ID:

dsi_7520

 Coordinate:

2r:11347209-11347288 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.7 -14.5 -14.3

Flybase annnotation

exon [2r_11347289_11347568_+]; CDS [2r_11347289_11347501_+]; CDS [2r_11347080_11347208_+]; exon [2r_11347022_11347208_+]; intron [2r_11347209_11347288_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------##################################################
AGCAGAGCTCCAATCCCTACCGTCATGCCACTGGCGAGGGCGGCACCGTGGTAAGTGGGAGCAGCAATGCTTGGCTTGGTTATGTCATCACTATGTGGAATAAATGCTATTAAACCGCTGTACGTTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGA
**************************************************(((((((((((((....)))))(((....((((.((((......)))).))))..)))......))))).))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
..........CAATCCCTACCGTCATGCCACTGGC................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0
..................................................................ATGCTTGGCTTGGTTATGTCA............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.................TACCGTCATGCCACTGGC................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1
.............................................................................................................................TGCAGTTCGACGCGGGATTAG.................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0
.......CTCCAATCCCTACCGTCATGC........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........CAATCCCTACCGTCATGCCAC..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................TGCCACTGGCGAGGGCGGCACCGT................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................................CGTGGTAAGTGGGAGCAGCAA................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................GCGGGATTAGCCCGTTTCCAGGCGATTC................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................GGCGGCACCGTGGTAAGTGGG......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................GGGCGGCAGCGTGGGAAGTGGC......................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................GTTCGATGCGGGATTAGCCCGTTT........................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
......GCTCCAATCCCTACCGTCATGCCACT.................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................GCACCGTGCTAAGTGG.......................................................................................................................... 16 1 1 1.00 1 0 0 0 0 1 0 0 0
..............................................................................................................................................TTAGCCCGTTTCCAGGCGATGCGAG............. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
AGCAGAGCTCCAATCCCTACC............................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
........TCCAATCCCTACCGTCATGCCACTGGC................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................AGCCCGTTTCCAGGCGAGGCG............... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................GTACCGTGCTAAGTGGG......................................................................................................................... 17 2 4 0.50 2 0 0 0 0 2 0 0 0
.............................ACTGACGAGGGCGGC........................................................................................................................................ 15 1 3 0.33 1 0 0 0 0 1 0 0 0
...................................GAGGGCGGCACCGTGT................................................................................................................................. 16 1 3 0.33 1 0 0 0 0 0 1 0 0
......................................................GTGTGAGCAGCAATGCT............................................................................................................. 17 1 4 0.25 1 0 0 0 0 0 1 0 0
...................................................................................................................................TCGATGCGGGATGAACC................................ 17 2 5 0.20 1 0 0 0 0 0 0 1 0
..................................................GTAGGTGGGAGTAGCAAT................................................................................................................ 18 2 5 0.20 1 0 0 1 0 0 0 0 0
.................................................CGTAGGTGGGAGTAGCAAT................................................................................................................ 19 3 17 0.12 2 0 0 2 0 0 0 0 0
.........................................GGGACCGTGCTAAGTGG.......................................................................................................................... 17 2 12 0.08 1 0 0 0 0 1 0 0 0
...................................................................TGCTTGGATTGATTACGTC.............................................................................................. 19 3 19 0.05 1 0 0 0 0 0 1 0 0
............................................................................................................................................GATTAGGACGTTGCCAGGC..................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0
...............................................................................................................................................TAGGACGTTTCCAGGC..................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0
...................................................TAAGTGGGAGCCGGAA................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCGTCTCGAGGTTAGGGATGGCAGTACGGTGACCGCTCCCGCCGTGGCACCATTCACCCTCGTCGTTACGAACCGAACCAATACAGTAGTGATACACCTTATTTACGATAATTTGGCGACATGCAACGTCAAGCTACGCCCTAATCGGGCAAAGGTCCGCTACGCTCAGAGGTTGATGCT
**************************************************(((((((((((((....)))))(((....((((.((((......)))).))))..)))......))))).))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................................................GGCAAAGGTCCGCTACGCTCA............ 21 0 1 4.00 4 3 1 0 0 0 0
..........TTTAGGGATGGCAGTACGGTGA.................................................................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
......CGAGGTTAGGGATGGCAGTAC......................................................................................................................................................... 21 0 1 3.00 3 2 0 0 1 0 0
........................................................................................................................................................AGGTCCGCTACGCTCAGAGGT....... 21 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................................................................CCGCTACGCTCAGAGGTTGATG.. 22 0 1 2.00 2 0 0 0 1 1 0
.........................................................................................................................................................GGTCCGCTACGCTCAGAGGTT...... 21 0 1 2.00 2 0 0 2 0 0 0
...........TTAGGGATGGCAGTACGG....................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........TTAGGGATGGCAGTACGGTGAC................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...........TTTGGGATGGCAGTACGGTGAC................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........ATTAGGGATGGCAGTACGGTGA.................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........CTTTTGGGATGGCAGTACGGTGA.................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..........TTTTGGGATGGCAGTACGGTGAC................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................TGTCCGCTACGCTCAGAGGTTG..... 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................AAGGTCCGCTACGCTCAGAGG........ 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................TTTGCTACGCTCAGAGGTTGATG.. 23 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................GCTACGCTCAGAGGTTGATG.. 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................TCCGCTACGCTCAGAGGTTGA.... 21 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................TGCTACGCTCAGAGGTTGATG.. 21 1 1 1.00 1 1 0 0 0 0 0
............AAGGGATGGCAGTACGGTGAC................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................ATTGCTACGCTCAGAGGTTGATG.. 23 3 1 1.00 1 1 0 0 0 0 0
.......TAGGTTAGGGATGGCAGTACG........................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................CGCTACGCTCAGAGGTTGAT... 20 0 1 1.00 1 1 0 0 0 0 0
.......GAGGTTAGGGATGGCAGTAC......................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........ATTAGGGATGGCAGTACGGTGAC................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................GTCCTCTACGCTCAGAGGTTG..... 21 1 1 1.00 1 1 0 0 0 0 0
.......TTGGTTAGGGATGGCAGTACG........................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
.........AGTTAGGGATGGCAGTACG........................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
............TAGGGATGGCAGTACGGTGAC................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................GCAAAGGTCCGCTACGCTCAG........... 21 0 1 1.00 1 0 1 0 0 0 0
.CGTCTCGAGGTTAGGGATGGC.............................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...........ATTTGGATGGCAGTACGGTGA.................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0
.......GAGGTTAGGGATGGCAGTACG........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.........ATTTAGGGATGGCAGTACGG....................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
........AGGTTAGGGATGGCAGTACGG....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
TCGTCTCGAGGTTAGGGATGGCA............................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
...........ATAGGGATGGCAGTACGGTG..................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.............AGGGATGGCAGTACGGTGA.................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
............TAGGGATGGCAGTACGGTGGC................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................TTTGGTCCGCTACGCTCAGAG......... 21 3 3 0.33 1 1 0 0 0 0 0
..........TTAAGGGATGGCAGTACG........................................................................................................................................................ 18 2 4 0.25 1 1 0 0 0 0 0
.....AAAAGGTTAGGGATGGCAGT........................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0
........TTTTTAGGGATGGCAGTACG........................................................................................................................................................ 20 3 9 0.11 1 1 0 0 0 0 0
...............................................................................AATACAGTACTGATAAA.................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:11347159-11347338 + dsi_7520 AGCAGAGCTCCAATCCCTACCGTCATGCCACTGGCGAGGGCGGCACCGTGGTAAGTGGGAGCAGCAA-----T--G--CTTGGCTTGGTTATGTCATCACT--A------TGTG-GAATAAAT------------------GCTATTAAAC----CGCT-----------GTACG-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGA
droSec2 scaffold_1:8162238-8162417 + AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--G--CTTGGCTTGGTTATGTCATCACT--A------TGTG-TAATAAAT------------------ACTATTAAAC----CGCT-----------GTACA-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGA
dm3 chr2R:10644169-10644348 + AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTTGTAAGTGGTAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--T------TGAG-GAATAAAT------------------ACTATTAAAC----CGCT-----------TTAAA-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGA
droEre2 scaffold_4845:15201158-15201337 - AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACA--A------TGCG-GGCTAAAT------------------GCTATTAAAC----CGCT-----------TTACA-TTGCAGTTCGATGCGGGATTGGCCCGTTTCCAGGCGATGCGCGTCTCCAACTATGA
droYak3 2R:10578465-10578644 + AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--T------TGTG-GAATAAAT------------------GCTATTAAAT----CGCT-----------TTACA-TTGCAGTTCGATGCGGGATTGGCCCGTTTCCAAGCGATGCGCGTCTCCAACTATGA
droEug1 scf7180000409462:2183449-2183621 - AACAGAGCTCGAATCCTTATCGTCATGCCACCGGCGAGGGCGGTACCGTGGTAAGTGGGATCACCAA-----T--C--C-----TTGGTTATGTCATCACG--C------T--G-AGAAATAT------------------GCTATTAATC----CGCT-----------TTGCA-TTCCAGTTCGATGCAGGATTGTCCCGGTTCCAGGCGATGCGCGTTTCCCATTTCGA
droBia1 scf7180000301754:1983798-1983983 - AGCAGAGCTCCAATCCCTACCGCCATGCCAGCGGCGAGGGCGGCACCGTGGTAAGTGGGCACGCCAA-----T--C--CCCGGCTTGGTTATGTCATCATG--C------T--G-GCAGAGAT------------------GCCATTAATC----CACCTC---CTCCATGCCCA-TTTCAGTTCGATGCGGGATTGGCTCGCTTCCAGGCGATGCGTGTCTCCAACTACGA
droTak1 scf7180000415627:416709-416878 - AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTC-----ATCA------------------TTGGTTATGTCATCATGCGC------T--GCGGATAAAT------------------GCCATTAATC----CACT---------ATGCACATCTCCAGTTCGACGCGGGATTGGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGA
droEle1 scf7180000491349:188763-188940 - AGCAGAGCTCCAATCCCTATCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTAGGAACACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--A------T--G-GGATAAAT------------------GCGATTAATA----CCCT-----------GTGCT-TTGCAGTTTGATGCGGGATTAGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGA
droRho1 scf7180000777695:167491-167667 - AGCAGAGCTCGAATCCCTATCGTCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAATACCAA-----T--C--CTTGGCTTGGTTATGTCATCACA--A------T--G-GGATAATT------------------GCGATTAACA----CACT-----------GT-CT-TTGCAGTTCGATGCCGGATTATCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGA
droFic1 scf7180000453778:592431-592608 - AGCAGAGCTCCAATCCCTATCGCCATGCCACAGGCGAGGGCGGCACCGTGGTAAGTTGGAGCGCCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--C------T--G-GGATAAAT------------------GCTAGTAATT----AATC-----------TTGCC-TTCTAGTTCGACGCGGGATTAGCCCGTTTCCAGGCGATGCGTGTCTCCAACTACGA
droKik1 scf7180000302470:1428416-1428601 - AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAAGGCGGCACCGTGGTGAGTGGAAGAGCCAA-----TA-ACTCTCGGCTTGGTTATGTCATCACGC-C------T--G-GGATACAT------------------GCTATTAATT---CCGCT-C---C----CGTTCC-CTCTAGTTCGATGCAGGATTGGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGA
droAna3 scaffold_13266:14762543-14762720 - AGCAAAGCTCCAATCCTTTCCGTCATGCCACCGGTGAAGGAGGCACTGTGGTAAGTGCGGAAACCGAGCCGAT--C--CTT----AGGTTATGTCATCAAG--A------CG-----ACGAAT------------------TTCACTGAGT----TTCT----------TACTTT-TTCCAGTTCGACGCAGGATTGTCCCGCTTCCAGGCTATGCGCGTGTCAAACTATGA
droBip1 scf7180000396428:63771-63948 + AGCAAAGTTCCAATCCTTTCCGCCATGCCACCGGTGAAGGAGGCACTGTGGTAAGTGCGAAAATCGAGTCGAT--C--CTT----AGGTTATGTCATCAAG--A------CG-----ATGAAT------------------TTCACCGAGT---TTTA-----------AATGTT-TTCCAGTTCGACGCAGGATTGTCCCGCTTCCAGGCTATGCGCGTGTCAAACTATGA
dp5 3:5308292-5308465 + AACAGAGCTCGAATCCCTTCCGCCATGCCACAGGCGAAGGCGGCACTGTGGTATGTGAA--AACCAA-----TCTC--CTTTCAATGGTTATGTCATCAGG--C------T--G-GGATAAAT---------------------ATTAATT----TCCT------------CGTT-TTGCAGTTCGATGCCGGCCTAGCCCGCTTCCAGGCTATGCGTGTGTCCAACTACGA
droPer2 scaffold_2:5513488-5513662 + AACAGAGCTCGAATCCCTTCCGCCATGCCACAGGCGAAGGCGGCACTGTGGTATGTAAAA-AACCAA-----TCTC--CTTTCAATTGTTATGTCATCAGG--C------T--G-GGATAAAT---------------------ATTAATT----TCCT------------CGTT-TTGCAGTTCGATGCCGGCCTAGCCCGCTTCCAGGCTATGCGTGTGTCCAACTACGA
droWil2 scf2_1100000004512:1370134-1370317 + AGCAAAGCTCGAATCCTTTCCGTCATGCCACTGGCGAGGGCGGCACAGTGGTAAGCAAGA-CTCAAA-----T--C--CTTA--TGGGTTATGTCATCAAC--TCAAAATCG-----CTGAAT------------------GTTTTCACTTAATTTTCC----------TCTTTT-TTTTAGTTCGATGCTGGTCTGGCTCGCTTCCAGGCCATGCGTGTGTCTAACTTTGA
droVir3 scaffold_12875:10540150-10540327 - AGCAGAGCTCGAATCCGTTTCGCCATGCCACCGGAGAGGGCGGCACTGTGGTATGCA------CAAT-----T--G--------CTGGTTATGTCATCACTGGC--------------CAAATA---ATAACACATATAGTATTATTAATC-----ACT----------TGATTT-TTGCAGTTTGATGCCGGTCTAGCGCGCTTCCAGGCCATGCGTGTGTCAAACTATGA
droMoj3 scaffold_6496:16437178-16437355 + AGCAGAGCTCCAATCCTTTCCGTCATGCCACTGGAGAGGGCGGCACTGTGGTAAGTGCCA------A-----A--T-------AATGGTTATGTCATCACATGCCAGCATTTTG-G----AATGCTC--------------AATAATAAAT----A--T-TTACT----T---GA-TTGCAGTTCGATGCTGGCCTAGCCCGTTTCCAGGCCATGCGCGTCTCACACATTGA
droGri2 scaffold_15245:3659765-3659949 - AGCAGAGCTCGAATCCTTTTCGCCATGCCACCGGCGAGGGCGGCACTGTGGTATGTCTAC---------GGAT--T--T----GCTGATTATGTCATCACTGCCCAGTTTTA-----TTAATT------------------GTTTAAAATAT---A--T-ATAATTCTATGCCCT-TCCAAGTTCGATGCTGGTCTAGCTCGCTTCCAGGCCATGCGTGTGTCTAACTACGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCAGAGCTCCAATCCCTACCGTCATGCCACTGGCGAGGGCGGCACCGTGGTAAGTGGGAGCAGCAA-----T--G--CTTGGCTTGGTTATGTCATCACT--A------TGTG-GAATAAAT------------------GCTATTAAAC----CGCT-----------GTACG-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........CAATCCCTACCGTCATGCCACTGGC.....................................................................................................................................................................................................2511.00100000010000000000
..................................................................A-----T--G--CTTGGCTTGGTTATGTCA........................................................................................................................................2111.00100000001000000000
.................TACCGTCATGCCACTGGC.....................................................................................................................................................................................................1811.00100100000000000000
.......CTCCAATCCCTACCGTCATGC............................................................................................................................................................................................................2111.00100000000000001000
..........CAATCCCTACCGTCATGCCAC.........................................................................................................................................................................................................2111.00100000000000001000
.........................TGCCACTGGCGAGGGCGGCACCGT.......................................................................................................................................................................................2411.00100000000001000000
..............................................CGTGGTAAGTGGGAGCAGCAA-----................................................................................................................................................................2111.00100000000000001000
......................................GGCGGCACCGTGGTAAGTGGG.............................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................GTTCGATGCGGGATTAGCCCGTTT...........................2411.00100010000000000000
......GCTCCAATCCCTACCGTCATGCCACT........................................................................................................................................................................................................2611.00100010000000000000
..................................................................................................................................................................................................TTAGCCCGTTTCCAGGCGATGCGAG.............2511.00100000000000100000
AGCAGAGCTCCAATCCCTACC...................................................................................................................................................................................................................2111.00100000001000000000
........TCCAATCCCTACCGTCATGCCACTGGC.....................................................................................................................................................................................................2711.00100010000000000000
...................................GAGGGCGGCACCGTGT.....................................................................................................................................................................................1630.33100000000001000000
droSec2
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--G--CTTGGCTTGGTTATGTCATCACT--A------TGTG-TAATAAAT------------------ACTATTAAAC----CGCT-----------GTACA-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................GTTTCCAGGCGATGCGAGT............1914.0040040
....................................................................................................................................................................................................................ATGCGAGTCTCCAACTACGA2012.0021010
.................................................................................................................................................................................................ATTAGCCCGTTTCCAGGCGATGCGAGT............2711.0010010
...........................................................................................................................................................................................................TTCCAGGCGATGCGAGTC...........1811.0010010
..CAGAGCTCCAATCCCTACCGCCATGC............................................................................................................................................................................................................2611.0010010
...........................................................................................................................................................................................................TTCCAGGCGATGCGAGTCTC.........2011.0010010
..........................................................................................................................T------------------ACTATTAAAC----CGCT-----------GTACA-TTGCAG..................................................2611.0010100
........................................................................................................................................................................................CGATGCGGGATTAGCCCGTTT...........................2111.0010010
........................................CGGCACCGTGGTAAGTGGG.............................................................................................................................................................................1911.0010001
.......................CATGCCACCGGCGAGGGCGGCACC.........................................................................................................................................................................................2411.0011000
...........................................CACCGTGGTAAGTGGGAG...........................................................................................................................................................................1811.0011000
............................................................................................................................................................................................................TCCAGGCGATGCGAGTCTCCA.......2111.0011000
....GAGCTCCAATCCCTACCGCCATG.............................................................................................................................................................................................................2311.0011000
.............................ACCGGCGAGGGCGGCACCGT.......................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................................................TTCCAGGCGATGCGAGTCT..........1911.0010010
.......................................GCGGCACCGTGGTAAGTGGG.............................................................................................................................................................................2011.0010100
.....................GCCATGCCACCGGCGAGGGCGG.............................................................................................................................................................................................2211.0010010
................................................................................................................................................................................................GATTAGCCCGTTTCCAGGC.....................1911.0010010
.....................................................................................................................ATAAAT------------------ACTATTAAAC----CGCT-----------G.............................................................2111.0010100
..................................................GTAAGTGGGAGCACCAA-----T--G--C.........................................................................................................................................................2011.0010100
........................ATGCCACCGGCGAGGGCGGCACCGT.......................................................................................................................................................................................2511.0010010
dm3
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTTGTAAGTGGTAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--T------TGAG-GAATAAAT------------------ACTATTAAAC----CGCT-----------TTAAA-TTGCAGTTCGATGCGGGATTAGCCCGTTTCCAGGCGATGCGAGTCTCCAACTACGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................TGCGGGATTAGCCCGTTT...........................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
............................................................................................................................................................................AAA-TTGCAGTTCGATGCGGGA......................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................AC----CGCT-----------TTAAA-TTGCAGT.................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTTTCCAGGCGATGCGAGTCTCCAAC.....2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AGTTCGATGCGGGATTAG..................................1812.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCAGTTCGATGCGGGATTAGC.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000
.....................................................................................................................................................................................GTTCGATGCGGGATTAGCCCG..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................AGTTCGATGCGGGATTAGCCCG..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TGCGGGATTAGCCCGTTTCCAGGCGATG.................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.................................................................AA-----T--C--CTTGGCTTGGTTATGTC.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000
.GCAGAGCTCCAATCCCTACCGC.................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000
........................ATGCCACCGGCGAGGGCG..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................A-----T--C--CTTGGCTTGGTTATGTC.........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAGAGCTCCAATCCCTACCGC.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTTTCCAGGCGATGCGAGG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................CGCCATGCCACCGGCGAGGGC...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TGCGGGATTAGCCCGTTTCC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TGGTTATGTCATCACG--T------TGAG-GAATAAA..............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACCGGCGAGGGCGGCACC.........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AGCCCGTTTCCAGGCGATGCGAGTC...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTTCCAGGCGATGCGAGTCTC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................TTGTAAGTGGTAGCACCAA-----T--C--..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TAAA-TTGCAGTTCGATGCGGG.......................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTTTCCAGGCGATGCGAGT............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.GCAGAGCTCCAATCCCTACCGCCAT..............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................CGTTTCCAGGCGATGCGAGTCTCC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CGCT-----------TTAAA-TTGCAGTTCGATGCG.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCATGCCACCGGCGAGGGCG..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TTCCAGGCGATGCGAGTCTCA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..CAGAGCTCCAATCCCTACCGCCATG.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................CGCCATGCCACCGGCGAGGGCGGC............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................CCGTTTCCAGGCGATGCGAGT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TTCCAGGCGATGCGAGTCTCCAACT....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGGTAGCACCAA-----T--C--CTTGGCT...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................CACCGTTGTAAGTGGTAGC..........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTCCAATCCCTACCGCCA...............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCACCGGCGAGGGCGGCACCGTTA.....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAGAGCTCCAATCCCTACCGCC................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTGGTAGCACCAA-----T--C--CTTGGC....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTAGCCCGTTTCCAGGCGATGCGAG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCATGCCACCGGCGAGGGCGGC............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........................................................................................TTATGTCATCACG--T------TGAG-GA...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................TTGGTTATGTCATCACG--T------TGA.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CATGCCACCGGCGAGGGCG..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGAGCTCCAATCCCTACCGCCA...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CATGCCACCGGCGAGGGCGGCA...........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCAGAGCTCCAATCCCTACC...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................A-TTGCAGTTCGATGCGGGAT.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
................CTACCGCCATGCCACCGGCGAGGGCG..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCATGCCACCGGCGAGGGCGG.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................TTGCAGTTCGATGCGGGATTAGC.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
AGCAGAGCTCCAATCCCTACCGCCA...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................GATTAGCCCGTTTCCAGGCGATGCGAG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTAGCACCAA-----T--C--CTTGGC....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTCCAATCCCTACCGCCATGC............................................................................................................................................................................................................2111.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGTGGTAGCACCAA-----T--C--CTTG......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................GCCATGCCACCGGCGAGGGCGG.............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TACCGCCATGCCACCGGCGAGGGC...............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................GTTATGTCATCACG--T------TGAG-GA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCATGCCACCGGCGAGGGC...............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AGGCGATGCGAGTCTCCA.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..............................CCGGCGAGGGCGGCACCGTTG.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
......................................................................................................................................................................................TTCGATGCGGGATTAGCCCGTTTCCAGG......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCCCTACCGCCATGCCACCGGCGAG..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACA--A------TGCG-GGCTAAAT------------------GCTATTAAAC----CGCT-----------TTACA-TTGCAGTTCGATGCGGGATTGGCCCGTTTCCAGGCGATGCGCGTCTCCAACTATGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................GTTTCCAGGCGATGCGCGT............1913.0030100020
.....................................................................................................................................................................................GTTCGATGCGGGATTGGCCC...............................2012.0020200000
........TCCAATCCCTACCGCCATGCCACCGGCG....................................................................................................................................................................................................2811.0011000000
.....................................................................................................................................................................................GTTCGATGCGGGATTGGCC................................1911.0010000100
....GAGCTCCAATCCCTACCGCC................................................................................................................................................................................................................2011.0010100000
AGCAGAGCTCCAATCCCTACCGC.................................................................................................................................................................................................................2311.0010100000
..........................................................................................................................................................................................................TTTCCAGGCGATGCGCGTCTCCAACTAT..2811.0011000000
........................................................................................................................................................................................................CGTTTCCAGGCGATGCGCGT............2011.0011000000
....................CGCCATGCCACCGGCGAGGGC...............................................................................................................................................................................................2111.0010100000
...................................................................................................................................................................................................................GATGCGCGTCTCCAACTAT..1911.0010100000
...................................................................................................................................................................................................TGGCCCGTTTCCAGGCGATGCGCGT............2511.0010100000
.....................GCCATGCCACCGGCGAGGGCGGCA...........................................................................................................................................................................................2411.0010000100
..............CCCTACCGCCATGCCACCGGCGAG..................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................AGTTCGATGCGGGATTGG..................................1811.0011000000
.................TACCGCCATGCCACCGGCGAGGGCG..............................................................................................................................................................................................2511.0011000000
..............................................................................................................................................................................................................CAGGCGATGCGCGTCTCCA.......1911.0011000000
droYak3
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAGCACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--T------TGTG-GAATAAAT------------------GCTATTAAAT----CGCT-----------TTACA-TTGCAGTTCGATGCGGGATTGGCCCGTTTCCAAGCGATGCGCGTCTCCAACTATGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................CCGGCGAGGGCGGCACCGTGT.....................................................................................................................................................................................2111.00100000010000
........TCCAATCCCTACCGCCATGCCACCGGCG....................................................................................................................................................................................................2811.00101000000000
..........................................................................................................................................................................................ATGCGGGATTGGCCCGTTT...........................1911.00101000000000
..............................................................................................................................................................................................................CAAGCGATGCGCGTCTCCAACT....2211.00101000000000
........................................................................................................................................................................................................CGTTTCCAAGCGATGCGCGTCTCC........2411.00100100000000
.......................CATGCCACCGGCGAGGGCGGCAC..........................................................................................................................................................................................2311.00101000000000
AGCAGAGCTCCAATCCCTACCGCC................................................................................................................................................................................................................2411.00100000010000
.GCAGAGCTCCAATCCCTACCGC.................................................................................................................................................................................................................2211.00100000010000
............................................................................................................................................................................................................TCCAAGCGATGCGCGTCTCCAACTATG.2711.00100000010000
.......................................................................................................................................................................................TCGATGCGGGATTGGCCCGTT............................2111.00101000000000
.............................ACCGGCGAGGGCGGCACCGT.......................................................................................................................................................................................2011.00101000000000
.......................CATGCCACCGGCGAGGGCGGCACC.........................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................TGCGGGATTGGCCCGTTTCCAAGCGA...................2611.00101000000000
.....................................................................................................................................................................................GTTCGATGCGGGATTGGCCC...............................2011.00100100000000
droEug1
AACAGAGCTCGAATCCTTATCGTCATGCCACCGGCGAGGGCGGTACCGTGGTAAGTGGGATCACCAA-----T--C--C-----TTGGTTATGTCATCACG--C------T--G-AGAAATAT------------------GCTATTAATC----CGCT-----------TTGCA-TTCCAGTTCGATGCAGGATTGTCCCGGTTCCAGGCGATGCGCGTTTCCCATTTCGASizeHit CountTotal NormTotal
No Reads
droBia1
AGCAGAGCTCCAATCCCTACCGCCATGCCAGCGGCGAGGGCGGCACCGTGGTAAGTGGGCACGCCAA-----T--C--CCCGGCTTGGTTATGTCATCATG--C------T--G-GCAGAGAT------------------GCCATTAATC----CACCTC---CTCCATGCCCA-TTTCAGTTCGATGCGGGATTGGCTCGCTTCCAGGCGATGCGTGTCTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droTak1
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTC-----ATCA------------------TTGGTTATGTCATCATGCGC------T--GCGGATAAAT------------------GCCATTAATC----CACT---------ATGCACATCTCCAGTTCGACGCGGGATTGGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droEle1
AGCAGAGCTCCAATCCCTATCGCCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTAGGAACACCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--A------T--G-GGATAAAT------------------GCGATTAATA----CCCT-----------GTGCT-TTGCAGTTTGATGCGGGATTAGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droRho1
AGCAGAGCTCGAATCCCTATCGTCATGCCACCGGCGAGGGCGGCACCGTGGTAAGTGGGAATACCAA-----T--C--CTTGGCTTGGTTATGTCATCACA--A------T--G-GGATAATT------------------GCGATTAACA----CACT-----------GT-CT-TTGCAGTTCGATGCCGGATTATCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGAGCTCCAATCCCTATCGCCATGCCACAGGCGAGGGCGGCACCGTGGTAAGTTGGAGCGCCAA-----T--C--CTTGGCTTGGTTATGTCATCACG--C------T--G-GGATAAAT------------------GCTAGTAATT----AATC-----------TTGCC-TTCTAGTTCGACGCGGGATTAGCCCGTTTCCAGGCGATGCGTGTCTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droKik1
AGCAGAGCTCCAATCCCTACCGCCATGCCACCGGCGAAGGCGGCACCGTGGTGAGTGGAAGAGCCAA-----TA-ACTCTCGGCTTGGTTATGTCATCACGC-C------T--G-GGATACAT------------------GCTATTAATT---CCGCT-C---C----CGTTCC-CTCTAGTTCGATGCAGGATTGGCCCGCTTCCAGGCGATGCGCGTTTCCAACTACGASizeHit CountTotal NormTotal
No Reads
droAna3
AGCAAAGCTCCAATCCTTTCCGTCATGCCACCGGTGAAGGAGGCACTGTGGTAAGTGCGGAAACCGAGCCGAT--C--CTT----AGGTTATGTCATCAAG--A------CG-----ACGAAT------------------TTCACTGAGT----TTCT----------TACTTT-TTCCAGTTCGACGCAGGATTGTCCCGCTTCCAGGCTATGCGCGTGTCAAACTATGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................GCTTCCAGGCTATGCGCGTGTC.........2213.003110001
........................................................................................................................................................................................................CGCTTCCAGGCTATGCGCGTGTCA........2412.002200000
...............................................................................................................................................................................................................AGGCTATGCGCGTGTCAAACTATG.2411.001000001
.......................CATGCCACCGGTGAAGGAGGC............................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................................................CCGCTTCCAGGCTATGCGC..............1911.001100000
.........................................................................................................................................................................................................GCTTCCAGGCTATGCGCGTGTCA........2311.001100000
........................ATGCCACCGGTGAAGGAG..............................................................................................................................................................................................1811.001100000
.....................GTCATGCCACCGGTGAAGGA...............................................................................................................................................................................................2011.001100000
...........................CCACCGGTGAAGGAGGCACTGTG......................................................................................................................................................................................2311.001010000
.....................................................................................................................................................................................GTTCGACGCAGGATTGTCCCGCTTCC.........................2611.001100000
.......................CATGCCACCGGTGAAGGAGG.............................................................................................................................................................................................2011.001010000
.....................GTCATGCCACCGGTGAAGGAGG.............................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................CTTCCAGGCTATGCGCGTGTCAAACTA...2711.001100000
.....................................................................................................................................................................................GTTCGACGCAGGATTGTCCCGCT............................2311.001010000
..............CCTTTCCGTCATGCCACCG.......................................................................................................................................................................................................1911.001100000
............ATCCTTTCCGTCATGCCACC........................................................................................................................................................................................................2011.001100000
.......................CATGCCACCGGTGAAGGAGGCA...........................................................................................................................................................................................2211.001100000
..............CCTTTCCGTCATGCCACC........................................................................................................................................................................................................1811.001010000
...........................CCACCGGTGAAGGAGGCACTGT.......................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................TCCAGGCTATGCGCGTGTCAAACT....2411.001100000
...........................................................................................................................................................................................................TTCCAGGCTATGCGCGTGTCAAACT....2511.001100000
...................................................................................................................................................................................................................TATGCGCGTGTCAAACTATG.2011.001100000
............ATCCTTTCCGTCATGCCACCGGT.....................................................................................................................................................................................................2311.001001000
...........AATCCTTTCCGTCATGCCACCGGT.....................................................................................................................................................................................................2411.001010000
...AAAGCTCCAATCCTTTCCGT.................................................................................................................................................................................................................2011.001010000
....AAGCTCCAATCCTTTCCGTC................................................................................................................................................................................................................2011.001000001
......GCTCCAATCCTTTCCGTCATGCC...........................................................................................................................................................................................................2311.001100000
....AAGCTCCAATCCTTTCCGTCATGCC...........................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................................................CCAGGCTATGCGCGTGTC.........1811.001000100
......GCTCCAATCCTTTCCGTCAT..............................................................................................................................................................................................................2011.001100000
......................TCATGCCACCGGTGAAGGAGG.............................................................................................................................................................................................2111.001000010
.......................CATGCCACCGGTGAAGGAGGCACTGTGT.....................................................................................................................................................................................2811.001100000
droBip1
AGCAAAGTTCCAATCCTTTCCGCCATGCCACCGGTGAAGGAGGCACTGTGGTAAGTGCGAAAATCGAGTCGAT--C--CTT----AGGTTATGTCATCAAG--A------CG-----ATGAAT------------------TTCACCGAGT---TTTA-----------AATGTT-TTCCAGTTCGACGCAGGATTGTCCCGCTTCCAGGCTATGCGCGTGTCAAACTATGASizeHit CountTotal NormTotal
No Reads
dp5
AACAGAGCTCGAATCCCTTCCGCCATGCCACAGGCGAAGGCGGCACTGTGGTATGTGAA--AACCAA-----TCTC--CTTTCAATGGTTATGTCATCAGG--C------T--G-GGATAAAT---------------------ATTAATT----TCCT------------CGTT-TTGCAGTTCGATGCCGGCCTAGCCCGCTTCCAGGCTATGCGTGTGTCCAACTACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................CAGGCTATGCGTGTGTCC........1812.0020000110000
.......................CATGCCACAGGCGAAGGC...............................................................................................................................................................................................1811.0010100000000
.ACAGAGCTCGAATCCCTTCCGCCA...............................................................................................................................................................................................................2411.0010001000000
AACAGAGCTCGAATCCCTTCC...................................................................................................................................................................................................................2111.0010000000010
.........CGAATCCCTTCCGCCATGC............................................................................................................................................................................................................1911.0010100000000
........................ATGCCACAGGCGAAGGCGG.............................................................................................................................................................................................1911.0010100000000
.............................ACAGGCGAAGGCGGCACTGTG......................................................................................................................................................................................2111.0010000010000
......GCTCGAATCCCTTCCGCCATGCCA..........................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................................................................AGGCTATGCGTGTGTCCAACT....2111.0010001000000
...AGAGCTCGAATCCCTTCCGCCA...............................................................................................................................................................................................................2211.0010001000000
...AGAGCTCGAATCCCTTCCGCCATG.............................................................................................................................................................................................................2411.0010100000000
...............................AGGCGAAGGCGGCACTGTG......................................................................................................................................................................................1911.0010100000000
........................ATGCCACAGGCGAAGGCGGC............................................................................................................................................................................................2011.0010100000000
.........................TGCCACAGGCGAAGGCGGCACTG........................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................ATGCCGGCCTAGCCCGCTTCCAGGT.....................2511.0010010000000
......................................................................................................................................................................................................CCCGCTTCCAGGCTATGCGTGTGTCCA.......2711.0010000001000
.........................................................................................................................................................................................................GCTTCCAGGCTATGCGTGTGTCCA.......2411.0010000010000
.....AGCTCGAATCCCTTCCGCCATGCCACAG.......................................................................................................................................................................................................2811.0010100000000
...AGAGCTCGAATCCCTTCCGCC................................................................................................................................................................................................................2111.0010100000000
.......................CATGCCACAGGCGAAGGCGGCACTG........................................................................................................................................................................................2511.0010100000000
....GAGCTCGAATCCCTTCCGCCATG.............................................................................................................................................................................................................2311.0010100000000
.............................ACAGGCGAAGGCGGCACTG........................................................................................................................................................................................1911.0010100000000
AACAGAGCTCGAATCCCTTCCGC.................................................................................................................................................................................................................2311.0010100000000
.........................TGCCACAGGCGAAGGCGGCACT.........................................................................................................................................................................................2211.0010000010000
......................................................................................................................................................................................TTCGATGCCGGCCTAGCCC...............................1911.0010100000000
...AGAGCTCGAATCCCTTCCG..................................................................................................................................................................................................................1911.0010100000000
droPer2
AACAGAGCTCGAATCCCTTCCGCCATGCCACAGGCGAAGGCGGCACTGTGGTATGTAAAA-AACCAA-----TCTC--CTTTCAATTGTTATGTCATCAGG--C------T--G-GGATAAAT---------------------ATTAATT----TCCT------------CGTT-TTGCAGTTCGATGCCGGCCTAGCCCGCTTCCAGGCTATGCGTGTGTCCAACTACGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
AACAGAGCTCGAATCCCTTCCGCC................................................................................................................................................................................................................2414.004400000
.ACAGAGCTCGAATCCCTTCC...................................................................................................................................................................................................................2014.004400000
AACAGAGCTCGAATCCCT......................................................................................................................................................................................................................1812.002200000
AACAGAGCTCGAATCCCTTC....................................................................................................................................................................................................................2012.002200000
...........................CCACAGGCGAAGGCGGCACTG........................................................................................................................................................................................2111.001100000
......GCTCGAATCCCTTCCGCC................................................................................................................................................................................................................1811.001100000
.............................ACAGGCGAAGGCGGCACTGT.......................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................GTTCGATGCCGGCCTAGCCCGCTT...........................2411.001001000
.........................................................................................................................................................................................................GCTTCCAGGCTATGCGTGTGTCC........2311.001000001
......GCTCGAATCCCTTCCGCCATG.............................................................................................................................................................................................................2111.001010000
.......................CATGCCACAGGCGAAGGCGGCACTGC.......................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................GCTATGCGTGTGTCCAACT....1911.001010000
.......................................................................................................................................................................................................CCGCTTCCAGGCTATGCGTGT............2111.001001000
.........................TGCCACAGGCGAAGGCGGCACT.........................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................CAGGCTATGCGTGTGTCCAACT....2211.001000010
............................................................................................................................................................................................................TCCAGGCTATGCGTGTGTC.........1911.001000001
..CAGAGCTCGAATCCCTTCC...................................................................................................................................................................................................................1911.001000100
...............CCTTCCGCCATGCCACAGGC.....................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................AGGCTATGCGTGTGTCCAA......1911.001000001
.......CTCGAATCCCTTCCGCCATGC............................................................................................................................................................................................................2111.001010000
droWil2
AGCAAAGCTCGAATCCTTTCCGTCATGCCACTGGCGAGGGCGGCACAGTGGTAAGCAAGA-CTCAAA-----T--C--CTTA--TGGGTTATGTCATCAAC--TCAAAATCG-----CTGAAT------------------GTTTTCACTTAATTTTCC----------TCTTTT-TTTTAGTTCGATGCTGGTCTGGCTCGCTTCCAGGCCATGCGTGTGTCTAACTTTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........CGAATCCTTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................2613.00300030
...............CTTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................2013.00300030
...........AATCCTTTCCGTCATGCCACT........................................................................................................................................................................................................2111.00100010
.............TCCTTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................2211.00100010
.........................TGCCACTGGCGAGGGCGGCAC..........................................................................................................................................................................................2111.00101000
.GCAAAGCTCGAATCCTTTCC...................................................................................................................................................................................................................2011.00110000
.........CGAATCCTTTCCGTCATGC............................................................................................................................................................................................................1911.00100010
....................CGTCATGCCACTGGCGAGGGCGGCA...........................................................................................................................................................................................2511.00101000
.....................GTCATGCCACTGGCGAGGGC...............................................................................................................................................................................................2011.00100010
....................CGTCATGCCACTGGCGAGGGCGGC............................................................................................................................................................................................2411.00100100
...AAAGCTCGAATCCTTTCCGTC................................................................................................................................................................................................................2111.00100010
................TTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................1911.00110000
..........................................................................................................................................................................................ATGCTGGTCTGGCTCGCTTCCAGGCC....................2611.00101000
.....................................................................................................................................................................................GTTCGATGCTGGTCTGGCTCGCTTCCAG.......................2811.00100100
.....................................................................................................................................................................................GTTCGATGCTGGTCTGGCT................................1911.00100010
.....................GTCATGCCACTGGCGAGGGCGGC............................................................................................................................................................................................2311.00100010
...........AATCCTTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................2411.00100010
............ATCCTTTCCGTCATGCCACTGGC.....................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................CCAGGCCATGCGTGTGTCT........1911.00100010
droVir3
AGCAGAGCTCGAATCCGTTTCGCCATGCCACCGGAGAGGGCGGCACTGTGGTATGCA------CAAT-----T--G--------CTGGTTATGTCATCACTGGC--------------CAAATA---ATAACACATATAGTATTATTAATC-----ACT----------TGATTT-TTGCAGTTTGATGCCGGTCTAGCGCGCTTCCAGGCCATGCGTGTGTCAAACTATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................AGGCCATGCGTGTGTCAAACT....2113.003000000000000000000100200000000000000000000000000000000000000000
.........................................................................................................................................................................................GATGCCGGTCTAGCGCGCTTCCA........................2313.003002000000000000001000000000000000000000000000000000000000000000
.............TCCGTTTCGCCATGCCACCG.......................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
......GCTCGAATCCGTTTCGCCAT..............................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TGCCGGTCTAGCGCGCTTCCAGGCC....................2511.001000100000000000000000000000000000000000000000000000000000000000
.......CTCGAATCCGTTTCGCCATGC............................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................GTTTCGCCATGCCACCGGAGAGGGC...............................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
......GCTCGAATCCGTTTCGCCATGC............................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............ATCCGTTTCGCCATGCCACCGGAGAGG.................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GTCTAGCGCGCTTCCAGGCC....................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................CCAGGCCATGCGTGTGTC.........1811.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGATGCCGGTCTAGCGCGCT............................2011.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................TGCCGGTCTAGCGCGCTTCCAGGCCA...................2611.001000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................TCCAGGCCATGCGTGTGTCAAACT....2411.001000000000000000000010000000000000000000000000000000000000000000
............ATCCGTTTCGCCATGCCACCG.......................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................GTTTCGCCATGCCACCGGAGAGGGCG..............................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.......................CATGCCACCGGAGAGGGCGGC............................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AGCGCGCTTCCAGGCCATGCGTGT............2411.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................ATGCGTGTGTCAAACTATG.1911.001001000000000000000000000000000000000000000000000000000000000000
.GCAGAGCTCGAATCCGTTTCGCCATGCC...........................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GATGCCGGTCTAGCGCGCTT...........................2011.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TTCCAGGCCATGCGTGTGTCAAA......2311.001000000000000000000000000000000000000000100000000000000000000000
........TCGAATCCGTTTCGCCATGCCACC........................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............CCGTTTCGCCATGCCACCGGAGA...................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GATGCCGGTCTAGCGCGCTTCCAGGCC....................2711.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................GGTCTAGCGCGCTTCCAG.......................1811.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................GTCTAGCGCGCTTCCAGGC.....................1911.001001000000000000000000000000000000000000000000000000000000000000
............ATCCGTTTCGCCATGCCACCGGAGAGGGC...............................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
...........AATCCGTTTCGCCATGCCACC........................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CATGCGTGTGTCAAACTATG.2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................TCCAGGCCATGCGTGTGTCAAA......2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GGCCATGCGTGTGTCAAACTAT..2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCGCTTCCAGGCCATGCGTGTGT..........2311.001000000000000000010000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTGATGCCGGTCTAGCGCGCT............................2111.001000000000000001000000000000000000000000000000000000000000000000
................GTTTCGCCATGCCACCGGA.....................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..CAGAGCTCGAATCCGTTTCGCCATGC............................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CAGGCCATGCGTGTGTCAAACT....2211.001001000000000000000000000000000000000000000000000000000000000000
..................TTCGCCATGCCACCGGAGAGGGC...............................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GCTTCCAGGCCATGCGTGTGC..........2111.001000100000000000000000000000000000000000000000000000000000000000
............................CACCGGAGAGGGCGGCACTGTGT.....................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
...............CGTTTCGCCATGCCACCGGAGAGGGCGGC............................................................................................................................................................................................2911.001000000000000000000100000000000000000000000000000000000000000000
AGCAGAGCTCGAATCCGTTTC...................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................TGATGCCGGTCTAGCGCGCTTCCA........................2411.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AGCAGAGCTCCAATCCTTTCCGTCATGCCACTGGAGAGGGCGGCACTGTGGTAAGTGCCA------A-----A--T-------AATGGTTATGTCATCACATGCCAGCATTTTG-G----AATGCTC--------------AATAATAAAT----A--T-TTACT----T---GA-TTGCAGTTCGATGCTGGCCTAGCCCGTTTCCAGGCCATGCGCGTCTCACACATTGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................AGGCCATGCGCGTCTCAC.......1811.001100000
...............CTTTCCGTCATGCCACTGGA.....................................................................................................................................................................................................2011.001000001
.........................TGCCACTGGAGAGGGCGGCA...........................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................TTCCAGGCCATGCGCGTCTC.........2011.001100000
.................TTCCGTCATGCCACTGGAGA...................................................................................................................................................................................................2011.001100000
droGri2
AGCAGAGCTCGAATCCTTTTCGCCATGCCACCGGCGAGGGCGGCACTGTGGTATGTCTAC---------GGAT--T--T----GCTGATTATGTCATCACTGCCCAGTTTTA-----TTAATT------------------GTTTAAAATAT---A--T-ATAATTCTATGCCCT-TCCAAGTTCGATGCTGGTCTAGCTCGCTTCCAGGCCATGCGTGTGTCTAACTACGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................TCCAGGCCATGCGTGTGTCTA.......2111.00110
.......................CATGCCACCGGCGAGGGCGG.............................................................................................................................................................................................2011.00110
.........................................................................................................................................................................................GATGCTGGTCTAGCTCGCTT...........................2011.00110
.............................................................................................................................................................................................................CCAGGCCATGCGTGTGTCT........1911.00101

Generated: 05/18/2015 at 07:15 PM