ID:

dsi_74

 Coordinate:

2l:2657289-2657377 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.5 -22.2 -22.2

Flybase annnotation

Antisense to exon [2l_2656001_2657470_-]; Antisense to five_prime_UTR [2l_2656977_2657470_-]

No Repeatable elements found

Sense Strand Reads

TTATTGCCACGGAGCAACTTGATCTTCCGATCAGAAGAGCAGTTTTTCTGGTTTGAAGATCTCTATGATTTCCATATGTTGCAGCAGGGTTCAAAGTCCACCTATGTGCAGCTCCTTCTAATTGGATTTTCACTGGCCCTAATTAATTAAAGCGATCTATGGCACTAAACACTTTTGCATTTCCCTGTA
***********************************..............(((((((((((((....((((.......((((((...((((.........))))...)))))).......)))))))))))))..))))...............************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O002
Head
 M024
male body		 SRR902009
testis
 M053
female body
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 GSM343915
embryo
.....................................................................................................................CTAATTGGATTTTCACTGGCC................................................... 21 0 1 15.00 15 13 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTAATTGGATTTTCACTGGCCT.................................................. 22 1 1 13.00 13 12 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................AATTGGATTTTCACTGGCCCT................................................. 21 0 1 10.00 10 8 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TAATTGGATTTTCACTGGCCC.................................................. 21 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0
...........................................TTTTCTGGTTTGAAGATCTCT............................................................................................................................. 21 0 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTAAAGCGATCTATGGCACTA...................... 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATTAAAGCGATCTATGGCAC........................ 21 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CGATCTATGGCACTAAACACT................ 21 0 1 3.00 3 0 0 0 1 0 2 0 0 0 0 0 0
..................................................GTTTGAAGATCTCTATGATTT...................................................................................................................... 21 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TAAAGCGATCTATGGCACTAA..................... 21 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
........................TTCCGATCAGAAGAGCAGTTT................................................................................................................................................ 21 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0
......CCACGGAGCAACTTGATCTTC.................................................................................................................................................................. 21 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................AATTAAAGCGATCTATGGCACT....................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GTGCACCTCCTTCTAATTGGA............................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 1 1 0 0 0
....................................................................................................................................................AAAGCGATCTATGGCACTA...................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CGATCTATGGCGCTGAACACT................ 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTATGATTTCCATATGTTGC........................................................................................................... 20 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................TAATTAAAGCGATCTATGGCA......................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................AAGTCCACCTATGTGCAGCTC........................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................AGTTTTTCTGGTTTGAAGATC................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................CCGATCAGAAGAGCAGTTTTTC............................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATTAAAGCGATCTATGGCACC....................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCTAATTGGATTTTCGCTGGC.................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................AAAGCGATCTATGGCACTAT..................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................AATTAAAGCGATCTATGGC.......................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTGGATTTTCACTGGCCCT................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................ATCTTCCGATCAGAAGAGCA.................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................CCTTCTAATTGGATTTTCACTG...................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................GCTCTTCCTATCAGAAGAGCAGA.................................................................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TAAAGCGATCTATGGCACTA...................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................AGAAGAGCAGTTTTTCTGGTTT....................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGCGATCTATGGCACTAAAC................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................AGAAGAGCAGTTTTTCTGGTT........................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................TTCCGATCAGAAGAGCAGTTTT............................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................AAAGCGATCTATGGCACTAAAC................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ATTAAAGCGATCTATGGCACT....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CTAAACACTTTTGCATTTCCC.... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................GTTTGAACATCTCTATGATTT...................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................CAGGGTTCAAAGTCCACCTAT.................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGCGATCTATGGCACTA...................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTTTGAAGATCTCTATGATT....................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................ATTAAATCGATCTATGGCACC....................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ATTGGATTTTCACTGGCCCTA................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................TCTCTATGATTTCCATATGTTGC........................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................ATATGTTGCAGCAGGGTT.................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................TCTAATTGGATTTTCACTGGCC................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTAATTGGATTTTCACTGGCCC.................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GGTTTGAAGATCTCTATGATTT...................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACACTTTTGCATTTCCCTGT. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................TTCCGATCAGAAGGGCAGTTT................................................................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................CATATGTTGCAGCAGGGTTCA................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GCCCTAATTAATTAAAGCGATCT............................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................CTCTATGATTTCCATATGTTG............................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCTAATTGGATTTTCACTGGCC................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TATGTGCAGCTCCTTCTA..................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................TCCGATCAGAAGAGCAGTTT................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................ATTTCCATATGTTGCAGCAGG..................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
................................AGAAGAGCAGTTTTTCTG........................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................TTTCTGGTTTGAAGATCTCTA............................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......CACGGAGCAACTTGATCTTC.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................TCCGATCAGAAGAGCAGTT................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TAATTAATTAAAGCGATCTATGG........................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................TTTGAAGATCTCTATGATT....................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................AAGAGCAGTTTTTCTGGTTTG...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............AACTTGATCTTCCGATCAGAA......................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................TGGTTTGAAGATCTCTATGAT........................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................TGAAGATCTCTATGATTTCCA................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................TCCACCTATGTGCAGCTCCTTC....................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................AAGTCCACCTATGTGCAGC............................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTAATTAAAGCGATCTATGGC.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TTCCGATCAGAAGAGCAGTT................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................ATTGGATTTTCACTGGCCT.................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTTTGAAGATCTCTATGA......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TGGATTTTCACTGGCCCTAATT............................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
TTATTGCCACGGAGCAACTTG........................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................TTGAAGCGATCTATGGCACT....................... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................CTCTATGATTTCCATATGTTGC........................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GCCCTAATTAATTGAAGCGAT................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................TGGCACTAAACACTTTTGCAT......... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................ATTAAATCGATCTATGGCACT....................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ATTTTCACTGTCCCTA................................................ 16 1 6 0.33 2 0 0 0 0 0 0 0 0 1 1 0 0
....................................................TTGTAGATCTATATGATTT...................................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................AGCGATCTATGGCACTGGGC................... 20 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................GAAGAGTAGTTTTTCT............................................................................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................ACCTCTGTAAAGCTCCTTC....................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
............................AATCAGAAGAGGAGTTTTTTT............................................................................................................................................ 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................TGAGCAGTTTTTCTGGCTTT...................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...............ACCTTGATCTTCCGAG.............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
......................TCTAACGGTCAGAAGAG...................................................................................................................................................... 17 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

#############################################################################################################################################################################################
AATAACGGTGCCTCGTTGAACTAGAAGGCTAGTCTTCTCGTCAAAAAGACCAAACTTCTAGAGATACTAAAGGTATACAACGTCGTCCCAAGTTTCAGGTGGATACACGTCGAGGAAGATTAACCTAAAAGTGACCGGGATTAATTAATTTCGCTAGATACCGTGATTTGTGAAAACGTAAAGGGACAT
************************************..............(((((((((((((....((((.......((((((...((((.........))))...)))))).......)))))))))))))..))))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 O001
Testis
 SRR902008
ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.......................GAAGGCTAGTCTTCTCGTCAA................................................................................................................................................. 21 0 1 19.00 19 10 7 0 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CTAAAAGTGACCGGGATTAAT............................................ 21 0 1 9.00 9 8 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTCTAGAGATACTAAAGGTA.................................................................................................................. 21 0 1 9.00 9 8 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................TCGTCCCAAGTTTCAGGTGGA...................................................................................... 21 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................GAAGGCTAGTCTTCTCGTCAAAAAG............................................................................................................................................. 25 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TAATTAATTTCGCTAGATACC........................... 21 0 1 4.00 4 0 0 0 3 0 0 0 0 1 0 0 0 0 0
..........................GGCTAGTCTTCTCGTCAAAAA.............................................................................................................................................. 21 0 1 3.00 3 1 1 0 0 0 0 0 0 0 1 0 0 0 0
..........CCTCGTTGAACTAGAAGGCTA.............................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACGGTGCCTCGTTGAACTAGAAGGCTAG............................................................................................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
......GGTGCCTCGTTGAACTAGAAG.................................................................................................................................................................. 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................GTATACAACGTCGTCCCAAGTTTC............................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGGAAGATTAACCTAAAAGTG........................................................ 21 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1
...............................................GACCAAACTTCTAGAGATACTAA....................................................................................................................... 23 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................ACTAAAGGTATACAACGTCGTCCCAAGT................................................................................................ 28 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0
..........................................................................ATACAACGTCGTCCCAAGTTT.............................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CCCAAGTTTCAGGTGGATA.................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CAAACTTCTAGAGATACTA........................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................AGATTAACCTAAAAGTGACCGGGAT................................................ 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.................................................CCAAACTTCTAGAGATACTAA....................................................................................................................... 21 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................CGGGATTAATTAATTTCGCTA................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TAGAAGGCTAGTCTTCTCGTCAAA................................................................................................................................................ 24 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
..........................GGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TAGAAGGCTAGTCTTCTCGTC................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TCGTCCCAAGTTTCAGGTGGATACACG................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......GGTGCCTCGTTGAACTAGAAGGCTAGTC........................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGATACCGTGATTTGTGAA............... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................ACAACGTCGTCCCAAGTTTCA............................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................CGTCGTCCCAAGTTTCAGGTG........................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................CGCTAGGTACCGTGATTTGTG................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....TCGGTGCCTCGTTGAACTAGAA................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................GAAGGCTAGTCTTCTCGT.................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GGTGGATACACGTCGAGGAAG....................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AGACCAAACTTCTAGAGATA........................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GGAAGGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................CTAGTCTTCTCGTCAAAAAG............................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................AAGACCAAACTTCTAGAGATA........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CTTCTAGAGATACTAAAGGT................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................ACTAAAGGTATACAACGTCGT....................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................CTAAAAGTGACCGGGATTAGT............................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAAATTAATTTCGCTAGATA............................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CAGGTGGATACACGTCGA............................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTCTAGAGATACTAAAGGTATACAACGT.......................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................GACCAAACTTCTAGAGAT............................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CTAGAAGGCTAGTCTTCTCGTC................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TGGATACACGTCGAGGAAGATTAACCTA.............................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TACAACGTCGTCCCAAGTTT.............................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................ACTAGAAGGCTAGTCTTCTC...................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ATTTCGCTAGATACCGTGATTT.................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................GGAGGCTAGTCTTCTCGTCAA................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TCTAGAGATACTAAAGGTATA................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....ACGGTGCCTCGTTGAACTAG..................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTCGCTAGATACCGTGA....................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................ACGTCGAGGAAGATTAACCTA.............................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................GAACTAGAAGGCTAGTCTTCTC...................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................AGAGATACTAAAGGTATACAA............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................GAAGGCTAGTCTTCTCGTCAAA................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCTAAAAGTGACCGGGATTAA............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTCGCTAGATACCGTGATTTGTGAAA.............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ATACCGTGATTTGTGAAAAC............ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................TAGGAGGCTAGTCTTCTCGTCAAA................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TCTAGAGATACTAAAGGTAT................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTCTAGAGATACTAAAGGTAT................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................GAAGGCTAGTCTTCTCGTC................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GGCTAGTCTTCTCGTCAAA................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCTAGATACCGTGATTTGTG................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TCCCAAGTTTCAGGGGGATAC................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AACGTCGTCCCAAGTTTCAGGTGGATACA.................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AGGGAGATTAACCTGAAAGT......................................................... 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TTAATTAATTTCGCTAGATACCGT......................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TCGTCCCAAGTTTCAGGTGGAT..................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GATACCGTGATTTGTGAAAAC............ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................TAGGCTAGTCTTCTCGTCAGA................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................AATACACGTGGAGGAAGATTAACCTAA............................................................. 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................CGTCCCAAGTTTCAGGTGGA...................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTCGCTAGATACCGTGATTTGTG................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................ATACACGTCGAGGAAGATTAA.................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................ACACGTCGAGGAAGATTAA.................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................AGAAGGCTAGTCTTCTCG..................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................TGCTAGTCTTCTCGTCAGAAAGG............................................................................................................................................ 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GTGAAAACGTAAAGGGAC.. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................GTCGAGGAAGATTAACCT............................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGTGACCGGGATTAATTAACT....................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................CGTCCCAAGTTTCAGGTGGATACACGT............................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TCCCAAGTTTCAGGTGGATAC................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AGAAGGCTAGTCTTCTCGTCAAAAAG............................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................AAGGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GGGTTAATTAATTTCGCTAGATA............................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AATAACGGTGCCTCGTTGAAC........................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................TTTGGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................AGACCAAACTTCTAGAGAT............................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TCTTCTCGTCAAAAAGACCAAACTTC................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................AAGGCTAGTCTTCTCG..................................................................................................................................................... 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTAATTTCGCTAGATACC........................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GTCAAAAAGACCAAACTTCTA................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................CCTAAAAATGACCGGGATTAA............................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................ATACAACGTCGTCCCAAGTTTCAGGT......................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................CGTCGAGGAAGATTAACCTAA............................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................AAGGCTAGTCTTCTCGTCAA................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACGTCGTCCCAAGTTTCAGG.......................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAAGTGACCGGGATTAATTAA......................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................TCGTCCCAAGTTTCAGGTGGATA.................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....CGGTGCCTCGTTGAACTAGAAGGCTAG............................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................CCAAACTTCTAGAGATGCTAA....................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...AACGGTGCCTCGTTGAACTAGAAGGCT............................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................TGGATACACGTCGAGGAAGAT..................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AATTAATTTCGCTAGATACCGTGATT..................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................AAAGACCAAACTTCTAGAG.............................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................TCAAAAAGACCAAACTTCTAG................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....CGGTGCCTCGTTGAACTAGAA................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAGTGACCGGGATTAATTAAT........................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................AGAAGGCTAGTCTTCTCGTCAAAA............................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GGGATTAATTAATTTCGCT.................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CGAGGAAGATTAACCTAAAAGTGA....................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................CGTCAAAAAGACCAAACTTCTA................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................AGTTTCAGGTGGATACACGTC.............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CGGTGCCTCGTTGAACTAG..................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CGTCCCAAGTTTCAGGTGGATC.................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACCTAAAAGTGCCCGGCA................................................. 18 2 5 0.80 4 0 1 0 0 0 0 0 0 3 0 0 0 0 0
..................................................CCAAATTCTAGAGATACT......................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................CCTAAAAGTGCCCGGCA................................................. 17 2 10 0.30 3 0 0 0 0 0 1 0 0 2 0 0 0 0 0
..............................AGTGTTCTCGTCAGAAA.............................................................................................................................................. 17 2 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................CCTAAAAGTGTCCGGCA................................................. 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................AACTTCTATAGATAC.......................................................................................................................... 15 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................AGATTGCCAGTCTTCTCG..................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:2657239-2657427 + dsi_74 T-TATTGCCACGGAGCAACTTGATCTTCCGAT----CAGAAGAGCAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCAGC--TCCTTCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------ACACTTT-TGCATTTCCCTGTA
droSec2 scaffold_5:935785-935972 + T-TATTGCCACGGAGCAACTTGATCTTCCGAT----C-GAAGAGCAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCACC--TCCTTCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------TCACTTT-TGCATTTCCCTGTA
dm3 chr2L:2769826-2770022 + A-TATTGCCACGGAGCAACTTGATCTTGCGAT----CAAAAGAGTAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCACC--TCCTTTG-AA-----TTGAA----TT--TTCA-CTAGCCCTACAGCC-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------ATACTTT-TGCATTTCCCTGTA
droEre2 scaffold_4929:2822651-2822847 + T-TATTGCCACGGAGGAACTTGATCTTCGTGT----CAGCAGAGCAGTTTTACTGGTT-T----GAAGATCTT-TATGATTTCCATATACTGCAG-C-AGGGTTCAAAGTCCGTCTATGTGCACC--TAAGCTT-TT-----TGCGG----TT--TTTA-CTGGCCCTACAGCC-----CTAA--------TTAATTAAA-GTT-ATCTATGGTACTAA--------AGTCTTC-TGTATTTCCCTGTA
droYak3 2L:2765401-2765597 + T-TTTTGCCACGGAGGAACTTGATCTTCGAGT----CAGCAGAGCAGTTTTACTGGTT-T----AAAGATCTT-TATGATTTCCATATGTTGCAG-C-AGGGTCCAAAGTCCGCCTATGTGCACC--TGCGTCT-TA-----TGCGG----TT--TTTA-CTGGCCCTACAGCC-----CTAA--------TTAATTAAA-GTG-ATTTATGGCACTAA--------AGTCTTTCTGTATTGCCCTGT-
droEug1 scf7180000409554:3340946-3341142 - A-TATTGCCACGAAGGAACTTGATCTTG---T----CAGCAGAGCAGTATTACTGGTT-T----GATGATCTT-TATGATTTCCATATGTTGCAT-C-GGGGTTCAAAGTCCACCTATGTTTTTG--TTGTCT-CT-AGCAAC----TTTGTTTATTCTAT----ACCATAGCATCAAATTAA--------TTAATTAAA-ATT-G-----------CTAAGTACCAAGCCATC---AGTTACCCGGTA
droBia1 scf7180000302188:1772983-1773179 + A-TATTGCCACGAAGGAACTGGATCTCG---G----CAGAAGAGTGGTCTTACTGGTT-T----AATGATCT--TATGATTTCCATATGTTGCAG-C--GGGTCCAAAGTCCATGTGGGTATTTT--TCCTGT-TT-AGCAAC----TGAGC---------TAG----GTGT-C-----CTTATTTTTAGTTTAAGTAAGAGAA-AACTAT---ACCATTTTCTTCAAGTCTTT---AAGTGCCCTGTA
droTak1 scf7180000415705:519636-519833 + G-TATTGCCACGAAGGAACTGGATCTTCTTGTTGAGC-GGAGAGTGGTATTTCTGGTT-T----AATGATCTT-TATGA-TTCCATATGTTGCAG-C-CGGGTCCAAAGTCCATGTGAGTATTTT--TCCTGA-TT-AGGATC----GTTGT---------AAG----GTGT-C-----CAAA------GCTTAATTTTTAGAG-AACTAT---ACTAGTTTCTTTTACTCTGT---TATAGCCCTGTA
droEle1 scf7180000491273:407187-407382 - ----TTGCCACGAAGGAACTGGAACTTGTTGTTG------TGAGTAGTTTTACTGGTT-TAACTAAAGATCTCTTTTGAATTTCATCTGTTGCTTGCGAGGGTTCAAAGTCCATGTATGTTTGGTTTTCC--C-TT-AAAAAC----CTTTAA--TTTAAA----TTTGTTTCC-----CTAA-------TTTAATTGAAGGACAAAGTAT---ACATTTATCTTTAAGTCT-------------TTTA
droRho1 scf7180000766156:53558-53760 - A-TATTGACGCGGAGGAACTGGAACTTCTTGTTG------TGAGCAGTATTACTGGTT-TAATTAAAGATCTC-TTTGAATTCCATCTGTTGCTT-G-AGGGTTCAAAGTCCATGTGT-TGTATT--TC-TCT--TAAGAAAA----TGTGTA--ATCAAC----TCTGTATCGTCTACTTAA--------TTGATTAA----C-AAATAA---ACAATTATCATTAAGTCTTT---TATTTCCGTGAA
droFic1 scf7180000453924:721197-721402 + TGTGTTGCCACGAAGGAACTGGATCTTCTTCTTG------TCTGCCGTACTACTGGTTTTTATTAATGATCTC-TTTGAATTCCGGCTGTTGCTG-C-AGGGTCCAAAGTCCGTTTATGTATAAC--TTCTATTTT-AGGAAC----ATTGTT--TTTAAA-TGATCCATATCC-----TTAA--------TTAAACTGA-G------TATGA-TTATTCAGCTTAAAGTCGTA---GTTTGCCCTGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T-TATTGCCACGGAGCAACTTGATCTTCCGAT----CAGAAGAGCAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCAGC--TCCTTCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------ACACTTT-TGCATTTCCCTGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................CT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----......................................................................21115.0015131000100000000000
....................................................................................................................................CT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----T.....................................................................22113.0013121000000000000000
.......................................................................................................................................AA-----TTGGA----TT--TTCA-CTGGC--------C-----CT....................................................................21110.001082000000000000000
.....................................................................................................................................T-AA-----TTGGA----TT--TTCA-CTGGC--------C-----C.....................................................................2117.00752000000000000000
................................................TTTTCTGGTT-T----GAAGATCTC-T..............................................................................................................................................................................2116.00651000000000000000
...................................................................................................................................................................................................TTAAA-GCG-ATCTATGGCACTA...............................2115.00550000000000000000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGCAC.................................2113.00321000000000000000
..........................................................................................................................................................................................................CG-ATCTATGGCACTAA--------ACACT.................2113.00300002000000001000
.......................................................GTT-T----GAAGATCTC-TATGATTT.......................................................................................................................................................................2113.00320000000001000000
....................................................................................................................................................................................................TAAA-GCG-ATCTATGGCACTAA--------......................2113.00310000200000000000
.........................TTCCGAT----CAGAAGAGCAGTTT.......................................................................................................................................................................................................2113.00300000000000003000
.......CCACGGAGCAACTTGATCTTC.............................................................................................................................................................................................................................2113.00320010000000000000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGCACT................................2212.00220000000000000000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTA...............................1912.00202000000000000000
........................................................................C-TATGATTTCCATATGTTGC............................................................................................................................................................2012.00200010100000000000
................................................................................................................................................................................................TAATTAAA-GCG-ATCTATGGCA..................................2112.00220000000000000000
..........................................................................................................AAGTCCACCTATGTGCAGC--TC........................................................................................................................2112.00220000000000000000
.............................................AGTTTTTCTGGTT-T----GAAGATC..................................................................................................................................................................................2111.00100010000000000000
...........................CCGAT----CAGAAGAGCAGTTTTTC....................................................................................................................................................................................................2211.00100000100000000000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGCACC................................2211.00110000000000000000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTAT--------......................2011.00100000000000001000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGC...................................1911.00101000000000000000
..............................................................................................................................................TTGGA----TT--TTCA-CTGGC--------C-----CT....................................................................1911.00101000000000000000
......................ATCTTCCGAT----CAGAAGAGCA...........................................................................................................................................................................................................2011.00100010000000000000
................................................................................................................................CCTTCT-AA-----TTGGA----TT--TTCA-CTG......................................................................................2211.00100000100000000000
....................................................................................................................................................................................................TAAA-GCG-ATCTATGGCACTA...............................2011.00110000000000000000
.....................................AGAAGAGCAGTTTTTCTGGTT-T----.........................................................................................................................................................................................2211.00110000000000000000
......................................................................................................................................................................................................AA-GCG-ATCTATGGCACTAA--------AC....................2111.00100000100000000000
.....................................AGAAGAGCAGTTTTTCTGGTT-..............................................................................................................................................................................................2111.00100000000001000000
.........................TTCCGAT----CAGAAGAGCAGTTTT......................................................................................................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTAA--------AC....................2211.00100000100000000000
..................................................................................................................................................................................................ATTAAA-GCG-ATCTATGGCACT................................2111.00110000000000000000
.......................................................................................................................................................................................................................CTAA--------ACACTTT-TGCATTTCCC....2111.00100000001000000000
................................................................................................C-AGGGTTCAAAGTCCACCTAT...................................................................................................................................2111.00100000100000000000
......................................................................................................................................................................................................AA-GCG-ATCTATGGCACTA...............................1811.00110000000000000000
.....................................................TGGTT-T----GAAGATCTC-TATGATT........................................................................................................................................................................2211.00100000010000000000
........................................................................................................................................A-----TTGGA----TT--TTCA-CTGGC--------C-----CTA...................................................................2111.00100000100000000000
.....................................................................TCTC-TATGATTTCCATATGTTGC............................................................................................................................................................2311.00100000100000000000
....................................................................................ATATGTTGCAG-C-AGGGTT.................................................................................................................................................1811.00100001000000000000
...................................................................................................................................TCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----......................................................................2211.00110000000000000000
....................................................................................................................................CT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----C.....................................................................2211.00110000000000000000
......................................................GGTT-T----GAAGATCTC-TATGATTT.......................................................................................................................................................................2211.00101000000000000000
..........................................................................................................................................................................................................................A--------ACACTTT-TGCATTTCCCTGT.2111.00100000100000000000
...................................................................................CATATGTTGCAG-C-AGGGTTCA...............................................................................................................................................2111.00100000100000000000
...................................................................................................................................................................GC--------C-----CTAA--------TTAATTAAA-GCG-ATCT........................................2311.00101000000000000000
......................................................................CTC-TATGATTTCCATATGTTG.............................................................................................................................................................2111.00100000100000000000
..................................................................................................................................TTCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----......................................................................2311.00110000000000000000
...................................................................................................................TATGTGCAGC--TCCTTCT-A.................................................................................................................1811.00100000100000000000
..........................TCCGAT----CAGAAGAGCAGTTT.......................................................................................................................................................................................................2011.00100000000000001000
..............................................................................ATTTCCATATGTTGCAG-C-AGG....................................................................................................................................................2111.00100000000100000000
.....................................AGAAGAGCAGTTTTTCTG..................................................................................................................................................................................................1811.00100001000000000000
.................................................TTTCTGGTT-T----GAAGATCTC-TA.............................................................................................................................................................................2111.00100000010000000000
........CACGGAGCAACTTGATCTTC.............................................................................................................................................................................................................................2011.00110000000000000000
..........................TCCGAT----CAGAAGAGCAGTT........................................................................................................................................................................................................1911.00100010000000000000
....................................................................................................................................................................................TAA--------TTAATTAAA-GCG-ATCTATGG....................................2311.00100000010000000000
........................................................TT-T----GAAGATCTC-TATGATT........................................................................................................................................................................1911.00100000100000000000
.......................................AAGAGCAGTTTTTCTGGTT-T----G........................................................................................................................................................................................2111.00100010000000000000
................AACTTGATCTTCCGAT----CAGAA................................................................................................................................................................................................................2111.00100000100000000000
.....................................................TGGTT-T----GAAGATCTC-TATGAT.........................................................................................................................................................................2111.00100010000000000000
...........................................................T----GAAGATCTC-TATGATTTCCA....................................................................................................................................................................2111.00100001000000000000
.............................................................................................................TCCACCTATGTGCAGC--TCCTTC....................................................................................................................2211.00100000100000000000
..........................................................................................................AAGTCCACCTATGTGCAGC--..........................................................................................................................1911.00100000100000000000
...............................................................................................................................................................................................TTAATTAAA-GCG-ATCTATGGC...................................2111.00110000000000000000
.........................TTCCGAT----CAGAAGAGCAGTT........................................................................................................................................................................................................2011.00100000000000001000
........................................................................................................................................A-----TTGGA----TT--TTCA-CTGGC--------C-----T.....................................................................1911.00110000000000000000
.....................................................TGGTT-T----GAAGATCTC-TATGA..........................................................................................................................................................................2011.00100001000000000000
...............................................................................................................................................TGGA----TT--TTCA-CTGGC--------C-----CTAA--------TT........................................................2211.00100001000000000000
T-TATTGCCACGGAGCAACTTG...................................................................................................................................................................................................................................2111.00100010000000000000
......................................................................CTC-TATGATTTCCATATGTTGC............................................................................................................................................................2211.00100000100000000000
..................................................................................................................................................................................................................TGGCACTAA--------ACACTTT-TGCAT.........2111.00100001000000000000
droSec2
T-TATTGCCACGGAGCAACTTGATCTTCCGAT----C-GAAGAGCAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCACC--TCCTTCT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------TCACTTT-TGCATTTCCCTGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................AGCAGTTTTTCTGGTT-T----GAAG.....................................................................................................................................................................................2114.0040103
...................................................TCTGGTT-T----GAAGATCTC-TATG...........................................................................................................................................................................2111.0011000
...........................................................................................GCAG-C-AGGGTTCAAAGTCCAC.......................................................................................................................................2111.0010001
.......................................................................................................TCAAAGTCCACCTATGTGCAC.............................................................................................................................2111.0011000
................................................................................................................................CCTTCT-AA-----TTGGA----TT--TTCA-CT.......................................................................................2111.0011000
.............................................AGTTTTTCTGGTT-T----GAAGATC..................................................................................................................................................................................2111.0010100
.......................................................GTT-T----GAAGATCTC-TATGATTT.......................................................................................................................................................................2111.0010100
................AACTTGATCTTCCGAT----C-GAAG...............................................................................................................................................................................................................2111.0010100
....................................................................................ATATGTTGCAG-C-AGGGTTCA...............................................................................................................................................2011.0010001
.....................................................................TCTC-TATGATTTCCATATGTT..............................................................................................................................................................2111.0011000
.......................................................................................TGTTGCAG-C-AGGGTTCAAAG............................................................................................................................................2011.0010100
..........................................................................................................................ACC--TCCTTCT-AA-----TTGGA----TT--TT............................................................................................2111.0011000
.....................................................TGGTT-T----GAAGATCTC-TATGAT.........................................................................................................................................................................2111.0010001
......................................GAAGAGCAGTTTTTCTGGTT-T----.........................................................................................................................................................................................2111.0011000
............................................CAGTTTTTCTGGTT-T----GAAGAT...................................................................................................................................................................................2111.0010001
..............................................................................ATTTCCATATGTTGCAG-C-AGG....................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTA...............................1911.0010010
...............................................................................TTTCCATATGTTGCAG-C-AGGG...................................................................................................................................................2111.0010100
.........................................................................................................AAAGTCCACCTATGTGCACC--T.........................................................................................................................2111.0011000
....................................................................................................................................CT-AA-----TTGGA----TT--TTCA-CTGGC--------C-----......................................................................2111.0011000
..........................................................................TATGATTTCCATATGTTGCAG-.........................................................................................................................................................2111.0010001
...........................................................................ATGATTTCCATATGTTGCAG-C-.......................................................................................................................................................2111.0010001
dm3
A-TATTGCCACGGAGCAACTTGATCTTGCGAT----CAAAAGAGTAGTTTTTCTGGTT-T----GAAGATCTC-TATGATTTCCATATGTTGCAG-C-AGGGTTCAAAGTCCACCTATGTGCACC--TCCTTTG-AA-----TTGAA----TT--TTCA-CTAGCCCTACAGCC-----CTAA--------TTAATTAAA-GCG-ATCTATGGCACTAA--------ATACTTT-TGCATTTCCCTGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................GTAGTTTTTCTGGTT-T----GAAGA....................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000011210000000000000000000000000000000301100000000
.......................................................GTT-T----GAAGATCTC-TATGATTT.......................................................................................................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020140000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000002010000000000000000000000000000000000000000000
.......CCACGGAGCAACTTGATCTTG.............................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000500010001000
...............................................................................TTTCCATATGTTGCAG-C-AGGG...................................................................................................................................................2119.0090000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001001011000000000000000000000000000000000000000000000011000000000000000000000010000000000000000000000000000
......................................................................................ATGTTGCAG-C-AGGGTTCAAAG............................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001010000000000000000000000000000001100101000000
................................................................................................................................................................................................................TATGGCACTAA--------ATACTTT-TGC...........2117.0070000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................TTTTCTGGTT-T----GAAGATCTC-T..............................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTGCAG-C-AGGGTTCAAAGT...........................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000200001000000
...............................................................................................................................................................................................................CTATGGCACTAA--------ATACTTT-TG............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........CGGAGCAACTTGATCTTGCGA..........................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................C-TATGATTTCCATATGTTGCA...........................................................................................................................................................2114.0040000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TAAA-GCG-ATCTATGGCACTAA--------......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000110010000000
..............................................................................ATTTCCATATGTTGCAG-C-AGG....................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGCAC.................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000
................................................................................TTCCATATGTTGCAG-C-AGGGT..................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010010000000000000000000000000000010000000000
........CACGGAGCAACTTGATCTTGC............................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000010000000000
.....................................................................................................................................................................................AA--------TTAATTAAA-GCG-ATCTATG.....................................2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................AA-----TTGAA----TT--TTCA-CTAGCCCT.................................................................................2113.0030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................GGTT-T----GAAGATCTC-TATGATT........................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTAGTTTTTCTGGTT-T----GAAG.....................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000100000000000
....................................................CTGGTT-T----GAAGATCTC-TATGA..........................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AT----CAAAAGAGTAGTTTTTCTG..................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000100000000000
......................................................................................................TTCAAAGTCCACCTATGTGCA..............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................................................................TC-TATGATTTCCATATGTTGC............................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTAA--------A.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................................................TTCTGGTT-T----GAAGATCTC-TAT............................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................GTTCAAAGTCCACCTATGTGC...............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCGAT----CAAAAGAGTAGTTTT......................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................AGTAGTTTTTCTGGTT-T----GAAG.....................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000
.............................................AGTTTTTCTGGTT-T----GAAGATC..................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000
......................................................................................................................................................................................A--------TTAATTAAA-GCG-ATCTATGG....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AA-GCG-ATCTATGGCACTAA--------AT....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAATTAAA-GCG-ATCTATGGCA..................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000
..........................................................................................TGCAG-C-AGGGTTCAAAGTCCA........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000
...............................T----CAAAAGAGTAGTTTTTCTGG.................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................TAGTTTTTCTGGTT-T----GAAGAT...................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000
............................................................................................................................................................TCA-CTAGCCCTACAGCC-----CTAA--------T.........................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGGTT-T----GAAGATCTC-TATGAT.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
............GAGCAACTTGATCTTGCGAT----C....................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................GCACC--TCCTTTG-AA-----TTGAA----TT--..............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................G-C-AGGGTTCAAAGTCCACCTA....................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
A-TATTGCCACGGAGCAACTTG...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................CCTATGTGCACC--TCCTTTG-A.................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATGTTGCAG-C-AGGGTTCAAAGTCCACCTA....................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................TGATTTCCATATGTTGCAG-C-AG.....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TATGTGCACC--TCCTTTG-AA-----TT.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TTG-AA-----TTGAA----TT--TTCA-CTAGC....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACTAA--------ATACTTT-TGCATTT.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TCA-CTAGCCCTACAGCC-----CTAA--------..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGAGCAACTTGATCTTGCGAT----.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGTTGCAG-C-AGGGTTCAAAGTA..........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ATTAAA-GCG-ATCTATGGCACTA...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................CTC-TATGATTTCCATATGTTG.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCAAAGTCCACCTATGTGCAC.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTAGTTTTTCTGGTT-T----GAAGG....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................AATTAAA-GCG-ATCTATGGCACT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................ATGTGCACC--TCCTTTG-AA-----TTG........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................A-----TTGAA----TT--TTCA-CTAGCCCTA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCAACTTGATCTTGCGAT----CAATC................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAA-GCG-ATCTATGGCACTAA--------......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................TT-T----GAAGATCTC-TATGATTT.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
......GCCACGGAGCAACTTGATCTT..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCCATATGTTGCAG-C-AGGGTTC................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................GCGAT----CAAAAGAGTAGTTTTT.....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGTTTTTCTGGTT-T----GAAGAT...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................ATCTC-TATGATTTCCATATGT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAGCAACTTGATCTTGCGAT----CA...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................C--TCCTTTG-AA-----TTGAA----TT--TT............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTAGTTTTTCTGGTT-T----GT.......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTAATTAAA-GCG-ATCTATGGC...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................TAAA-GCG-ATCTATGGCACTA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......CCACGGAGCAACTTGATCTTC.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................CAAAGTCCACCTATGTGCACC--..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAAGTCCACCTATGTGCACC--T.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCTTGCGAT----CAAAAGAGTAG..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................TTCTGGTT-T----GAAGATCTC-TA.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................TAATTAAA-GCG-ATCTATGGCAC.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................ATTAAA-GCG-ATCTATGGCACT................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................CTAA--------TTAATTAAA-GCG-ATC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AAGATCTC-TATGATTTCCATA..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCACGGAGCAACTTGATCTTGC............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................ATATGTTGCAG-C-AGGGTTC................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.......................................AAGAGTAGTTTTTCTGGTT-T----G........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........ACGGAGCAACTTGATCTTT.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................TGGTT-T----GAAGATCTC-TATGATA........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................TATGATTTCCATATGTTGCAG-.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AA--------ATACTTT-TGCATTTCCCT...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACGGAGCAACTTGATCTTG.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................TTCTGGTT-T----GAAGATCTC-TATG...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........ACGGAGCAACTTGATCTTGCG...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TACTTT-TGCATTTCCCTGTA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATGTTGCAG-C-AGGGTTCAGG.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................TATGTTGCAG-C-AGGGTTCAA..............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................T----GAAGATCTC-TATGATTTCC.....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................C-TATGATTTCCATATGTTGC............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATCTATGGCACTAA--------ATACTTT-..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCCATATGTTGCAG-C-AGGGTT.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...ATTGCCACGGAGCAACTTGAT.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGAT----CAAAAGAGTAGTTTTTC....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................TTAAA-GCG-ATCTATGGCACT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CTACAGCC-----CTAA--------TTAATTAAA-................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TATGTTGCAG-C-AGGGTTCAAA.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................C--TCCTTTG-AA-----TTGAA----TT--TTA...........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCAAAGTCCACCTATGTGCACC--..........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGATCTTGCGAT----CAAAAGAG.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TAA--------ATACTTT-TGCATTTCCCT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GTTTTTCTGGTT-T----GAAGATCT.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................A--------ATACTTT-TGCATTTCCCTGT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTGCCACGGAGCAACTTGATC................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................TCCACCTATGTGCACC--TCCTT.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGAT----CAAAAGAGTAGTTTTTCT...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................CAG-C-AGGGTTCAAAGTCCAC.......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................TTGCAG-C-AGGGTTCAAAGTCCA........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................TCTGGTT-T----GAAGATCTC-TAT............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGCACC--TCCTTTG-AA-----TTGAA----T.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................GCACC--TCCTTTG-AA-----TTGAA----TT--TTC...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T-TATTGCCACGGAGGAACTTGATCTTCGTGT----CAGCAGAGCAGTTTTACTGGTT-T----GAAGATCTT-TATGATTTCCATATACTGCAG-C-AGGGTTCAAAGTCCGTCTATGTGCACC--TAAGCTT-TT-----TGCGG----TT--TTTA-CTGGCCCTACAGCC-----CTAA--------TTAATTAAA-GTT-ATCTATGGTACTAA--------AGTCTTC-TGTATTTCCCTGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................CATATACTGCAG-C-AGGGTTCA...............................................................................................................................................2111.0010000100
droYak3
T-TTTTGCCACGGAGGAACTTGATCTTCGAGT----CAGCAGAGCAGTTTTACTGGTT-T----AAAGATCTT-TATGATTTCCATATGTTGCAG-C-AGGGTCCAAAGTCCGCCTATGTGCACC--TGCGTCT-TA-----TGCGG----TT--TTTA-CTGGCCCTACAGCC-----CTAA--------TTAATTAAA-GTG-ATTTATGGCACTAA--------AGTCTTTCTGTATTGCCCTGT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................AGCAGAGCAGTTTTACTGGTT-T----.........................................................................................................................................................................................2212.00202000000000
........................................................TT-T----AAAGATCTT-TATGATTT.......................................................................................................................................................................2011.00101000000000
.........................TTCGAGT----CAGCAGAGCAGTTT.......................................................................................................................................................................................................2111.00101000000000
....................................................................................................................................CT-TA-----TGCGG----TT--TTTA-CTGGCC...................................................................................2111.00101000000000
.........................................................................................................AAAGTCCGCCTATGTGCACC--T.........................................................................................................................2111.00100100000000
...........................CGAGT----CAGCAGAGCAGTTTTA.....................................................................................................................................................................................................2111.00101000000000
....................................................................................................................ATGTGCACC--TGCGTCT-TA-----TGC........................................................................................................2111.00101000000000
droEug1
A-TATTGCCACGAAGGAACTTGATCTTG---T----CAGCAGAGCAGTATTACTGGTT-T----GATGATCTT-TATGATTTCCATATGTTGCAT-C-GGGGTTCAAAGTCCACCTATGTTTTTG--TTGTCT-CT-AGCAAC----TTTGTTTATTCTAT----ACCATAGCATCAAATTAA--------TTAATTAAA-ATT-G-----------CTAAGTACCAAGCCATC---AGTTACCCGGTASizeHit CountTotal NormTotal
No Reads
droBia1
A-TATTGCCACGAAGGAACTGGATCTCG---G----CAGAAGAGTGGTCTTACTGGTT-T----AATGATCT--TATGATTTCCATATGTTGCAG-C--GGGTCCAAAGTCCATGTGGGTATTTT--TCCTGT-TT-AGCAAC----TGAGC---------TAG----GTGT-C-----CTTATTTTTAGTTTAAGTAAGAGAA-AACTAT---ACCATTTTCTTCAAGTCTTT---AAGTGCCCTGTASizeHit CountTotal NormTotal
No Reads
droTak1
G-TATTGCCACGAAGGAACTGGATCTTCTTGTTGAGC-GGAGAGTGGTATTTCTGGTT-T----AATGATCTT-TATGA-TTCCATATGTTGCAG-C-CGGGTCCAAAGTCCATGTGAGTATTTT--TCCTGA-TT-AGGATC----GTTGT---------AAG----GTGT-C-----CAAA------GCTTAATTTTTAGAG-AACTAT---ACTAGTTTCTTTTACTCTGT---TATAGCCCTGTASizeHit CountTotal NormTotal
No Reads
droEle1
----TTGCCACGAAGGAACTGGAACTTGTTGTTG------TGAGTAGTTTTACTGGTT-TAACTAAAGATCTCTTTTGAATTTCATCTGTTGCTTGCGAGGGTTCAAAGTCCATGTATGTTTGGTTTTCC--C-TT-AAAAAC----CTTTAA--TTTAAA----TTTGTTTCC-----CTAA-------TTTAATTGAAGGACAAAGTAT---ACATTTATCTTTAAGTCT-------------TTTASizeHit CountTotal NormTotal
No Reads
droRho1
A-TATTGACGCGGAGGAACTGGAACTTCTTGTTG------TGAGCAGTATTACTGGTT-TAATTAAAGATCTC-TTTGAATTCCATCTGTTGCTT-G-AGGGTTCAAAGTCCATGTGT-TGTATT--TC-TCT--TAAGAAAA----TGTGTA--ATCAAC----TCTGTATCGTCTACTTAA--------TTGATTAA----C-AAATAA---ACAATTATCATTAAGTCTTT---TATTTCCGTGAASizeHit CountTotal NormTotal
No Reads
droFic1
TGTGTTGCCACGAAGGAACTGGATCTTCTTCTTG------TCTGCCGTACTACTGGTTTTTATTAATGATCTC-TTTGAATTCCGGCTGTTGCTG-C-AGGGTCCAAAGTCCGTTTATGTATAAC--TTCTATTTT-AGGAAC----ATTGTT--TTTAAA-TGATCCATATCC-----TTAA--------TTAAACTGA-G------TATGA-TTATTCAGCTTAAAGTCGTA---GTTTGCCCTGTASizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:46 PM