ID:

dsi_7396

 Coordinate:

2l:1075984-1076133 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -19.8 -19.7

Flybase annnotation

exon [2l_1076134_1076278_-]; five_prime_UTR [2l_1076134_1076278_-]; intron [2l_1075655_1076133_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGGATACTTAACGTTAAGCTGGTCGACTGAGCGTGCGGCAAGTATAAAGGTGAGTGAGTTTAAAGGCCAGCACAGGTAACACAGATTGTAAGCCTTCACCATGCAAACACACATGTATGGGGGCCAAACAAAATTTGCAAAGCCAAATGCAAATGCAATAATAGCAACAAACACACGAAGCGAATGCAATTGCTCACTCATGCATGCAAACACACACTCACACACATGTAGCCTTCACCCAAATAAAAT
*********************************************************************************.....((((..((((...(((((((........)))))))))))...)))).(((((((........)))))))............*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 O001
Testis
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
..............TCAAGCTGGTCGACTGAGCGT....................................................................................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.................................................................................................................................................................................................................AACACACACTCACACACATGT.................... 21 0 1 2.00 2 0 0 2 0 0 0
...............CAAGCTGGTCGACTGAGCGTG...................................................................................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.................................................................................ACAGATTGTAAGCCTTCACCA.................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.............................................................................TAACACAGATTGTAAGCCTTC........................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................ATGCAAATGCAATAATAGCA................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................................ACACTCACACACATGTAGCCT............... 21 0 1 1.00 1 0 0 0 1 0 0
................AAGCTGGTCGACTGAGCGTGC..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0
.......................TCGACTGAGCGTGCGGCAAGT.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
................AAGCTGGTCGACTGAGCGTGT..................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................CAGGTAACACAGATTGTAAGCC........................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0
.........TAACTTCAAGCTGGTCGACTGAG.......................................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
....................TGGTCGACTGAGCGTGCGTT.................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0
..............TCAAGCTGGTCGACTGAGCG........................................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.......................TCGACTGAGCGTGCGGCAAGTATAAA......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1
.....................GGTCGACTGAGCGTGCGGCAG................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................ACAGATTGTAAGCCTTCACCG.................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
............CGTTAAGCTGGTCGACTGAGC......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
....ATACTTAACTTTAAGCTGGTCG................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1
............................................GTAAAGGGCAGTGAGTTTAA.......................................................................................................................................................................................... 20 3 11 0.18 2 2 0 0 0 0 0
.............................................TAAAGGGCAGTGAGATTAAA......................................................................................................................................................................................... 20 3 13 0.15 2 2 0 0 0 0 0
.............................................TGAAGGGCAGTGAGTTTAAA......................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0
.............................................TAAAGGGCAGTGAGATTAA.......................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

AACCTATGAATTGCAATTCGACCAGCTGACTCGCACGCCGTTCATATTTCCACTCACTCAAATTTCCGGTCGTGTCCATTGTGTCTAACATTCGGAAGTGGTACGTTTGTGTGTACATACCCCCGGTTTGTTTTAAACGTTTCGGTTTACGTTTACGTTATTATCGTTGTTTGTGTGCTTCGCTTACGTTAACGAGTGAGTACGTACGTTTGTGTGTGAGTGTGTGTACATCGGAAGTGGGTTTATTTTA
***********************************************************************************.....((((..((((...(((((((........)))))))))))...)))).(((((((........)))))))............********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 M053
female body
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
................................................................TCCGGTCGTGTCCATTGTGTC..................................................................................................................................................................... 21 0 1 5.00 5 4 1 0 0 0 0 0 0
.............................................ATTTCCACTCACTCAAATTTC........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................TCCGGTCGTGTCCATTGTGTCT.................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...................GACCAGCTGACTCGCACGCCG.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................CGTTAACGAGTGAGTACGTACGTTTG...................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................AACGAGTGAGTACGTACGTTT....................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
...........................................................................CCATTGTGTCTAACATTC............................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................TGCTTCGCTTACGTTAAC......................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................GGAAGTCGTACGTTTCTGT.......................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................TCTATACATCGGAAGTAGGTT....... 21 3 2 0.50 1 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................TTTGTGTGTGAGTGTGTGTA...................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................CGGTTTACGTTAACGTCAGTAT...................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................................TCGGAAGCGGGCTTATTTTT 20 3 15 0.13 2 0 0 0 0 0 0 0 2
......................................................................................................................................................................................................................................TCGGAAGCGGGCTTATT... 17 2 10 0.10 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:1075934-1076183 - dsi_7396 TTGGATACTTAACGTTAAGCTGGTCGAC--------TGA--GCGT-GCGG---CA-AGTATAAAGGTGAGTGAGTTT-AAAG----------G---------------CCAGCACAGGTAACACAGATTGTAAGCCTTCACCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAGCCAAATGCAAATGCAATAATAG---CAACA---AACACACG----------------------AA-GCGAATGCAATTGC-T--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------
droSec2 scaffold_14:1081697-1081946 - TTGGATACTTAACTTTAAGCTGGTCGAC--------GGA--GAGT-GCGG---CA-AGTATAAAGGTGAGTGAGTTT-AAAG----------G---------------CCAGCACAGGTAACACAGGTTTTAAGCCTTTACCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAGCCTAATGCAAATGCAATAATAG---CAACA---AACACACG----------------------AA-GCGAATGCAATTGC-C--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------
dm3 chr2L:1128617-1128853 - TTGGATACTTAACTTCAAGCTGGTCGAC--------TGA--GCGT-GCTG---CT-AGTATAAAGGTGAGTGAGCTT-AGAG----------G---------------CCAGCACACGTAACACAGATTTTAGGCATTT-CCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GAGACCAAACAAAATTTGCAAAA------------GCAATAACAG---CAACA---AATACACG----------------------AA-GCGAATGCAATTGC-T--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------
droEre2 scaffold_4929:1172831-1173065 - TTGGATATTTAACTTTAAGCTGGTCGAC--------TGA--ACGT-GCTG---CA-AGCAAAAAGGTGAGTGAATTT-ACTG----------G---------------CCAACAGAAGTAGCACGGATTTCAGGTATTT-CCA-----TACA--AA--CACACATGCA-------------T-----------------------------GGGGCCAAACAAAATTTGCAA-G------GCAAATGCAATAACAG---CAACA---AACACAAG----------------------CA-GCGAATGCAATTGC-A--CAC--TCA------------------T----GCAT--A----------------CAAATACACA------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------
droYak3 2L:1106399-1106635 - TTGGATATTTAACTGTAAGCTGGTCGAC--------TGA--ACGT-ACTG---CA-AGCATAAAGGTGAGTGAATTT-ATTG----------G---------------CCAATACAGGTAGCACTGTATTCAGGTATTT-TTA-----TCCA--AA--CACACATGCA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAG------GTAAATGCAATAACAG---CAACA---AACACATG----------------------AA-GCGAATGCAATTGC-A--TAC--GCA------------------T----GCAT--A----------------CAAATACACA------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------
droEug1 scf7180000409005:81312-81547 + TTGTTATCAAAACTTTGTGCTGGTTAAC--------CAA--CGTA-GCTG--GCT-TTAATAAAGGTGAGTTAAACGAATTT----------T---------------TTTTTCGTGGCAATACAGACTTGAGGTATTT-TCA-----TACA--AA--CACACATGCAC------------AG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCATTGACAATAACAA---AAATA---ACAACATT----------------------TA-GCTAATGCAATTTC-A--CAC--ACA------------------T----GCAT--A----------------TATATACC------------------C----AC-ACA-GCCTTCACCCAAATAAAAT-------
droBia1 scf7180000302188:733446-733694 + TTGGAGAACAAACACTTTGCTGGCTAAC--------CTA--AGGT-GCTC--TCA-GCAACAAAGGTAAGTCAAACGTAGTG----------G---------------GTAATACAGGCGAAACTGATTTGAGGTCTTT-TCA-----AACA--AA--CACACATGCAC------------TG----------------------------GGGGCCAAACAAAATTTGCAAAG------CCAAAGGCAATGACAA---CAATA---ACAACATT----------------------GG-GCCAGTGCAAT-GC-A--CAC--ACG------------------C----CTATACA--TATACCTATGTA--CAGATG----------------CA--C----AT-ACA-GCCTTCACCCAAATAAAAT-------
droTak1 scf7180000415264:249809-250052 + TTGGAGAATCAACTTTTTGCTGGTCAAC--------TGA--AGGT-GCTG--GCACTCTATAAAGGTGAGCTAAATC-AATG----------G---------------GTAATACAGGTAAATCCGATTTGAGGTCTTT-TCA-----TACA--AA--CACACATGCAA------------AC----------------------------GGGGCCAAACAAAATTTGCAAAG------GCAAAGGCAATAACAA---AAATA---ACAACATT----------------------AG-GCGAATGCATTTGT-A--TAT--ATG------------------T----ATAT--A----------------CAATTACACATACG--------TA--C----AT-AAA-GCCTTCACCTAAATAAAAT-------
droEle1 scf7180000491273:2357459-2357718 + TTGGCAATTTACGTTTATGCTGGTTAAC--------TGAG-GTGTGGGTG--GAT-TATTCAAAAGTGAGTAAAACT-ATTG---------TG---------------ATAATACAGGTAACGCCGACGTGAGATCTTTTCGA-----TGCACAAACACACACATGCAC----------TTTG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAAGCAATAACAA---AAGTA---ACAACATT----------------------AA-GCGAATGCAATTGCCA--CAC--TCA------------------T----ATGT--A----------------CAAATGCATATT-G--------TA--T----AT-ATA-GCCTTCACCCAAATAAAATGCATCTT
droRho1 scf7180000765772:9204-9440 + TTGGCAATATACATTTGTGCTGGTCAAC--------TGA--GGGT-GCTG--GAT-TAGTTAAAAGTGAGTAAAACT-GGTG---------GG---------------GTAATACAGGTAATATCCATTAGATATCTTT-TCA-----AACA--AA--CACACATGCAC----------T-TG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAGGCAATAACAA---AAATA---ACAACATT----------------------AA-GCGAATGCAGTTGC-A--CAT--TCT------------------C----ATAT--A----------------CAAATGCA------------------C----AA-ATA-GCCTTCACCCAAATAAAAT-------
droFic1 scf7180000454155:342806-343044 - TTGGAAAATAGACTTTGTGCTGGATAAC--------TAA--GGGT-GTTG--GCA-TTCAAAAAGGTGAGTTGAGCAGAAGG----------G---------------AAAATACAAGTAATACTTATTTAAGGTATTTTCTA-----TACA--AA--CACATATGCAG------------TG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAGGCAATGACAA---AAATA---ACAACATC----------------------AG-CGCAATGCAATTGC-A--CAC--CCA------------------T----ATAT--A----------------CAAATGTAC--------------A--A----AT-ACA-GCCTTCACCCAAATAAAAT-------
droKik1 scf7180000302405:356304-356541 - TTGGCAATTGAACTTTGTGCGAGCTGCC------CCCGA--GTGT-GCTG--GCC-TAAATAAAGGTGAGTGGAAGA-GCTGGTT------GAGTTGCATTCTAATGGAAAAC----------------------------GC-----CACA--AA--TACACTTGCAC------------CC----------------------------AGGGCCAAACAAAATTTGCAAAG------GCAAA-------ACAA---C---A---ACAACGTCGGGGTTTTAG----------TTAAGCGAAATGCAATTGC-T--CAC--ACA------------------A----ACAC--A----------------CACTCGCAGACA----------CA--C----GG-ACA-GCCTTCACCTAAATAAAAT-------
droAna3 scaffold_12916:4595526-4595743 - TTGCAA-TAGACCCGTGTTCGAGTGTCC------TTCGA--GTG--GCTG--GCA-CCAATAAAAGTAAGTGAAAAC-CGTGCC-AACCGT--GCTGG---------------------------------------TT-TCC-----AA----------------------------------------------------------------CCCATCCACAAATCGCATTG------GCAAAAACAAAAATAGAAGCAACA---ACAACCTC----------------------AA-CGGAATGCAACTGC-A--CAC--GCACA----------------C----CAACACA--------ACGACG--ACGGTGGGCAGG----------CA--G----AG-GCAGGCCTTCACCCAAATAAATT-------
droBip1 scf7180000396737:192122-192340 + TTGCA-ATCAAACTGTGTACGAGTTTCC------TCCGA--GTG--GCTG--GCA-GCAACAAAAGTAAGTGAAAAC-CGTG----------G---------------CACATG---------CTAA----------TT-TC------CGCC--AA--------TCCAT------------AC----------------------------GGGGCCAAACACAATTTGCAC-G------GCAAAAACAAAAATAGAAACAACA---ACAACCCT----------------------AA-CGGAATGCAACTGC-A--CAC--GCACA----------------C----CAAT------------------------GCCAT----CAAATCTCTG--T----GG-GCA-GCCTTCACCCAAATAAATT-------
dp5 4_group3:9577063-9577287 - TTGGATACTCC-------------------------CG--CGC--TGCTGTTGCA-TTAGAGAACGTAAGTTGAGGG-CATGCT-TAATGC--GATGA--------------------------------TTGGCCTAT-TCG-----CGCA--AAAACGCACGCACA-------------CAAGGACCAGAGGCGAGAGCACA--------------CACGGATAGC------------------GCCAAACCAA---AACCA---AACACACA----------------------GA-GA----GCACCCAC-GCACAC--ACA------------------C----ACACACA----------------CACACACACACACACA------TACACTTTAAT-GCA-GCCTTCACCTAAATAA----------
droPer2 scaffold_8:764402-764623 - TTGGATACTCC-------------------------CG--CGC--TGCTGTTGCA-TTAGAGAACGTAAGTTGAGGG-CATGCT-TAATGC--GATGA--------------------------------TTGGCCTAT-TCC-----CGCA--AAAACGCACGCACA-------------CAAGGACCAGAGGCGAGAGCACA--------------CACGGAT------------------AGCGCCAAACCAA---AACCA---AACACACA----------------------GA-GA----GCACCCAC-G--CACACACA------------------C----ACACACA--------CACACA--CACATATACA----------------CGTTTATGGCA-GCCTTCACCTAAATAA----------
droWil2 scf2_1100000004902:2155903-2156011 - CCAACAACA---------------------------------------------------------------------ATTA----------G---------------AAAATGCAAATAAT-CAAATGTTAAATATTT-GCACCCAAGACA--AA--CACACACGCAC------------AC----------------------------A-------------------------------------------------------------------------------------------CATGCAAAC-------AC--ACA------------------T----G--------------GACACACA----------------------CA--C----AC-ACA-CACTT---------------------
droVir3 scaffold_12963:20158106-20158347 + CTAAGCATTAGAC--------AGTTGGT--------GCA--ACGT-GCGT---CA-AG---TAAGGTAAGTGGTT------G---------------------------------GGGT----------------AAGT-GCACCCGAGCAC--AC--GACACACACACGCACATGCACA-CGCACATG-------------CACACGCACACGGGCAAATACAGTTTGCAAAA------ACAAA-------ACAA---AAGCATTATT------TTTATTTTGTGCTTTTGCAACTAA-TG----GCACATAT-A--TGCGCATA------------------TTTATACAT--A----------------CGGCTGCACACA----------TT--G----AT-GCA-GCCTTCACCCAAATAA----------
droMoj3 scaffold_6473:32662-32776 - AAACAC---AAGCTGTGAAGC------TGCAACTTGCA--AGT--TGCAAC----------TAAATTAAATAA----------------------------------------------------------AGTTCATT-GCA-----TACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA------------------C----GCAC--ACACGTACACACTCACA----------------------CA--C----AT-GCA--CATATACACATACACAAT-------
droGri2 scaffold_15252:5545934-5546110 - A------------------------------------------------------------------------------------------------------------------------------------GC--TC-TCA-----CACA--CA--CACACACACA-------------CAAAGATG----------------------CAAGCCAAACAGAGC-TGTAAAA------ACAAA------AACAA---ATGCGTTATT------TT----TTGCATTGCTACAACAAA-TG----GCACACAC-A--TACACATATATGTATATATGTGAACAT----GTAT--ACAAA------------CAGATGCACACA----------TT--G----AT-GCA-GCCTTCACCTAAATAG----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGGATACTTAACGTTAAGCTGGTCGAC--------TGA--GCGT-GCGG---CA-AGTATAAAGGTGAGTGAGTTT-AAAG----------G---------------CCAGCACAGGTAACACAGATTGTAAGCCTTCACCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAGCCAAATGCAAATGCAATAATAG---CAACA---AACACACG----------------------AA-GCGAATGCAATTGC-T--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................AACACACACTCACA----------------------CA--C----AT-GT............................2112.00200002000000000000
..........................................................................................................................ACAGATTGTAAGCCTTCACCA-----................................................................................................................................................................................................................................................................................................2111.00110000000000000000
......................................................................................................................TAACACAGATTGTAAGCCTTC.........................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..............................................................................................................................................................................................................................................ATGCAAATGCAATAATAG---CA...............................................................................................................................................................................2011.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ACACTCACA----------------------CA--C----AT-GTA-GCCT......................2111.00101000000000000000
................AAGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.......................TCGAC--------TGA--GCGT-GCGG---CA-AGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................AAGCTGGTCGAC--------TGA--GCGT-GT....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..................................................................................................................CAGGTAACACAGATTGTAAGCC............................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....................TGGTCGAC--------TGA--GCGT-GCGT---T..............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.......................TCGAC--------TGA--GCGT-GCGG---CA-AGTATAAA....................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.....................GGTCGAC--------TGA--GCGT-GCGG---CA-G...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..........................................................................................................................ACAGATTGTAAGCCTTCACCG-----................................................................................................................................................................................................................................................................................................2111.00110000000000000000
............CGTTAAGCTGGTCGAC--------TGA--GC.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
TTGGATACTTAACTTTAAGCTGGTCGAC--------GGA--GAGT-GCGG---CA-AGTATAAAGGTGAGTGAGTTT-AAAG----------G---------------CCAGCACAGGTAACACAGGTTTTAAGCCTTTACCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAGCCTAATGCAAATGCAATAATAG---CAACA---AACACACG----------------------AA-GCGAATGCAATTGC-C--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................T-GCGG---CA-AGTATAAAGGTGAG..............................................................................................................................................................................................................................................................................................................................................................................2112.0021100
............................................................TAAAGGTGAGTGAGTTT-AAAG----------........................................................................................................................................................................................................................................................................................................................................................2112.0020200
.........TAACTTTAAGCTGGTCGAC--------GGA--GA.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..............TTAAGCTGGTCGAC--------GGA--GAGT-......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.................AGCTGGTCGAC--------GGA--GAGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......CTTAACTTTAAGCTGGTCGAC--------G...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.....................................................................GTGAGTTT-AAAG----------G---------------CCAGCAC.................................................................................................................................................................................................................................................................................................................................2011.0011000
.........................................GAGT-GCGG---CA-AGTATAAAGGT.................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................CTGGTCGAC--------GGA--GAGT-GCGG---C..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................TGGTCGAC--------GGA--GAGT-GCGG---C..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................TAG---CAACA---AACACACG----------------------AA-GCG.....................................................................................................................................2111.0011000
..........................................AGT-GCGG---CA-AGTATAAAGGT.................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
................AAGCTGGTCGAC--------GGA--GAGT-GCGG---CA-A...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.................AGCTGGTCGAC--------GGA--GAGT-GCGT---T..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.....................................................CA-AGTATAAAGGTGAGTGAGT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................AAGCTGGTCGAC--------GGA--GAGT-GCG...................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
TTGGATACTTAACTTCAAGCTGGTCGAC--------TGA--GCGT-GCTG---CT-AGTATAAAGGTGAGTGAGCTT-AGAG----------G---------------CCAGCACACGTAACACAGATTTTAGGCATTT-CCA-----TGCA--AA--CACACATGTA-------------TG----------------------------GAGACCAAACAAAATTTGCAAAA------------GCAATAACAG---CAACA---AATACACG----------------------AA-GCGAATGCAATTGC-T--CAC--TCA------------------T----GCAT--GCAAACACACACTCACA----------------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................AAGCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2219.0090000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000010000000000000010
................AAGCTGGTCGAC--------TGA--GCGT-GCTG---C..............................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CAAGCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000100000000000
...............CAAGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
................AAGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........ACTTCAAGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................GCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................GCGT-GCTG---CT-AGTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
...........................................................................................................................................................A--CACACATGTA-------------TG----------------------------GAGACCA..........................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...............................................................AGGTGAGTGAGCTT-AGAG----------G---------------CC......................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTGGTCGAC--------TGA--GCGT-GCTG---C..............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................ACACATGTA-------------TG----------------------------GAGACCA..........................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-GCTG---...............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............CTTCAAGCTGGTCGAC--------TGA--GCG........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............CAAGCTGGTCGAC--------TGA--GCGT-GCTG---...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-GCTG---CT-AGT.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GAG----------G---------------CCAGCACACGTAACACAGAT....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTGAGTGAGCTT-AGAG----------G---------------CCA.....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.TGGATACTTAACTTCAAGCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTTCAAGCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................CG----------------------AA-GCGAATGCAATTGC-.........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGAGCTT-AGAG----------G---------------CCAGCACACG..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........TAACTTCAAGCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGAGCTT-AGAG----------G---------------CCAGCACA................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-GCTG---CT-A...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................AAGCTGGTCGAC--------TGA--GCG........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................AAGCTGGTCGAC--------TGA--GCGT-GCTG---CA-............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGGTCGAC--------TGA--GCGT-GCTG---C..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACTTCAAGCTGGTCGAC--------TGA--...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-GCTG---CA-............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................AGCTGGTCGAC--------TGA--GCGT-G.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............TTCAAGCTGGTCGAC--------TGA--GCGT-G.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGGTCGAC--------TGA--GCGT-GCTG---CT-AG..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCAAGCTGGTCGAC--------TGA--GCGT-GCT...................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...GATACTTAACTTCAAGCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATTGC-T--CAC--TCA------------------T----GCAT--GCAAACACAC.......................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGCTGGTCGAC--------TGA--GCGT-GCTG---CT-............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGGATACTTAACTTCAAGCTGGTCGAC--------................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACTTCAAGCTGGTCGAC--------TGA--GCG........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTGAGTGAGCTT-AGAG----------G---------------CCAGCA..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GCTG---CT-AGTATAAAGGTGAG..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................GCTGGTCGAC--------TGA--GCGT-GCTG---T..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GCA--AA--CACACATGTA-------------TG----------------------------GAGA.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................GTGAGCTT-AGAG----------G---------------CCAGCACA................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................ACA---AATACACG----------------------AA-GCGAA...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................AAGCTGGTCGAC--------TGA--GCGT-G.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTGGTCGAC--------TGA--GCGT-GCTG---...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................ACACATGTA-------------TG----------------------------GAGACCAA.........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-G.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CACTCACA----------------------CA--C----AT-GTA-GCCTT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGCTGGTCGAC--------TGA--GC.........................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAC--------TGA--GCGT-GCTG---CT-AG..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............TCAAGCTGGTCGAC--------TGA--GCGT-G.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................CTGGTCGAC--------TGA--GCGT-GCTG---CT-............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CACG----------------------AA-GCGAATGCAATTG...........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........AACTTCAAGCTGGTCGAC--------T...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................CGT-GCTG---CT-AGTATAAAG...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACTTAACTTCAAGCTGGTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................CACG----------------------AA-GCGAATGCAATTGC-T--......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCAAGCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCTGGTCGAC--------TGA--GCGT-GCTG---...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTGGTCGAC--------TGA--GCGT-GC....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........TAACTTCAAGCTGGTCGAC--------TGA--G..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................AAGCTGGTCGAC--------TGA--GCGT-GCTG---G..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................G---CT-AGTATAAAGGTGAGTGAG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............TTCAAGCTGGTCGAC--------TGA--GC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................ATAACAG---CAACA---AATACACG----------------------T..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CCA-----TGCA--AA--CACACATGT.............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGGATATTTAACTTTAAGCTGGTCGAC--------TGA--ACGT-GCTG---CA-AGCAAAAAGGTGAGTGAATTT-ACTG----------G---------------CCAACAGAAGTAGCACGGATTTCAGGTATTT-CCA-----TACA--AA--CACACATGCA-------------T-----------------------------GGGGCCAAACAAAATTTGCAA-G------GCAAATGCAATAACAG---CAACA---AACACAAG----------------------CA-GCGAATGCAATTGC-A--CAC--TCA------------------T----GCAT--A----------------CAAATACACA------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....ATATTTAACTTTAAGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
droYak3
TTGGATATTTAACTGTAAGCTGGTCGAC--------TGA--ACGT-ACTG---CA-AGCATAAAGGTGAGTGAATTT-ATTG----------G---------------CCAATACAGGTAGCACTGTATTCAGGTATTT-TTA-----TCCA--AA--CACACATGCA-------------TG----------------------------GGGGCCAAACAAAATTTGCAAAG------GTAAATGCAATAACAG---CAACA---AACACATG----------------------AA-GCGAATGCAATTGC-A--TAC--GCA------------------T----GCAT--A----------------CAAATACACA------------CA--C----AT-GTA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................TTA-----TCCA--AA--CACACATGCA-------------T..............................................................................................................................................................................................................................................................2011.00101000000000
......ATTTAACTGTAAGCTGGTCGAC--------T...............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TTGTTATCAAAACTTTGTGCTGGTTAAC--------CAA--CGTA-GCTG--GCT-TTAATAAAGGTGAGTTAAACGAATTT----------T---------------TTTTTCGTGGCAATACAGACTTGAGGTATTT-TCA-----TACA--AA--CACACATGCAC------------AG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCATTGACAATAACAA---AAATA---ACAACATT----------------------TA-GCTAATGCAATTTC-A--CAC--ACA------------------T----GCAT--A----------------TATATACC------------------C----AC-ACA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGGAGAACAAACACTTTGCTGGCTAAC--------CTA--AGGT-GCTC--TCA-GCAACAAAGGTAAGTCAAACGTAGTG----------G---------------GTAATACAGGCGAAACTGATTTGAGGTCTTT-TCA-----AACA--AA--CACACATGCAC------------TG----------------------------GGGGCCAAACAAAATTTGCAAAG------CCAAAGGCAATGACAA---CAATA---ACAACATT----------------------GG-GCCAGTGCAAT-GC-A--CAC--ACG------------------C----CTATACA--TATACCTATGTA--CAGATG----------------CA--C----AT-ACA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droTak1
TTGGAGAATCAACTTTTTGCTGGTCAAC--------TGA--AGGT-GCTG--GCACTCTATAAAGGTGAGCTAAATC-AATG----------G---------------GTAATACAGGTAAATCCGATTTGAGGTCTTT-TCA-----TACA--AA--CACACATGCAA------------AC----------------------------GGGGCCAAACAAAATTTGCAAAG------GCAAAGGCAATAACAA---AAATA---ACAACATT----------------------AG-GCGAATGCATTTGT-A--TAT--ATG------------------T----ATAT--A----------------CAATTACACATACG--------TA--C----AT-AAA-GCCTTCACCTAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droEle1
TTGGCAATTTACGTTTATGCTGGTTAAC--------TGAG-GTGTGGGTG--GAT-TATTCAAAAGTGAGTAAAACT-ATTG---------TG---------------ATAATACAGGTAACGCCGACGTGAGATCTTTTCGA-----TGCACAAACACACACATGCAC----------TTTG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAAGCAATAACAA---AAGTA---ACAACATT----------------------AA-GCGAATGCAATTGCCA--CAC--TCA------------------T----ATGT--A----------------CAAATGCATATT-G--------TA--T----AT-ATA-GCCTTCACCCAAATAAAATGCATCTTSizeHit CountTotal NormTotal
No Reads
droRho1
TTGGCAATATACATTTGTGCTGGTCAAC--------TGA--GGGT-GCTG--GAT-TAGTTAAAAGTGAGTAAAACT-GGTG---------GG---------------GTAATACAGGTAATATCCATTAGATATCTTT-TCA-----AACA--AA--CACACATGCAC----------T-TG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAGGCAATAACAA---AAATA---ACAACATT----------------------AA-GCGAATGCAGTTGC-A--CAT--TCT------------------C----ATAT--A----------------CAAATGCA------------------C----AA-ATA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droFic1
TTGGAAAATAGACTTTGTGCTGGATAAC--------TAA--GGGT-GTTG--GCA-TTCAAAAAGGTGAGTTGAGCAGAAGG----------G---------------AAAATACAAGTAATACTTATTTAAGGTATTTTCTA-----TACA--AA--CACATATGCAG------------TG----------------------------GGGGCCAAACAAAATTTGCAAAT------GCAAAGGCAATGACAA---AAATA---ACAACATC----------------------AG-CGCAATGCAATTGC-A--CAC--CCA------------------T----ATAT--A----------------CAAATGTAC--------------A--A----AT-ACA-GCCTTCACCCAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droKik1
TTGGCAATTGAACTTTGTGCGAGCTGCC------CCCGA--GTGT-GCTG--GCC-TAAATAAAGGTGAGTGGAAGA-GCTGGTT------GAGTTGCATTCTAATGGAAAAC----------------------------GC-----CACA--AA--TACACTTGCAC------------CC----------------------------AGGGCCAAACAAAATTTGCAAAG------GCAAA-------ACAA---C---A---ACAACGTCGGGGTTTTAG----------TTAAGCGAAATGCAATTGC-T--CAC--ACA------------------A----ACAC--A----------------CACTCGCAGACA----------CA--C----GG-ACA-GCCTTCACCTAAATAAAAT-------SizeHit CountTotal NormTotal
No Reads
droAna3
TTGCAA-TAGACCCGTGTTCGAGTGTCC------TTCGA--GTG--GCTG--GCA-CCAATAAAAGTAAGTGAAAAC-CGTGCC-AACCGT--GCTGG---------------------------------------TT-TCC-----AA----------------------------------------------------------------CCCATCCACAAATCGCATTG------GCAAAAACAAAAATAGAAGCAACA---ACAACCTC----------------------AA-CGGAATGCAACTGC-A--CAC--GCACA----------------C----CAACACA--------ACGACG--ACGGTGGGCAGG----------CA--G----AG-GCAGGCCTTCACCCAAATAAATT-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.TGCAA-TAGACCCGTGTTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............GTGTTCGAGTGTCC------TTCGA--GTG--GCTA--................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
droBip1
TTGCA-ATCAAACTGTGTACGAGTTTCC------TCCGA--GTG--GCTG--GCA-GCAACAAAAGTAAGTGAAAAC-CGTG----------G---------------CACATG---------CTAA----------TT-TC------CGCC--AA--------TCCAT------------AC----------------------------GGGGCCAAACACAATTTGCAC-G------GCAAAAACAAAAATAGAAACAACA---ACAACCCT----------------------AA-CGGAATGCAACTGC-A--CAC--GCACA----------------C----CAAT------------------------GCCAT----CAAATCTCTG--T----GG-GCA-GCCTTCACCCAAATAAATT-------SizeHit CountTotal NormTotal
No Reads
dp5
TTGGATACTCC-------------------------CG--CGC--TGCTGTTGCA-TTAGAGAACGTAAGTTGAGGG-CATGCT-TAATGC--GATGA--------------------------------TTGGCCTAT-TCG-----CGCA--AAAACGCACGCACA-------------CAAGGACCAGAGGCGAGAGCACA--------------CACGGATAGC------------------GCCAAACCAA---AACCA---AACACACA----------------------GA-GA----GCACCCAC-GCACAC--ACA------------------C----ACACACA----------------CACACACACACACACA------TACACTTTAAT-GCA-GCCTTCACCTAAATAA----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTGGATACTCC-------------------------CG--CGC--TGCTGTTGCA-TTAGAGAACGTAAGTTGAGGG-CATGCT-TAATGC--GATGA--------------------------------TTGGCCTAT-TCC-----CGCA--AAAACGCACGCACA-------------CAAGGACCAGAGGCGAGAGCACA--------------CACGGAT------------------AGCGCCAAACCAA---AACCA---AACACACA----------------------GA-GA----GCACCCAC-G--CACACACA------------------C----ACACACA--------CACACA--CACATATACA----------------CGTTTATGGCA-GCCTTCACCTAAATAA----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CCAACAACA---------------------------------------------------------------------ATTA----------G---------------AAAATGCAAATAAT-CAAATGTTAAATATTT-GCACCCAAGACA--AA--CACACACGCAC------------AC----------------------------A-------------------------------------------------------------------------------------------CATGCAAAC-------AC--ACA------------------T----G--------------GACACACA----------------------CA--C----AC-ACA-CACTT---------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CTAAGCATTAGAC--------AGTTGGT--------GCA--ACGT-GCGT---CA-AG---TAAGGTAAGTGGTT------G---------------------------------GGGT----------------AAGT-GCACCCGAGCAC--AC--GACACACACACGCACATGCACA-CGCACATG-------------CACACGCACACGGGCAAATACAGTTTGCAAAA------ACAAA-------ACAA---AAGCATTATT------TTTATTTTGTGCTTTTGCAACTAA-TG----GCACATAT-A--TGCGCATA------------------TTTATACAT--A----------------CGGCTGCACACA----------TT--G----AT-GCA-GCCTTCACCCAAATAA----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................ACATG-------------CACACGCACACGGGCA..........................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................CACGCACATGCACA-CGCACATG-------------..........................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
.........................................................G---TAAGGTAAGTGGTT------G---------------------------------GGG..............................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................GCACCCGAGCAC--AC--GACACC................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AAACAC---AAGCTGTGAAGC------TGCAACTTGCA--AGT--TGCAAC----------TAAATTAAATAA----------------------------------------------------------AGTTCATT-GCA-----TACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA------------------C----GCAC--ACACGTACACACTCACA----------------------CA--C----AT-GCA--CATATACACATACACAAT-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A------------------------------------------------------------------------------------------------------------------------------------GC--TC-TCA-----CACA--CA--CACACACACA-------------CAAAGATG----------------------CAAGCCAAACAGAGC-TGTAAAA------ACAAA------AACAA---ATGCGTTATT------TT----TTGCATTGCTACAACAAA-TG----GCACACAC-A--TACACATATATGTATATATGTGAACAT----GTAT--ACAAA------------CAGATGCACACA----------TT--G----AT-GCA-GCCTTCACCTAAATAG----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:36 AM