ID:

dsi_7335

 Coordinate:

3r:12613465-12613614 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_12612852_12613464_+]; CDS [3r_12612852_12613464_+]; intron [3r_12613465_12617809_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCCACAAGTAGGAATATGCGAATACGCATTCAAGTTGCCCAGTTCCGTGAGCTTAGTGGAAAAGTACCAGGCAAAGGTTTTAAGGGTGGGTTCGTATTCGGTTTTTTTTTCCGCTCCCCATACTCAAGGGGCGCGAATTCGACCAACCTCGGCGAATTGTGTTTGAGTAAATATTTAGAAGTAGATTCATAATT
**************************************************(((.(((((.......))))).)))(((((((.((((.....((((....((....((((.(((......))).))))...))......)))))))).)))))))((((.....(((.((.((((........)))).)))))...))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
...............GATTCACCCGACTCTTGGACAAGC................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................ATTCACCCGACTCTTGGACAAG.................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
............CCGGATTCACCCGACTCT............................................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................GACTCTTGGACAAGCGCTACT............................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................TCACCCGACTCTTGGACAAGCGCTACT............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............GATTCACCCGACTCTTGGACAAGCG.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............GGATTCACCCGACTCTTGGACAAG.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............GGATTCACCCGACTCTTGGACAAGC................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............GGATTCACCCGACTCTTGGACAA..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............GATTCACCCGACTCTTGGAC....................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......CCTCTCCGGATTCACCCGACTCTT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............CGGATTCACCCGACTCTTGGACA...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................ATTCACCCGACTCTTGGACAAGC................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................TTCACCCGACTCTTGGACAAG.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................CTCTTGGACAAGCGCTACTCAAA......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................TCTTGGACAAGCGCTACT............................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........CTCCGGATTCACCCGACTC............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................CACCCGACTCTTGGACAAGC................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................CTTGGACAAGCGCTACTCAAA......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GCGTGGGTTCGTATT................................................................................................ 15 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................AAAGTAGTAGGCAAAGGATTTAA............................................................................................................... 23 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................TTCGTATTCGGTTTTTTGGTC................................................................................... 21 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................ATTCGACCAAGCGCGG.......................................... 16 2 20 0.25 5 0 0 0 0 0 4 0 0 0 1 0
........................GACTCTGGGATAAGCGCT................................................................................................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................ACTCAAGGGGCGAGA.......................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................GTTTTAAAGGTGGCTTCG.................................................................................................... 18 2 13 0.15 2 0 2 0 0 0 0 0 0 0 0 0
..........................CTGTTGGACAAGCCCTAC.............................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
......................................................GTTCCCCAAGTAGGA..................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................GTAACAGGCAAGGGTTGTA................................................................................................................ 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GGCGTATGGTGTTCGAGTA......................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................TTTGAGTCAATATTTAG................ 17 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................TAAGGGTGGGGACGTA.................................................................................................. 16 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................GTGGGCTGAGTGGAAAAG.................................................................................................................................. 18 2 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0
.........................ACTCTGGGATAAGCGC................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................GAGCTTAGTTCAAAAGGAC............................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCCGTCGGAGAGGCCTAAGTGGGCTGAGAACCTGTTCGCGATGAGTTTCCACTCAAGGTGTTCATCCTTATACGCTTATGCGTAAGTTCAACGGGTCAAGGCACTCGAATCACCTTTTCATGGTCCGTTTCCAAAATTCCCACCCAAGCATAAGCCAAAAAAAAAGGCGAGGGGTATGAGTTCCCCGCGCTTAAGCTGGTTGGAGCCGCTTAACACAAACTCATTTATAAATCTTCATCTAAGTATTAA
**************************************************(((.(((((.......))))).)))(((((((.((((.....((((....((....((((.(((......))).))))...))......)))))))).)))))))((((.....(((.((.((((........)))).)))))...))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M023
head
.................................................................................CGTGAGTTCAAAGGGTCAAAGC................................................................................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................CGTGAGTTCAAAGGGTCAA...................................................................................................................................................... 19 2 5 1.20 6 0 5 0 0 0 0 0 0 1 0
.................................................................................CGTGAGTTCAAAGGGTCAAAG.................................................................................................................................................... 21 3 7 1.14 8 1 6 0 0 0 0 0 0 0 1
................................................................................GCGTGAGTTCAAAGGGTCAA...................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................GCGATGTGTTTCCACTCACGGTAT............................................................................................................................................................................................ 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATCGGGTTGGAGCCGCTT...................................... 19 2 3 0.67 2 0 0 0 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAGGCGAGGGGTGT........................................................................ 18 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................AAACGGGTTGGAGCCGCTTAG.................................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
................................................................................GCGTGAGTTCAGAGGGTCAA...................................................................................................................................................... 20 3 8 0.38 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTAATCGGGTTGGAGCCGCTTAG.................................... 23 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TAAATCGGGTTGGAGCCGCTTAA.................................... 23 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................CAAAAAAAAAGGCGAAGGGTT......................................................................... 21 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0
...........................................................................................ACGGCTCAAGGAACTCGTATC.......................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0
..................................................................................GTGAGTTCAAAGGGTCAA...................................................................................................................................................... 18 2 15 0.20 3 0 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAAATAGGCGAGTGGTA......................................................................... 19 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.................................................................................CGTGAGTTCAAAGGGTCA....................................................................................................................................................... 18 2 12 0.17 2 0 2 0 0 0 0 0 0 0 0
................................................TCCGCTCAAGGTGTGAATC....................................................................................................................................................................................... 19 3 13 0.15 2 2 0 0 0 0 0 0 0 0 0
................................................TCCGCTCAAAGTGTTAATC....................................................................................................................................................................................... 19 3 20 0.15 3 2 0 0 0 0 0 0 0 0 1
..................................................................................GTGAGTTCAAAGGGTCAAAG.................................................................................................................................................... 20 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AATCGGGTTGGAGCCACTT...................................... 19 3 18 0.06 1 0 0 0 0 1 0 0 0 0 0
............................GAGCCTGTTCGCGACGA............................................................................................................................................................................................................. 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12613415-12613664 + dsi_7335 TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCA---------------------------------------------------------------TTCAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAG--CT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT-------AAGGGTGGGTTCG-T-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA-----------------------------CT--CAAGGGGCGCGAATTCGACCAACCTCGGCGAATTGTGT-------------------------------------TTGAGTAAATA-----------------------------------------------T-TT--AGAAGTA-------------------GATTCATAATT
droSec2 scaffold_0:13440173-13440422 + TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCT---------------------------------------------------------------TTCAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAG--CT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT-------AAGGGTGGGTTCG-C-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA-----------------------------CT--CAAGGGGCGCGAGTTCGACTAAACTCGGCGAATTGTGT-------------------------------------TTGAGTAAATA-----------------------------------------------T-TT--AGAAGTA-------------------GATTCATAATT
dm3 chr3R:8544937-8545174 - TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCT---------------------------------------------------------------TTTAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAA--CT-TAGTGGAAAAATACCAGG-CAAAGGTTTT------TAAGGGTGGGTTCG-C-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA---------------------------------------------------------TCGGCGAATTGTGTTA-----------------------GT-GAACCGTGTTTGGGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GAGTCATAATT
droEre2 scaffold_4770:13103180-13103425 + TCGGCAGCATCTCCGGATTTGACCGACTTTATGACAAGCGCTACTCAAAGGTGAGTTCC-ACACGTAG----------------------------------------------------------------------------------TAAGTCGCCCGGTTCC--------------------------------------------------------------------------------ATGGG--CTCCAGTGGAAAAATACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------TTCGGGTT-----TGTTTTTTTGCTTCCCATG-----------------------------CT-GAAAGGGGCGCGCATTCGACCAAACTCGGCGAATTTTGTTA-----------------------GA-GCACAGTGTTTGGGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GATTTTTAGTT
droYak3 3R:12831925-12832177 - TCGGCAGCATCTCCGGATTTGCCCGACTTTACGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATAT--------GCT---------------------------------------------------------------TTCAAGTCGCCCGGTTCC--------------------------------------------------------------------------------ATGGG--CT-CAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------CTCGG-TT-----TTTTT-TTTGCTTCCCATG-----------------------------CT--CAAGGGGCGCGAATTCGACCAAACTCGGCGAATTTTGTTA-----------------------GA-GCACAGTGTTTGAGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GATTTATAGTT
droEug1 scf7180000409802:1517762-1518059 + TTGGCAGCATCTCCGGATTTAACCGACTTTTCGACAAACGCTACTCAAAGGTAAGTTCT-ATGT------------------GCTC--------------------------------------------------------------TTTAAGTTATCCAGTTCCGTGTCGATACCCCGACC---------TCC-CTTTCCA------------G-----------------------TGTCT--TAAAG--TT-TAGTGGAAAAGTACCAGC-CAAAGGTTTT--------AGGGTGGGTTTGCTTA------------CTCGG-CT-----TTTATTTCTTTT--CGGTA----TTTTTGGGTATTTTTGTTATTGGGTAT--CAAAGGGAGGGACTT-------------------TTATTA-----------------------GA-GCTCTGTGTTAGAGGGAAA-TTTA-------------------------------------------T-TT--AAAGGTGAATAAACCCGG--------AAGTTTTACTT
droBia1 scf7180000299102:1433741-1434011 + TGGGCAATATCTCCGGCTTCGGACGCCTCTACGACAAGCGCTACTCGAAGGTGAGTTCC-ATAGTTC------------------C---AT--------------------------------------------------------------GTCCGCTAGTTC-----------------TCGGGCCATCCCCT-TTGC-CGCGCGCCC-----------------------------------ATGGG--C--TTGTGGAAAAGTACCAGG-CAAAGGTTTC--------GGGGTGGGTTCG-C-C------------TTTGG-GT-----TC----TCCGCTTTTGGTG-----------------------TAGGGTGTC-GAAAGGGCCAGCATT-------------------TTAATA-----------------------GA-GAGCCGGGCTTGGGGAAGTA-----------------------------------------------T-TTCAACCGGAATACAAACCCGGAAATTTGTT-CTAAAAATC
droTak1 scf7180000415878:298251-298515 + TTGGCAGCATCTCCGGATTCGGCCGACTTTTCGACAAGCGCTACTCAAAGGTGAGTTTT-ATAT------------------TCTC---TTTA----GTTATT------------------------------------------------TAGTTCTCTAGTTCCAT-TCCATACGGCCATC---------CCCTTTCGC-CGC----------G-----------------------GGGCT--TTAAG--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------TTCGG-GT-----TT----TCTGGTTTTGGTG---------------------TGTTGGGTAT--CAAGGGGCGAGAATTCGTCTAAGCTTGGGGAATTTTGG-------------------------------------------------------------------------------------------------TT--AGAATGT-------------------TATTAATTATA
droEle1 scf7180000491008:1724110-1724366 + TCGGCAGCATCTCCGGATTTGGACGACTTCAAGACAAGCGCTACGCAAAGGTGGGTCTCCATAT------------------ACTTTCCGTGCCCCTTCGGTTTTGTTATTTCA-----------------------------AACGC----------------------------------C--------TCCC-CTCGC-CAC----------G-----------------------AGGCA--TAAAA--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCC-C-G------------TTGGG-GT-----TT----TCTGGTTTCGGTA-----------------------------------CAGGGCAAGAATTTGAGTACGCTCGAAGGCACTTGTTA-----------------------GA--------------AGCGCT------------------------------------------------T-TT--AGAGGAA-------------------AATATTTAA-T
droRho1 scf7180000758339:5635-5772 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCC-C-G------------CTCCG-TTCAGGTTT----TTCGTTTTCGGTA-----------------------------------CAGGGCGAGAATTTGACTAGCCTCGGAGGCATTTGTTA-----------------------GA--------------AGCTCTA-----------------------------------------------T-TA--AA---AA-------------------AATTCCTAACG
droFic1 scf7180000453800:991431-991687 - TCGGCAGCATCTCCGGATTTGACCGACTTTACAACAAGCGCTACTCAAAGGTGAGTTCT-ATAT------------------TCTT---TTTT----CCGGTTTGGTTCTCT-------------------------------AACGC----------------------------------C--------TCCC-CTTAC-CGC----------A-----------------------AGGCT--TAGAA--AT-TTGTGGAAAAGTACCAGG-CAAAGGTT-T--------GGGGTGGGTTCT-G-A------------TTCCC-TT-----TTTTT---------CGGCG-----------------------TAGAGTGT--CAA-GGGCTAGAATTTTGCTAAGAATTAGGAACTG-GT-------------------------------------TGAATTACACA-----------------------------------------------T-CT--AGATTTA------------AATT-GTCTTTCGTTTTT
droKik1 scf7180000302699:228358-228520 - TGGGCAGCATCTCCGGATTCGATCGTCTCTACGACAAGCGCTACTCAAAGGTGAGTTCT-ATC------------------------------------------------------------------------------------------------TATTTCCTGGCCATTCGCTTGAAT---------TCT-CTTGCTCGC----------G-----------------------ACGCC--TAAAG--TA-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTTT-T-A------------T--GG-TT-----ATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:9605729-9605996 + CCGGCAGCATCTCCGGACTGGATCGTCTCTACGGAAAACGTTACTCAAAGGTGAGTGGT-GCTACTGG---------------------------------TTCTGTTCTCTCATCTTTCTTCTTTTCTGCTGTGGACCACCC--------------CTCCG------------------ACCCGGTCTTC----------G--C----------G-----------------------GTTCT--AACTA--AG-TTGTGGAAAAGTACCAGG-CAAAGGTTCC--------AGGGTGGGTTTCTC-GTGAGGTTTCGCTTTCGGG-T-----T-------------------------------------------------------CGGCTTGTATGTGACTGT--------------GTTT----------------ATATG--AG-AATTTTTTTTTGGGGGAAT-TCTC-------------------------------------------G-TT--CAAG---------------------------GGAATT
droBip1 scf7180000396691:2309589-2309862 + TGGGCAGCATCTCTGGACTGGATCGTCTCTATGGAAAGCGTTACGCCAAGGTGAGTAGT-ACTACTGG---------------------------------TTCTGTTCTCTCATCATTCTTATTTTT---TGTGGACCACCC--------------CTCCGCC---------------GACCCGGTCTTC----------T--C----------G-----------------------GTTCTAAAAAA-AAAG-TAGTGGAAAAATACCAGG-CAAAGGTTCC--------AGGGTGGGTTTCTC-GTGAGGTTTCGCTTTCGGG-T-----T-------------------------------------------------------CGGCTTCTATGTGACTGT--------------GTTT-----------------------GTATGTTATTTTTTGGGGATATG-----------------------------------------------TATT--AGACATG----------G--------GGTTTATAAAC
dp5 2:11650936-11651092 + TTGGAAGCATCTCCGGATTAACCCGTCTCCACGACAAGCGCTATGCAAAGGTGAGTCCC-CG-----------------------------------------------------------------------------------------------CTCCGCT------------------GCGGCTCTCTTCTT-ATGT-ATTTAGCCCTTGGG-----------------------CAGCA--GAAA-TTTT-GAGTGGAAAAGTACCAGG-CAAAAGTGTT--GCGTGCAGGGTGGGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:8863041-8863197 - TTGGAAGCATCTCCGGATTAACCCGTCTCCACGACAAGCGCTATGCAAAGGTGAGTCCC-CG-----------------------------------------------------------------------------------------------CTCCGCT------------------CCGGCTCTCTTCTT-ATGT-ATTTAGCCCTTGGG-----------------------CAGCA--GAAA-TTTT-GAGTGGAAAAGTACCAGG-CAAAAGTGTT--GCGTGCAGGGTGGGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004902:11263905-11264238 - TTGGCAAAGTCTCTGGATTCGATCGCCTTCACGACAAACGCTATTCAAAGGTAAGTCTC-TCAAAAAGACAAA-----------------------------------------------------------------------------------------------------------------------AACT-TGGA-CACACACACACAGACACACTCACACATTCATACATATATGT---GTGAATTCA-AAGTGGAAAAGTACCAAGACGAAATTTTT--GCCAAAAGGGTGGGTTTT-T--------------TTCGG-TT-----GTTGTTGCC-----CTAGG----------------------------CCT--CAATGGGCTTTCATTTGAATGT--------------GTGGCACAAGAAGCAAAGGCAAATGTAGA-T-TCTATATTT-----AAT-CCTAGTTGATAGCAAAAAAAAAAGGAAGGCAAACCAATCATCTAATGG-AT--AGATAAA-------------------GATTCATAAAT
droVir3 scaffold_12855:4326262-4326502 + dvi_3870 TCGGCAACGTCTCTGGACTCGAGCGCCTGCAAAACAAACGCTACAACAAGGTAAGTTAG-AAGA--AG---------AAACCGCT---------------------------------------------------------------T----GCTACCCA--TAC--------------------------------------------------------------------------------GTTGG--AA-TAGCGGAAAAGTACCAGC-ATAGAGCACACAACAGACAGAACGGGGTTG-T--------------TTCGG-AT-----ATACA----TATATATGTATGTATTTGTAGATATGTATA---------TA--CTAGAAACACACACACAAACACACTCCAAACGCCGCAT-------------------------------------TAGCAAC-----------------------------------------------------------------------------------ATGTTAGACTG
droMoj3 scaffold_6540:8683417-8683523 + TCGGCAGTGTCTCTGGACTCGATCGCATGAACCTAAAGCGCTACAATAAGGTGAGTTTA-AAGA--------------------------------------------------------------------------------AAGCCGCAAGCTGCCCA--TAC--------------------------------------------------------------------------------GCGGG--AA-TAGTGGAAAAGTACCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:6897513-6897573 + CGGGTAATCTATCGGGACTCGATCGTCTGTACAACAAACGCTTCAGCAAGGTAAGTTCT-AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCA---------------------------------------------------------------TTCAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAG--CT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT-------AAGGGTGGGTTCG-T-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA-----------------------------CT--CAAGGGGCGCGAATTCGACCAACCTCGGCGAATTGTGT-------------------------------------TTGAGTAAATA-----------------------------------------------T-TT--AGAAGTA-------------------GATTCATAATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............GATTCACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
................ATTCACCCGACTCTTGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
............CCGGATTCACCCGACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
........................GACTCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
..................TCACCCGACTCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...............GATTCACCCGACTCTTGGACAAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..............GGATTCACCCGACTCTTGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..............GGATTCACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..............GGATTCACCCGACTCTTGGACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............GATTCACCCGACTCTTGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......CCTCTCCGGATTCACCCGACTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.............CGGATTCACCCGACTCTTGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
................ATTCACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.................TTCACCCGACTCTTGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..........................CTCTTGGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................TCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..........CTCCGGATTCACCCGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...................CACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
............................CTTGGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCT---------------------------------------------------------------TTCAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAG--CT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT-------AAGGGTGGGTTCG-C-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA-----------------------------CT--CAAGGGGCGCGAGTTCGACTAAACTCGGCGAATTGTGT-------------------------------------TTGAGTAAATA-----------------------------------------------T-TT--AGAAGTA-------------------GATTCATAATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................CGACTCTTGGACAAGCGCTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................GACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...............GATTCACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.........TCTCCGGATTCACCCGACTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.....AGCCTCTCCGGATTCACCCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..........CTCCGGATTCACCCGACTCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
dm3
TCGGCAGCCTCTCCGGATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATATGCGAATACGCT---------------------------------------------------------------TTTAAGTTGCCCAGTTCC--------------------------------------------------------------------------------GTGAA--CT-TAGTGGAAAAATACCAGG-CAAAGGTTTT------TAAGGGTGGGTTCG-C-A------------TTCGG-TT-----TTTTTTTCCGCTCCCCATA---------------------------------------------------------TCGGCGAATTGTGTTA-----------------------GT-GAACCGTGTTTGGGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GAGTCATAATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................GGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGAATTGTGTTA-----------------------GT-G.............................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTGGACAAGCGCTACTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000
...........TCCGGATTCACCCGACTCTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTGGACAAGCGCTACTCAAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000
.................TTCACCCGACTCTTGGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCGACTCTTGGACAAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................TCACCCGACTCTTGGACAAGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTCCGGATTCACCCGACTCTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCGACTCTTGGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACTCTTGGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GGGTGGGTTCG-C-A------------TTCGG-T..........................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000
.................TTCACCCGACTCTTGGACAAGCGCTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000
.................................ACAAGCGCTACTCAAAGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
........................GACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTGGACAAGCGCTACTCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
................ATTCACCCGACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGACAAGCGCTACTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGGACAAGCGCTACTCAAAGGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................TCTTGGACAAGCGCTACTCAAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................AGGGTGGGTTCG-C-A------------TTCG.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.CGGCAGCCTCTCCGGATTCACCCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GGTTTT------TAAGGGTGGGTTCG-C-..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGACAAGCGCTACTCAAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................T-----TTTTTTTCCGCTCCCCATA---------------------------------------------------------TCGGC...................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTCC-ACAAGTAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTCTCCGGATTCACCCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GG-CAAAGGTTTT------TAAGGGTGGGT....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................GACTCTTGGACAAGCGCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AGTAGGAATATGCGAATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................CACCCGACTCTTGGACAAGCGCTACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACTCTTGGACAAGCGCTACTCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GGATTCACCCGACTCTTGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------------TCGGCGAATTGTGTTA-----------------------G................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............CCGGATTCACCCGACTCTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGACTCTTGGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATTCACCCGACTCTTGGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CACCCGACTCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCGACTCTTGGACAAGCGCTACTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCGACTCTTGGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTGGACAAGCGCTACTCAAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGGCAGCCTCTCCGGATTCACCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTGGACAAGCGCTACTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTA-----------------------GT-GAACCGTGTTTGGGT...............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................ACCCGACTCTTGGACAAGCGCTACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCAGCCTCTCCGGATTCACCCGACTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...GCAGCCTCTCCGGATTCACCCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................CCCGACTCTTGGACAAGCGCTACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................TCTTGGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GGATTCACCCGACTCTTGGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................CT---------------------------------------------------------------TTTAAGTTGCCCAGTTCC--------------------------------------------------------------------------------G...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGGATTCACCCGACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGAATTGTGTTA-----------------------GT-..............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCCGGATTCACCCGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GGATTCACCCGACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCGACTCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTA-----------------------GT-GAACCGTGTTTGGGTAA.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGGATTCACCCGACTCTTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACTCTTGGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................TCACCCGACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCGGATTCACCCGACTCTTGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCCGGATTCACCCGACTCTTGGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GTGGAAAAATACCAGG-CAAAG..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CCCCATA---------------------------------------------------------TCGGCGAATTGTGT..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTGAA--CT-TAGTGGAAAGG.......................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCGGCAGCATCTCCGGATTTGACCGACTTTATGACAAGCGCTACTCAAAGGTGAGTTCC-ACACGTAG----------------------------------------------------------------------------------TAAGTCGCCCGGTTCC--------------------------------------------------------------------------------ATGGG--CTCCAGTGGAAAAATACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------TTCGGGTT-----TGTTTTTTTGCTTCCCATG-----------------------------CT-GAAAGGGGCGCGCATTCGACCAAACTCGGCGAATTTTGTTA-----------------------GA-GCACAGTGTTTGGGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GATTTTTAGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................TTATGACAAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000200
..............................ATGACAAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
.....AGCATCTCCGGATTTGACCGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100100
..........CTCCGGATTTGACCGACTTTATGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTA-----------------------GA-GCACAGTGTTTGGGTA..............................................................................................2311.0010100000
..........................CTTTATGACAAGCGCTACTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..................TTGACCGACTTTATGACAAGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................TTATGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...........................TTTATGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........ATCTCCGGATTTGACCGACTTTATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........ATCTCCGGATTTGACCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...................TGACCGACTTTATGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.............................TATGACAAGCGCTACTCAAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
..........................................................................................................................................................................................................................................................................................TTT--------AGGGTGGGTTCG-C-A------------TTCGGGT..........................................................................................................................................................................................................................................2411.0011000000
.................TTTGACCGACTTTATGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..GGCAGCATCTCCGGATTTGACCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.....AGCATCTCCGGATTTGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................TTGACCGACTTTATGACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..........................CTTTATGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
................ATTTGACCGACTTTATGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........................GACTTTATGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................................GACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
................................GACAAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........ATCTCCGGATTTGACCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................................GTGAGTTCC-ACACGTAG----------------------------------------------------------------------------------TAAGTCGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.....AGCATCTCCGGATTTGACCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..............................ATGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................ATGACAAGCGCTACTCAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................ACAAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5011000000
..................................CAAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000100
...................................AAGCGCTACTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710001000
droYak3
TCGGCAGCATCTCCGGATTTGCCCGACTTTACGACAAGCGCTACTCAAAGGTGAGTTCC-ACAAGTAGGAATAT--------GCT---------------------------------------------------------------TTCAAGTCGCCCGGTTCC--------------------------------------------------------------------------------ATGGG--CT-CAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------CTCGG-TT-----TTTTT-TTTGCTTCCCATG-----------------------------CT--CAAGGGGCGCGAATTCGACCAAACTCGGCGAATTTTGTTA-----------------------GA-GCACAGTGTTTGAGTAAATA-----------------------------------------------T-TT--AGAGGTA-------------------GATTTATAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................TTACGACAAGCGCTACTCAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGTTA-----------------------GA-GCACAGTGTTTGA.................................................................................................2411.00100000010000
........................GACTTTACGACAAGCGCTACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................GG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------CTC..............................................................................................................................................................................................................................................2911.00100000010000
................................GACAAGCGCTACTCAAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GATTTGCCCGACTTTACGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....AGCATCTCCGGATTTGCCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TTGGCAGCATCTCCGGATTTAACCGACTTTTCGACAAACGCTACTCAAAGGTAAGTTCT-ATGT------------------GCTC--------------------------------------------------------------TTTAAGTTATCCAGTTCCGTGTCGATACCCCGACC---------TCC-CTTTCCA------------G-----------------------TGTCT--TAAAG--TT-TAGTGGAAAAGTACCAGC-CAAAGGTTTT--------AGGGTGGGTTTGCTTA------------CTCGG-CT-----TTTATTTCTTTT--CGGTA----TTTTTGGGTATTTTTGTTATTGGGTAT--CAAAGGGAGGGACTT-------------------TTATTA-----------------------GA-GCTCTGTGTTAGAGGGAAA-TTTA-------------------------------------------T-TT--AAAGGTGAATAAACCCGG--------AAGTTTTACTTSizeHit CountTotal NormTotal
No Reads
droBia1
TGGGCAATATCTCCGGCTTCGGACGCCTCTACGACAAGCGCTACTCGAAGGTGAGTTCC-ATAGTTC------------------C---AT--------------------------------------------------------------GTCCGCTAGTTC-----------------TCGGGCCATCCCCT-TTGC-CGCGCGCCC-----------------------------------ATGGG--C--TTGTGGAAAAGTACCAGG-CAAAGGTTTC--------GGGGTGGGTTCG-C-C------------TTTGG-GT-----TC----TCCGCTTTTGGTG-----------------------TAGGGTGTC-GAAAGGGCCAGCATT-------------------TTAATA-----------------------GA-GAGCCGGGCTTGGGGAAGTA-----------------------------------------------T-TTCAACCGGAATACAAACCCGGAAATTTGTT-CTAAAAATCSizeHit CountTotal NormTotal
No Reads
droTak1
TTGGCAGCATCTCCGGATTCGGCCGACTTTTCGACAAGCGCTACTCAAAGGTGAGTTTT-ATAT------------------TCTC---TTTA----GTTATT------------------------------------------------TAGTTCTCTAGTTCCAT-TCCATACGGCCATC---------CCCTTTCGC-CGC----------G-----------------------GGGCT--TTAAG--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCG-C-A------------TTCGG-GT-----TT----TCTGGTTTTGGTG---------------------TGTTGGGTAT--CAAGGGGCGAGAATTCGTCTAAGCTTGGGGAATTTTGG-------------------------------------------------------------------------------------------------TT--AGAATGT-------------------TATTAATTATASizeHit CountTotal NormTotal
No Reads
droEle1
TCGGCAGCATCTCCGGATTTGGACGACTTCAAGACAAGCGCTACGCAAAGGTGGGTCTCCATAT------------------ACTTTCCGTGCCCCTTCGGTTTTGTTATTTCA-----------------------------AACGC----------------------------------C--------TCCC-CTCGC-CAC----------G-----------------------AGGCA--TAAAA--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCC-C-G------------TTGGG-GT-----TT----TCTGGTTTCGGTA-----------------------------------CAGGGCAAGAATTTGAGTACGCTCGAAGGCACTTGTTA-----------------------GA--------------AGCGCT------------------------------------------------T-TT--AGAGGAA-------------------AATATTTAA-TSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--TT-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTCC-C-G------------CTCCG-TTCAGGTTT----TTCGTTTTCGGTA-----------------------------------CAGGGCGAGAATTTGACTAGCCTCGGAGGCATTTGTTA-----------------------GA--------------AGCTCTA-----------------------------------------------T-TA--AA---AA-------------------AATTCCTAACGSizeHit CountTotal NormTotal
No Reads
droFic1
TCGGCAGCATCTCCGGATTTGACCGACTTTACAACAAGCGCTACTCAAAGGTGAGTTCT-ATAT------------------TCTT---TTTT----CCGGTTTGGTTCTCT-------------------------------AACGC----------------------------------C--------TCCC-CTTAC-CGC----------A-----------------------AGGCT--TAGAA--AT-TTGTGGAAAAGTACCAGG-CAAAGGTT-T--------GGGGTGGGTTCT-G-A------------TTCCC-TT-----TTTTT---------CGGCG-----------------------TAGAGTGT--CAA-GGGCTAGAATTTTGCTAAGAATTAGGAACTG-GT-------------------------------------TGAATTACACA-----------------------------------------------T-CT--AGATTTA------------AATT-GTCTTTCGTTTTTSizeHit CountTotal NormTotal
No Reads
droKik1
TGGGCAGCATCTCCGGATTCGATCGTCTCTACGACAAGCGCTACTCAAAGGTGAGTTCT-ATC------------------------------------------------------------------------------------------------TATTTCCTGGCCATTCGCTTGAAT---------TCT-CTTGCTCGC----------G-----------------------ACGCC--TAAAG--TA-TAGTGGAAAAGTACCAGG-CAAAGGTTTT--------AGGGTGGGTTTT-T-A------------T--GG-TT-----ATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CCGGCAGCATCTCCGGACTGGATCGTCTCTACGGAAAACGTTACTCAAAGGTGAGTGGT-GCTACTGG---------------------------------TTCTGTTCTCTCATCTTTCTTCTTTTCTGCTGTGGACCACCC--------------CTCCG------------------ACCCGGTCTTC----------G--C----------G-----------------------GTTCT--AACTA--AG-TTGTGGAAAAGTACCAGG-CAAAGGTTCC--------AGGGTGGGTTTCTC-GTGAGGTTTCGCTTTCGGG-T-----T-------------------------------------------------------CGGCTTGTATGTGACTGT--------------GTTT----------------ATATG--AG-AATTTTTTTTTGGGGGAAT-TCTC-------------------------------------------G-TT--CAAG---------------------------GGAATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......GCATCTCCGGACTGGATCGTCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................GGATCGTCTCTACGGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............GACTGGATCGTCTCTACGGAAAACGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
droBip1
TGGGCAGCATCTCTGGACTGGATCGTCTCTATGGAAAGCGTTACGCCAAGGTGAGTAGT-ACTACTGG---------------------------------TTCTGTTCTCTCATCATTCTTATTTTT---TGTGGACCACCC--------------CTCCGCC---------------GACCCGGTCTTC----------T--C----------G-----------------------GTTCTAAAAAA-AAAG-TAGTGGAAAAATACCAGG-CAAAGGTTCC--------AGGGTGGGTTTCTC-GTGAGGTTTCGCTTTCGGG-T-----T-------------------------------------------------------CGGCTTCTATGTGACTGT--------------GTTT-----------------------GTATGTTATTTTTTGGGGATATG-----------------------------------------------TATT--AGACATG----------G--------GGTTTATAAACSizeHit CountTotal NormTotal
No Reads
dp5
TTGGAAGCATCTCCGGATTAACCCGTCTCCACGACAAGCGCTATGCAAAGGTGAGTCCC-CG-----------------------------------------------------------------------------------------------CTCCGCT------------------GCGGCTCTCTTCTT-ATGT-ATTTAGCCCTTGGG-----------------------CAGCA--GAAA-TTTT-GAGTGGAAAAGTACCAGG-CAAAAGTGTT--GCGTGCAGGGTGGGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...GAAGCATCTCCGGATTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..........CTCCGGATTAACCCGTCTCCACGACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...GAAGCATCTCCGGATTAACCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.......................CGTCTCCACGACAAGCGCTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................ATTAACCCGTCTCCACGACAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
.................................................................................................................................................................................................................................................GCA--GAAA-TTTT-GAGTGGAA..........................................................................................................................................................................................................................................................................................................1911.0010000100000
...GAAGCATCTCCGGATTAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TTGGAAGCATCTCCGGATTAACCCGTCTCCACGACAAGCGCTATGCAAAGGTGAGTCCC-CG-----------------------------------------------------------------------------------------------CTCCGCT------------------CCGGCTCTCTTCTT-ATGT-ATTTAGCCCTTGGG-----------------------CAGCA--GAAA-TTTT-GAGTGGAAAAGTACCAGG-CAAAAGTGTT--GCGTGCAGGGTGGGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......GCATCTCCGGATTAACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.TGGAAGCATCTCCGGATTAACCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................................................AGTGTT--GCGTGCAGGGTGG......................................................................................................................................................................................................................................................................1911.001001000
droWil2
TTGGCAAAGTCTCTGGATTCGATCGCCTTCACGACAAACGCTATTCAAAGGTAAGTCTC-TCAAAAAGACAAA-----------------------------------------------------------------------------------------------------------------------AACT-TGGA-CACACACACACAGACACACTCACACATTCATACATATATGT---GTGAATTCA-AAGTGGAAAAGTACCAAGACGAAATTTTT--GCCAAAAGGGTGGGTTTT-T--------------TTCGG-TT-----GTTGTTGCC-----CTAGG----------------------------CCT--CAATGGGCTTTCATTTGAATGT--------------GTGGCACAAGAAGCAAAGGCAAATGTAGA-T-TCTATATTT-----AAT-CCTAGTTGATAGCAAAAAAAAAAGGAAGGCAAACCAATCATCTAATGG-AT--AGATAAA-------------------GATTCATAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................CACGACAAACGCTATTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00600060
................................GACAAACGCTATTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400130
..........CTCTGGATTCGATCGCCTTCACGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300120
..GGCAAAGTCTCTGGATTCGATCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300030
............................TCACGACAAACGCTATTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110
................ATTCGATCGCCTTCACGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
...............................CGACAAACGCTATTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCAAAAAAAAAAGGAAGG.............................................................2111.00101000
.......................................................................................................................................................................................................................................................................................ATTTTT--GCCAAAAGGGTGGG.....................................................................................................................................................................................................................................................................2011.00100010
....CAAAGTCTCTGGATTCGATCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAAGCAAAGGCAAATGTAGA-T-T...........................................................................................................2611.00100010
.....AAAGTCTCTGGATTCGATCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...........................................................................................................................................................................................................................................................................................................GGTTTT-T--------------TTCGG-TT-----GTTGTTGC............................................................................................................................................................................................................................2211.00100001
........GTCTCTGGATTCGATCGCCTTCACGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
..............GGATTCGATCGCCTTCACGACAAACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..........CTCTGGATTCGATCGCCTTCACGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
...............GATTCGATCGCCTTCACGACAAACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.......AGTCTCTGGATTCGATCGCCTTCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............GATTCGATCGCCTTCACGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........GTCTCTGGATTCGATCGCCTTCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........GTCTCTGGATTCGATCGCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................CTTCACGACAAACGCTATTCAAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................ACGACAAACGCTATTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----AAT-CCTAGTTGATAGCAAAA.........................................................................2211.00100010
TTGGCAAAGTCTCTGGATTCGATCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................................................................................................................................................................GGA-CACACACACACAGACAC.......................................................................................................................................................................................................................................................................................................................................................2090.11101000
...............................................................................................................................................................................................................ACACACAGACACACTCACACA..............................................................................................................................................................................................................................................................................................................................................21130.08101000
droVir3
TCGGCAACGTCTCTGGACTCGAGCGCCTGCAAAACAAACGCTACAACAAGGTAAGTTAG-AAGA--AG---------AAACCGCT---------------------------------------------------------------T----GCTACCCA--TAC--------------------------------------------------------------------------------GTTGG--AA-TAGCGGAAAAGTACCAGC-ATAGAGCACACAACAGACAGAACGGGGTTG-T--------------TTCGG-AT-----ATACA----TATATATGTATGTATTTGTAGATATGTATA---------TA--CTAGAAACACACACACAAACACACTCCAAACGCCGCAT-------------------------------------TAGCAAC-----------------------------------------------------------------------------------ATGTTAGACTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.CGGCAACGTCTCTGGACTCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003000100000000000000000000000000000000000000000000000000000020000
.....AACGTCTCTGGACTCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003001000000110000000000000000000000000000000000000000000000000000
......ACGTCTCTGGACTCGAGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000002000000000000000000000000000000000000000000000000
........GTCTCTGGACTCGAGCGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000010000100000000000000000000000000000000000000000
....CAACGTCTCTGGACTCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........GTCTCTGGACTCGAGCGCCTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
..GGCAACGTCTCTGGACTCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..GGCAACGTCTCTGGACTCGAGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................CGAGCGCCTGCAAAACAAACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
.....AACGTCTCTGGACTCGAGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.................CTCGAGCGCCTGCAAAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
...........TCTGGACTCGAGCGCCTGCAAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AGACAGAACGGGGTTG-T--------------TTCGG-AT-----....................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...........TCTGGACTCGAGCGCCTGCAAAACAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
..............................AAAACAAACGCTACAACAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.CGGCAACGTCTCTGGACTCGAGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
............CTGGACTCGAGCGCCTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......ACGTCTCTGGACTCGAGCGCCTGCAAAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000100000
..GGCAACGTCTCTGGACTCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................CGAGCGCCTGCAAAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
........GTCTCTGGACTCGAGCGCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................CGCCTGCAAAACAAACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..GGCAACGTCTCTGGACTCGAGCGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACACTCCAAACGCCG.............................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
...........................TGCAAAACAAACGCTACAACAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
..GGCAACGTCTCTGGACTCGAGCGCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
droMoj3
TCGGCAGTGTCTCTGGACTCGATCGCATGAACCTAAAGCGCTACAATAAGGTGAGTTTA-AAGA--------------------------------------------------------------------------------AAGCCGCAAGCTGCCCA--TAC--------------------------------------------------------------------------------GCGGG--AA-TAGTGGAAAAGTACCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.CGGCAGTGTCTCTGGACTCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............GGACTCGATCGCATGAACCTAAAGCGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
droGri2
CGGGTAATCTATCGGGACTCGATCGTCTGTACAACAAACGCTTCAGCAAGGTAAGTTCT-AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............GGGACTCGATCGTCTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
....................GATCGTCTGTACAACAAACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 06:32 PM