ID:

dsi_7529

 Coordinate:

2l:20874219-20874368 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.7 -24.7 -24.7

Flybase annnotation

CDS [2l_20874369_20875089_-]; exon [2l_20874369_20875089_-]; intron [2l_20873522_20874368_-]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
DNAREP1_DMRCHelitron-

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATGATTGTAGACTTAATATCACCTTTCATCGAAGATAATTACAACGATGGTAAGTACGACTGAGATAAAGTACAGCAGGTCGGATAAAATATAAACTCAAGGGTATTATAATACAACCCGTTACTCGTAGAGTAAAAGGGTATACTAGGTTCGTTAAAAAGTAGAGATCTCAGGAACTGTAAAAGCTATAAGGTTGATACAGATTATAGAGACATAGACGCAGCGCAAGTTTGTTGACACATGTTGCCA
***************************************************..(((....(((((((....(((.......(((((................(((((.........((((.((((((...))))))..)))))))))..))))).......)))...)))))))..)))........*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 O001
Testis
 GSM343915
embryo
 M053
female body
 M025
embryo
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGC............................................................... 24 0 1 24.00 24 16 0 4 3 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TGTAAAAGCTATAAGGTTGATACAGA.............................................. 26 0 1 14.00 14 3 0 2 5 3 1 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGCT.............................................................. 25 0 1 10.00 10 6 0 2 0 1 1 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGAAC........................................................................ 27 0 1 8.00 8 1 6 0 0 1 0 0 0 0 0 0 0
........................................TACAACGATGGTAAGTACGACTGAGA........................................................................................................................................................................................ 26 0 1 6.00 6 0 0 5 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGG........................................................................... 24 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TAAAAAGTAGAGATCTCAGGAACTGTA.................................................................... 27 0 1 5.00 5 1 0 0 2 0 2 0 0 0 0 0 0
......................................................................................................................................................TTCGTTAAAAAGTAGAGATCTCAGGA.......................................................................... 26 0 1 5.00 5 0 2 2 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................TAGAGATCTCAGGAACTGTAAAAGC............................................................... 25 0 1 5.00 5 3 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGAA......................................................................... 26 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAGT................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TATAAGGTTGATACAGATTATAGAGACA................................... 28 0 1 4.00 4 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGA.......................................................................... 25 0 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TTCGTTAAAAAGTAGAGATCTCAGG........................................................................... 25 0 1 4.00 4 0 0 2 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTATAAGGT....................................................... 24 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGATACAGATTATAGAGACATAGACG............................. 26 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGCTA............................................................. 26 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................TACTAGGTTCGTTAAAAAGTAGAGATC................................................................................ 27 0 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTATAAGG........................................................ 23 0 1 3.00 3 0 1 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAGC......................... 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGATACAGATTATAGAGACATAGACGC............................ 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCA...................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTATAAGGTT...................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GATACAGATTATAGAGACATAGACGC............................ 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTATAAGGTTG..................................................... 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.......................................TTACAACGATGGTAAGTACGACTGAGA........................................................................................................................................................................................ 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................................TAAGTACGACTGAGATAAAGTACAGC............................................................................................................................................................................. 26 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCA........................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAGTT.................. 27 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TTGATACAGATTATAGAGACATAGACG............................. 27 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
........................................TACAACGATGGTAAGTACGACTGAGAA....................................................................................................................................................................................... 27 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAGACGC............................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCGTAGAGTAAAAGGGTATACTAGGT................................................................................................... 26 0 6 1.17 7 0 2 0 0 0 5 0 0 0 0 0 0
............................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCAA..................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TCAGGAACTGTAAAAGCTATAAGGT....................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCAGGAACTGTAAAAGCTATAAGGTTGA.................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGAACT....................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................TCGGATAAAATATAAACTCAAGGGT................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TATAAGGTTGATACAGATTATAGAGAC.................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TAAGGTTGATACAGATTATAGAGA..................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTCAGGAACTGTAAAAGCTATAAGGT....................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTACGACTGAGATAAAGTAC................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTCAGGAACTGTAAAAGCTATAAGGT....................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAG................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAG................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TACAGCAGGTCGGATAAAATATAAACTC....................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAAGTACGACTGAGATAAAGTA................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................TACAACCCGTTACTCGTAGAGT.................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TAAAAGCTATAAGGTTGATACAGA.............................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................CTAGGTTCGTTAAAAAGTAGAGATC................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................AAAAAGTAGAGATCTCAGGAACTGTA.................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAGC......................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGC....................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAA.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGC............................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTAAAAGCTATAAGGTTG..................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................ACCTTTCATCGAAGATAATTACAACGA.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............TAATATCACCTTTCATCGAAGATAATA................................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......TGTAGACTTAATATCACC.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAG.................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TAAAAAGTAGAGATCTCAGGAACTG...................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAGTAGAGATCTCAGGAACTGTAAAAGC............................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..TGATTGTAGACTTAATATCACCTT................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGCGCAAGTTTGTTGACACATGTT.... 24 0 2 1.00 2 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TCTCAGGAACTGTAAAAGCTATAAGG........................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TACGACTGAGATAAAGTACAGCAGGT......................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGT.......................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAG.......................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAGCGT....................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAT.................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AAAGCTATAAGGTTGATACAGAT............................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................TAAAGTACAGCAGGTCGGATAAAATA.............................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................GATAAAGTACAGCAGGTCGGATAAAA................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCAAGT................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCA...................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTAAAAAGTAGAGATCTCAGGAACTGTA.................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCGTTAAAAAGTAGAGATCTCAGGAAA........................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGATACAGATTATAGAGACATAGAC.............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGCTATT........................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TGTAAAAGCTATAAGGTTGATACAGAT............................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................GTAGAGATCTCAGGAACTGTAAAAGC............................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAG.......................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGTG...................................................... 25 2 12 0.83 10 9 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................GATCTCAGGAACTGTAAAAGCTA............................................................. 23 0 6 0.83 5 0 0 1 1 0 3 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGTGG..................................................... 26 2 8 0.75 6 5 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TCGTAGAGTAAAAGGGTATACTAGG.................................................................................................... 25 0 8 0.63 5 0 0 0 0 0 3 0 0 0 0 2 0
................................................................................................................................TAGAGTAAAAGGGTATACTAGGTT.................................................................................................. 24 0 5 0.60 3 0 0 0 0 0 3 0 0 0 0 0 0
.............................................................................TGGACGGATAAAATATAAA.......................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCC...................... 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CCAGGAACTGTAAAAGCTATAAGG........................................................ 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGT................... 24 0 20 0.50 10 0 9 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTT.................. 25 0 20 0.50 10 0 7 0 0 0 2 1 0 0 0 0 0
......................................................................................................................................................................................................TACAGATTATAGAGACATAGACGT............................ 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGCGCAAGTTTGTTGACACATGTTGC.. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTATAGGGT....................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGT............................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTT................. 26 0 20 0.40 8 1 4 0 1 0 0 2 0 0 0 0 0
................................................................................................................................TAGAGTAAAAGGGTA........................................................................................................... 15 0 20 0.35 7 0 0 0 0 0 7 0 0 0 0 0 0
....................................................................................................................................................................GAGATCTCAGGAACTGTAAAAGCTA............................................................. 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGG........................................................ 23 1 10 0.30 3 2 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTTG................ 27 0 20 0.30 6 0 2 0 1 0 2 0 1 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTTGT............... 28 0 20 0.25 5 0 3 0 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................AGAGATCTCAGGAACTGTAAAAGCATA............................................................ 27 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAGT......................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TAGAGTAAAAGGGTATACTAGGTTC................................................................................................. 25 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGTGGC.................................................... 27 3 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGAGACATAGACGCAGCT........................ 21 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AAAAGGGTATACTAGG.................................................................................................... 16 0 15 0.20 3 0 0 0 0 0 3 0 0 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGT....................................................... 24 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCGTAGAGTAAAAGGGTATACTAGGTT.................................................................................................. 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTCAGGAACTGTAAAAGCTA............................................................. 21 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTCAGGAACTGTAAAAGC............................................................... 19 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAG.................... 23 0 20 0.15 3 0 1 0 0 0 0 0 0 0 0 0 2
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGTGGA.................................................... 27 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GATCTCAGGAACTGTAAAAG................................................................ 20 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................AGAGTAAAAGGGTATACTAGG.................................................................................................... 21 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................AGGACGGTAAGTACGACTT........................................................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................CAGGAACTGTAAAAGCTAAAAGGTGGT.................................................... 27 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AAAAGGGTATACTAGGTTC................................................................................................. 19 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TGTAAAAGCTAGAAGGTTGATT.................................................. 22 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGACGCAGCGCAAGTTTG................ 18 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
..................................................................................................................................GAGTAAAAGGGTATACTAGG.................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAA..................... 22 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TAGAGTAAAAGGGTAAACTAGGT................................................................................................... 23 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TAGAGTAAAAGGGTATACTAGGTTAA................................................................................................ 26 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................AGGGTATACTAGGTT.................................................................................................. 15 0 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................GTAAAAGGGTATACTAGG.................................................................................................... 18 0 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAAT......................... 26 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ACAGATCTCAGGAACTGTTAAAGCTAGA........................................................... 28 3 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCCCAAG.................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCA...................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................TCGTAGAGTAAAAGGGTATACTA...................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGA................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................................................CGCAGCGCAAGTTTG................ 15 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................AGAGACATAGACGCAGCGCAAGTTTG................ 26 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TTACTAACATCTGAATTATAGTGGAAAGTAGCTTCTATTAATGTTGCTACCATTCATGCTGACTCTATTTCATGTCGTCCAGCCTATTTTATATTTGAGTTCCCATAATATTATGTTGGGCAATGAGCATCTCATTTTCCCATATGATCCAAGCAATTTTTCATCTCTAGAGTCCTTGACATTTTCGATATTCCAACTATGTCTAATATCTCTGTATCTGCGTCGCGTTCAAACAACTGTGTACAACGGT
***************************************************************..(((....(((((((....(((.......(((((................(((((.........((((.((((((...))))))..)))))))))..))))).......)))...)))))))..)))........*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 M023
head
 SRR902009
testis
 M053
female body
 GSM343915
embryo
....................................................................................................................................................CCAAGCAATTTTTCATCTCTAGAGT............................................................................. 25 0 1 14.00 14 6 4 3 1 0 0 0 0 0 0 0
...................................................................................................................................................TCCAAGCAATTTTTCATCTCTAGAGT............................................................................. 26 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0
.....................................TTAATGTTGCTACCATTCATGCTGACT.......................................................................................................................................................................................... 27 0 1 7.00 7 2 4 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTTTCATCTCTAGAGTCCTTGACA..................................................................... 24 0 1 4.00 4 1 0 2 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATTCCAACTATGTCTAATATCTCTGT................................... 26 0 1 4.00 4 2 0 2 0 0 0 0 0 0 0 0
......................................TAATGTTGCTACCATTCATGCTGACTCT........................................................................................................................................................................................ 28 0 1 4.00 4 0 2 1 1 0 0 0 0 0 0 0
..........................................................................................ATATTTGAGTTCCCATAATATTATGT...................................................................................................................................... 26 0 1 4.00 4 0 2 0 2 0 0 0 0 0 0 0
.......................................AATGTTGCTACCATTCATGCTGACTCT........................................................................................................................................................................................ 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATTCCAACTATGTCTAATATCTCTGTA.................................. 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................ATTTTTCATCTCTAGAGTCCTTGACA..................................................................... 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CAAGCAATTTTTCATCTCTAGAGTCCT.......................................................................... 27 0 1 3.00 3 1 0 1 1 0 0 0 0 0 0 0
.......................................AATGTTGCTACCATTCATGCTGACTCTA....................................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCAACTATGTCTAATATCTCTGTAT................................. 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................................................................AAGCAATTTTTCATCTCTAGAGTCCT.......................................................................... 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................CAAGCAATTTTTCATCTCTAGAGT............................................................................. 24 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
........................................................................................................ATAATATTATGTTGGGCAATGAGCAT........................................................................................................................ 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
..............................................CTACCATTCATGCTGACTCTATTTCA.................................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................CTCTATTTCATGTCGTCCAGCCTAT................................................................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.......................................AATGTTGCTACCATTCATGCTGACTCTAT...................................................................................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................ATGTTGGGCAATGAGCATCTCATTTT................................................................................................................ 26 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0
.....................................................................TCATGTCGTCCAGCCTATTTTATAT............................................................................................................................................................ 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
..............................................CTACCATTCATGCTGACTCTATTTC................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AAAAAGCAATTTTTCATCTCTAGAGT............................................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................CTATTTCATGTCGTCCAGCCTATTTT................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................CTCTATTTCATGTCGTCCAGCCTATT.................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................TTTTTCATCTCTAGAGTCCTTGACAT.................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................ATGTTGCTACCATTCATGCTGACTCT........................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................TAATGTTGCTACCATTCATGCTTACT.......................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AAGCAATTTTTCATCTCTAGAGT............................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CCAAGCAATTTTTCATCTCTAGAGTCCT.......................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCATCTCTAGAGTCCTTGACA..................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................ATCCAAGCAATTTTTCATCTCTAGAGT............................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ATATCTCTGTATCTGCGTCGCGTTCAA.................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTAATATCTCTGTATCTGCGTCGC........................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................TTTCATGTCGTCCAGCCTATTTT................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................ACAAGCAATTTTTCATCTCTAGAGT............................................................................. 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATTCCAACTATGTCTAATATCTCTGTAT................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......ACATCTGAATTATAGTGGAAAGTAGCTT........................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCATCTCTAGAGTCCTTGACATTTT................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................ATGTTGGGCAATGAGCATCTCATTT................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................TTCATGTCGTCCAGCCTATTTTAT.............................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TCCAACTATGTCTAATATCTCTGTAT................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................ATTATGTTGGGCAATGAGCATCTCAT................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................TGCTACCATTCATGCTGACTCTATTT.................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................TAATGTTGCTACCATTCATGCTGACT.......................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTAGAGTCCTTGACATTTTCGATA............................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................GTCCAGCCTATTTTATAT............................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................................ATTAATGTTGCTACCATTCATGCTGACT.......................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................TTAATGTTGCTACCATTCATGCTGACTCT........................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TCAAGCAATTTTTCATCTCTAGAGTCCT.......................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TATTATGTTGGGCAATGAGCATCTCAT................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................AATTTTTCATCTCTAGAGTCCTTGACA..................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TGTTGGGCAATGAGCATCTCATTTT................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AATTTTTTATCTCTAGAGTCCTTGACA..................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TCATGTCGTCCAGCCTATTTTAT.............................................................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........CTGAATTATAGTGGAAAGTAGCTT........................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTTTCATCTCTAGAGTCCTTGACAT.................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCATCTCTAGAGTCCTTGACATTTT................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ATTTTTCATCTCTAGAGTCCTTGACAT.................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CTCTAGAGTCCTTGACATTTTCGATA............................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................TGATGTCGTCCAGCCTATTTTATATT........................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................TAATGTTGCTACCATTCATGCTGACTCTAT...................................................................................................................................................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TAATATTATGTTGGGCAATGAGCATCT...................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................TGCTACCATTCATGCTGACTCTAT...................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGCAATTTTTCATCTCTAGAGTCCTTGACA..................................................................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................TGCTACCATTCATGCTGACTCTATT..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................TTCATGTCGTCCAGCCTATTTTATAT............................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................GTTGCTACCATTCATGCTGACTCTAT...................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................AGTGGAAAGTAGCTTCTATTAATGT.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................AGTAGCTTCTATTAATGTTGCTACCAT..................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTTTCATCTCTAGAGTCCTTGACA..................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CATCTCTAGAGTCCTTGACA..................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................TCTAGAGTCCTTGACATTTTCGAT............................................................. 24 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGTCGCGTTCAAACAACTGTGT........ 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................AAAAGCCTATTTTATATTTGAGT...................................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................................TCTATTAAGGTTGGTATCATT.................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATCTGCGTCGCGTTCAAACAACTGT.......... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................GGGCAATGAGCATCTCATTTTCCCAT........................................................................................................... 26 0 20 0.30 6 0 0 0 6 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTATCTGCGTCGCGTTCAAACAAC............. 25 0 20 0.30 6 2 0 0 0 3 0 0 0 0 0 1
........................................................................................................................................................................................................GTCTAATATCTCTGTGTCTGC............................. 21 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TGGGGGGCAATGAGCATCTCATTTT................................................................................................................ 25 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................TGGGCAATGAGCATCTCAT................................................................................................................... 19 0 20 0.25 5 0 0 0 0 5 0 0 0 0 0 0
......................................................................................................................................................................CTAGAGTCCTTGACA..................................................................... 15 0 14 0.21 3 0 0 0 0 3 0 0 0 0 0 0
............................................................................................................................................................................................................................CGTCGCGTTCAAACAAC............. 17 0 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0
......................................................................................................................GGCAATGAGCATCTCATTTTCCCATATGAT...................................................................................................... 30 0 20 0.15 3 0 2 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TATCTGCGTCGCGTTCAAACAAC............. 23 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0
..........................................................................................................................ATGAGCATCTCATTTTCCCATATGAT...................................................................................................... 26 0 20 0.15 3 0 2 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................CTCTAGAGTCCTTGACA..................................................................... 17 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCTGCGTCGCGTTCA................... 15 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCTGTATCTGCGTCGCGT...................... 19 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGTATCTGCGTCGCGTTCAAACAAC............. 26 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATCTGCGTCGCGTTCAAACAAC............. 22 0 20 0.10 2 0 0 0 0 0 0 1 0 1 0 0
...............................................................................................................................................................TTCGTCTCCAGAGTCCTTGATATTTT................................................................. 26 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................ATGAGCATCTCTTTTTCCCATATGAT...................................................................................................... 26 1 20 0.10 2 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TGCATCTCTAGAGTCCTTGACA..................................................................... 22 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TTGACATTTTCGATTTTCCACCT.................................................... 23 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTTGCAGCTCTAGAGTCCTTGACA..................................................................... 25 2 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................GTCTGCGTCGCGTTCAAACAACTCT.......... 25 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTGCGTCGCGTTCAAACAAC............. 20 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................TAGTATCTGCGTCGCGTTCAAACAAC............. 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTCAAACAACTGTGTTCAAGAGT 23 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGTATCTGCGTCGCGTTCAAACAA.............. 25 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................TTTTTATTTGAGTTC.................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCTGTATCTGCGTCGCGTTCAA.................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GGCAATGAGCATCTCATTTTCCCATAT......................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGTATCTGCGTCGCGTTC.................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTATCTGCGTCGCGTTCAAACAAC............. 24 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATCTCTGTATCTGCGTCGCGT...................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................GCATGTTTTCATCTCTA................................................................................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TCTGTATCTGCGTCGCGT...................... 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCTGTATCTGCGTCGCGTTCAAACAA.............. 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCGTCGCGTTCAAACAAC............. 18 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTATCTGCGTCGCG....................... 15 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................AATGAGCATCTCTTTTTCCCATATGAT...................................................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTCTGTATCTGCGTCGCGTTCAAACAAC............. 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................CTGCGTCGCGTTCAAACAACT............ 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................CTGTATCTGCGTCGCGTT..................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................CTGAGCATCTCATTTTCCCATATGATC..................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TCTGTATCTGCGTCGCGTTCAA.................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGTCGCGTTCAAACAA.............. 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................ATCTCTGTATCTGCGTCGCGTTCAA.................. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20874169-20874418 - dsi_7529 AATGATTG-TAGACTT---------------------------AATATCACCTTT-CATCGAAGATAATT---ACAACGATGGTAAGTACG-ACTGAGATAA--AGTAC-AGCAGGT-CGGAT--------AAAATATAA---ACTCAAGGGTATTATAATA--------------CA---------ACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGATTATAGAGACATAGACGCAGCGCAAGTTTGTTGACACATGTTGCCA--
droSec2 scaffold_28:45321-45570 - AATGATTG-TAGACTT---------------------------AATATCACATTT-CATCGAAGATAATT---ACAACGATGGTGAGTACG-ACTGAGATAA--AGTAC-AGCAGGT-CGGAC--------AAAATATAA---ACTCAAGGGTATTATAATA--------------CA---------ACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGATTATAGAGACATAGACGCAGCGCAAGTTTGTTGACACATGTTGCCA--
dm3 chr2L:21586243-21586449 - AATGATTG-TAGACTT---------------------------AATATCACCTTT-TATCGAAGATAACT---ATAATGATGGTGAGTACG-ACTGAGATAA--AATAC-AGCAGGT-AGGAT--------AAAACATAA---ATTCA-GGGTATTATAATAATTATTGTTGTA--TA----ATTATACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGATTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGT--------------AACCCAGGTTGCCA--
droEre2 scaffold_4820:9072745-9073031 + GATGTTAA-ACAGAAT---------------------------AATGACTTTCTG-TTACGG---CGAGT---GCAATGAAAGCAAAT------------AA--AACGC-AGCACTA-TAGAT--------AATATTTAT---CC--------ATTACAACA--------------CAACGTTTTATACCCGTTACTCGTTCAGTAA-----GAGGCTATACTAGATACGTTTAAAAGTTTGTAACAGG---CAGAAGGAAGCGTTTCCGACCATATAAAGT--------------------------------------------ATATGTATATATTCTTGATCAG-----------------------GTTTAGAAGGTTTAGACTAAGCATGCCGCTTCTAGACACGTAGACGCATCGCAAGTTTTATTTTAAATGTTGCCA--
droYak3 3L:24084126-24084391 + TTCATCGA-GCATGCA-----------AATATCGATGG--GCC----------------------------------------TAGATGGG-ACT-AGATAA--ATTCCAAGCAATT-CGAAT--------AAAGCATTC---CCTCT-G--------------------------------GTTATAACTGTTACT--------------------------TGACTCGTTGAAAAGTATGCAAAAGG---TAGATGAAATCGTTTCCGACCGTATAAAGT--------------------------------------------ACA----TATATTCTTGATCAGGATCAAAAGACGGGTGGATCTGGCCCTAGAAAGTTGAGATTAAGCATACAGACTCCCAAGACATAGAAGCAGCGCAAGTTTGTCGATTCATGTTGCCA--
droEug1 scf7180000409791:7419-7642 + TTA-----------------------------------------ATACCACATTA-TAAAGCCAATAGTA---ACGAA----GTAAATAAG-AAAAAAATGT--ATT-------------AGA--------AAAATATAT---ATTC-------------------------CA--CC---------ATCGTAAACTCATTGGGTAAATCTAAGGAATATGCCAGTCTCGATCATGCGTTCGT-------------------------------------------------------------------GGAGAGATCAATA---GC----------------------------------------GAAGTCGATTGAGTTGAGTTTAGGCATGAATATTCTTGAGGTCTCTGGACAGCGCAAGTTTATTTCAGCATCCTGCCG--
droBia1 scf7180000299307:26197-26380 + AAGCATAG-AAGGTTA---------------------------TGTGTTAAAAA---------------------------------------------------------GCACC-------------------------------AAAGATATT--------------------------ATTATACCCGTTACTCGGAGAGCAA-----AGGGGTATACTAGATTCTTCAGAGAGTATGTAACGGG---TAAAAGGAAGCTTTTCCAACCCCATAAAGT--------------------------------------------AAA----TATATTCTTGATCAG--------------------------------------------------------------GATCACTATGATCAGGATCATT--ATAATGGTGCCA--
droTak1 scf7180000412540:8441-8676 + AATGGCTCATAGGCTTTGATTGAATCAAATTACGATGGAACCT----------------------------------------TAAATGCA-ATTATGTAAG--AGG----GCATC-------------------------------TAAGATATT--------------------------TTTATACCCGTTACTCGTAGAGTAA-----AAGGGTGTTTTGTATTCGAGCAAAAGTATGTAACAG-------------------------------------------------------------CTGAGATCTCGGAAACTAC----------------------------------------AAAAGCTAGAAGGTTGAGATTTCCCACACATATTCTTGGGCTTCCTACTCAGCGCAAGTTTATTTCAGCCGAGCGCCA--
droEle1 scf7180000488983:11956-12116 - AAAAATAT-TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCCGTTACTCGTAGAGTAA-----AACAGTATATTGTTATCGGTCTAG-CCATGTTA---------------------------------------------------ATCTGTAAGAACGTCGAGATCTAGGAAACTAT----------------------------------------AAAAGACTTAAGATTT------------AAAATTCTAGTATTTCCTACGCAACGCAAGTTTATTTGAAAATGGAGCCA--
droRho1 scf7180000766158:46811-47177 + AATGCTTG-TAGTCTTTGTCT----------------------AATAGCACATTTTCGTCCAAAATTATTATTAAAATTATCATAATTACT-AACGCAATCATTAATCC-AGCATGCCCGGACATATGATGGAAATACAGATCTTTCA-AGTTGTAATGATGTTCTTTCATGTATTTA----ATTATACTCGTTACTCGTAGAGTAA-----AAGGGTATATTGTATTCGTGC-AAAGTATGTAACCGTATGAGTATGACCGTCTGTCCGTCTGTCTG---TCCGTCTGTCTCTCTGTCCGTATGAACGCTGAGATCTCGGAAACTAT----------------------------------------AAAAGCTAGAAGATTGGCATTTTGCATGTAGATTTTAGGAGTTCCTACGCAGCGCAAGTTTGTTTCAAAATGGTGCCA--
droFic1 scf7180000453495:181638-181747 + GTCCGTAT-TAAAGTC---------------------------GAGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGGAACTGC----------------------------------------AGGAACTAGAATATTGGGATTAAAACTGTAGATACTTATTATTCTTACGCAGTGCAAGTTTGTTAAATTGTTTTGCCA--
droKik1 scf7180000302390:621375-621434 - CATGATTG-TGGACTT---------------------------GATATCGCCACT-TATCGAGGAGAACT---ACAACGATGGC---TACA-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG--
droAna3 scaffold_12916:9200627-9200681 - AATGATTG-TTGATTT---------------------------GATTTCGCCGAT-AATCGAGGAGAACT---ATAATGATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395368:31896-32002 + GTCCGTAT-AAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGGATCTCAGAAACTATATGA------------------------------------AAAATCTATAGGATT------TGGCGTGGAGACTCTAC-AATGCCCACGCTGTTCAAGTTTGTTTCAAAATTTTTCCA--
dp5 4_group4:3547143-3547201 - AATGATTG-TGGATCT---------------------------AATATCACCTAT-AATTGAGGAAAACT---ACAATGATGGTATGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_10:2574914-2575037 - AATGATTG-TGGATCT---------------------------AATATCACCTAT-AATTGAGGAAAACT---ACAATGATGGTATGTGTGGATTGTCCCAA--GCTGT-AATTACT-CGTAT--------ATAGCA-AA---ACTCATCGATTTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTACA------------------A--CTGGT
droWil2 scf2_1100000003890:7166-7268 + GTCCGTAT-GAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGATCTCAGAGACTGT----------------------------------------AAAAGCCACCAAATTTGG------TAT-TAGACTCGTGTAGTATGTAAAGTGATCAAGTTTAATTTAAATTTTTGCCA--
droVir3 scaffold_12723:4651123-4651178 + AATGATTG-TCGATCT---------------------------GATCTCTCCCCT-GATCGAGGAGAACT---ACAATGATGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:10616595-10616650 + AATGATTG-TGGATCT---------------------------GATCTCGCCGCT-CATCGAGGAGAACT---ACAATGATGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:3600274-3600334 + AATGATTG-TCGATCT---------------------------GATATCCCCACT-CATTGAGGAGAATT---ATAATGATGGTAAGTATA-AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATGATTG-TAGACTT---------------------------AATATCACCTTT-CATCGAAGATAATT---ACAACGATGGTAAGTACG-ACTGAGATAA--AGTAC-AGCAGGT-CGGAT--------AAAATATAA---ACTCAAGGGTATTATAATA--------------CA---------ACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGATTATAGAGACATAGACGCAGCGCAAGTTTGTTGACACATGTTGCCA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGC..........................................................................24124.0024000000416301000000
.....................................................................................................................................................................................................................................................................................................................................TGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGA................................................26114.001400000023531000000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGCT.........................................................................25110.001000000026011000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAAC...........................................................................................................................2718.00800000001010060000
.....................................................................T---ACAACGATGGTAAGTACG-ACTGAGA.............................................................................................................................................................................................................................................................................................................................................................2616.00600000050100000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGG..............................................................................................................................2415.00500000000000050000
.......................................................................................................................................................................................................................................TAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------A...............................................................................2715.00500000001202000000
..................................................................................................................................................................................................................................TTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGA.............................................................................................................................2615.00500000020000021000
..............................................................................................................................................................................................................................................T-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGC..........................................................................2515.00500000003020000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAA............................................................................................................................2615.00500000000000050000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAGT.....................2614.00400000004000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATAAGGTTGA---------TACAGATTATAGAGACA.....................................2814.00400000002020000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGA.............................................................................................................................2514.00400000000000040000
..................................................................................................................................................................................................................................TTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGG..............................................................................................................................2514.00400000020110000000
..............................................................................................................................................................................................................................................................................................................................CAGGAACTGT----------------------------------------AAAAGCTATAAGGT..................................................................2413.00300000002100000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGA---------TACAGATTATAGAGACATAGACG...............................2613.00300000001020000000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTA........................................................................2613.00300000002010000000
...........................................................................................................................................................................................................................TACTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATC...................................................................................................................................2713.00300000011010000000
..............................................................................................................................................................................................................................................................................................................................CAGGAACTGT----------------------------------------AAAAGCTATAAGG...................................................................2313.00300000010100010000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAGC...........................2713.00300000012000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGA---------TACAGATTATAGAGACATAGACGC..............................2713.00300000002000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCA........................2412.00200000001000010000
..............................................................................................................................................................................................................................................................................................................................CAGGAACTGT----------------------------------------AAAAGCTATAAGGTT.................................................................2512.00200000002000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GA---------TACAGATTATAGAGACATAGACGC..............................2612.00200000000000020000
..............................................................................................................................................................................................................................................................................................................................CAGGAACTGT----------------------------------------AAAAGCTATAAGGTTG................................................................2612.00200000011000000000
....................................................................TT---ACAACGATGGTAAGTACG-ACTGAGA.............................................................................................................................................................................................................................................................................................................................................................2712.00200000020000000000
...................................................................................TAAGTACG-ACTGAGATAA--AGTAC-AGC...............................................................................................................................................................................................................................................................................................................................................2612.00200000010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCA.............................2412.00200000000000020000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAGTT....................2712.00200000000000011000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGA---------TACAGATTATAGAGACATAGACG...............................2712.00200000001001000000
.....................................................................T---ACAACGATGGTAAGTACG-ACTGAGAA............................................................................................................................................................................................................................................................................................................................................................2712.00200000010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAGACGC..............................2412.00200000002000000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAGGT.............................................................................................................................................................................................................................2661.17700000000005020000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCAA.......................2511.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................TCAGGAACTGT----------------------------------------AAAAGCTATAAGGT..................................................................2511.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................TCAGGAACTGT----------------------------------------AAAAGCTATAAGGTTGA---------......................................................2811.00100000000000010000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACT..........................................................................................................................2811.00100000001000000000
....................................................................................................................T-CGGAT--------AAAATATAA---ACTCAAGGGT.......................................................................................................................................................................................................................................................................................................2511.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................TATAAGGTTGA---------TACAGATTATAGAGAC......................................2711.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................TAAGGTTGA---------TACAGATTATAGAGA.......................................2411.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................TCTCAGGAACTGT----------------------------------------AAAAGCTATAAGGT..................................................................2711.00100000001000000000
...................................................................................TAAGTACG-ACTGAGATAA--AGTAC-..................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
............................................................................................................................................................................................................................................................................................................................CTCAGGAACTGT----------------------------------------AAAAGCTATAAGGT..................................................................2611.00100000000010000000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAG...........................................................................2311.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAG..................................2011.00100000000001000000
..........................................................................................................TAC-AGCAGGT-CGGAT--------AAAATATAA---ACTC.............................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................................................................................TGGTAAGTACG-ACTGAGATAA--AGTA....................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
................................................................................................................................................................TA--------------CA---------ACCCGTTACTCGTAGAGT...................................................................................................................................................................................................................................................2211.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................T----------------------------------------AAAAGCTATAAGGTTGA---------TACAGA................................................2411.00100000000001000000
.............................................................................................................................................................................................................................CTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATC...................................................................................................................................2511.00101000000000000000
........................................................................................................................................................................................................................................AAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------A...............................................................................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAGC...........................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGC.........................2311.00100000000000010000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAA.............................................................................2111.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGC..............................2311.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................GT----------------------------------------AAAAGCTATAAGGTTG................................................................1811.00100000000001000000
.................................................ACCTTT-CATCGAAGATAATT---ACAACGA................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
...............T---------------------------AATATCACCTTT-CATCGAAGATAATA---.......................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
......TG-TAGACTT---------------------------AATATCACC............................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAG......................2511.00100000000100000000
.......................................................................................................................................................................................................................................TAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTG.........................................................................................................................2511.00100000000000010000
...........................................................................................................................................................................................................................................AAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGC..........................................................................2811.00100000001000000000
..TGATTG-TAGACTT---------------------------AATATCACCTT..........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGTTTGTTGACACATGTT......2421.00200000001010000000
...........................................................................................................................................................................................................................................................................................................................TCTCAGGAACTGT----------------------------------------AAAAGCTATAAGG...................................................................2611.00100000001000000000
.......................................................................................TACG-ACTGAGATAA--AGTAC-AGCAGGT-..........................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGT.............................................................................................................................2511.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAG............................2611.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAGACGCAGCGT.........................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCAAT......................2511.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................AAAGCTATAAGGTTGA---------TACAGAT...............................................2311.00100000000001000000
...................................................................................................TAA--AGTAC-AGCAGGT-CGGAT--------AAAATA.......................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................GATAA--AGTAC-AGCAGGT-CGGAT--------AAAA.........................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCAAGT.....................2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCGCA........................2311.00100000010000000000
......................................................................................................................................................................................................................................TTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------A...............................................................................2811.00100000010000000000
...................................................................................................................................................................................................................................TCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAAA...........................................................................................................................2711.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGA---------TACAGATTATAGAGACATAGAC................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTATT......................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................TGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGAT...............................................2711.00100000000010000000
.............................................................................................................................................................................................................................................GT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGC..........................................................................2611.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAG............................2511.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................GATCTCAGGAACTGT----------------------------------------AAAAGCTA........................................................................2360.83500000010103000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAGG..............................................................................................................................................................................................................................2580.63500020000003000000
.......................................................................................................................................................................................................TAGAGTAA-----AAGGGTATACTAGGTT............................................................................................................................................................................................................................2450.60300000000003000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGAGACATAGACGCAGCGCC........................2420.50100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGT.....................24200.501000000000001090000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTT....................25200.501000000000002071000
..........................................................................................................................................................................................................................................................................................................................................................................................................TACAGATTATAGAGACATAGACGT..............................2420.50100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGTTTGTTGACACATGTTGC....2620.50100000001000000000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGT..........................................................................2420.50100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTT...................26200.40800000001100042000
.......................................................................................................................................................................................................TAGAGTAA-----AAGGGTA.....................................................................................................................................................................................................................................15200.35700000000007000000
.......................................................................................................................................................................................................................................................................................................................GAGATCTCAGGAACTGT----------------------------------------AAAAGCTA........................................................................2530.33100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTTG..................27200.30601000000102020000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGTTTGT.................28200.25500000000002030000
......................................................................................................................................................................................................................................................................................................................AGAGATCTCAGGAACTGT----------------------------------------AAAAGCATA.......................................................................2740.25100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAGT...........................2640.25100000000000010000
.......................................................................................................................................................................................................TAGAGTAA-----AAGGGTATACTAGGTTC...........................................................................................................................................................................................................................2550.20100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATAGAGACATAGACGCAGCT..........................2150.20100000001000000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGG..............................................................................................................................................................................................................................16150.20300000000003000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAGGTT............................................................................................................................................................................................................................2750.20100000000000010000
...........................................................................................................................................................................................................................................................................................................................TCTCAGGAACTGT----------------------------------------AAAAGCTA........................................................................2160.17100000010000000000
...........................................................................................................................................................................................................................................................................................................................TCTCAGGAACTGT----------------------------------------AAAAGC..........................................................................1960.17100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAG......................23200.15300200000000010000
.........................................................................................................................................................................................................................................................................................................................GATCTCAGGAACTGT----------------------------------------AAAAG...........................................................................2070.14100000000001000000
........................................................................................................................................................................................................AGAGTAA-----AAGGGTATACTAGG..............................................................................................................................................................................................................................2180.13100000000001000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGGTTC...........................................................................................................................................................................................................................19100.10100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCAGCGCAAGTTTG..................18200.10200000000002000000
.........................................................................................................................................................................................................GAGTAA-----AAGGGTATACTAGG..............................................................................................................................................................................................................................20100.10100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAA.......................22200.10200000000000020000
.......................................................................................................................................................................................................TAGAGTAA-----AAGGGTATACTAGGTTAA..........................................................................................................................................................................................................................26120.08100000000001000000
.....................................................................................................................................................................................................................AGGGTATACTAGGTT............................................................................................................................................................................................................................15130.08100000000001000000
...........................................................................................................................................................................................................GTAA-----AAGGGTATACTAGG..............................................................................................................................................................................................................................18130.08100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTATAGAGACATAGACGCAAT...........................26140.07100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCA........................21200.05100000000000001000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTA................................................................................................................................................................................................................................23200.05100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGACATAGACGCAGCGCAAGA.....................24200.05100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCGCAAGTTTG..................15200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACATAGACGCAGCGCAAGTTTG..................26200.05100000000001000000
droSec2
AATGATTG-TAGACTT---------------------------AATATCACATTT-CATCGAAGATAATT---ACAACGATGGTGAGTACG-ACTGAGATAA--AGTAC-AGCAGGT-CGGAC--------AAAATATAA---ACTCAAGGGTATTATAATA--------------CA---------ACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGGTTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGAACTGT----------------------------------------AAAAGCTATAAGGTTGA---------TACAGATTATAGAGACATAGACGCAGCGCAAGTTTGTTGACACATGTTGCCA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................TTCGTTAAAAAGT-----------------------------------------------------------------------AGAGATCTCAGGA.............................................................................................................................2611.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACGCAGCGCAAGTTTGTT................22200.0510010
............................................................................................................................................................................................................................................................................................................................................................................................................................AGACGCAGCGCAAGTTTG..................18200.0510010
dm3
AATGATTG-TAGACTT---------------------------AATATCACCTTT-TATCGAAGATAACT---ATAATGATGGTGAGTACG-ACTGAGATAA--AATAC-AGCAGGT-AGGAT--------AAAACATAA---ATTCA-GGGTATTATAATAATTATTGTTGTA--TA----ATTATACCCGTTACTCGTAGAGTAA-----AAGGGTATACTAGATTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGT--------------AACCCAGGTTGCCA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................AGTACG-ACTGAGATAA--AATAC-AGCAGG............................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T---ATAATGATGGTGAGTACG-ACTGAGA.............................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTT-TATCGAAGATAACT---ATAATGATGGT............................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGT--------------AA..............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGATTG-TAGACTT---------------------------AATATCACCT...........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGT--------------AACCCAGG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TATCGAAGATAACT---ATAATGATGGTGA..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TACG-ACTGAGATAA--AATAC-AGCAGG............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTCGTTAAAAAGTATGTAACAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGT--------------................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATAA--AATAC-AGCAGGT-AGGAT--------A............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................ATACTAGATTCGTTAAAAAGT.................................................................................................................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000300000000000000200000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000200000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTAGAT.............................................................................................................................................................................................................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACT.................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000020000000000000000030000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTAG...............................................................................................................................................................................................................................23200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000002000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCGTT........................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.........................................................................................................................................................................................................................TATACTAGATTCGTTAAAAAG..................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTAGA..............................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................TA----ATTATACCCGTTACTCGTAGAGT...................................................................................................................................................................................................................................................25160.2540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TACTCGTAGAGTAA-----AAGGGTATACTAGAT.............................................................................................................................................................................................................................29200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
.................................................................................................................................................................................................TACTCGTAGAGTAA-----AAGGGTATAC..................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCGTTAA......................................................................................................................................................................................................................23120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAA-----AAGGGTATACTAGATTCGTTAAAA....................................................................................................................................................................................................................2790.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................TACCCGTTACTCGTAGAGTAA-----AAGGGTA.....................................................................................................................................................................................................................................28200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
............................................................................................................................................................................................................................ACTAGATTCGTTAAAAAGTAT...............................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAA-----AAGGGTATACTAGATTCGTTA.......................................................................................................................................................................................................................24110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TA----ATTATACCCGTTACTCGTAGAGTAA-----A...........................................................................................................................................................................................................................................28120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................TACTAGATTCGTTAAAAAGTA................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................TAGAGTAA-----AAGGGTATACTAG...............................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATAC..................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAGA..............................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................................CCGTTACTCGTAGAGTAA-----AAGGGT......................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCGTTAAAAAG..................................................................................................................................................................................................................2780.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGATTCGTTAAA.....................................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGATTCGTTAAAA....................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................TA----ATTATACCCGTTACTCGTAGAG....................................................................................................................................................................................................................................................24180.1120000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GAGTAA-----AAGGGTATACTAGATTCGTTA.......................................................................................................................................................................................................................2790.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGATTCGT.........................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCGTTAAAAA...................................................................................................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATACCCGTTACTCGTAGAGT...................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................GTATACTAGATTCGTTAAAAAGT.................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TATACTAGATTCGTTAAAAAGT.................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AA-----AAGGGTATACTAGATTCGTT........................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000
................................................................................................................................................................................................TTACTCGTAGAGTAA-----AAGGGT......................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................TACCCGTTACTCGTAGAGTA..................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTA................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCGTTA.......................................................................................................................................................................................................................22130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................A--TA----ATTATACCCGTTACTCGT........................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................A--TA----ATTATACCCGTTACTCG.........................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTA.......................................................................................................................................................................................................................21160.0610000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTATACTAGATTCGTTAAAAAGTAT...............................................................................................................................................................................................................25170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AGGGTATACTAGATTCGTTAA......................................................................................................................................................................................................................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTATACTAGATTCGTTAAAAAGTA................................................................................................................................................................................................................24170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAGATTCGTTAAAAAGTATGTA............................................................................................................................................................................................................22180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TA----ATTATACCCGTTACTCGTAGA.....................................................................................................................................................................................................................................................23190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................GGTATACTAGATTCGTTAAAAAG..................................................................................................................................................................................................................23190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................TACTAGATTCGTTAAAAAGTATGT.............................................................................................................................................................................................................24190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTATACTAGATTCGTTAAA.....................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................ATACCCGTTACTCGTAGAGTAA-----AAGG........................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ACTCGTAGAGTAA-----AAGGGTAT....................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAGAT.............................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CCCGTTACTCGTAGAGTAA-----AAGGGT......................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAA-----AAGGGTATACTAGATTC...........................................................................................................................................................................................................................20200.0510000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TACCCGTTACTCGTAGA.....................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGAGTAA-----AAGGGTATACTAGATTCGTT........................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................TTATACCCGTTACTCGTAGAGTAA-----AAGGG.......................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CCGTTACTCGTAGAGTAA-----AAGGGC......................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TACTCGTAGAGTAA-----AAGGGTA.....................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAGATTCGTTAAAAAGTATGT.............................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTAGATTC...........................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A-----AAGGGTATACTAGATTCG..........................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCGTAGAGTAA-----AAGGGTATACTAG...............................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................TATACCCGTTACTCGTAGA.....................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATTCGTTAAAAAGTATGTAAC..........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GTAA-----AAGGGTATACTAGAT.............................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTATACCCGTTACTCGTAGAGT...................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAA-----AAGGGTATACTAGATTCGT.........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................GTAGAGTAA-----AAGGGTATACTA................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TA----ATTATACCCGTTACTCGTA.......................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GAGTAA-----AAGGGTATACTAGATTCGTT........................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................TAA-----AAGGGTATACTAGATTCG..........................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................TA----ATTATACCCGTTACTCGT........................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CGTAGAGTAA-----AAGGGTATACTAGATT............................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTCGTTAAAAAGTATGTAACA.........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTATACTAGATTCGTTAAAAA...................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACCCGTTACTCGTAGAGTAA-----............................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ACTCGTAGAGTAA-----AAGGGTATA...................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................AAGGGTATACTAGATTCGTT........................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTAGATTCGTTAAAAAGTATG..............................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................A----ATTATACCCGTTACTCGTAGA.....................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................AGGGTATACTAGATTCGT.........................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
GATGTTAA-ACAGAAT---------------------------AATGACTTTCTG-TTACGG---CGAGT---GCAATGAAAGCAAAT------------AA--AACGC-AGCACTA-TAGAT--------AATATTTAT---CC--------ATTACAACA--------------CAACGTTTTATACCCGTTACTCGTTCAGTAA-----GAGGCTATACTAGATACGTTTAAAAGTTTGTAACAGG---CAGAAGGAAGCGTTTCCGACCATATAAAGT--------------------------------------------ATATGTATATATTCTTGATCAG-----------------------GTTTAGAAGGTTTAGACTAAGCATGCCGCTTCTAGACACGTAGACGCATCGCAAGTTTTATTTTAAATGTTGCCA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................ATACTAGATACGTTTAAAAGTTTGT.............................................................................................................................................................................................................2511.0010000100
droYak3
TTCATCGA-GCATGCA-----------AATATCGATGG--GCC----------------------------------------TAGATGGG-ACT-AGATAA--ATTCCAAGCAATT-CGAAT--------AAAGCATTC---CCTCT-G--------------------------------GTTATAACTGTTACT--------------------------TGACTCGTTGAAAAGTATGCAAAAGG---TAGATGAAATCGTTTCCGACCGTATAAAGT--------------------------------------------ACA----TATATTCTTGATCAGGATCAAAAGACGGGTGGATCTGGCCCTAGAAAGTTGAGATTAAGCATACAGACTCCCAAGACATAGAAGCAGCGCAAGTTTGTCGATTCATGTTGCCA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................TAGAAAGTTGAGATTAAGCATACAGAC...............................................27200.9018018000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAAGACATAGAAGCAGCGCAAGTT....................27200.25505000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGATTAAGCATACAGACTCCCAAGACA.....................................29200.10202000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGATTAAGCATACAGACT..............................................20200.10200200000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAGTTGAGATTAAGCATACAGACTCC............................................26200.10200200000000
.......................................................................................................................................................................................................................................................................GTTTCCGACCGTATAAAGT--------------------------------------------..........................................................................................................................19180.06100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGAGATTAAGCATACAGACTCCC...........................................24200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAAGCAGCGCAAGTTTGTCGATT............27200.05100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGTTTGTCGATTCATGTTGCC...26200.05100010000000
....................................................................................................................................................................................................................................................................................TAAAGT--------------------------------------------ACA----TATATTCTTGATCAGGA..................................................................................................26200.05100000000001
droEug1
TTA-----------------------------------------ATACCACATTA-TAAAGCCAATAGTA---ACGAA----GTAAATAAG-AAAAAAATGT--ATT-------------AGA--------AAAATATAT---ATTC-------------------------CA--CC---------ATCGTAAACTCATTGGGTAAATCTAAGGAATATGCCAGTCTCGATCATGCGTTCGT-------------------------------------------------------------------GGAGAGATCAATA---GC----------------------------------------GAAGTCGATTGAGTTGAGTTTAGGCATGAATATTCTTGAGGTCTCTGGACAGCGCAAGTTTATTTCAGCATCCTGCCG--SizeHit CountTotal NormTotal
No Reads
droBia1
AAGCATAG-AAGGTTA---------------------------TGTGTTAAAAA---------------------------------------------------------GCACC-------------------------------AAAGATATT--------------------------ATTATACCCGTTACTCGGAGAGCAA-----AGGGGTATACTAGATTCTTCAGAGAGTATGTAACGGG---TAAAAGGAAGCTTTTCCAACCCCATAAAGT--------------------------------------------AAA----TATATTCTTGATCAG--------------------------------------------------------------GATCACTATGATCAGGATCATT--ATAATGGTGCCA--SizeHit CountTotal NormTotal
No Reads
droTak1
AATGGCTCATAGGCTTTGATTGAATCAAATTACGATGGAACCT----------------------------------------TAAATGCA-ATTATGTAAG--AGG----GCATC-------------------------------TAAGATATT--------------------------TTTATACCCGTTACTCGTAGAGTAA-----AAGGGTGTTTTGTATTCGAGCAAAAGTATGTAACAG-------------------------------------------------------------CTGAGATCTCGGAAACTAC----------------------------------------AAAAGCTAGAAGGTTGAGATTTCCCACACATATTCTTGGGCTTCCTACTCAGCGCAAGTTTATTTCAGCCGAGCGCCA--SizeHit CountTotal NormTotal
No Reads
droEle1
AAAAATAT-TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCCGTTACTCGTAGAGTAA-----AACAGTATATTGTTATCGGTCTAG-CCATGTTA---------------------------------------------------ATCTGTAAGAACGTCGAGATCTAGGAAACTAT----------------------------------------AAAAGACTTAAGATTT------------AAAATTCTAGTATTTCCTACGCAACGCAAGTTTATTTGAAAATGGAGCCA--SizeHit CountTotal NormTotal
No Reads
droRho1
AATGCTTG-TAGTCTTTGTCT----------------------AATAGCACATTTTCGTCCAAAATTATTATTAAAATTATCATAATTACT-AACGCAATCATTAATCC-AGCATGCCCGGACATATGATGGAAATACAGATCTTTCA-AGTTGTAATGATGTTCTTTCATGTATTTA----ATTATACTCGTTACTCGTAGAGTAA-----AAGGGTATATTGTATTCGTGC-AAAGTATGTAACCGTATGAGTATGACCGTCTGTCCGTCTGTCTG---TCCGTCTGTCTCTCTGTCCGTATGAACGCTGAGATCTCGGAAACTAT----------------------------------------AAAAGCTAGAAGATTGGCATTTTGCATGTAGATTTTAGGAGTTCCTACGCAGCGCAAGTTTGTTTCAAAATGGTGCCA--SizeHit CountTotal NormTotal
No Reads
droFic1
GTCCGTAT-TAAAGTC---------------------------GAGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGGAACTGC----------------------------------------AGGAACTAGAATATTGGGATTAAAACTGTAGATACTTATTATTCTTACGCAGTGCAAGTTTGTTAAATTGTTTTGCCA--SizeHit CountTotal NormTotal
No Reads
droKik1
CATGATTG-TGGACTT---------------------------GATATCGCCACT-TATCGAGGAGAACT---ACAACGATGGC---TACA-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG--SizeHit CountTotal NormTotal
No Reads
droAna3
AATGATTG-TTGATTT---------------------------GATTTCGCCGAT-AATCGAGGAGAACT---ATAATGATGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTCCGTAT-AAACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGGATCTCAGAAACTATATGA------------------------------------AAAATCTATAGGATT------TGGCGTGGAGACTCTAC-AATGCCCACGCTGTTCAAGTTTGTTTCAAAATTTTTCCA--SizeHit CountTotal NormTotal
No Reads
dp5
AATGATTG-TGGATCT---------------------------AATATCACCTAT-AATTGAGGAAAACT---ACAATGATGGTATGTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AATGATTG-TGGATCT---------------------------AATATCACCTAT-AATTGAGGAAAACT---ACAATGATGGTATGTGTGGATTGTCCCAA--GCTGT-AATTACT-CGTAT--------ATAGCA-AA---ACTCATCGATTTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTACA------------------A--CTGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GTCCGTAT-GAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGATCTCAGAGACTGT----------------------------------------AAAAGCCACCAAATTTGG------TAT-TAGACTCGTGTAGTATGTAAAGTGATCAAGTTTAATTTAAATTTTTGCCA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGTAGTATGTAAAGTGATCAAGTT....................27200.10202000
droVir3
AATGATTG-TCGATCT---------------------------GATCTCTCCCCT-GATCGAGGAGAACT---ACAATGATGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AATGATTG-TGGATCT---------------------------GATCTCGCCGCT-CATCGAGGAGAACT---ACAATGATGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AATGATTG-TCGATCT---------------------------GATATCCCCACT-CATTGAGGAGAATT---ATAATGATGGTAAGTATA-AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:29 PM