................GTAAAGCGATTGAGCGAGAT..................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................TGTAAAGCGATTGAGCGAGATCT................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................TTGAAAATCAGCAAGCGTTTATGTG........................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
AATAGTTA------AACCAACAAATTTCTTTGTAAAGCGGTTGAGCAAGGTCCAAAGTGTAAGTTACACATAGTTTTATTTGCACAATTATCGACCACATAGCTTT-AAATTGCATTTGAAAATCGGCTTGCGT----GTGTGTGTGTA--GTAGTGAAAATT-----------TTTCGGGTCAACGCCACACCCTCG-TTTT-TA----------TAT-----------------------CGAGAAAATCTAATTATGC--------TT----TCAATG---TG------------------------------------TGCACAATGC---CA-CTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................CAACAAATTTCTTTGTAAAGCGG.............................................................................................................................................................................................................................................................................................................2311.001000001
...............................GTAAAGCGGTTGAGCAAGGTCCAA..............................................................................................................................................................................................................................................................................................2411.001000001
.................................AAAGCGGTTGAGCAAGGTCCAAAGT...........................................................................................................................................................................................................................................................................................2511.001100000
..................AACAAATTTCTTTGTAAAGCGGT............................................................................................................................................................................................................................................................................................................2311.001100000
...............................GTAAAGCGGTTGAGCAAGGT..................................................................................................................................................................................................................................................................................................2011.001100000
....................CAAATTTCTTTGTAAAGCGGTTGAGC.......................................................................................................................................................................................................................................................................................................2611.001000001
......................AATTTCTTTGTAAAGCGGTTGAGC.......................................................................................................................................................................................................................................................................................................2411.001000001
droGri2
AATAGTTA------AACCAACAGATTT-TATGTGAAGCGGTTGAGAAATATTTAAAGTGTAAGTTGTATTAAGTTTTCTATCTGAAACT-ATTGACAGCATGGCTAAAACTTATGCTTGAAAATCGA---GCGAATTTGTGTGTGTGTA--TAATTGGAA-TTTTTTTCTCCATTTTCGGGTCAACGCCACACCCTTG-CTCGGAATTATATGCACACA------------------------CACAAAATCCAATTAA-TAG-TTTAAAC-------GTG---CAAATTATGGAATTTCATT-ATGATTTAATT----TTATGTGTAATG-----A-GTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:51 AM