ID:

dsi_7502

 Coordinate:

2l:22188911-22189060 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.2 -5.1 -4.98

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DM297_I-intLTRGypsy-
mature
star
  1. dsi_7502  2l:22188957-22188982 -
  2. node_25414:12187-12212 -

Sense Strand Reads

TTCTGCGAGGAGTAGGCGTCAACTCTTAATAGCTAAACTACATCTAGAAGGTAATAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGGCATTTATTCAAAATTAACTACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCCGATTTAAGAACCTTAATTAACATAGCACAAAATGAGGGGATTTATGAAGAACACGCAAATGTTTATATGAAGCAAAATTTCGAAAAAA
********************************************************************************.((((((..(((((...((((((..((((.....))))...))..))))..)))))..)))...))).......************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 O001
Testis
 SRR1275487
Male larvae		 GSM343915
embryo
 M025
embryo
.........................................................................................................ATTTATTGAAGACTAACTACT............................................................................................................................ 21 3 3 19.00 57 27 3 18 0 1 6 0 1 0 0 1 0 0
..............................................................................................................................................................................TTAATTAACATAGCACAAAATGAGGGGA................................................ 28 0 3 3.33 10 0 6 0 4 0 0 0 0 0 0 0 0 0
..........................................................................................................TTTATTGAAGACTAACTACT............................................................................................................................ 20 3 20 2.70 54 21 3 23 1 0 3 0 2 0 0 0 0 1
............TAGGCGTCAACTCTTAATAGCTAAGC.................................................................................................................................................................................................................... 26 1 3 1.33 4 0 0 0 3 0 0 0 1 0 0 0 0 0
..........................TAATAGCTAAGCTACATCTAGAAGG....................................................................................................................................................................................................... 25 1 3 1.33 4 0 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GAAGAACACGCAAATGTT......................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................AAGCAATTAGGGACTCTATTAAGGC................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GAAGAACACCGAAATGTTTATATGA.................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATAGCTAAACTACATCTAGAAGG....................................................................................................................................................................................................... 25 0 3 1.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0
.........................................................................................................ATTTATTGAAGACTAACTAC............................................................................................................................. 20 3 17 0.82 14 10 0 3 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGAGGGGATTTATGAAGAACACGCAAA............................. 27 0 5 0.60 3 0 1 0 0 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................GAACATGCAAATGTTTAT...................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................TTTGTTCTGTATTTTGGCTCATCATG................................................................................................ 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TAGGGACTCTATTAAGGCACTTAT........................................................................................................................................... 24 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GAAGAACACGCAAATGTTTATATTA.................. 25 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................TGTTCTGTATTTTGGCTCATCATGAAAT............................................................................................ 28 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................TTGTTCTGTATTTTGGCTCATCA.................................................................................................. 23 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................GCTTAATAGCTAAGCTACATCTAGAAGG....................................................................................................................................................................................................... 28 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........AGTAGGCGTCAACTCTTAATAGC......................................................................................................................................................................................................................... 23 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................TTTTTCTGTATTTACGCTCATCA.................................................................................................. 23 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCCCGATTTAAGAACCTTAATTAAC................................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGAAATTCCCGATTTAAGAACCTTAA........................................................................ 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACCTTAATTAACATAGCACAAAATGAG.................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................TTAATAGCTAAGCTACATCTAGAAGG....................................................................................................................................................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............TAGGCGTCAACTCTTAATAGCTAAG..................................................................................................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........AGTAGGCGTCAACTCTTAATAGCTAAAC.................................................................................................................................................................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................TAATAGCTAAGCTACATCTAGAAGGTAA.................................................................................................................................................................................................... 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTGCAAGCAATTAGGGACTCTATTA..................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TGCAAGCAATTAGGGACTCTATTAAG................................................................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TGAGGGGATTTATGAAGAACACGCAAATG........................... 29 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................TTTGCAAGCAATTAGGGACTCTAT....................................................................................................................................................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAAAATGCGGGTATCTATGAAGAACA................................... 26 3 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTATTTGCAAGCAATTAGGGACTCTAT....................................................................................................................................................... 27 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................TCATTTATTTGCAAGCAATTAGGGACTC.......................................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................AATGAGGGGCTTTTCGAAGA...................................... 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCTCATCATGAAATTCCCGATTTAAGA............................................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACATAGCACAAAATGAGGGGA................................................ 21 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TAATTAACATAGCACAAAATGATGGA................................................. 26 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAACATAGCACAAAATGAGGGGA................................................ 23 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TAATTAACATAGCACAAAATGAGGGGA................................................ 27 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CATCATGAAATTCCCGAT..................................................................................... 18 0 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TAGCACAAAATGAGGGGA................................................ 18 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................TATTTGCAAGCAATTAGGGACTCTA........................................................................................................................................................ 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GGGGGACTCATGAAGAACA................................... 19 3 15 0.13 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGCACAAAATGAGGGGATTTATG.......................................... 23 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................CACAAAATGCGGGTATCTATGAAGAACA................................... 28 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TGCAAGCAATTAGGGA............................................................................................................................................................. 16 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAAAATGCGGGTATCTATGAAGAACA................................... 27 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AAAATTAACTGCTAATT........................................................................................................................ 17 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................TAATTTATTTGCAAGCAATTAGGGA............................................................................................................................................................. 25 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TAGCACAAAATGATGGAATTTATGAT........................................ 26 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................GGGGGACTCATGAAGAAC.................................... 18 3 20 0.10 2 0 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................GGGGACTCATGAAGAACA................................... 18 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TGGAATTTATAAAGAACACGC................................ 21 3 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................AAGAACCTTAATGAA.................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

AAGACGCTCCTCATCCGCAGTTGAGAATTATCGATTTGATGTAGATCTTCCATTATTATGGCTGGAGTAGTAAATAAACGTTCGTTAATCCCTGAGATAATTCCGTAAATAAGTTTTAATTGATGATTAAACAAGACATAAAACCGAGTAGTACTTTAAGGGCTAAATTCTTGGAATTAATTGTATCGTGTTTTACTCCCCTAAATACTTCTTGTGCGTTTACAAATATACTTCGTTTTAAAGCTTTTTT
************************************************************************************************.((((((..(((((...((((((..((((.....))))...))..))))..)))))..)))...))).......******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 M024
male body		 M023
head
 M025
embryo
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAATTGT.................................................................. 26 0 3 70.00 210 99 94 5 0 0 2 3 7 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 28 0 3 62.00 186 102 56 1 16 10 0 1 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAAT..................................................................... 26 0 3 31.67 95 51 38 1 0 0 1 1 3 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAATTGT.................................................................. 29 0 3 28.33 85 51 32 0 0 0 0 2 0 0 0 0 0
...........................................................................................................................TGATTAAACAAGACATAAAACCGAGT..................................................................................................... 26 0 2 26.50 53 2 0 47 2 2 0 0 0 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 24 0 3 26.00 78 9 5 2 58 4 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATTGT.................................................................. 27 0 3 26.00 78 34 41 1 0 0 0 2 0 0 0 0 0
..................AGTTGAGAATTATCGATTTGATGTAGAT............................................................................................................................................................................................................ 28 0 3 26.00 78 32 46 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAATTGTAT................................................................ 28 0 3 21.00 63 33 19 0 0 0 0 7 4 0 0 0 0
.......................................................TTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 26 0 3 20.67 62 18 16 2 23 1 1 0 1 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAA...................................................................... 25 0 3 20.67 62 33 25 1 0 0 1 1 1 0 0 0 0
........................................................TATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 25 0 3 19.67 59 8 3 2 39 7 0 0 0 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 27 0 3 18.33 55 22 12 4 13 2 2 0 0 0 0 0 0
.................................................CCATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 26 0 4 17.25 69 15 12 34 4 0 2 0 0 0 2 0 0
.....................................................TATTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 28 0 3 14.00 42 17 11 0 9 3 0 0 2 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAATT.................................................................... 27 0 3 12.67 38 20 14 0 0 0 2 1 1 0 0 0 0
..................AGTTGAGAATTATCGATTTGATGT................................................................................................................................................................................................................ 24 0 3 12.33 37 15 20 0 0 0 0 2 0 0 0 0 0
..................................................CATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 25 0 4 9.50 38 2 3 16 10 6 0 0 0 0 1 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 25 0 3 9.00 27 9 4 1 10 2 1 0 0 0 0 0 0
......................................................ATTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 27 0 3 8.33 25 8 5 0 10 2 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAATTAATTGT.................................................................. 28 0 3 8.33 25 10 15 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGCT...................................................................................... 25 0 5 8.20 41 17 10 4 6 0 0 0 0 4 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGTTCGTT.................................................................................................................................................................... 29 0 3 8.00 24 16 6 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGAATTAATTGTATCGTGTTTTACT..................................................... 26 0 3 7.67 23 9 9 3 0 1 0 0 1 0 0 0 0
............................TATCGATTTGATGTAGATCTTCCAT..................................................................................................................................................................................................... 25 0 3 7.33 22 1 1 17 0 1 2 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATTGTAT................................................................ 29 0 3 7.33 22 12 9 0 0 0 0 1 0 0 0 0 0
.....................TGAGAATTATCGATTTGATGTAGAT............................................................................................................................................................................................................ 25 0 3 6.67 20 5 6 7 0 0 2 0 0 0 0 0 0
...............................CGATTTGATGTAGATCTTCCATTATT................................................................................................................................................................................................. 26 0 3 5.33 16 0 0 8 0 0 8 0 0 0 0 0 0
................................................................................................................................................CGAGTAGTACTTTAAGGGCTAAATTCT............................................................................... 27 0 5 5.00 25 17 5 2 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTGTATCGT............................................................. 25 0 3 5.00 15 5 7 0 0 0 0 2 1 0 0 0 0
.............................................................CTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 24 0 6 4.83 29 0 0 28 0 0 1 0 0 0 0 0 0
...........................................................GGCTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 26 0 6 4.83 29 7 9 3 8 1 1 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAATTATCGAT....................................................................................................................................................................................................................... 25 0 3 4.67 14 1 0 13 0 0 0 0 0 0 0 0 0
..........................................AGATCTTCCATTATTATGGCTGGAGT...................................................................................................................................................................................... 26 0 3 4.67 14 3 2 8 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................GGAATTAATTGTATCGTGTTTTACT..................................................... 25 0 3 4.67 14 8 6 0 0 0 0 0 0 0 0 0 0
................................................TCCATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 27 0 4 4.50 18 7 6 5 0 0 0 0 0 0 0 0 0
.............................................TCTTCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 26 0 3 4.00 12 0 0 12 0 0 0 0 0 0 0 0 0
..............................................................TGGAGTAGTAAATAAACGTTCGTTAAT................................................................................................................................................................. 27 0 6 4.00 24 7 1 15 0 0 1 0 0 0 0 0 0
..............................................CTTCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 25 0 3 3.67 11 0 0 8 2 0 1 0 0 0 0 0 0
........................................................TATGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 26 0 3 3.67 11 0 1 0 7 2 0 0 1 0 0 0 0
..................AGTTGAGAATTATCGATTTGATGTAG.............................................................................................................................................................................................................. 26 0 3 3.67 11 3 7 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGTACTTTAAGGGC....................................................................................... 26 0 2 3.50 7 2 3 0 1 0 1 0 0 0 0 0 0
............................TATCGATTTGATGTAGATCTTCCATT.................................................................................................................................................................................................... 26 0 3 3.33 10 1 0 9 0 0 0 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 23 0 4 3.25 13 1 0 2 10 0 0 0 0 0 0 0 0
.............................................................CTGGAGTAGTAAATAAACGTTCGTT.................................................................................................................................................................... 25 0 6 3.17 19 0 0 18 0 0 1 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGTACTTTAAGGGCT...................................................................................... 27 0 2 3.00 6 1 2 2 1 0 0 0 0 0 0 0 0
..................................................................................................................................ACAAGACATAAAACCGAGTAGTACT............................................................................................... 25 0 2 3.00 6 0 0 2 3 0 1 0 0 0 0 0 0
................................................................................................................................AAACAAGACATAAAACCGAGTAGTACT............................................................................................... 27 0 2 3.00 6 0 1 2 3 0 0 0 0 0 0 0 0
.................................................................................................................................AACAAGACATAAAACCGAGTAGTACT............................................................................................... 26 0 2 3.00 6 0 0 0 5 1 0 0 0 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGCTAAATTCT............................................................................... 28 0 5 2.80 14 6 7 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAATTGTATCGT............................................................. 31 0 3 2.67 8 7 1 0 0 0 0 0 0 0 0 0 0
...................................................ATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 24 0 4 2.50 10 0 3 2 5 0 0 0 0 0 0 0 0
...........................................................GGCTGGAGTAGTAAATAAACGTTCGTT.................................................................................................................................................................... 27 0 6 2.50 15 5 8 0 2 0 0 0 0 0 0 0 0
................................................................................................................................................CGAGTAGTACTTTAAGGGCTAAATTCTT.............................................................................. 28 0 5 2.40 12 8 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTGTATCGTGTTTT........................................................ 26 0 3 2.33 7 2 2 3 0 0 0 0 0 0 0 0 0
...............................................TTCCATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 28 0 3 2.33 7 1 1 4 1 0 0 0 0 0 0 0 0
........................................................AATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 25 1 3 2.33 7 0 0 0 7 0 0 0 0 0 0 0 0
.....................................................TATTATGGCTGGAGTAGTAAATAAA............................................................................................................................................................................ 25 0 3 2.33 7 0 0 0 5 2 0 0 0 0 0 0 0
...............................................................................................................................................................GGGCTAAATTCTTGGAATTAATTGT.................................................................. 25 0 3 2.33 7 1 1 2 0 0 1 0 2 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGCTAAATT................................................................................. 26 0 5 2.20 11 5 4 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................CGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 24 0 5 2.20 11 5 5 1 0 0 0 0 0 0 0 0 0
............................................ATCTTCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 27 0 3 2.00 6 0 0 6 0 0 0 0 0 0 0 0 0
....................................................................AGTAAATAAACGTTCGTTAATCCCT............................................................................................................................................................. 25 0 5 2.00 10 7 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 25 0 5 2.00 10 6 1 2 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TAAATTCTTGGAATTAATTGTATCGT............................................................. 26 0 3 2.00 6 1 1 0 1 0 0 3 0 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 24 0 3 2.00 6 2 3 0 1 0 0 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAATTAT........................................................................................................................................................................................................................... 21 0 3 2.00 6 0 0 1 0 0 0 0 0 5 0 0 0
..............................................................................................................................TTAAACAAGACATAAAACCGAGTAGT.................................................................................................. 26 0 2 2.00 4 0 0 3 0 0 1 0 0 0 0 0 0
..............CCGCAGTTGAGAATTATCGATT...................................................................................................................................................................................................................... 22 0 3 2.00 6 0 0 1 0 0 0 0 0 5 0 0 0
...............................................TTCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 24 0 3 2.00 6 0 0 5 1 0 0 0 0 0 0 0 0
....................TTGAGAATTATCGATTTGATGTAGAT............................................................................................................................................................................................................ 26 0 3 2.00 6 3 1 1 0 0 0 0 1 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 23 0 3 2.00 6 1 1 0 3 1 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAAT......................................................................... 19 0 3 2.00 6 0 1 5 0 0 0 0 0 0 0 0 0
.................CAGTTGAGAATTATCGATTTGATGT................................................................................................................................................................................................................ 25 0 3 2.00 6 0 2 3 0 0 1 0 0 0 0 0 0
........................................................TATGGCTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 29 0 3 2.00 6 2 2 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAATTG................................................................... 28 0 3 2.00 6 1 3 0 0 0 1 0 1 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGC....................................................................................... 24 0 5 1.80 9 1 3 1 0 0 0 0 0 4 0 0 0
..................................................................................................................................................................CTAAATTCTTGGAATTAATTGTATCGT............................................................. 27 0 3 1.67 5 2 2 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAATTGTA................................................................. 27 0 3 1.67 5 4 1 0 0 0 0 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAATTATCGATT...................................................................................................................................................................................................................... 26 0 3 1.67 5 1 0 4 0 0 0 0 0 0 0 0 0
..............CCGCAGTTGAGAATTATCGATTTGATGT................................................................................................................................................................................................................ 28 0 3 1.67 5 0 0 2 1 1 1 0 0 0 0 0 0
.............................ATCGATTTGATGTAGATCTTCCATT.................................................................................................................................................................................................... 25 0 3 1.67 5 2 1 2 0 0 0 0 0 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAACGTTCGTT.................................................................................................................................................................... 28 0 3 1.67 5 1 2 0 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TTACTCCCCTAAATACTTCTTGTGCGT............................... 27 0 3 1.67 5 2 2 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 29 0 5 1.60 8 3 4 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................AACAAGACATAAAACCGAGTAGTACTTT............................................................................................. 28 0 2 1.50 3 0 0 0 3 0 0 0 0 0 0 0 0
............................................................................................................................GATTAAACAAGACATAAATGCGAGT..................................................................................................... 25 2 2 1.50 3 0 1 0 0 0 0 2 0 0 0 0 0
...................................TTGATGTAGATCTTCCAT..................................................................................................................................................................................................... 18 0 4 1.50 6 0 0 0 0 0 0 0 0 6 0 0 0
....................................................................................................................................AAGACATAAAACCGAGTAGTACTTTAA........................................................................................... 27 0 2 1.50 3 0 0 2 1 0 0 0 0 0 0 0 0
......................GAGAATGGTCGAATTGATGT................................................................................................................................................................................................................ 20 3 12 1.50 18 0 0 0 0 0 1 8 0 1 6 1 1
...............................................................................................................................TAAACAAGACATAAAACCGAGTAGT.................................................................................................. 25 0 2 1.50 3 0 0 2 0 0 1 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGCTA..................................................................................... 26 0 5 1.40 7 3 2 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGAATTAATTGTATCGTGTTTT........................................................ 24 0 3 1.33 4 1 2 0 1 0 0 0 0 0 0 0 0
...............CGCAGTTGAGAATTATCGATTTGATGT................................................................................................................................................................................................................ 27 0 3 1.33 4 0 0 0 4 0 0 0 0 0 0 0 0
..............................................................TGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 23 0 6 1.33 8 0 0 4 0 0 0 0 0 4 0 0 0
......................................................................................................................................................................ATTCTTGGAATTAATTGTATCGTGTT.......................................................... 26 0 3 1.33 4 2 1 0 0 0 0 1 0 0 0 0 0
...........CATCCGCAGTTGAGAATTATCGAT....................................................................................................................................................................................................................... 24 0 3 1.33 4 0 0 3 0 0 1 0 0 0 0 0 0
...............................CGATTTGATGTAGATCTT......................................................................................................................................................................................................... 18 0 3 1.33 4 0 0 4 0 0 0 0 0 0 0 0 0
...............................CGATTTGATGTAGATCTTCCATTAT.................................................................................................................................................................................................. 25 0 3 1.33 4 0 0 2 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAATTGTA................................................................. 30 0 3 1.33 4 2 2 0 0 0 0 0 0 0 0 0 0
......................................................ATTATGGCTGGAGTAGTAAATAAA............................................................................................................................................................................ 24 0 3 1.33 4 0 0 0 3 1 0 0 0 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAA............................................................................................................................................................................ 20 0 3 1.33 4 0 0 4 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGCTAAATT................................................................................. 30 0 5 1.20 6 3 3 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTGTATCGTGTT.......................................................... 24 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................AACAAGACATAAAACCGAGTAGTACTT.............................................................................................. 27 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGTAGATCTTCCAT..................................................................................................................................................................................................... 26 0 3 1.00 3 0 0 2 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTACTCCCCTAAATACTTCTTGTGC................................. 25 0 3 1.00 3 2 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTGTATCG.............................................................. 20 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
....................................TGATGTAGATCTTCCATTATTATGGCT........................................................................................................................................................................................... 27 0 3 1.00 3 1 1 0 0 0 1 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAATAAA............................................................................................................................................................................ 26 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTATGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 27 0 3 1.00 3 1 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATT.................................................................... 25 0 3 1.00 3 1 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTTAATTGATGATTAAACAAGACAT............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGTAGATCTT......................................................................................................................................................................................................... 22 0 3 1.00 3 0 1 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACAAGACATAAAACCGAGTAGTACTT.............................................................................................. 26 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................TAAACAAGACATAAAACCGAGTAGTAC................................................................................................ 27 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGTAGATCTTCCATT.................................................................................................................................................................................................... 27 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.....................................................AATTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 28 1 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0
................................................................................................................................AAACAAGACATAAAACCGAGTAGTACTTTA............................................................................................ 30 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGTTCG...................................................................................................................................................................... 27 0 3 1.00 3 2 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGCTAAATTCTTGGAATTAATTGTAT................................................................ 27 0 3 1.00 3 1 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGCTAAATTCTTGGAATTAATTGTATCGT............................................................. 29 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
........................................................TATGGCTGGAGTAGTAAATAAACGTTC....................................................................................................................................................................... 27 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGT.................................................................................................. 15 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................TTGATGTAGATCTTCCATTATTATGGC............................................................................................................................................................................................ 27 0 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0 0
.....................TGAGAATTATCGATTTGATG................................................................................................................................................................................................................. 20 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................TAAACAAGACATAAAACCGAGTAGTACT............................................................................................... 28 0 2 1.00 2 0 0 1 1 0 0 0 0 0 0 0 0
.....................TGAGAATTATCGATTTGATGTAGATCTT......................................................................................................................................................................................................... 28 0 3 1.00 3 1 1 1 0 0 0 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAATAA............................................................................................................................................................................. 25 0 3 1.00 3 1 0 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGAATTAATTGTATCGTGTTTT........................................................ 23 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAATTGTAT................................................................ 31 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..................................................AATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 25 1 4 1.00 4 0 0 0 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................GGGCTAAATTCTTGGAATTAATTGTATCGT............................................................. 30 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............................TATCGATTTGATGTAGATCTTCCATTA................................................................................................................................................................................................... 27 0 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAATTAATTGTAT................................................................ 30 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACGTTC....................................................................................................................................................................... 26 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0 0
............................................................................................................................GATTAAACAAGACATAAAACCGAGT..................................................................................................... 25 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0 0
............................TATCGATTTGATGTAG.............................................................................................................................................................................................................. 16 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGTATCGTGTTTTACTCCCCTAAAT............................................ 25 0 6 1.00 6 1 0 5 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGC....................................................................................... 20 0 5 1.00 5 0 0 1 0 0 0 0 0 4 0 0 0
....................................TGATGTAGATCTTCCATTATT................................................................................................................................................................................................. 21 0 7 0.86 6 0 0 0 0 0 0 0 0 6 0 0 0
...........................................................................................................................TGATTAAACAAGACA................................................................................................................ 15 0 6 0.83 5 0 0 5 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TAAAACCGAGTAGTACT............................................................................................... 17 0 6 0.83 5 0 0 5 0 0 0 0 0 0 0 0 0
................................................................................................................................................CGAGTAGTACTTTAAGGGCTAAATT................................................................................. 25 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAAT.............................................................................................................................................................................................................................. 18 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
................................................TCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 23 0 4 0.75 3 0 0 2 1 0 0 0 0 0 0 0 0
.....................................................TATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 22 0 4 0.75 3 0 1 0 2 0 0 0 0 0 0 0 0
......................................................ATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 21 0 4 0.75 3 0 0 0 2 1 0 0 0 0 0 0 0
.................................................CCATTATTATGGCTGGAGTAG.................................................................................................................................................................................... 21 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
................................................TCCATTATTATGGCTGGAGT...................................................................................................................................................................................... 20 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
.................................................CCATTATTATGGCTGGAGT...................................................................................................................................................................................... 19 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAA............................................................................................................................................................................................................................... 17 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGA........................................................................... 20 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAAT......................................................................... 20 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTG................................................................... 15 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCTAAATACTTCTTGTGCGT............................... 20 0 6 0.67 4 0 0 0 0 0 0 0 0 4 0 0 0
.................................................CCATTATTATGGCTGGAGTAGTAAATA.............................................................................................................................................................................. 27 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
............................TATCGATTTGATGTAGATCTTC........................................................................................................................................................................................................ 22 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
............................TATCGATTTGATGTAGATCTTCCA...................................................................................................................................................................................................... 24 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAATAAAC........................................................................................................................................................................... 27 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGTGTTTTACTCCCCTAAATACTTCT...................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................ATCGATTTGATGTAGATCTTCCAT..................................................................................................................................................................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
......................................................AATATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 27 1 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................TGAGAATTATCGATTTGATGTAG.............................................................................................................................................................................................................. 23 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAATTAAT..................................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTGTA................................................................. 17 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGTAG.............................................................................................................................................................................................................. 17 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAATA.............................................................................................................................................................................. 24 0 3 0.67 2 0 1 0 1 0 0 0 0 0 0 0 0
....................................................TTATTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 29 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATTGTA................................................................. 28 0 3 0.67 2 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................ATATGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 27 1 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................TTCCATTATTATGGCTGGAGT...................................................................................................................................................................................... 21 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTGTATCGTGTT.......................................................... 28 0 3 0.67 2 0 0 0 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAAT......................................................................... 22 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTGGGAATTAAT..................................................................... 26 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
...................................TTGATGTAGATCTTCCATTATTATGGCT........................................................................................................................................................................................... 28 0 3 0.67 2 0 1 0 0 0 1 0 0 0 0 0 0
..........................................AGATCTTCCATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 29 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................TATTATGGCTGGAGTAGTAAATAAACGTT........................................................................................................................................................................ 29 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAATTAATT.................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGAATTAATTGTATCGTGTTTTACTC.................................................... 27 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTGTATCGTGT........................................................... 27 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAA...................................................................... 22 0 3 0.67 2 0 1 0 0 0 0 0 1 0 0 0 0
.....................................................TATTATGGCTGGAGTAGTAAATAAAC........................................................................................................................................................................... 26 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
............................TATCGATTTGATGTAGAT............................................................................................................................................................................................................ 18 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAATT.................................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
......................................................ATTATGGCTGGAGTAGTAAATAAACG.......................................................................................................................................................................... 26 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TCTTGGAATTAATTGTATCGTGTTT......................................................... 25 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTGTAT................................................................ 22 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTAAT..................................................................... 23 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGT................................................................................................................................................................................................................ 15 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGTATCGTGTTTTACTCCCCTAAAT............................................ 26 0 6 0.67 4 0 1 1 1 0 1 0 0 0 0 0 0
...............................................................GGAGTAGTAAATAAACGTTCGTTAAT................................................................................................................................................................. 26 0 6 0.67 4 1 1 0 0 0 2 0 0 0 0 0 0
....................................................ATATTATGGCTGGAGTAGTAAATAAACGT......................................................................................................................................................................... 29 1 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAAT..................................................................... 24 0 3 0.67 2 0 1 0 0 0 0 1 0 0 0 0 0
............................TATCGATTTGATGTAGATCTT......................................................................................................................................................................................................... 21 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGAATTAATTGTATCGTGTTT......................................................... 22 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGAATTAATTGTATCGTGTTTTACTCCC.................................................. 28 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGAATTAATTGTATCGTGTT.......................................................... 22 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGGAATTAATTGTATCGTGTTT......................................................... 23 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAAT......................................................................... 21 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...........CATCCGCAGTTGAGAATTATCGATT...................................................................................................................................................................................................................... 25 0 3 0.67 2 0 0 0 1 0 1 0 0 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAACTT......................................................................................................................................................................... 24 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGCTGGAGTAGTAAATAAA............................................................................................................................................................................ 21 0 3 0.67 2 0 0 1 0 1 0 0 0 0 0 0 0
.................................................................AGTAGTAAATAAACGTTCGTTAATCCCT............................................................................................................................................................. 28 0 5 0.60 3 1 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGCT...................................................................................... 21 0 5 0.60 3 0 0 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCGAGTAGTACTTTAAGGGCTAAATTCTT.............................................................................. 29 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GCGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 25 1 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................................................AGTAGTAAATAAACGTTCGTTAATCCC.............................................................................................................................................................. 27 0 5 0.60 3 2 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACAAGACATAAAACCGAGTAGTACTTT............................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGTACT............................................................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
............ATCCGCAGTTGAGAATT............................................................................................................................................................................................................................. 17 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................GACATAAAACCGAGTAGTACTTTAA........................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAAACAAGACATAAAACCGAGTAGTACT............................................................................................... 28 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................TAAACAAGACATAAAATCGAGTAGTACTT.............................................................................................. 29 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAATGCGAGTAGTACTTTAAGGAC....................................................................................... 26 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................ACAAGACATAAAACCGAGTAGTACTTTA............................................................................................ 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGACATAAAACCGAGTAGTACTTT............................................................................................. 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................AACATTATTATGGCTGGAGTAGTAAAT............................................................................................................................................................................... 27 2 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................AGACATAAAACCGAGTAGTACTTTA............................................................................................ 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
............ATCCGCAGTTGAGAAT.............................................................................................................................................................................................................................. 16 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGTACTTTA............................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..........TCATCCGCAGTTGAGAATTA............................................................................................................................................................................................................................ 20 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................ATTAAACAAGACATAAAACCGAGT..................................................................................................... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................AAACAAGACATAAAACCGAGTAGT.................................................................................................. 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................ATTATTATGGCTGGAGTAGT................................................................................................................................................................................... 20 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAAAACCGAGTAGTACTTTAA........................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................ATTATTATGGCTGGAGT...................................................................................................................................................................................... 17 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACAAAACCGAGTAGTACTTTAAGGGCT...................................................................................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AGTACTTTAAGGGCTAAATTCT............................................................................... 22 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTAAACAAGACATAAAACCGAGTAGTAC................................................................................................ 28 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................CCATTATTATGGCTGGAGTAGTAAA................................................................................................................................................................................ 25 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................ATCGATTTGATGTAGAT............................................................................................................................................................................................................ 17 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAAAACCGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 31 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CATAAAACCGAGTAGT.................................................................................................. 16 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................CAAGACATAAAACCGAGTAGTACTTTA............................................................................................ 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................GACATAAAACCGAGTAGTACT............................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAACAAGACATAAAACCGAGTAGTAC................................................................................................ 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGATTAAACAAGACATAAATGCGAGT..................................................................................................... 26 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................TGGCTGGAGTAGTAAAT............................................................................................................................................................................... 17 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGACATAAATGCGAGTAGTACT............................................................................................... 22 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TCAAGACATAAAACCGAGTAGTACTT.............................................................................................. 26 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................AGACATAAATGCGAGTAGTACTTTAAGGG........................................................................................ 29 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................ACAAGACATAAATGCGAGTAGTACTTT............................................................................................. 27 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAGACATAAAACCGAGTAGTACTTTA............................................................................................ 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AACAAGACATAAAACCGAGTAGTAC................................................................................................ 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................CTGGAGTAGTAAATAAA............................................................................................................................................................................ 17 0 7 0.43 3 0 0 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTT.............................................................................................. 17 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TACTCCCCTAAATACTTCTTGTGCGTTT............................. 28 0 5 0.40 2 1 0 0 0 0 1 0 0 0 0 0 0
......................................................TTTTTGCCTGGAGTAGTAAATA.............................................................................................................................................................................. 22 3 5 0.40 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTAAGGGCTAA.................................................................................... 27 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CCCCTAAATACTTCTTGTGCGTTT............................. 24 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................CGATTTGATGTAGAT............................................................................................................................................................................................................ 15 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTACTACCTTAAATATTTCTTGTGC................................. 25 3 10 0.40 4 2 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................TACTCCCCTAAATACTTCTTGTGCGT............................... 26 0 5 0.40 2 0 0 1 0 0 1 0 0 0 0 0 0
..................................................................GTAGTAAATAAACGTTCGTTAATCCC.............................................................................................................................................................. 26 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ACCGAGTAGTACTTTAAGGGCTAAATT................................................................................. 27 0 5 0.40 2 0 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................AAAACCGAGTAGTACTTTA............................................................................................ 19 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................AAACCGAGTAGTACTTTAAGGGCT...................................................................................... 24 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TAAAACCGAGTAGTACTTTAAGGGCT...................................................................................... 26 0 5 0.40 2 0 0 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................ACCGAGTAGTACTTTAAGGGCTAAAT.................................................................................. 26 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TAAATTCTTGGAATTAATTGTATCGTGTT.......................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTAAGGGCTAAATTCTTGGA........................................................................... 20 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................GTTGAGAATTATCGATTTGATTT................................................................................................................................................................................................................ 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTG................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATTTTAT................................................................ 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................CTTCCATTATTATGGCTGGAGTA..................................................................................................................................................................................... 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAATTCTTGGAATTAATTGTATCGTGTTT......................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................CGATTTGATGTAGATCTTCCA...................................................................................................................................................................................................... 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAAGGGCTAAATTCTTGGAATTAA...................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ATCGTGTTTTACTCCCCTAAATACTTGT...................................... 28 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................TTCCATTATTATGGCTGGAGTAGTA.................................................................................................................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATT........................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGAGTAGTAAATAAACGTTCG...................................................................................................................................................................... 22 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................TGGCTGGAGTAGTAAATAAACGTTCGTTA................................................................................................................................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGCTAAATTCTTGGAATTAATTGG.................................................................. 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTTGGAATTAAGTG................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................ACTTCCATTATTATGGCTGGAGT...................................................................................................................................................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................GAGTAGTAAATAAACGT......................................................................................................................................................................... 17 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0
........................GAATTATCGATTTGATGTAGATCTT......................................................................................................................................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................TGTTGAGAATTATCGATTTGATGTAGAT............................................................................................................................................................................................................ 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................CATGGCTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................ATCGATTTGATGTAGATCTTCCA...................................................................................................................................................................................................... 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTAAGGGCTAAATTCTAGGAATTAAT..................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TTATCGATTTGATGTAGATCT.......................................................................................................................................................................................................... 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................ATTATTATGGCTGGAGTAGTAAATA.............................................................................................................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................GGCTGGAGTAGTAAATAAACGTTCGTTA................................................................................................................................................................... 28 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................TGATGTAGATCTTCCATTATTATGGC............................................................................................................................................................................................ 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTGGAGTAGTAAATAAACGTTCGT..................................................................................................................................................................... 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................CGATTTGATGTAGATCTTCCAT..................................................................................................................................................................................................... 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TAATTGTATCGTGTTTTACTCCCCT................................................ 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTTACTCCCCTAAATACTTCTTGTG.................................. 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TGGAATTAATTGTATCGTGTTTTA....................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ACTTTAAGGGCTAAATTCTTGGAAT......................................................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................ATCGATTTGATGTAGATCT.......................................................................................................................................................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................TATTATGGCTGGAGTAGTAAATAAACG.......................................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGCTAAATTCTTGGAATTA....................................................................... 21 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................CCATTTGATGTAGATCTTCCATTATT................................................................................................................................................................................................. 26 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................AAGGAATTAATTGTATCGTGTTTTACT..................................................... 27 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTTACTCCCCTAAATACTTCTTGTGCG................................ 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................CTGGAGTAGTAAATAAACGTTCGTTAAT................................................................................................................................................................. 28 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................TGTAGATCTTCCATTATTATGGC............................................................................................................................................................................................ 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:22188861-22189110 - dsi_7502 TTCTGCGAGGA--------GTAGGCGTCAACTCTTAATAGCTAAACTACATCTAGAAGGTAATAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGGCATTTATTC-AAAAT----TAACTACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCCGATTTAAGAAC-CTTAATTAACATAGCACAAAATGAGGGGATTTATGAAGAACACGCA--AATGTTTATATGAAGCAAAATTTCGAAAA--------AA
droSec2 scaffold_957:2630-2888 - TTCTGCGAGGAAGCTGAAAGTAGGCGTCAACTCTTAATAGCTAAACTACATCTAGAAGGTAGTAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGGCACTTATTCGAAAAT----TACCAACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCCGATTTAAGAAC-CTTAATTAACATAGCACAAAATGAGGGGATTTATGAAGAACACGCA--AATGTTTATATTAAGCAAAATTTCGAAAA--------AA
dm3 chrUextra:1164156-1164410 - TTCTGCGAGGAAGCTGAAAGTC---GGAAAGTCTTAATATCTAAACTACATCTAGAAGGTAATAGTTCCGACCTTATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGACACTTATTCGAAAAT----TACCAACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCTGATCTAAGAAC-CCTAATTAATATATCACAAAATGAGGGAATTTATGAAGAACACGCA--AATGCTTATATGAAGCAAAATTTCTAA-A--------AA
droEre2 scaffold_4929:26157949-26158205 - TTCTGCGAGGAAGCTGAAAGTAGGCGTCAACTCCTAATATCTAAGCTACATCTAGAAGGTAATAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGATACTTATTCGAAAAT----TCCCAACTAATTTGTTCTGTATTTTGGTTCATCATAAAATTCCTGATTTAAGAAC-CCTAATTAACATAGCACAAAATGAGGGTATTTATGAAGAACACGCT--AATGCTTATACGAAGCAAAATTTCGAA-AA---------
droYak3 3R:6976735-6976993 + TTCTGCGAAGAAGCAGAAAGACGACGTCAATTGCTGATTTCGAAATTACACCTAGAAGGTAACCATTCTGATTTTTTAATTTATGTTCAGGCTATTAGAGACTCTATCAAAATACTAATAAGAAAAC----TACCAATACAATTATTTACTATTTTGGTTCATCATGATATTGCAGACTTAAGATC-TTTAATTACTATTGCACAAAATGAGGGAATTTATGAAGAACATATT--AATTTTGAACTGAATAAAAATCCTGAA-AA-------TC
droEug1 scf7180000408945:6505-6762 - TTCTGCGAAGAAGCAGAGAGACGACGTCAAGTACTAATTTCGAAACTGCATCTAGAAGGTAACCAGCCAGATTTTCCTATTTATCTTCAGGCGATTAAAGTTTCCATTAAAATATTGATCAGAAATT----TACCAATACAACTATTCACTATTTTGGCTCATCATGACATTGCAGATTTATGATC-ATTAATCACTATCGCACAAAATGAGGGAATATATGAAGAACATGTT--AATTTTGAATTAAATAAAATTCCAGAA-AA--------T
droBia1 scf7180000301872:4251-4507 + TTCTGCAAGGAAGCGGAAAGACGACGTCAACTACTAATTTCAAAATTGCATCTGGAAGGTAACCAATCAGATTTTCTCAATTATGTGCAGGCGATTAAAGATTCCATTAAAATACTGATTAGAAAAT----TACCAATACAATTATTTACTATTTCGGCTCATCATGATATTGCAGACATAAGATC-ATTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGAATAAAAATACAGAA-AA---------
droEle1 scf7180000491345:4321-4581 - TTCTGCGAAGAAGCAGAAAGAGGAAGTCAAGTACTGATTTCGAAATTGCATCTGGAAGGTAACCAGCCAGATTTTCTTATTTATATTCAGGCGATTAAAGATTCCATTAAAATATTGATCAGAAAAT----TACCAATACAATTATTCATTATTTTGGTTCATAATGATATTACAGATCTAAGATC-GTTAATTACTCTTGCACAAAATGAGGGAATATATAAAGAACGCGTT--AATTTTGAATTAAA--AAAATCCAGAA-AACCGT---AA
droRho1 scf7180000777338:2350-2604 + TTCTGCGAAAAAGCTGAA--ACGACGTCAACTGCTGATTTCGAAATTGCATCTGGAAGGTAACCAATCAGATTTTCTTATTTATGTTCAGGCGATTAAAGATTCCATTAAAATACTGATTAGAAAAT----TACCTACACAATTATTTATTATTTTAGTTCATCATGATATTTCAGACTTAAGATC-GTTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATAAA--AATTTTGAATTGAACAAAAATCCAGAA-AA---------
droFic1 scf7180000453264:8376-8641 - TTCTGCGAAGAAGCAGAAAGACGACGTCAACTACTAATTTCAAATTTGCATCTGGAAGGTAACCAATCAGATTTTCTTATTTATGTGCAGGCAATTAAAGATTCCATAAAAATACTGATTAGAAAAT----TACCAATAAAACTATTTACTATTTTGGCTCATCATGATATTGCAGACTTAAGATC-ATTAATTACTATAGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGAATAAAAATACAGAA-AACCGTAATAA
droKik1 scf7180000299288:773-1023 + TTCTGCGAAGAAGCCGAGAGACGACGACAACTACTGATTTCCAAATTGCACCTGGAAGGTAACGAACCAGATTTTCTTATCTATGTTCAAGCTATTAAAGATTCCATTAAAATACTGATCAGAAAAT----TACCAATACAATTGTTTACTATTTTGGTTCATCATGATATTCAAGACTTAAGATC-GCTAATAACTATAGCACAAAATGAGGGAATATATGAAGAACACATT--AAATTTGAATTGAATAAAAATCC----------------
droAna3 scaffold_13079:299080-299337 + TTCTGCGAAGAAGCTGAAAGACGACGTCAACTGCTGATTTCGAAATTACATCTGGAAGGTAACCAAACTGATTTTGTTATTTATGTTCAGGCAATTAGAGATTCAATTAAAGTACTGATCAGAAAAT----TACCTATACAATTATTCACTATTTTGGCTCATCATAATATTACAGATTTAAGATC-GTTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGACCAAAAATCCAGAA-AA--------C
droBip1 scf7180000391595:4773-5018 + TTCTGCGAGGAGGCCGAGCGACGACGCCAAATACTCATCTCCAAATTAAATTTCGAAGGTAATCAATCAAACCTTATTATTTATTTGCAAGCGGTCAGAGATTCCATGAAAACACTAATTCGAAAAT----TACCAATTCAATTGTTTACAATTTTGGCCCATCACGACATTCCAGACTTTAGAACATCTAATTAACATTGCACAAAATGAGGGCATTTATGAAGAACATATT--AATTTTGAAACAAATAA----------------------
droPer2 scaffold_448:8092-8339 - TTCATAGAGGAACTAGAAATTAAGTCCAATGTTATAATAAGCAAACTAAATCTGGAAACTAGCGCAGAAAATAAGATAATCTTTAAAAACGCTCTGGAAAATGCCACCAGACATACCATA-GAAGATGCTCTACCCAATAGACTATTCATTATCTTAGCAAAGAAGGACATTTCTACTATGGCTAA-ACTAGAAAAATCAGCTCAAGAGTTAGGAATCTACGAAAATTTCGTA--AATGATAACAAGAATCA----------------------
droVir3 scaffold_13324:1701194-1701448 - TTTCTGGAAGAAGCAGAATACCGTAGGCAGATACTAATGAGTAAGCTTGAACTAGAAAATAACATTGACGAAGAAACATTGTATGCACGACTAATCAAAACAAGCATTGACGGCCTTATTTAAGAAT----TACACACAAACATTTGCATTCGAATTATAAATTGCGAAATTCCCCATTTAAGATC-TCTAATTAATATTTTGCAAAAAAAAACTCTATATAACGAACCCTGT--C---TTAATCCAAAT-AAAGTAAAACAAG--------AA
droMoj3 scaffold_6500:11860507-11860767 + TTTCTGGAAGAAGCAGAACACCGTAGGCAGACATTGATGAGTAAGCTAGAATTAGAAGATAATCAAGATGAGAAAATACTATATGATCGATTAATTAAAACAAGTATTGACGACCTAATTCAAAAAC----TTCCTACCAATATTTGTATTCGAATCATAAATTGCGAAATTCCAGATTTAAGATC-ACTAATTAACATATTACAAGAAAAAAATCTTTTTGATGAACCCTGTCAAAATTTAAATCAAAACAAAGTAAAGCAAG--------AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCTGCGAGGA--------GTAGGCGTCAACTCTTAATAGCTAAACTACATCTAGAAGGTAATAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGGCATTTATTC-AAAAT----TAACTACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCCGATTTAAGAAC-CTTAATTAACATAGCACAAAATGAGGGGATTTATGAAGAACACGCA--AATGTTTATATGAAGCAAAATTTCGAAAA--------AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................TTAATTAACATAGCACAAAATGAGGGGA..........................................................2833.331000000046000000000
.............................................................................................................................................................................................................................GAAGAACACGCA--AATGTT.................................1811.00100000000001000000
........................................................................................AAGCAATTAGGGACTCTATTAAGGC.................................................................................................................................................................2511.00100000001000000000
..................................TAATAGCTAAACTACATCTAGAAGG.......................................................................................................................................................................................................................2531.00300000020001000000
................................................................................................................................................................................................................TGAGGGGATTTATGAAGAACACGCA--AA.....................................2750.60300000001020000000
.............................................................................................................................................TTTGTTCTGTATTTTGGCTCATCATG...........................................................................................................2620.50100000001000000000
...............................................................................................................................................TGTTCTGTATTTTGGCTCATCATGAAAT.......................................................................................................2820.50100000000010000000
..............................................................................................................................................TTGTTCTGTATTTTGGCTCATCA.............................................................................................................2320.50100000010000000000
..........A--------GTAGGCGTCAACTCTTAATAGC.........................................................................................................................................................................................................................................2330.33100000000100000000
...........................................................................................................................................................................TCCCGATTTAAGAAC-CTTAATTAAC.............................................................................2530.33100000010000000000
.....................................................................................................................................................................TGAAATTCCCGATTTAAGAAC-CTTAA..................................................................................2630.33100000010000000000
........................................................................................................................................................................................AC-CTTAATTAACATAGCACAAAATGAG..............................................................2730.33100000000001000000
....................TAGGCGTCAACTCTTAATAGCTAAG.....................................................................................................................................................................................................................................2530.33100000001000000000
..........A--------GTAGGCGTCAACTCTTAATAGCTAAAC....................................................................................................................................................................................................................................2830.33100000010000000000
....................................................................................TTGCAAGCAATTAGGGACTCTATTA.....................................................................................................................................................................2540.25100000001000000000
.....................................................................................TGCAAGCAATTAGGGACTCTATTAAG...................................................................................................................................................................2640.25100000000010000000
................................................................................................................................................................................................................TGAGGGGATTTATGAAGAACACGCA--AATG...................................2940.25100000010000000000
...................................................................................TTTGCAAGCAATTAGGGACTCTAT.......................................................................................................................................................................2440.25100000010000000000
................................................................................TTATTTGCAAGCAATTAGGGACTCTAT.......................................................................................................................................................................2740.25100000000010000000
............................................................................TCATTTATTTGCAAGCAATTAGGGACTC..........................................................................................................................................................................2840.25100000000000010000
.............................................................................................................................................................GCTCATCATGAAATTCCCGATTTAAGA..........................................................................................2750.20100000001000000000
...................................................................................................................................................................................................ACATAGCACAAAATGAGGGGA..........................................................2160.17100000010000000000
.................................................................................................................................................................................................TAACATAGCACAAAATGAGGGGA..........................................................2360.17100000000010000000
.............................................................................................................................................................................................TAATTAACATAGCACAAAATGAGGGGA..........................................................2760.17100000001000000000
................................................................................................................................................................CATCATGAAATTCCCGAT................................................................................................1860.17100000000001000000
......................................................................................................................................................................................................TAGCACAAAATGAGGGGA..........................................................1860.17100000010000000000
.................................................................................TATTTGCAAGCAATTAGGGACTCTA........................................................................................................................................................................2570.14100000001000000000
.....................................................................................TGCAAGCAATTAGGGA.............................................................................................................................................................................1680.13100000000001000000
droSec2
TTCTGCGAGGAAGCTGAAAGTAGGCGTCAACTCTTAATAGCTAAACTACATCTAGAAGGTAGTAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGGCACTTATTCGAAAAT----TACCAACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCCGATTTAAGAAC-CTTAATTAACATAGCACAAAATGAGGGGATTTATGAAGAACACGCA--AATGTTTATATTAAGCAAAATTTCGAAAA--------AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................TTTGCAAGCAATTAGGGACTCTAT.......................................................................................................................................................................2450.2011000
......................................................................................................................................................................................................TAGCACAAAATGAGGGGATTT.......................................................21120.1722000
...................................................................................................................................................................................................ACATAGCACAAAATGAGGGGA..........................................................21120.1721001
..............................................................................................................................................TTGTTCTGTATTTTGGCTCATCAT............................................................................................................24200.1533000
..........................................................................................................................................................................TTCCCGATTTAAGAAC-CTTAATTAACA............................................................................2770.1411000
.....................................................................................................................................................................TGAAATTCCCGATTTAAGAAC-.......................................................................................21200.1022000
..................................................................................................................................................TCTGTATTTTGGCTCATCATG...........................................................................................................21200.1022000
..........................................................................................................................................................TTGGCTCATCATGAAATTCCC...................................................................................................21200.1022000
......................................................................................................................................................................................................TAGCACAAAATGAGGGGATTTATGA...................................................25100.1011000
.......................................................................................................................................................................AAATTCCCGATTTAAGAAC-CT.....................................................................................21200.1022000
..............................................................................................................................................TTGTTCTGTATTTTGGCTCATCATG...........................................................................................................25200.1022000
...........................................................................................................................................................TGGCTCATCATGAAATTCCCG..................................................................................................21200.1022000
.......................................................................................................................................................................................................AGCACAAAATGAGGGGATTTA......................................................21120.0811000
....................................................................................................................................................................................................CATAGCACAAAATGAGGGGAT.........................................................21120.0811000
..................................................................................................................................................................................................AACATAGCACAAAATGAGGGGA..........................................................22120.0811000
....................................................................................................................................................................................................CATAGCACAAAATGAGGGGATT........................................................22120.0811000
.....................................................................................................................................................................................................ATAGCACAAAATGAGGGGATT........................................................21120.0811000
..................................................................................................................................................................................................AACATAGCACAAAATGAGGGG...........................................................21120.0811000
................................................................................TTATTTGCAAGCAATTAGGGA.............................................................................................................................................................................21190.0511000
.......................................................................................................................................................................................................................................CA--AATGTTTATATTAAGCAAA....................21190.0510100
.......AGGAAGCTGAAAGTAGGCGTC......................................................................................................................................................................................................................................................21200.0510100
...................................................................................................................................................CTGTATTTTGGCTCATCATGA..........................................................................................................21200.0511000
..........................TCAACTCTTAATAGCTAAACTACATC..............................................................................................................................................................................................................................26200.0511000
..............TGAAAGTAGGCGTCAACTCTT...............................................................................................................................................................................................................................................21200.0511000
............................................................................................................................................ATTTGTTCTGTATTTTGGCTC.................................................................................................................21200.0511000
..................................TAATAGCTAAACTACATCTAGAAGGTA.....................................................................................................................................................................................................................27200.0511000
............................................................................................................................................ATTTGTTCTGTATTTTGG....................................................................................................................18200.0511000
.......................GCGTCAACTCTTAATAGCTAA......................................................................................................................................................................................................................................21200.0511000
....................TAGGCGTCAACTCTTAATAGCTAAAC....................................................................................................................................................................................................................................26200.0511000
....................TAGGCGTCAACTCTTAATAGC.........................................................................................................................................................................................................................................21200.0510001
..CTGCGAGGAAGCTGAAAGTAGG..........................................................................................................................................................................................................................................................22200.0511000
..........AAGCTGAAAGTAGGCGTCAAC...................................................................................................................................................................................................................................................21200.0511000
.........................................................................................................................................CTAATTTGTTCTGTATTTTGG....................................................................................................................21200.0511000
.................................................................................TATTTGCAAGCAATTAGGG..............................................................................................................................................................................19200.0511000
...........................................................................ATCATTTATTTGCAAGCAATT..................................................................................................................................................................................21200.0511000
.........................................TAAACTACATCTAGAAGGTA.....................................................................................................................................................................................................................20200.0511000
...............................................................................................................................................TGTTCTGTATTTTGGCTCATCAT............................................................................................................23200.0511000
.....................................................................................................................................CCAACTAATTTGTTCTGTATT........................................................................................................................21200.0511000
......................................AGCTAAACTACATCTAGAAGG.......................................................................................................................................................................................................................21200.0510010
dm3
TTCTGCGAGGAAGCTGAAAGTC---GGAAAGTCTTAATATCTAAACTACATCTAGAAGGTAATAGTTCCGACCTTATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGACACTTATTCGAAAAT----TACCAACTAATTTGTTCTGTATTTTGGCTCATCATGAAATTCCTGATCTAAGAAC-CCTAATTAATATATCACAAAATGAGGGAATTTATGAAGAACACGCA--AATGCTTATATGAAGCAAAATTTCTAA-A--------AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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droEre2
TTCTGCGAGGAAGCTGAAAGTAGGCGTCAACTCCTAATATCTAAGCTACATCTAGAAGGTAATAATACCGACCTCATCATTTATTTGCAAGCAATTAGGGACTCTATTAAGATACTTATTCGAAAAT----TCCCAACTAATTTGTTCTGTATTTTGGTTCATCATAAAATTCCTGATTTAAGAAC-CCTAATTAACATAGCACAAAATGAGGGTATTTATGAAGAACACGCT--AATGCTTATACGAAGCAAAATTTCGAA-AA---------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTCTGCGAAGAAGCAGAAAGACGACGTCAATTGCTGATTTCGAAATTACACCTAGAAGGTAACCATTCTGATTTTTTAATTTATGTTCAGGCTATTAGAGACTCTATCAAAATACTAATAAGAAAAC----TACCAATACAATTATTTACTATTTTGGTTCATCATGATATTGCAGACTTAAGATC-TTTAATTACTATTGCACAAAATGAGGGAATTTATGAAGAACATATT--AATTTTGAACTGAATAAAAATCCTGAA-AA-------TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................GAACATATT--AATTTTGAACTGAAT........................2450.40202000000000
...................................GATTTCGAAATTACACCTAGAAGG.......................................................................................................................................................................................................................2440.25100100000000
............................................................................................................................................................................................TTAATTACTATTGCACAAAATGAGGG............................................................2640.25101000000000
........................................CGAAATTACACCTAGAAGGTAACCA.................................................................................................................................................................................................................2540.25101000000000
.....................................TTTCGAAATTACACCTAGAAGG.......................................................................................................................................................................................................................2240.25101000000000
.....................................................................................................................................................................TGATATTGCAGACTTAAGATC-TTTAA..................................................................................2640.25101000000000
...............................TGCTGATTTCGAAATTACACCTAGAAGG.......................................................................................................................................................................................................................2840.25100100000000
................................................................................................................................................................CATCATGATATTGCAGACTTAAGATC-T......................................................................................2750.20101000000000
.................................................................................................................................................................................................................................................GAACTGAATAAAAATCCTGAA-AA-------..2350.20101000000000
.............................ATTGCTGATTTCGAAATTACACC..............................................................................................................................................................................................................................2350.20101000000000
................................................................................................................................................................CATCATGATATTGCAGACTTAAGATC-.......................................................................................2650.20100100000000
................................................................................................................................................................................................................................GAACATATT--AATTTTGAACTGAATA.......................2550.20101000000000
droEug1
TTCTGCGAAGAAGCAGAGAGACGACGTCAAGTACTAATTTCGAAACTGCATCTAGAAGGTAACCAGCCAGATTTTCCTATTTATCTTCAGGCGATTAAAGTTTCCATTAAAATATTGATCAGAAATT----TACCAATACAACTATTCACTATTTTGGCTCATCATGACATTGCAGATTTATGATC-ATTAATCACTATCGCACAAAATGAGGGAATATATGAAGAACATGTT--AATTTTGAATTAAATAAAATTCCAGAA-AA--------TSizeHit CountTotal NormTotal
No Reads
droBia1
TTCTGCAAGGAAGCGGAAAGACGACGTCAACTACTAATTTCAAAATTGCATCTGGAAGGTAACCAATCAGATTTTCTCAATTATGTGCAGGCGATTAAAGATTCCATTAAAATACTGATTAGAAAAT----TACCAATACAATTATTTACTATTTCGGCTCATCATGATATTGCAGACATAAGATC-ATTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGAATAAAAATACAGAA-AA---------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCTGCGAAGAAGCAGAAAGAGGAAGTCAAGTACTGATTTCGAAATTGCATCTGGAAGGTAACCAGCCAGATTTTCTTATTTATATTCAGGCGATTAAAGATTCCATTAAAATATTGATCAGAAAAT----TACCAATACAATTATTCATTATTTTGGTTCATAATGATATTACAGATCTAAGATC-GTTAATTACTCTTGCACAAAATGAGGGAATATATAAAGAACGCGTT--AATTTTGAATTAAA--AAAATCCAGAA-AACCGT---AASizeHit CountTotal NormTotal
No Reads
droRho1
TTCTGCGAAAAAGCTGAA--ACGACGTCAACTGCTGATTTCGAAATTGCATCTGGAAGGTAACCAATCAGATTTTCTTATTTATGTTCAGGCGATTAAAGATTCCATTAAAATACTGATTAGAAAAT----TACCTACACAATTATTTATTATTTTAGTTCATCATGATATTTCAGACTTAAGATC-GTTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATAAA--AATTTTGAATTGAACAAAAATCCAGAA-AA---------SizeHit CountTotal NormTotal
No Reads
droFic1
TTCTGCGAAGAAGCAGAAAGACGACGTCAACTACTAATTTCAAATTTGCATCTGGAAGGTAACCAATCAGATTTTCTTATTTATGTGCAGGCAATTAAAGATTCCATAAAAATACTGATTAGAAAAT----TACCAATAAAACTATTTACTATTTTGGCTCATCATGATATTGCAGACTTAAGATC-ATTAATTACTATAGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGAATAAAAATACAGAA-AACCGTAATAASizeHit CountTotal NormTotal
No Reads
droKik1
TTCTGCGAAGAAGCCGAGAGACGACGACAACTACTGATTTCCAAATTGCACCTGGAAGGTAACGAACCAGATTTTCTTATCTATGTTCAAGCTATTAAAGATTCCATTAAAATACTGATCAGAAAAT----TACCAATACAATTGTTTACTATTTTGGTTCATCATGATATTCAAGACTTAAGATC-GCTAATAACTATAGCACAAAATGAGGGAATATATGAAGAACACATT--AAATTTGAATTGAATAAAAATCC----------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTCTGCGAAGAAGCTGAAAGACGACGTCAACTGCTGATTTCGAAATTACATCTGGAAGGTAACCAAACTGATTTTGTTATTTATGTTCAGGCAATTAGAGATTCAATTAAAGTACTGATCAGAAAAT----TACCTATACAATTATTCACTATTTTGGCTCATCATAATATTACAGATTTAAGATC-GTTAATTACTATTGCACAAAATGAGGGAATATATGAAGAACATATT--AATTTTGAATTGACCAAAAATCCAGAA-AA--------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............TGAAAGACGACGTCAACTGCTGAT............................................................................................................................................................................................................................................2440.251100000
droBip1
TTCTGCGAGGAGGCCGAGCGACGACGCCAAATACTCATCTCCAAATTAAATTTCGAAGGTAATCAATCAAACCTTATTATTTATTTGCAAGCGGTCAGAGATTCCATGAAAACACTAATTCGAAAAT----TACCAATTCAATTGTTTACAATTTTGGCCCATCACGACATTCCAGACTTTAGAACATCTAATTAACATTGCACAAAATGAGGGCATTTATGAAGAACATATT--AATTTTGAAACAAATAA----------------------SizeHit CountTotal NormTotal
No Reads
droPer2
TTCATAGAGGAACTAGAAATTAAGTCCAATGTTATAATAAGCAAACTAAATCTGGAAACTAGCGCAGAAAATAAGATAATCTTTAAAAACGCTCTGGAAAATGCCACCAGACATACCATA-GAAGATGCTCTACCCAATAGACTATTCATTATCTTAGCAAAGAAGGACATTTCTACTATGGCTAA-ACTAGAAAAATCAGCTCAAGAGTTAGGAATCTACGAAAATTTCGTA--AATGATAACAAGAATCA----------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................TGTTATAATAAGCAAACTAAATCTGGAA.........................................................................................................................................................................................................................28200.102020000
.............................TGTTATAATAAGCAAACTAAATCTGG...........................................................................................................................................................................................................................26200.051010000
droVir3
TTTCTGGAAGAAGCAGAATACCGTAGGCAGATACTAATGAGTAAGCTTGAACTAGAAAATAACATTGACGAAGAAACATTGTATGCACGACTAATCAAAACAAGCATTGACGGCCTTATTTAAGAAT----TACACACAAACATTTGCATTCGAATTATAAATTGCGAAATTCCCCATTTAAGATC-TCTAATTAATATTTTGCAAAAAAAAACTCTATATAACGAACCCTGT--C---TTAATCCAAAT-AAAGTAAAACAAG--------AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................TAATGAGTAAGCTTGAACTAGAAAAT......................................................................................................................................................................................................................26118.0018002000001000100000000000030600021001100000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAAA.......................................................................................................................................................................................................................25111.0011002000000000000000000000102210002001000000000000000000000000000
................................................................................................................................................TTGCATTCGAATTATAAATTGCGA..........................................................................................................24310.00300000200000000000000000016612200000000100000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAA........................................................................................................................................................................................................................2418.008001000000000000000000000203100000010000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAA.........................................................................................................................................................................................................................2315.005001000000000000000000000102100000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAAATA.....................................................................................................................................................................................................................2715.005000000000000000000000000101001100000010000000000000000000000000
................................................................................................................................................TTGCATTCGAATTATAAATTGCGAAA........................................................................................................2614.004000000000000000000000000012000100000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGA..........................................................................................................................................................................................................................2214.004001000000000000000000000001100000010000000000000000000000000000
................................................................................................................................................TTGCATTCGAATTATAAATTGCGAA.........................................................................................................2514.004001000000000000000000000012000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAG...........................................................................................................................................................................................................................2114.004000000000020000000000000001010000000000000000000000000000000000
...................................................................................TGCACGACTAATCAAAACAAGCATTG.....................................................................................................................................................................2613.003003000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................C-TCTAATTAATATTTTGCAAAAAAAAAC............................................................2813.003001000000000000000000000001000001000000000000000000000000000000
...................................................................................TGCACGACTAATCAAAACAAGCATTGACC..................................................................................................................................................................2912.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATATAACGAACCCTGT--C---TTAATCCAA..........................2612.002000000000000000000000000010010000000000000000000000000000000000
.................................................................................................................................................TGCATTCGAATTATAAATTGCGAA.........................................................................................................2412.002000000000000000000000000001000000000100000000000000000000000000
.......................................................................................................................TTAAGAAT----TACACACAAACATTTGCA.............................................................................................................................2612.002000000000000000000000000000200000000000000000000000000000000000
...................................................................................TGCACGACTAATCAAAACAAGCATTGA....................................................................................................................................................................2712.002001000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATATAACGAACCCTGT--C---TTAATCCAAA.........................2712.002001000000000000000000000001000000000000000000000000000000000000
...................................................................................TGCACGACTAATCAAAACAAGC.........................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTA............................................................................................................................................................................................................................2012.002000010000000000000000000000000000000100000000000000000000000000
....................................................................................GCACGACTAATCAAAACAAGCATTG.....................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAAATCC....................................................................................................................................................................................................................2812.002000000000000000000000000000002000000000000000000000000000000000
................................................................................................................................................TTGCATTCGAATTATAAATTGCG...........................................................................................................2331.675001000000000000000000000000100000030000000000000000000000000000
....................................................................................................................................................................................AAGATC-TCTAATTAATATTTTG.......................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................AAGATC-TCTAATTAATATTTTGCAAAAA.................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CTCTATATAACGAACCCTGT--C---TTAATC.............................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACT.............................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
................................................................................GTATGCACGACTAATCAAAACA............................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................CGACTAATCAAAACAAGCATTGACGGCC...............................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................GCACGACTAATCAAAACAAGCATTGATC..................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................ATTCGAATTATAAATTGCGAAATTCCC...................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTAAGAAT----TACACACAAACATTTGCAA............................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAT........................................................................................................................................................................................................................2411.001000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AAGATC-TCTAATTAATATTTTGCA.....................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................ATATAACGAACCCTGT--C---TTAATCCAT..........................2611.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................GACTAATCAAAACAAGCATTGACG..................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................C-TCTAATTAATATTTTGCAAAAAAAAAAC...........................................................2911.001000000000000000000000000000100000000000000000000000000000000000
...................................................................................TGCACGACTAATCAAAACAAGCATT......................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAT.........................................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................TTAAGAAT----TACACACAAACATTTG...............................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TGCATTCGAATTATAAATTGCGAAA........................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAAAAA......................................................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
................................................................TTGACGAAGAAACATTGTATGCA...........................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................ATCAAAACAAGCATTGACGGCCT..............................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................GCAGATACTAATGAGTAAGCTTGT................................................................................................................................................................................................................................2411.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................CCTGT--C---TTAATCCAAAT-AAAGT..................2211.001000000000000000000000000001000000000000000000000000000000000000
....................................ATGAGTAAGCTTGAACTAGAAAATA.....................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................GCAGATACTAATGAGTAAGCTTGAAC..............................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
...............GAATACCGTAGGCAGATACTAATGAGT........................................................................................................................................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
.......................................................................................CGACTAATCAAAACAAGCAT.......................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CCTTATTTAAGAAT----TACACACAAACA...................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AAGATC-TCTAATTAATATTTTGCAA....................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
..................................TAATGAGTAAGCTTGAACTAGAATG.......................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................C-TCTAATTAATATTTTGCAAAAAAAAA.............................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................GACTAATCAAAACAAGCATTGACGGCC...............................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AAT----TACACACAAACATTTGCATT...........................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................ATTGTATGCACGACTAATCAAAACAAT..........................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................TGCATTCGAATTATAAATTGCGA..........................................................................................................2330.672000000000000000000000000000100000000100000000000000000000000000
.TTCTGGAAGAAGCAGAATACCGTAGGC......................................................................................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
.TTCTGGAAGAAGCAGAATACCGTATT.......................................................................................................................................................................................................................................................2620.501000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................AACATTTGCATTCGAATTATAAATT..............................................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TGCATTCGAATTATAAATTGCGAATA.......................................................................................................2630.331000000000000000000000001000000000000000000000000000000000000000
droMoj3
TTTCTGGAAGAAGCAGAACACCGTAGGCAGACATTGATGAGTAAGCTAGAATTAGAAGATAATCAAGATGAGAAAATACTATATGATCGATTAATTAAAACAAGTATTGACGACCTAATTCAAAAAC----TTCCTACCAATATTTGTATTCGAATCATAAATTGCGAAATTCCAGATTTAAGATC-ACTAATTAACATATTACAAGAAAAAAATCTTTTTGATGAACCCTGTCAAAATTTAAATCAAAACAAAGTAAAGCAAG--------ATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................GAATTAGAAGATAATCAAGCGT............................................................................................................................................................................................................2220.501000001
...........................................................................................................................AAAC----TTCCTACCAATATTTGTATTCGA........................................................................................................................27130.385400010
..................................................................................................................................................................................................................................................AATCAAAACAAAGTAAAGCAAG--------A.23140.365500000
...................................................................................................................................................................................................ACATATTACAAGAAAAAAATCTTTT......................................................2570.292200000
...........................................................................................................................AAAC----TTCCTACCAATATTTGTATTCGAA.......................................................................................................................28130.233300000
..................................................................................................................................................................................................................................................AATCAAAACAAAGTAAAGCAAG--------AT24140.213200010
..............................ACATTGATGAGTAAGCTAGAATTAGA..........................................................................................................................................................................................................................26150.203200010
...........................................................................................................................AAAC----TTCCTACCAATATTTGTATTC..........................................................................................................................25130.152100010
...........................................................................................................................AAAC----TTCCTACCAATATTTGTAT............................................................................................................................23130.152200000
...........................................................................................................................AAAC----TTCCTACCAATATTTGTATTCGAT.......................................................................................................................28130.081100000
...........................................................................................................................AAAC----TTCCTACCAATATTTG...............................................................................................................................20130.081100000
.......................................................................................................................TCAAAAAC----TTCCTACCAATATTTGTATT...........................................................................................................................28130.081100000
.....................................................................................................................................................................................................................ATCTTTTTGATGAACCCTGTCAAA.....................................24130.081100000
....................................................................................................CAAGTATTGACGACCTAATTCAAAAAC----T..............................................................................................................................................28130.081000010
.......................................................................................................................................................................AAATTCCAGATTTAAGATC-ACTAATTA...............................................................................27150.071100000
.....................................................................................................................................CCTACCAATATTTGTATTCGAATCAC...................................................................................................................26150.071000010
..................................................................................................................................................................TTGCGAAATTCCAGATTTAAGATC-AC.....................................................................................26150.071000010
..........................................................................................................................................................................TTCCAGATTTAAGATC-ACTAA..................................................................................21150.071000010
..................................TGATGAGTAAGCTAGAATT.............................................................................................................................................................................................................................19150.071100000
......................................................................................................................................................................GAAATTCCAGATTTAAGATC-ACTAA..................................................................................25150.071100000
..............................ACATTGATGAGTAAGCTAGAATTAGAA.........................................................................................................................................................................................................................27150.071000001
...............................CATTGATGAGTAAGCTAGAATTAG...........................................................................................................................................................................................................................24150.071100000
..................................TGATGAGTAAGCTAGAATTAGA..........................................................................................................................................................................................................................22150.071100000
...................................GATGAGTAAGCTAGAATTAGA..........................................................................................................................................................................................................................21150.071100000
..............................................................................................TTAAAACAAGTATTGACGACCTAAT...........................................................................................................................................................25150.071100000
..TCTGGAAGAAGCAGAACACCGTAGG.......................................................................................................................................................................................................................................................25150.071000001
...........................................................................................TAATTAAAACAAGTATTGACGACCTA.............................................................................................................................................................26150.071100000
...........................................................................................TAATTAAAACAAGTATTGACGACC...............................................................................................................................................................24150.071100000
..TCTGGAAGAAGCAGAACACCGTAGGC......................................................................................................................................................................................................................................................26150.071000001
..............................................................................................................................................................TAAATTGCGAAATTCCAGATTTAAGATC-.......................................................................................28150.071000010
..................................TGATGAGTAAGCTAGAATTAGAA.........................................................................................................................................................................................................................23150.071100000
...........................CAGACATTGATGAGTAAGCTAGAAT..............................................................................................................................................................................................................................25150.071000001
...................................................................................................................................TTCCTACCAATATTTGTAC............................................................................................................................19150.071000010
...........................................................................................................................................................................TCCAGATTTAAGATC-ACTAATTA...............................................................................23150.071100000
.....................................................................................................................................CCTACCAATATTTGTATTCGAATC.....................................................................................................................24150.071100000
..........................................................................................TTAATTAAAACAAGTATTGACGACC...............................................................................................................................................................25150.071100000
............................................................................................AATTAAAACAAGTATTGACGACC...............................................................................................................................................................23150.071100000
.....................................................................................................................................CCTACCAATATTTGTATTCGAATCATA..................................................................................................................27150.071100000
................................ATTGATGAGTAAGCTAGA................................................................................................................................................................................................................................18160.061100000
..TCTGGAAGAAGCAGAACACCGTAG........................................................................................................................................................................................................................................................24160.061100000
..TCTGGAAGAAGCAGAACACCGT..........................................................................................................................................................................................................................................................22160.061100000

Generated: 05/19/2015 at 01:04 AM