ID:

dsi_7273

 Coordinate:

2r:20879699-20879848 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.4 -9.4 -9.4 -9.3

Flybase annnotation

exon [2r_20877384_20879698_-]; CDS [2r_20877384_20879698_-]; intron [2r_20879699_20881038_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTTCGGGAAATCGTATGGAATACGGTTATTGACCTGAAAGAATCTTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGTAAATTAATCGGATAAACAGACATCACTTGAACTCTCCAGTTTTTAAATATAGATCTCCTTATCTTACTAACTACGTACTATTTATCTTACTTAACATAATTTTCAATATTTTTTACAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA
**************************************************............(((...........(((((..(((((...(((((((.((((.....................................................)).)).))))))).........)))))..))))).......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 M053
female body
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
..........................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAGT..................... 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................TGCAGTTCGGTGAACGTCACAGATGA. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTTGCGCATGCAGTTCGGTG............... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.............TATGGAATACGGTTATTGACCTGAA.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAATCGAACTGTTGCGCATGCA....................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...............................................................................................AAACAGACATCACTTGAACTCTCCA.................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTCACAGATG.. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAGG..................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CTTTCTTAAATCGAACTGTTGCGCATGC........................ 28 2 1 1.00 1 0 0 0 0 0 0 1 0 0
...................................................................................AATTAATCGGATAAACAGA.................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTTGCGCATGCAGTTCGGTGAACGTC......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............ATGGAATAGGGTTATGGCCCT....................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0
.................GAATACGGTTGTTGGCCT....................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1
.......................................................................................................ATCACCTGAACTTTCCAGCT............................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 1
....GGGAAATCGTATCGA....................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....CGAAGTCGTATGGAAGAC................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CAAGCCCTTTAGCATACCTTATGCCAATAACTGGACTTTCTTAGAAAACACTCTTATAATGTAACAAAATAAAGAAACAACATTTAATTAGCCTATTTGTCTGTAGTGAACTTGAGAGGTCAAAAATTTATATCTAGAGGAATAGAATGATTGATGCATGATAAATAGAATGAATTGTATTAAAAGTTATAAAAAATGTCAAGAATTTAGCTTGACAACGCGTACGTCAAGCCACTTGCAGTGTCTACTT
**************************************************............(((...........(((((..(((((...(((((((.((((.....................................................)).)).))))))).........)))))..))))).......)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
........................................................................................................AGTGAGCTTGAGAAGTCAAAAT............................................................................................................................ 22 3 2 0.50 1 1 0
.........................................................................................................................................................................ATGAATTGTATTGAAAG................................................................ 17 1 3 0.33 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20879649-20879898 - dsi_7273 GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATACGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AAATTAATCGGATAAACAGACAT------CACTTGAACTCT-CCAGTTTTTAAATATAGATCTCCT----------TATCTTACTAACTACG-------------------------------------------TAC----TATTTATC--------------------------------------------------------------TTACTTAACATAATT-TTCAAT--ATTTTTTACAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---
droSec2 scaffold_23:273327-273575 - GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATACGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AATTTAATCGGATAAACAGACAT------CACTTGAACTTT-CCAGTTTTTAAATATAGATATACT----------TA-CTTACTAACTTCG-------------------------------------------TAC----TATTTATC--------------------------------------------------------------TTACTTAACATCATT-TTCAAT--ATTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---
dm3 chr2R:20400645-20400896 - GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATCAGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AATTTAATCGGATATACAGAAAT------CACTTGAACTTT-CCAGTTTTTAAATATAGCTATACT----------TATCTTACTAACTTCG-------------------------------------------TAT----TATTTTTC--------------------------------------------------------------TTACTTAACATATTT-TTCAATATTTTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---
droEre2 scaffold_4845:21768000-21768207 - TGGCAA-------------------------------------------------------------TCA--------------C------------------------------------------------ATGGAACCGGGTTATCAACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTGTGGGAATACT--ATTGTTCGGTTTCCTT------------------------------------------------------------------------------------------------------------------------------CTCTGCCAGTTTTTAAATACAGCTATACT----------TATCTTACTG----C--------------------------------------------TACTATGTACTTATC--------------------------------------------------------------TTACTAACGGCCTTT-TTCAAA--TCTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGCTCGGTGAACTTTACAGATGAA---
droYak3 2R:20369327-20369578 - TTTCGGGAA---------------------------------------------------------ATCA--------------T------------------------------------------------ATGGAATCAGGTTGATGACCTAAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTGTGGGAATATTATATTGTCTTATATCTTTGTTGT------------------------------------------------------------------------------------GTATTAAAATGAAATACAGACATACATAATACTTGAGCACTGCCTGCTTTTAAATACAGATATACT----------TATCTTACTT----C--------------------------------------------TAC----TATCTATC--------------------------------------------------------------TTACTAACTGCCTCT-TTCAAT--GCCTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGCTCGGTGAACTTCACAGATGAA---
droEug1 scf7180000409464:762543-762716 - TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCCGTCATCTGAGTG---T------------TGCTATAGATTAGGTTCATTGACTTT------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATCCGTCCTAGAAATCTTTTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGATTC----------------------------CTACTAAGCATAGTT-TT------TCCTTTTGCAGATCTCAAATCTAGTTGCTGCGCCTGTAGCTCGACTAACTTCACAGATGAG---
droBia1 scf7180000301754:3515098-3515430 + TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCCGTCACACAGTTG---TTACTTACATATGTACTATAGAATCAGTTCATTGAACTGGAAGATG---CATTCTTTAAAC------------AA---------TTAAGCAAAACAAATTCTTTGAAACATTTGTTCTTTCTTTAGGATTATCAGGGAATTGTTCTCTTAGGATGATGCTACAATACAAGGATGAACCCTCTGAAGAATTCA-CGGTCAAGGGGACTTATT-------------------------TTATGAGCCT------------------------------------------------------------------------------------ACAATAATCAGAGA-------------------------------------------------------------------------------------------------------------------------TCC----AATTTTTC--------------------------------------------------------------ATACTAACCACAGTTTTTCCTA--CTCTTTTACAGATATAAAATCGAGCTATTGCGCATGTAGTTCGACCAACTTCACAGATGGA---
droTak1 scf7180000415376:404074-404420 - TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTTCAT-ATACGACTGA--TTC-----ATATTTACTATAGTATCAGTTCACTGAACTGGAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTGTGTG--------------------CTTTTAAATGAATTTTACACAGAAAAAACATCAAAAAAGAGAAATCCTCAAGAATTCGCGGGTATTAAATGATCGATTTTAACCGAAACACTCATAA----------------------GAA---------TAG-TAGATTTTTA------------------------------AATAGCCGCGAATTCTTCAGATT-----GTGTGGACTATTCTTAACTTAACTATATTGCATTTTCATT---------------------------------A-----TATTAAATCTAAATTAAAATCCCATACTA------------------ATCTTTCACAGACCTAAAATCGAGCTGCTGCGCGTGTAGCTCGACCAACTTCACAGATGGA---
droEle1 scf7180000491214:4604908-4605166 + TTTCGGAAA---------------------------------------------------------AGTC---------------------------TTTTGTCACACGAACG---TTA--------TTGACTATAGATTCAGTTCATTGGCCTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGCTTTTGTGCTTTGTTATGG----------------------------------------------------------------------------------AATT----------------------------------TTT-CCAGGGTTTACCTACAAATCTATTAAGAGTTTGTTA-CTTACAAACTA----------------------------------------------------TGTTTATCGTATTAAATGTATAAAACACTTGGAAATGTATTA-----------------------------TAATAAACCCAAA--TTCA----ACCTTTTGCAGATCTCAAATCCAGCTGCTGTGCCTGCAGCTCGGCTAACTTCACAGATTGC---
droRho1 scf7180000776849:81447-81748 - TTTCGGAAA---------------------------------------------------------AACC---------------------------TTTTGTCATATGAACG---TTC--------ATGACTATAGATTCAGTTCATTGACTTAAACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTTGTAAG--------------------CTTTGTTATGT----------------------------------------------------------------------------------GGAT----------------------------------TTG-TAAGGTTTTAC----------------------------TAATAACTACGAATTATTAAGTTTTATAAATGTGATAT-TTTTTATTTTAATTGTGTTCTGATTTAAAC---------------ATTTTTCT--ACTCGTTTTCTTTTAAGCATATTAAAATATTTAATTCATATTAATCAACCTATTTTCAA--CCTTTTTGCAGATCTAAAATCGAGCTGCTGTGCATGCAGCTCGGCTAACTTCACAGATGAA---
droFic1 scf7180000453342:254971-255143 - GTTTCGGAA--------------------------------------------------------AA-CG--------------C------------ATTCGTCATTC-------------------GTTGCTATAGAATGAGTTTGTTGAACTGGAAGATGATTTTACTTTTGCAA---------------------------------------------------------------------------------------------------------------------------------------------AGAATCAATTGTGATTA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTATTCTAATCC----TCC------------------------------------------------------------------------------------------TCCA-----ATCTTTCCAGATCTCAAGTCGAGCTGCTGTGCGTGTAGCTCGGCTAACTTCACAGATGAC---
droKik1 scf7180000302277:775714-775936 + TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCAGGTTGTGGGGGG-TATTA--------TTTACTGTGTATTTAGTTCATTGACCTGAAGAATG---TAATCTTTATAA------------AAGAATATTCGTCCA-----------------------------------------------------------------------------ATA-----AAACGTTAT-TCCATTTCAAAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAACCCCTCACTGATCTTCATTTCTCCAA--ACCAATTTCAGATCTCAAATCGAGTTGTTGCGCCTGCAGCTCGATCAACTCTACAGATGAC---
droAna3 scaffold_13266:15943899-15943969 - TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TATTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTTCAGATCTCAAATCCAATTGTTGTGCCTGCAGCTCCGCAAACCTCACAAATGGT---
droBip1 scf7180000396567:434310-434496 - CGGCTGTTG---------------------------------------------------------AACTTTTTTTTATTTTCCCCCAGAAGAAAGGAAACGTGT----------TTTG--------CTTTCTACAGATAAGGATCGTTGATCCCGGGACT-----------TACAAAGATTTTCCTGATAGAAAACTCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------TAATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-----AACTCTTTCAGATGTCAAATCCAACTGTTGTGCCTGCAGCTCCGCACTCTTCACAAATGGC---
dp5 3:18267321-18267571 + GTTCGAGATTATTGAACTGTTTTGTTCCGTTATATATTTATTTTTCGCTTTGGGGGACTTTGGAAA-----------------------AGGTGAAGAAACGTGA----------TTCG--------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGGACGAACGTTTTTTTCGTTTCATTGCTCTGGGAGATTCCTTTGTGACAA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTGCTTAAATCA----TCC----ATTATATT--------------------------------------------------------------TTACTTACCATAATT-TTCG-----ACATTTGCAGATCTCAGAACGAGCTGTTGTGCCTGTTGCACCGCTGACCACACTAATGCGGCA
droPer2 scaffold_34:212612-212861 + GTTCGAGATTATTGAACTGTTTTGTTCCGTTATATATTTATTTTTCGCTTTGGGGGACTTTGGAAA-----------------------AGGTGAAGAAACGTGA----------TTCG--------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGGACGAACGTTTT-TTCGTTTCATTGCTCTGGGAGATTCCTTTGTGACAA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTGCTTAAATCA----TCC----ATTATATT--------------------------------------------------------------TTACTTACCATAATT-TTCG-----ACATTTGCAGATCTCAGAACGAGCTGTTGTGCCTGTTGCACCACTGACCACACTAATGCGGCA
droWil2 scf2_1100000004512:2096871-2096955 + TATTTAAAG---------------------------------------------------------CATT---------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTAAAACTTCTTTTACAGATCTTAGAACGTATTGCCGAGCCTGCAGTTCGACCAAGTACACAGATCAC---
droVir3 scaffold_12875:7582119-7582188 - TTTTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCC----TTACCTTGCAGATCTTAGAACGAATTATTATGCATACAGTGCAACGA---CAAAAGGCCAG---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATACGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AAATTAATCGGATAAACAGACAT------CACTTGAACTCT-CCAGTTTTTAAATATAGATCTCCT----------TATCTTACTAACTACG-------------------------------------------TAC----TATTTATC--------------------------------------------------------------TTACTTAACATAATT-TTCAAT--ATTTTTTACAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAGT........................2712.00201100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTCGGTGAACGTCACAGATGA....2611.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCGCATGCAGTTCGGTG..................2111.00110000000000000000
....................................................................................T------------------------------------------------ATGGAATACGGTTATTGACCTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGAACTGTTGCGCATGCA..........................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGACAT------CACTTGAACTCT-CCA...............................................................................................................................................................................................................................................................2511.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTCACAGATG.....2611.00100000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAGG........................2711.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAATCGGATAAACAGA........................................................................................................................................................................................................................................................................................1911.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCGCATGCAGTTCGGTGAACGTC............2711.00100000000010000000
droSec2
GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATACGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AATTTAATCGGATAAACAGACAT------CACTTGAACTTT-CCAGTTTTTAAATATAGATATACT----------TA-CTTACTAACTTCG-------------------------------------------TAC----TATTTATC--------------------------------------------------------------TTACTTAACATCATT-TTCAAT--ATTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGCATGCAGTTCGGT...................1913.0030030
GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAGT........................2711.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGCAGTTCGGTGAACGTCA...........2311.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGCATGCAGTTCGGTGAAC...............2311.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCGCATGCAGTTCGGT...................2011.0010010
dm3
GTTCGGGAA---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATCAGGTTATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGTGAGAATATTACATTGTTTTATTTCTTTGTTGT------------------------------------------------------------------------------------AATTTAATCGGATATACAGAAAT------CACTTGAACTTT-CCAGTTTTTAAATATAGCTATACT----------TATCTTACTAACTTCG-------------------------------------------TAT----TATTTTTC--------------------------------------------------------------TTACTTAACATATTT-TTCAATATTTTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGTTCGGTGAACGTCACAGATGAA---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCAGTTCGGTGAACGTCACAGATGA....2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTCAC..........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATCGAACTGTTGCGCATGCAGT........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATGCAGTTCGGTGAACGTCACAGA.......2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATCGGATATACAGAAAT------...............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTGTTGCGCATGCAGTTCGGT...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTCACAG........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTCGGTGAACGTCACAGATGA....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGAACGTCACAGATGA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCAG.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAAATCGAACTGTTGC.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGCATGCAGTTCGGT...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCAGTTCGGTGAACGTCACAGAT......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGCATGCAGTTCGGTGA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATGCA..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATGCAGTTCGGTGAA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAAATCGAACTGTTGCGCATGCAG.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCGGTGAACGTCAC..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCAGTTCGGTGAAC...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTAAATCGAACTGTTGCGCA..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTC............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTGTTGCGCATGCAGTT.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ATTGACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGCAGTTCGGTGAACGTC............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCATG............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACTGTTGCGCATGCAG.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTGTGAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTCGGTGAACGTCACAGAT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTCGGTGAACGTCACAGATGAA---2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGTTCGGTGAACGTCACA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........A---------------------------------------------------------ATCG--------------T------------------------------------------------ATGGAATCAGGTTATTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCAGTTCGGTGACG...............1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGCAA-------------------------------------------------------------TCA--------------C------------------------------------------------ATGGAACCGGGTTATCAACCTGAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTGTGGGAATACT--ATTGTTCGGTTTCCTT------------------------------------------------------------------------------------------------------------------------------CTCTGCCAGTTTTTAAATACAGCTATACT----------TATCTTACTG----C--------------------------------------------TACTATGTACTTATC--------------------------------------------------------------TTACTAACGGCCTTT-TTCAAA--TCTTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGCTCGGTGAACTTTACAGATGAA---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATCGAACTGTTGCGCATGC...........................2311.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCGGTGAACTTTACA.........2011.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTTGCGCATGCAGCTCGGT...................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTGTTGCGCATGCAGC........................2011.0010100000
droYak3
TTTCGGGAA---------------------------------------------------------ATCA--------------T------------------------------------------------ATGGAATCAGGTTGATGACCTAAAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTGTGGGAATATTATATTGTCTTATATCTTTGTTGT------------------------------------------------------------------------------------GTATTAAAATGAAATACAGACATACATAATACTTGAGCACTGCCTGCTTTTAAATACAGATATACT----------TATCTTACTT----C--------------------------------------------TAC----TATCTATC--------------------------------------------------------------TTACTAACTGCCTCT-TTCAAT--GCCTTTTGCAGTTCTTAAATCGAACTGTTGCGCATGCAGCTCGGTGAACTTCACAGATGAA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGAACTGTTGCGCATGCAGCT.......................2611.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCGAACTGTTGCGCA..............................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGCGCATGCAGCTCGGT...................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATGCAGCTCGGTG..................1811.00101000000000
droEug1
TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCCGTCATCTGAGTG---T------------TGCTATAGATTAGGTTCATTGACTTT------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATCCGTCCTAGAAATCTTTTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGATTC----------------------------CTACTAAGCATAGTT-TT------TCCTTTTGCAGATCTCAAATCTAGTTGCTGCGCCTGTAGCTCGACTAACTTCACAGATGAG---SizeHit CountTotal NormTotal
No Reads
droBia1
TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCCGTCACACAGTTG---TTACTTACATATGTACTATAGAATCAGTTCATTGAACTGGAAGATG---CATTCTTTAAAC------------AA---------TTAAGCAAAACAAATTCTTTGAAACATTTGTTCTTTCTTTAGGATTATCAGGGAATTGTTCTCTTAGGATGATGCTACAATACAAGGATGAACCCTCTGAAGAATTCA-CGGTCAAGGGGACTTATT-------------------------TTATGAGCCT------------------------------------------------------------------------------------ACAATAATCAGAGA-------------------------------------------------------------------------------------------------------------------------TCC----AATTTTTC--------------------------------------------------------------ATACTAACCACAGTTTTTCCTA--CTCTTTTACAGATATAAAATCGAGCTATTGCGCATGTAGTTCGACCAACTTCACAGATGGA---SizeHit CountTotal NormTotal
No Reads
droTak1
TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTTCAT-ATACGACTGA--TTC-----ATATTTACTATAGTATCAGTTCACTGAACTGGAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTGTGTG--------------------CTTTTAAATGAATTTTACACAGAAAAAACATCAAAAAAGAGAAATCCTCAAGAATTCGCGGGTATTAAATGATCGATTTTAACCGAAACACTCATAA----------------------GAA---------TAG-TAGATTTTTA------------------------------AATAGCCGCGAATTCTTCAGATT-----GTGTGGACTATTCTTAACTTAACTATATTGCATTTTCATT---------------------------------A-----TATTAAATCTAAATTAAAATCCCATACTA------------------ATCTTTCACAGACCTAAAATCGAGCTGCTGCGCGTGTAGCTCGACCAACTTCACAGATGGA---SizeHit CountTotal NormTotal
No Reads
droEle1
TTTCGGAAA---------------------------------------------------------AGTC---------------------------TTTTGTCACACGAACG---TTA--------TTGACTATAGATTCAGTTCATTGGCCTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGCTTTTGTGCTTTGTTATGG----------------------------------------------------------------------------------AATT----------------------------------TTT-CCAGGGTTTACCTACAAATCTATTAAGAGTTTGTTA-CTTACAAACTA----------------------------------------------------TGTTTATCGTATTAAATGTATAAAACACTTGGAAATGTATTA-----------------------------TAATAAACCCAAA--TTCA----ACCTTTTGCAGATCTCAAATCCAGCTGCTGTGCCTGCAGCTCGGCTAACTTCACAGATTGC---SizeHit CountTotal NormTotal
No Reads
droRho1
TTTCGGAAA---------------------------------------------------------AACC---------------------------TTTTGTCATATGAACG---TTC--------ATGACTATAGATTCAGTTCATTGACTTAAACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTTTGTAAG--------------------CTTTGTTATGT----------------------------------------------------------------------------------GGAT----------------------------------TTG-TAAGGTTTTAC----------------------------TAATAACTACGAATTATTAAGTTTTATAAATGTGATAT-TTTTTATTTTAATTGTGTTCTGATTTAAAC---------------ATTTTTCT--ACTCGTTTTCTTTTAAGCATATTAAAATATTTAATTCATATTAATCAACCTATTTTCAA--CCTTTTTGCAGATCTAAAATCGAGCTGCTGTGCATGCAGCTCGGCTAACTTCACAGATGAA---SizeHit CountTotal NormTotal
No Reads
droFic1
GTTTCGGAA--------------------------------------------------------AA-CG--------------C------------ATTCGTCATTC-------------------GTTGCTATAGAATGAGTTTGTTGAACTGGAAGATGATTTTACTTTTGCAA---------------------------------------------------------------------------------------------------------------------------------------------AGAATCAATTGTGATTA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTATTCTAATCC----TCC------------------------------------------------------------------------------------------TCCA-----ATCTTTCCAGATCTCAAGTCGAGCTGCTGTGCGTGTAGCTCGGCTAACTTCACAGATGAC---SizeHit CountTotal NormTotal
No Reads
droKik1
TTTCGGAAA---------------------------------------------------------AGCC---------------------------TTCAGGTTGTGGGGGG-TATTA--------TTTACTGTGTATTTAGTTCATTGACCTGAAGAATG---TAATCTTTATAA------------AAGAATATTCGTCCA-----------------------------------------------------------------------------ATA-----AAACGTTAT-TCCATTTCAAAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAACCCCTCACTGATCTTCATTTCTCCAA--ACCAATTTCAGATCTCAAATCGAGTTGTTGCGCCTGCAGCTCGATCAACTCTACAGATGAC---SizeHit CountTotal NormTotal
No Reads
droAna3
TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TATTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTCTTTCAGATCTCAAATCCAATTGTTGTGCCTGCAGCTCCGCAAACCTCACAAATGGT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAATTGTTGTGCCTGCAGCTCCGC...................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGTTGTGCCTGCAGCTCCGCAA.................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGCCTGCAGCTCCGCAAACC..............2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGCCTGCAGCTCCGC...................1911.001010000
droBip1
CGGCTGTTG---------------------------------------------------------AACTTTTTTTTATTTTCCCCCAGAAGAAAGGAAACGTGT----------TTTG--------CTTTCTACAGATAAGGATCGTTGATCCCGGGACT-----------TACAAAGATTTTCCTGATAGAAAACTCGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------TAATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-----AACTCTTTCAGATGTCAAATCCAACTGTTGTGCCTGCAGCTCCGCACTCTTCACAAATGGC---SizeHit CountTotal NormTotal
No Reads
dp5
GTTCGAGATTATTGAACTGTTTTGTTCCGTTATATATTTATTTTTCGCTTTGGGGGACTTTGGAAA-----------------------AGGTGAAGAAACGTGA----------TTCG--------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGGACGAACGTTTTTTTCGTTTCATTGCTCTGGGAGATTCCTTTGTGACAA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTGCTTAAATCA----TCC----ATTATATT--------------------------------------------------------------TTACTTACCATAATT-TTCG-----ACATTTGCAGATCTCAGAACGAGCTGTTGTGCCTGTTGCACCGCTGACCACACTAATGCGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACCGCTGACCACACTAATGCGG..2612.0020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGAGCTGTTGTGCCTGTT..........................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTTGTGCCTGTTGCACCGCTGACC..............2811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCAGAACGAGCTGTTG..................................2011.0010100000000
droPer2
GTTCGAGATTATTGAACTGTTTTGTTCCGTTATATATTTATTTTTCGCTTTGGGGGACTTTGGAAA-----------------------AGGTGAAGAAACGTGA----------TTCG--------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGGACGAACGTTTT-TTCGTTTCATTGCTCTGGGAGATTCCTTTGTGACAA----------------------------------------------------------------------------------------------------------------CT--------------------------------------------------------------------------------------------------------------------TTGCTTAAATCA----TCC----ATTATATT--------------------------------------------------------------TTACTTACCATAATT-TTCG-----ACATTTGCAGATCTCAGAACGAGCTGTTGTGCCTGTTGCACCACTGACCACACTAATGCGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TATTTAAAG---------------------------------------------------------CATT---------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTTAAAACTTCTTTTACAGATCTTAGAACGTATTGCCGAGCCTGCAGTTCGACCAAGTACACAGATCAC---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGACCAAGTACACAGATCAC---2511.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCAAGTACACAGATCAC---2111.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTATTGCCGAGCCTGCA..........................1911.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGAGCCTGCAGTTCGAC...................2211.00100010
droVir3
TTTTATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCC----TTACCTTGCAGATCTTAGAACGAATTATTATGCATACAGTGCAACGA---CAAAAGGCCAG---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTATGCATACAGTG.......................1811.001000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAACGAATTATTATGCATACAGTGC......................2711.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGTGCAACGA---CAAAAG........2011.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACAGTGCAACGA---CAAAAGG.......2211.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGAACGAATTATTATGCATACAGT........................2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGAATTATTATGCATACAGTGC......................2611.001001000000000000000000000000000000000000000000000000000000000000

Generated: 05/18/2015 at 09:38 AM