ID:

dsi_7270

 Coordinate:

3l:12699858-12700041 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-46.0 -45.9 -45.8

Flybase annnotation

CDS [3l_12699855_12699857_+]; five_prime_UTR [3l_12699750_12699854_+]; CDS [3l_12700042_12700203_+]; exon [3l_12700042_12700203_+]; exon [3l_12699750_12699857_+]; intron [3l_12699858_12700041_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTCATTAACTTTTATCAAGCGCTCCAGTTTGCATTTAAGAATTAAAATGGTGAGTTAAAAGTGCATTGCCCCATATGCGGTTTAGAAGACAGTTTGAAATCGAAGGATGATGTCGGTTCTTCGAGAAGGTTCCACGGCTTTCGGCCCACATCCCATTCGCCGGGCTGTTGTGTAATCAATAGGAAAAACATGAAACATGGGTTAATTGTTGGGGCTTTTTTAATGATCCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCA
**************************************************.((((.............((((((...((((((.................(((((((((.......)))))))))(((((((....)))))))((((((...(((.......)))((((((......))))))...............)))))))))))))))))).............)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR902009
testis
..................................................................................................................................................................................................................................................TATCAAGAAGATCATCCCCATGCTGGAC.............. 28 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
........................................................................................................AGGATGATGTCGGTTCTTCGAG.............................................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................TTTAGAAGACAGTTTGAAATC...................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTTTAATGATCCTCAGGC................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACCGC........... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTTAATGATCCTCAGGCC............................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTG................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGAC.............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................ATCAAGAAGATCATCCCCATGCTGGACC............. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................GCGCTCCAGTTTGCATTTAAGA................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCTGGAC.............. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCT.................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................TGGCCGCTGCTATCAAGAAGATCATCC......................... 27 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGGCCGCCGCTATCAAGAAGATCAA........................... 25 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................TGGCCGCTGCTATCAAGAAGATCATCCC........................ 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................CCAGTTTGCATTTAAGA................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGACC............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTG................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TTGAACTCGAAGGATGACGTGG........................................................................................................................................................................ 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
....................................TAAGAAGTAATATGTTGAGTT................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................CCGAGCTGTCGTGTCATCA......................................................................................................... 19 3 11 0.18 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................GATGTCGGTTCTTCC................................................................................................................................................................ 15 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................TGATGCCGGATCTTCGA............................................................................................................................................................... 17 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................TGCGAGAAGGTTCCATG................................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................AGTAGGTCATCCCCAGGCT.................. 19 3 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0
....................................TAAGAAGTAATATGTTGAGT.................................................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................GGTTGATGTCGGCTCTT.................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................AAATTGTTAGGGCTTTTTT.............................................................. 19 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1
.....................................AAGAAGTAATATGTTGAGTT................................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................CAGGATGTTGTCGGTTC.................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................TGATGTCGGATCTTCC................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................TGATGTCGGCTCATCG................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GCTGGACTGCATCCT...... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................CCGTGCTGGACTGCATC........ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................CGGCCTGTTGTGTAGT........................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................CCCGGGTTTCGGCCCA....................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGAGTAATTGAAAATAGTTCGCGAGGTCAAACGTAAATTCTTAATTTTACCACTCAATTTTCACGTAACGGGGTATACGCCAAATCTTCTGTCAAACTTTAGCTTCCTACTACAGCCAAGAAGCTCTTCCAAGGTGCCGAAAGCCGGGTGTAGGGTAAGCGGCCCGACAACACATTAGTTATCCTTTTTGTACTTTGTACCCAATTAACAACCCCGAAAAAATTACTAGGAGTCCGGCGGCGATAGTTCTTCTAGTAGGGGTACGACCTGGCGTAGGATTAGGT
**************************************************.((((.............((((((...((((((.................(((((((((.......)))))))))(((((((....)))))))((((((...(((.......)))((((((......))))))...............)))))))))))))))))).............)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.................................................................................................................................................................................................................................................................GGGTTACGACCTAGCGAAGGAT..... 22 3 1 1.00 1 0 1 0 0
.............................................................................................................................................................................................................................ATTACTAGGAGTCCG................................................ 15 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................AAAAAATTACTAGGGGT................................................... 17 1 2 0.50 1 0 0 1 0
.......................................................................................................................................GCCGAAAGCCGGGTGTTA................................................................................................................................... 18 2 9 0.11 1 1 0 0 0
..........................................................................................................................................................................................................................AAAATTACTAGGAGGGCGTC.............................................. 20 3 10 0.10 1 1 0 0 0
.....................................................................................................................GAGAAGGTCTTCCAAGGTGT................................................................................................................................................... 20 3 10 0.10 1 0 0 1 0
........................................................................................................................................................................................................................AAGAAATTACTAGGA..................................................... 15 1 13 0.08 1 0 0 1 0
........................................................................................................................................................................................................................AAAAAATTACTAGGAA.................................................... 16 1 18 0.06 1 0 0 1 0
............................................................................................................................................................TAGCAGCCTGACAACACA.............................................................................................................. 18 3 20 0.05 1 0 0 0 1
.............................................................................................................................................................ATCGGCCCGACAACCCA.............................................................................................................. 17 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:12699808-12700091 + dsi_7270 ACTC------A----TTAACTT-------TT--ATCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GC-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATGT-CGGTTCTTCGAGAAGGTTCCACGGCTT------TC-GGCCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------AGGAAAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCA
droSec2 scaffold_0:5180871-5181154 + ACTC------A----TTAACTT-------TT--ATCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GC-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATGT-CGGTCTTTCGAGAAGGTTCCACGGCTT------TC-GGCCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAAAAACATGA-----------AC-------CATGGGTTAAT-TG--------TTGG--GCC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCA
dm3 chr3L:13009215-13009506 + ACTC------A----TTAACTT-------TT--ATCAACCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTAAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GA-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATAT-CGGTTTTTCGAGAAGGTTCCACGGCTT------TC-GGTCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGAAACATTGA---AA-------CATGGGTTAAT-TG--------TTGG--GTC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCA
droEre2 scaffold_4784:13016569-13016850 + ACTC------A----TTAACTT-------TT--CTCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGTCC------------------------------------------CATAA--GC-------CATTTA------------GAAGAAAG--TTGGAAATCGAAG--------GGAGGG-CGGTTCTTCGAGAAGGTTCCACAACTT------TC-GGCCCAGCTCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTATTT------AA----------TGAT------CTCCAGGCCGCCGCTATCAAGAAGATCATACCCATGCTGGACCGCATCCTGATCCA
droYak3 3L:13087820-13088101 + ACTC------A----TTAACTT-------TT--CTCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTAAAAAG---------TGCA------------TGGTCC------------------------------------------CAAAT--GC-------CATTAA------------GAAAAAGG--TTGGAAATCGAAG--------GGAGCT-GCGTTCTTCGAGAAGGTTCCAAATCTT------TC-GGCCCACCTCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTATTT------AA----------TGAT------CCCCAGGCCGCCGCTATCAAGAAGATCATACCCATGCTGGACCGCATCCTGATCCA
droEug1 scf7180000409711:6096696-6096991 + AATC------T----TTAACTT-------TT--TCCGAGCGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTGAGTTAAGAA---------TGTA------------AGGCTT------------------------------------------AGAAA--GT-------CATTCA------------AACG-AAG--TTGGAGATCTCT--C------GGATGCACGGTTGTTCGAGAAGGTTCCACAACTTACTATCGGTGGTCCACCTCTCTCT---CTTACCGG------GCTG--------TTGTGTAATC-------------------------AGTGACAG-----------AAACGAAACATGA-----------AA-------CATGGAATAAT-TG--------TTGG--GTC-----TTATTT------AA----------TGCT------CTTTAGGCCGCAGCTATCAAGAAGATCATCCCCATGCTGGATCGCATCCTGATCCA
droBia1 scf7180000302193:2249148-2249437 + ACT-------------TGACTT-------TT--TCCAAGCGCTCCAGT-TTGCATTTAAGAACTCAAGAACAAAAATGGTGAGTTAATGT---------TGTG------------TTGCCC------------------------------------------AGCAT--GC-------CT--CAAA----------AAAAAGAG--CCGAGGATCGCT--A------TGACCC-TCGACTTTCCAGAAGGTTCCACAGCTT------GCGGGACCTGCTCTCC-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AGT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-GG--------TGTATTTGC-----TTCTCT------GA----------TTCC------ATCCAGTCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCA
droTak1 scf7180000415706:60760-61041 + ACTC------T----CAAACTT-------TT--CACAAGCGCTCCAGT-TTGCATTTAAGAAC--------TAAAATGGTGAGTTAAGAC---------TGTG------------TTGCTT------------------------------------------AGCA---GT-------GAATAG------------AACA-GAGATTTGGAAATCGGAG--CG----GTGTCT-ACGATTTTCGAGAATATTCCACGAAG----------ATTCCACCTCTCT-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAGCACGA-----------AA-------CATGGGTTAAT-CG--------TTGG--GGCC----TCACTC------AA----------TGCT------TCGCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATTCTGATCCA
droEle1 scf7180000491255:1407147-1407435 + ACTC------T----TTAACTT-------TT--CACAAACGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTGAGTTAAGAG---------ATGA------------TTACAT------------------------------------------AAAAA--GC-------CAATCA------------AACG-GAG--------ATCAAAA--CCATTTGGGA-TACTGTTTTTCGGGAAGCTTCCAGAACTC------GGGTGTCCATCTCTCTCTCTCGTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGGGGGGC-----TTATTT------TA----------TGCT------TTCCAGTCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCA
droRho1 scf7180000769476:7127-7411 - ACTC------T----TAAACTT-------TT--ATCAAACGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTAAGTTAATTG---------TATA------------TTACTT------------------------------------------AAGAA--GC-------CATTGA------------AACG-GAG--ATGGAAATCAAC--T------GGGAGT-ACGTTTTTCAAGAAGCTTCCAGAACTC------GG-GGTCCATCTCTCTTT---TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGGGGGGC-----TTATTT------CG----------TGCT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCA
droFic1 scf7180000454048:728744-729031 - ATTC------T----TTAGATT-------CT--CTCAAGCTCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTAAGTTAAAAG---------TGAC------------CTAATA------------------------------------------ACGAT--GC-------CT--TAATA---------AATG-TAA--ATGGAAATCGGG--TT------TGTGT-GAGTAATTCGAGAAGCTTCCACAACTC------TGGGGTCCATCTCTCT-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATAA-----------AA-------CATGGGTTAAT-GG--------TTGG--GTGTTCATTTATCT------TA----------TATC------TTTAAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATTCTGATCCA
droKik1 scf7180000302272:662573-662861 + ACTT------T----TTAGCTT-------TT--CCCGTGAGCTCCAGT-TTGCATTTAAGAAC--------AAGAATGGTGAGTTGAACA---------TCTA------------TTACTT------------------------------------------AACAT--CT-------AAGTAA------------AACCGCAG---TGCAAACCCAT--C------TGTTGC-ATGTGTTTCGAGAAGCTTCCACAACTA------GT-ATACCCCCGCTGA-----CTTGCCGGGGGAGGACTG--------TTGTGTAATC-------------------------AGT----------------GTGTGT-GTGTAA-----------AA-------CATGGGTTAATTTG--------TTGGGGGGC-----TTTCTT------TA----------CCCA------TTGTAGGCCGCCGCTATCAAAAGGATCATCCCCATGCTGGACCGCATCCTCATCCA
droAna3 scaffold_13337:4141594-4141858 - TCTT------T----TTGACTT-------TT---CAAAGCACCCCAGA-TTGCATTTATACAC--------AAAAATGGTAAGTTAATGA---------TTTT------------CCGATC------------------------------------------CATAT--AT-------CATTCA------------AGAATGGC--ATTGAGTTCATT----T----GCAA-CA-CCATTTTCGAGAAGCTTCGGCGGTCG------CA-TCTCCACCTCCCA-----CTTGCCGG------GCTG--------TTGTGTAATA-------------------------GTT-------------------------------------------------CATGGGTTAAC-TA--------TGGG--CTC-----TTCTT--------A----TA----ATCT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACAGGATTCTCATCCA
droBip1 scf7180000395450:270017-270284 - AGTT------T----TTGGCTT--------T--ACAAAGCACCCCAGT-TTGCATTTATAAAC--------AAAAATGGTGAGTTTATTA---------TTTA------------TCGCAT------------------------------------------GAAGT--AT-------CATTCAAAAAAGCC--------------AAT-GAGTGG----ATG----GCATCA-CCATTTTTCGAGAAGCTTCGGCGGGTG------CA-TCTCCACCTCCCA-----CTTGCCGG------GCTG--------TTGTGTAACA-------------------------GTT----------------------------C-----------AA-------CATGGGTTAAA-TA--------TGGG--CTC------TGCTT------GT-----T----ATTT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACAGGATTCTCGTCCA
dp5 XR_group6:4373592-4373869 + T----------------------------TT--CTCAGTCGCTCCAGT-TTGCATTTAAAAAA-------GAGAAATGGTAAGTTGAGC-------TAGGGATCCAATCGGAAGGT---------------------------------TATATGCGT-----AGCA--A-TCACTACA------AAAAA-CC---------G--------------TG----C----CCAA-AA-CTTTGTTCGAGAAGTTTCCACATACC------TT-TTCTTGCTTCTAC-----TTCGCCGG------CCTG--------TTGTGTAACA-------------------------GGGGGCAGAGCAGCCAATTAAAAGAAACATGA-----------AT--------------TGAATTGA----------------------------------A----TT----ACTA------TTGTAGGCCGCTGCTATTAAGAAGATTATACCCATGCTGGATCGCATTCTAATTCA
droPer2 scaffold_9:2662773-2663050 + T----------------------------TT--CTCAGTCGCTCCAGT-TTGCATTTAAAAAA-------GAGAAATGGTATGTTGAGC-------TAGGGATCCAATCGGAAGGT---------------------------------TATATGCGT-----AGCA--A-TCACTACA------AAAAA-CC---------G--------------TG----C----CCAA-AA-CTTTGTTCGAGAAGTTTCCACATACC------TT-TTCTTGCTTCTAC-----TTCGCCGG------CCTG--------TTGTGTAACA-------------------------GGGGGCAGAGCAGCCAATTAAAAGAAACATGA-----------AT--------------TGAATTGA----------------------------------A----TT----ACTA------TTGTAGGCCGCTGCTATTAAGAAGATTATACCCATGCTGGATCGCATTCTAATTCA
droWil2 scf2_1100000004511:5287807-5288070 + AATT------G----AATATTA-------ATTCCTAACATCATCCAGT-TTGCATTTAAAAATCTT-----TAATATGGTAAGTTAATTGG--------ATGA------------TTAAAG------------------------------------------GAAGTATAC-------TT--TAATACATGCAAAGACTA-GAG--C-------CGTA----G----GCAT-CA-AGGCCTTCGCGAAGTTTCTAAAAGG---------------------CT-----TTTGCCGG------GTGTTTGGGTGATTGTGTAACA-------------------------CTT--------------------------------------------------------------------------------------CATTC------ATTAAAC-TCTAATATGTGAAATTGTAGGCCGCCGCTATCAAGAAAATCATCCCAATGCTGGATCGCATCCTAATTCA
droVir3 scaffold_13049:22496393-22496721 - ATTT------ATTAATTAAGATTTA-GCTGT--TCGAAGCGCTCCAGT-TTGCATTTAATTACA------TAAAAATGGTAAGTACAGTAT--------TGAG------------TTATTTAAAAA-------------CC-CTTAAGTCGCATG-----------------------------------------------------TGGCGTTCAAAGAAT------TTCAC-TTGAGCTTCTCGAAGTTTCTGCATACG------C-----TGATAACTCA----CCGTGCCGG------GCTG--------TTGTGTAACTCTGCCC-TAGCC-----CATAG---GCG----------------GGGGGGAATATAA-----------TATGTGA------AATTAAT-GA-----CAGTAA-ATTGC-----TTATTAAAATCGAATGATTCGCAATTGT------ATATAGGCTGCCGCTATTAAGAAGATCATCCCCATGCTTGACCGCATTTTGGTGCA
droMoj3 scaffold_6680:17103826-17104171 - ACTTACAGTTATCAATTAAGTTTAAAGATAT--TTAAAGCAGTCCAGTTTTGCATTTAATAACATA-----AAAAATGGTGAGTATATTGCTAAGCT--TGAT------------TTGATT------------------CCGTTT--ACCGCCTGTGT-----A--A--A-TCAC-----------AA-----------------------------AAA--C--------CAT-TTGCGCTTCTCGAAGTTTCTACATATG------C-----TGATAACTCATTCGCCTTGCCGG------GTTG--------TTGTGTAACTCTGCTC-TGGCGTAGCTTTTGGGCAGCA----------------GGGGGGAATATTG-----------TC--------------TGACATCAATTACCATAG-ATTGC-----TCAGTA-AATGAAATTATTTACAAATGT------TTTTAGGCAGCCGCAATCAAGAAAATCATCCCCATGCTGGATCGCATTTTGATTCA
droGri2 scaffold_15110:21044655-21044966 + ACCA------A----TTAAGTTTTA-GCTCA--TAAAGACGCCCCAGT-TTGCATTTAAAAATATA----TAAAAATGGTAAGTGCATGCT--------AAAG------------TTAAAA-CACATCCTAAGAGAAAAC------AAAAACATGCGTTGCTCAATAT--AA-------TT--TA-----------------------------------------------AC-ATAAGCTTCTCGAAGTTTCG-CAAAAA------C-----TGAT------------------A------ACTG--------TTGTGTAACTCTGCCCCCGGCATTGATTGT-----GGT----------------GGGGGTAACAAATACCGCTGATAGCATGTGAATCTTG----------------------------------TTTT------AATAATT-TTAAATAT------GTGCAGGCTGCTGCTATTAAGAGGATCATCCCCATGCTGGATCGCATTCTGGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTC------A----TTAACTT-------TT--ATCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GC-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATGT-CGGTTCTTCGAGAAGGTTCCACGGCTT------TC-GGCCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------AGGAAAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGAAGATCATCCCCATGCTGGAC..............2812.00200100001000000000
..........................................................................................................................................................................................................................AGGAT------GATGT-CGGTTCTTCGAG.........................................................................................................................................................................................................................................................................................2212.00200200000000000000
.....................................................................................................................................................................................TTTA------------GAAGACAG--TTTGAAATC........................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTT------AA----------TGAT------CCTCAGGC................................................1912.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACCGC...........2511.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------AA----------TGAT------CCTCAGGCC...............................................1811.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTG.................1911.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGAC..............2411.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAAGATCATCCCCATGCTGGACC.............2811.00100100000000000000
......................................GCGCTCCAGT-TTGCATTTAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCTGGAC..............2311.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCT..................2011.00100000010000000000
...........................................CCAGT-TTGCATTTAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGACC.............2511.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTG.................2111.00101000000000000000
.....................................................................................................................................................................................................................................GATGT-CGGTTCTTCC...........................................................................................................................................................................................................................................................................................1590.11100000000100000000
droSec2
ACTC------A----TTAACTT-------TT--ATCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GC-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATGT-CGGTCTTTCGAGAAGGTTCCACGGCTT------TC-GGCCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAAAAACATGA-----------AC-------CATGGGTTAAT-TG--------TTGG--GCC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................AATGGTGAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................2612.0021100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCT..................2112.0021100
..........A----TTAACTT-------TT--ATCAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CC-----TTTTTT------AA----------TGAT------CCTCAGGT................................................2211.0011000
.....................T-------TT--ATCAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................ACAG--TTTGAAATCGAAGGAT------GATGT-.....................................................................................................................................................................................................................................................................................................2511.0010100
.........................................CTCCAGT-TTGCATTTAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................TGCATTTAAGAAT--------TAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCTGGACC.............2611.0010010
.......................................................................................................................................................................................TA------------GAAGACAG--TTTGAAATCGAA.....................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................AAT--------TAAAATGGTGAGTTAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTATCAAGAAGATCATCC.........................2011.0010100
.................AACTT-------TT--ATCAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCTATCAAGAAGAT..............................1811.0010010
.....................T-------TT--ATCAAGCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........A----TTAACTT-------TT--ATCAAGCGCTCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCGCTATCAAGAAGATC.............................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGA...............2011.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................ATGA-----------AC-------CATGGGTTAAT-TG--------TTGG--GC................................................................................................2511.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCATGCTGGACCGCATC........2211.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATCCCCATGCTG.................2711.0010010
dm3
ACTC------A----TTAACTT-------TT--ATCAACCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTAAGTTAAAAG---------TGCA------------TTGCCC------------------------------------------CATAT--GA-------GGTTTA------------GAAGACAG--TTTGAAATCGAAGGAT------GATAT-CGGTTTTTCGAGAAGGTTCCACGGCTT------TC-GGTCCACATCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGAAACATTGA---AA-------CATGGGTTAAT-TG--------TTGG--GTC-----TTTTTT------AA----------TGAT------CCTCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTAATCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGACC.............25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000100000000000000000000024000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGACCGC...........2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAGATCATCCCCATGCTGGACC.............2718.0080000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATCCCCATGCTGGAC..............2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGAAGATCATCCCCATGCTGG................2615.0050000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000
..........................................................................AATGGTAAGTTAAAAG---------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000100000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGACCGCAT.........2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................ATTTAAGAAT--------TAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTGGAC..............2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TC-GGTCCACATCCCA-----TTCGCCGG------GCTG--------T....................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCTGGACC.............2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................................................................T-CGGTTTTTCGAGAAGGTTCCACGGCT...........................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGACCG............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CAG--TTTGAAATCGAAGGAT------G..........................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGACC.............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCT..................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000011000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGAC..............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACC.............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................A-----TTCGCCGG------GCTG--------TTGTG................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCTATCAAGAAGATCATC..........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATCCCCATGCTG.................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCTGGACCG............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGACC.............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACCGCA..........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCTGG................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000
...........................................................................................................................................................................................................................GGAT------GATAT-CGGTTTTTCGAGAAGG.....................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCCCCATGCTGGACCGCAT.........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AATGGTAAGTTAAAAG---------TGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TT-------TT--ATCAACCGCTCCAGT-TTGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GTCCACATCCCA-----TTCGCCGG------.................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A----TTAACTT-------TT--ATCAACCGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAGATCATCCCCATGCTGGA...............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGACCGC...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGAAGATCATCCCCATGCTG.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CCAGT-TTGCATTTAAGAAT--------TAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGAC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCCCA-----TTCGCCGG------GCTG--------TTGTGTA..............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................ATTTAAGAAT--------TAAAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATCCCCA......................2211.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CATAT--GA-------GGTTTA------------GAAGACAG--TTTGAAA..........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCATGCTGGACCGCA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATCCCC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................T------AA----------TGAT------CCTCAGGCCGCCGCT.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTAACTT-------TT--ATCAACCGCTCCAGT-TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAACTT-------TT--ATCAACCGCTCCAGT-TTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CCAGT-TTGCATTTAAGAAT--------TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TC------A----TTAACTT-------TT--ATCAACCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCCAGT-TTGCATTTAAGAAT--------TAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGCTCCAGT-TTGCATTTAAGAAT--------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCTG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GGCTT------TC-GGTCCACATCCCA-----...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AA-------CATGGGTTAAT-TG--------TTGG--GT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCTATCAAGAAGATCATCCCCATG....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................GG------GCTG--------TTGTGTAATC-------------------------AAT----------------T..............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
........................................GCTCCAGT-TTGCATTTAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAAGATCATCCCCATGCTG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCTGG................2311.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................ACAG--TTTGAAATCGAAGGAT------GA.........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCGCTATCAAGAAGATCAT...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................AATGGTAAGTTAAAAG---------TGCA------------TTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................CGCTCCAGT-TTGCATTTAAGAAT--------TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCATGCTGGACCGCG..........2011.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GGTAAGTTAAAAG---------TGCA------------TTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CCC------------------------------------------CATAT--GA-------GGTTTA------------GAAGACAG--.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAACCGCTCCAGT-TTGCATTTAAGAAT--------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................A-------CATGGGTTAAT-TG--------TTGG--GTC-----..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AATC-------------------------AAT----------------GAGAGAAACATGA..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAT--GA-------GGTTTA------------GAAGACAG--TTTGAAA..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCCCATGCTGGACCGCATCCTAAT...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATCAACCGCTCCAGT-TTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................AT--------TAAAATGGTAAGTTAAAAG---------TGCA------------T............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCCCCATGCTGGAC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATCCCCATGCTGGACCGC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCCAGT-TTGCATTTAAGAAT--------TAAAATGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCGCTATCAAGAA.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------TGAT------CCTCAGGCCGCCG...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCATGCTGGACCGCATC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTTAAT-TG--------TTGG--GT................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................A-----TTCGCCGG------GCTG--------TTGTGT...............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................TAACTT-------TT--ATCAACCGCTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAAGATCATCCCCATGCT..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CCA-----TTCGCCGG------GCTG--------TTGTG................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................AT--------TAAAATGGTAAGTTAAAAG---------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATCCCCATGCTGG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATCCCCATGCC..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACCGCATC........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AA-------CATGGGTTAAT-TG--------TTGG--G.................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGGACCGCATCCTAATC..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................A-------CATGGGTTAAT-TG--------TTGG--G.................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AAAATGGTAAGTTAAAAG---------TGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTATCAAGAAGATCATCCCCATGCT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGCTCCAGT-TTGCATTTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGACCG............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................C-------------------------AAT----------------GAGAGAAACATGAAACATTGA---A......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................T-TTGCATTTAAGAAT--------TAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCTG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATCCCCATGCT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................G--TTTGAAATCGAAGGAT------GATA.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACTT-------TT--ATCAACCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTC------A----TTAACTT-------TT--ATCAACCGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTGGACCG............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAACTT-------TT--ATCAACCGCTCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTG.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AGAAT--------TAAAATGGTAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTATCAAGAAGATCATCCCCA......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TTA------------GAAGACAG--TTTGAAATCGAA.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................T--ATCAACCGCTCCAGT-TTGCATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GAAACATTGA---AA-------CATGGGT.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............TTAACTT-------TT--ATCAACCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCCCA-----TTCGCCGG------GCTG--------.....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCATGCTGGACCGCATCC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...C------A----TTAACTT-------TT--ATCAACCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGACCGC...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GAGAGAAACATGAAACATTG...........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................CTCCAGT-TTGCATTTAAGAAT--------TAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATCCCCATGCT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CCAGT-TTGCATTTAAGAAT--------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCATCCCCATGCTGGACCGCAT.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCATGCTGGACCGCATCCTAATCC.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A----TTAACTT-------TT--ATCAACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GGTTTA------------GAAGACAG--TTTGAAAT.........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
droEre2
ACTC------A----TTAACTT-------TT--CTCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTTAAAAG---------TGCA------------TTGTCC------------------------------------------CATAA--GC-------CATTTA------------GAAGAAAG--TTGGAAATCGAAG--------GGAGGG-CGGTTCTTCGAGAAGGTTCCACAACTT------TC-GGCCCAGCTCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTATTT------AA----------TGAT------CTCCAGGCCGCCGCTATCAAGAAGATCATACCCATGCTGGACCGCATCCTGATCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATACCCATGCTG.................2612.0020001100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAAGAAGATCATACCCATGCTGGAC..............2812.0020000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATACCCATGCTGGACCGCATCCTGA....2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATACCCATGCTGG................2711.0011000000
.............................TT--CTCAAGCGCTCCAGT-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATACCCATGCTGGAC..............2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................A-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----C.........................................................................................2411.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATACCCATGCTG.................2211.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATCATACCCATGCTG.................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTATCAAGAAGATCATACC........................2111.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCCATGCTGGACCGCA..........1911.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATACCCATGCT..................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATACCCATGC...................2411.0010100000
..........A----TTAACTT-------TT--CTCAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
................TAACTT-------TT--CTCAAGCGCTCCAGT-TTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
................TAACTT-------TT--CTCAAGCGCTCCAGT-TTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATACCCATGCTGGACC.............2611.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCCATGCTGGACCGCATCCT......2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATACC........................2011.0010000100
droYak3
ACTC------A----TTAACTT-------TT--CTCAAGCGCTCCAGT-TTGCATTTAAGAAT--------TAAAATGGTGAGTAAAAAG---------TGCA------------TGGTCC------------------------------------------CAAAT--GC-------CATTAA------------GAAAAAGG--TTGGAAATCGAAG--------GGAGCT-GCGTTCTTCGAGAAGGTTCCAAATCTT------TC-GGCCCACCTCCCA-----TTCGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGG--GGC-----TTATTT------AA----------TGAT------CCCCAGGCCGCCGCTATCAAGAAGATCATACCCATGCTGGACCGCATCCTGATCCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCCATGCTGGACC.............1713.00300000000003
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATACCCATGCTG.................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCGCTATCAAGAAG................................1911.00101000000000
..................................................................................................................................................................................................................................................................................CCACCTCCCA-----TTCGCCGG------G................................................................................................................................................................................................................................1911.00101000000000
...C------A----TTAACTT-------TT--CTCAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
ACTC------A----TTAACTT-------TT--CTCAAGCGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATACCCATGCTGGACC.............2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATGCTGGACCGCATCCTGATC..2611.00101000000000
..........A----TTAACTT-------TT--CTCAAGCGCTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGATCATACCCATGCTGGAC..............2511.00101000000000
......................................................TTTAAGAAT--------TAAAATGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.09100100000000
droEug1
AATC------T----TTAACTT-------TT--TCCGAGCGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTGAGTTAAGAA---------TGTA------------AGGCTT------------------------------------------AGAAA--GT-------CATTCA------------AACG-AAG--TTGGAGATCTCT--C------GGATGCACGGTTGTTCGAGAAGGTTCCACAACTTACTATCGGTGGTCCACCTCTCTCT---CTTACCGG------GCTG--------TTGTGTAATC-------------------------AGTGACAG-----------AAACGAAACATGA-----------AA-------CATGGAATAAT-TG--------TTGG--GTC-----TTATTT------AA----------TGCT------CTTTAGGCCGCAGCTATCAAGAAGATCATCCCCATGCTGGATCGCATCCTGATCCASizeHit CountTotal NormTotal
No Reads
droBia1
ACT-------------TGACTT-------TT--TCCAAGCGCTCCAGT-TTGCATTTAAGAACTCAAGAACAAAAATGGTGAGTTAATGT---------TGTG------------TTGCCC------------------------------------------AGCAT--GC-------CT--CAAA----------AAAAAGAG--CCGAGGATCGCT--A------TGACCC-TCGACTTTCCAGAAGGTTCCACAGCTT------GCGGGACCTGCTCTCC-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AGT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-GG--------TGTATTTGC-----TTCTCT------GA----------TTCC------ATCCAGTCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCASizeHit CountTotal NormTotal
No Reads
droTak1
ACTC------T----CAAACTT-------TT--CACAAGCGCTCCAGT-TTGCATTTAAGAAC--------TAAAATGGTGAGTTAAGAC---------TGTG------------TTGCTT------------------------------------------AGCA---GT-------GAATAG------------AACA-GAGATTTGGAAATCGGAG--CG----GTGTCT-ACGATTTTCGAGAATATTCCACGAAG----------ATTCCACCTCTCT-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAGCACGA-----------AA-------CATGGGTTAAT-CG--------TTGG--GGCC----TCACTC------AA----------TGCT------TCGCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATTCTGATCCASizeHit CountTotal NormTotal
No Reads
droEle1
ACTC------T----TTAACTT-------TT--CACAAACGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTGAGTTAAGAG---------ATGA------------TTACAT------------------------------------------AAAAA--GC-------CAATCA------------AACG-GAG--------ATCAAAA--CCATTTGGGA-TACTGTTTTTCGGGAAGCTTCCAGAACTC------GGGTGTCCATCTCTCTCTCTCGTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGGGGGGC-----TTATTT------TA----------TGCT------TTCCAGTCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCASizeHit CountTotal NormTotal
No Reads
droRho1
ACTC------T----TAAACTT-------TT--ATCAAACGCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTAAGTTAATTG---------TATA------------TTACTT------------------------------------------AAGAA--GC-------CATTGA------------AACG-GAG--ATGGAAATCAAC--T------GGGAGT-ACGTTTTTCAAGAAGCTTCCAGAACTC------GG-GGTCCATCTCTCTTT---TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATGA-----------AA-------CATGGGTTAAT-TG--------TTGGGGGGC-----TTATTT------CG----------TGCT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATCCTGATCCASizeHit CountTotal NormTotal
No Reads
droFic1
ATTC------T----TTAGATT-------CT--CTCAAGCTCTCCAGT-TTGCATTTAAGAAC--------AAAAATGGTAAGTTAAAAG---------TGAC------------CTAATA------------------------------------------ACGAT--GC-------CT--TAATA---------AATG-TAA--ATGGAAATCGGG--TT------TGTGT-GAGTAATTCGAGAAGCTTCCACAACTC------TGGGGTCCATCTCTCT-----TTTGCCGG------GCTG--------TTGTGTAATC-------------------------AAT----------------GAGAGAAACATAA-----------AA-------CATGGGTTAAT-GG--------TTGG--GTGTTCATTTATCT------TA----------TATC------TTTAAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACCGCATTCTGATCCASizeHit CountTotal NormTotal
No Reads
droKik1
ACTT------T----TTAGCTT-------TT--CCCGTGAGCTCCAGT-TTGCATTTAAGAAC--------AAGAATGGTGAGTTGAACA---------TCTA------------TTACTT------------------------------------------AACAT--CT-------AAGTAA------------AACCGCAG---TGCAAACCCAT--C------TGTTGC-ATGTGTTTCGAGAAGCTTCCACAACTA------GT-ATACCCCCGCTGA-----CTTGCCGGGGGAGGACTG--------TTGTGTAATC-------------------------AGT----------------GTGTGT-GTGTAA-----------AA-------CATGGGTTAATTTG--------TTGGGGGGC-----TTTCTT------TA----------CCCA------TTGTAGGCCGCCGCTATCAAAAGGATCATCCCCATGCTGGACCGCATCCTCATCCASizeHit CountTotal NormTotal
No Reads
droAna3
TCTT------T----TTGACTT-------TT---CAAAGCACCCCAGA-TTGCATTTATACAC--------AAAAATGGTAAGTTAATGA---------TTTT------------CCGATC------------------------------------------CATAT--AT-------CATTCA------------AGAATGGC--ATTGAGTTCATT----T----GCAA-CA-CCATTTTCGAGAAGCTTCGGCGGTCG------CA-TCTCCACCTCCCA-----CTTGCCGG------GCTG--------TTGTGTAATA-------------------------GTT-------------------------------------------------CATGGGTTAAC-TA--------TGGG--CTC-----TTCTT--------A----TA----ATCT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACAGGATTCTCATCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCCCATGCTGGACA.............2012.002020000
.....................T-------TT---CAAAGCACCCCAGA-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCT..................1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCATGCTGGACAGGATTCTCATCC.2811.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAGAAGATCATCCCCATGCT..................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCAAGAAGATCATCCCCATGCT..................2611.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCTGGACAGG...........2611.001010000
..................ACTT-------TT---CAAAGCACCCCAGA-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.................GACTT-------TT---CAAAGCACCCCAGA-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTATCAAGAAGATCATCCC........................2311.001010000
...T------T----TTGACTT-------TT---CAAAGCACCCCAGA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...............................................A-TTGCATTTATACAC--------AAAAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAAGATCATCCCCATGCTGGAC..............2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGATCATCCCCATGCT..................1911.001010000
................TGACTT-------TT---CAAAGCACCCCAGA-TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.CTT------T----TTGACTT-------TT---CAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................GACTT-------TT---CAAAGCACCCCAGA-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATCCCCATGCTGGACA.............2111.001010000
droBip1
AGTT------T----TTGGCTT--------T--ACAAAGCACCCCAGT-TTGCATTTATAAAC--------AAAAATGGTGAGTTTATTA---------TTTA------------TCGCAT------------------------------------------GAAGT--AT-------CATTCAAAAAAGCC--------------AAT-GAGTGG----ATG----GCATCA-CCATTTTTCGAGAAGCTTCGGCGGGTG------CA-TCTCCACCTCCCA-----CTTGCCGG------GCTG--------TTGTGTAACA-------------------------GTT----------------------------C-----------AA-------CATGGGTTAAA-TA--------TGGG--CTC------TGCTT------GT-----T----ATTT------TTCCAGGCCGCCGCTATCAAGAAGATCATCCCCATGCTGGACAGGATTCTCGTCCASizeHit CountTotal NormTotal
No Reads
dp5
T----------------------------TT--CTCAGTCGCTCCAGT-TTGCATTTAAAAAA-------GAGAAATGGTAAGTTGAGC-------TAGGGATCCAATCGGAAGGT---------------------------------TATATGCGT-----AGCA--A-TCACTACA------AAAAA-CC---------G--------------TG----C----CCAA-AA-CTTTGTTCGAGAAGTTTCCACATACC------TT-TTCTTGCTTCTAC-----TTCGCCGG------CCTG--------TTGTGTAACA-------------------------GGGGGCAGAGCAGCCAATTAAAAGAAACATGA-----------AT--------------TGAATTGA----------------------------------A----TT----ACTA------TTGTAGGCCGCTGCTATTAAGAAGATTATACCCATGCTGGATCGCATTCTAATTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTATACCCATGCTGGAT..............2012.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAGATTATACCCATGCTGGATC.............2612.0020110000000
.................................CTCAGTCGCTCCAGT-TTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..................................TCAGTCGCTCCAGT-TTGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGCTATTAAGAAGA...............................1811.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTATTAAGAAGATTATACCCATGC...................2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAGATTATACCCATGCTGGATCGCA..........2911.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATGCTGGATCGCATTCTAATTC.2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGAAGATTATACCCATGCTGGA...............2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACCCATGCTGGATCGCATTC.......2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATGCTGGATCGCATTC.......2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGATTATACCCATGCT..................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTATACCCATGCTGGAT..............2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATTATACCCATGCTGGATCGCA..........2611.0010100000000
....................................................................................TGAGC-------TAGGGATCCAATCGGAAGGT---------------------------------TAT........................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGAAGATTATACCCATGCTGGAC..............2711.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATGCTGGATCGCAT.........1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCCATGCTGGATCGC...........2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTATACCCATGCTGGATCGCATTCT......2711.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCCATGCTGGATCGCATTCT......2311.0010010000000
droPer2
T----------------------------TT--CTCAGTCGCTCCAGT-TTGCATTTAAAAAA-------GAGAAATGGTATGTTGAGC-------TAGGGATCCAATCGGAAGGT---------------------------------TATATGCGT-----AGCA--A-TCACTACA------AAAAA-CC---------G--------------TG----C----CCAA-AA-CTTTGTTCGAGAAGTTTCCACATACC------TT-TTCTTGCTTCTAC-----TTCGCCGG------CCTG--------TTGTGTAACA-------------------------GGGGGCAGAGCAGCCAATTAAAAGAAACATGA-----------AT--------------TGAATTGA----------------------------------A----TT----ACTA------TTGTAGGCCGCTGCTATTAAGAAGATTATACCCATGCTGGATCGCATTCTAATTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................TT--CTCAGTCGCTCCAGT-TTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.................................................................................................................................................................................................................................................................................CTTGCTTCTAC-----TTCGCCGG------CCT..............................................................................................................................................................................................................................2212.002200000
....................................................................................................................................................................................................................................................................................GCTTCTAC-----TTCGCCGG------CCT..............................................................................................................................................................................................................................1912.002200000
...................................................................................................................................................................................................................................................................................TGCTTCTAC-----TTCGCCGG------CCT..............................................................................................................................................................................................................................2012.002200000
..............................................................................................................................................................................................................................................................CACATACC------TT-TTCTTGCTT........................................................................................................................................................................................................................................................1911.001001000
..............................T--CTCAGTCGCTCCAGT-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.............................TT--CTCAGTCGCTCCAGT-TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................AATCGGAAGGT---------------------------------TATATGCG...................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................TGCTTCTAC-----TTCGCCGG------CCTG--------G....................................................................................................................................................................................................................2211.001100000
..........................................TCCAGT-TTGCATTTAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GA----------------------------------A----TT----ACTA------TTGTAGGCCGCT............................................2111.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAGATTATACCCATGCTGGATC.............2611.001010000
..................................................................................................................................................................................................................................................................................................................G--------TTGTGTAACA-------------------------GGGGGCAGA.........................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAAGAAGATTATACCCATGCTGGA...............2711.001010000
.............................TT--CTCAGTCGCTCCAGT-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................................CTCAGTCGCTCCAGT-TTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTATTAAGAAGATTATACCCATGCTGG................2911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCCATGCTGGATCGCATTCT......2311.001010000
droWil2
AATT------G----AATATTA-------ATTCCTAACATCATCCAGT-TTGCATTTAAAAATCTT-----TAATATGGTAAGTTAATTGG--------ATGA------------TTAAAG------------------------------------------GAAGTATAC-------TT--TAATACATGCAAAGACTA-GAG--C-------CGTA----G----GCAT-CA-AGGCCTTCGCGAAGTTTCTAAAAGG---------------------CT-----TTTGCCGG------GTGTTTGGGTGATTGTGTAACA-------------------------CTT--------------------------------------------------------------------------------------CATTC------ATTAAAC-TCTAATATGTGAAATTGTAGGCCGCCGCTATCAAGAAAATCATCCCAATGCTGGATCGCATCCTAATTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAATCATCCCAATGCTGGAT..............2613.00303000
..................ATTA-------ATTCCTAACATCATCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300030
.....................A-------ATTCCTAACATCATCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
...............................................................................................................................................................................................GCAAAGACTA-GAG--C-------CGTA----G----GCA.........................................................................................................................................................................................................................................................................................................2211.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCGCTATCAAGAAAAT..............................2111.00100010
...T------G----AATATTA-------ATTCCTAACATCATCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
........................................CATCCAGT-TTGCATTTAAAAATCTT-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.............................ATTCCTAACATCATCCAGT-TTGCATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................GG------GTGTTTGGGTGATTGTGTAAC............................................................................................................................................................................................................2311.00110000
.............................ATTCCTAACATCATCCAGT-TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................A-------ATTCCTAACATCATCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCCCAATGCTGGATCGCAT.........2411.00100010
..................ATTA-------ATTCCTAACATCATCCAGT-TTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
droVir3
ATTT------ATTAATTAAGATTTA-GCTGT--TCGAAGCGCTCCAGT-TTGCATTTAATTACA------TAAAAATGGTAAGTACAGTAT--------TGAG------------TTATTTAAAAA-------------CC-CTTAAGTCGCATG-----------------------------------------------------TGGCGTTCAAAGAAT------TTCAC-TTGAGCTTCTCGAAGTTTCTGCATACG------C-----TGATAACTCA----CCGTGCCGG------GCTG--------TTGTGTAACTCTGCCC-TAGCC-----CATAG---GCG----------------GGGGGGAATATAA-----------TATGTGA------AATTAAT-GA-----CAGTAA-ATTGC-----TTATTAAAATCGAATGATTCGCAATTGT------ATATAGGCTGCCGCTATTAAGAAGATCATCCCCATGCTTGACCGCATTTTGGTGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................GT--TCGAAGCGCTCCAGT-TTGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003000000000001001000000000000001000000000000000000000000000000000
.......................TA-GCTGT--TCGAAGCGCTCCAGT-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000000000000000000000001100100000000000000000000000000000000000
..............ATTAAGATTTA-GCTGT--TCGAAGCGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000200000000000000000000000000000000000000000000000000000000000
....................ATTTA-GCTGT--TCGAAGCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAAGAAGATCATCCCCAT.....................2112.002000000200000000000000000000000000000000000000000000000000000000
..................AGATTTA-GCTGT--TCGAAGCGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100000000000000000010000000000000000000000000000000000000000000
....................................AAGCGCTCCAGT-TTGCATTTAATTACA------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
............................................CAGT-TTGCATTTAATTACA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................GT--TCGAAGCGCTCCAGT-TTGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAAAATCGAATGATTCGCA...................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCATGCTTGACCGC...........1911.001000100000000000000000000000000000000000000000000000000000000000
.................AAGATTTA-GCTGT--TCGAAGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCATGCTTGACCGCATTTTGGC...2411.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TCTGCCC-TAGCC-----CATAG---GCG----------------G..............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..TT------ATTAATTAAGATTTA-GCTGT--TCGAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGAAGATCATCCCCATGCTT.................2411.001000000000000000001000000000000000000000000000000000000000000000
.................AAGATTTA-GCTGT--TCGAAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCATGCTTGACCGCA..........2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGACCGCATTTTGGTGC.2011.001001000000000000000000000000000000000000000000000000000000000000
................TAAGATTTA-GCTGT--TCGAAGCGCTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.......................TA-GCTGT--TCGAAGCGCTCCAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTTGACCGCATTTTGGTGC.2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCATCCCCATGCTTGAC..............2011.001001000000000000000000000000000000000000000000000000000000000000
..................................CGAAGCGCTCCAGT-TTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGAAGATCATCCCCATGCTTGA...............2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CTGCATACG------C-----TGATAACTCA----CC..............................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...................GATTTA-GCTGT--TCGAAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
............................TGT--TCGAAGCGCTCCAGT-TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
...................GATTTA-GCTGT--TCGAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.............................GT--TCGAAGCGCTCCAGT-TTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCATGCTTGACCGCATTTTGGTGC.2811.001001000000000000000000000000000000000000000000000000000000000000
.....................TTTA-GCTGT--TCGAAGCGCTCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
..................................CGAAGCGCTCCAGT-TTGCATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................C-----TGATAACTCA----CCGTGCCGG------GCTG--------T....................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATCATCCCCATGCTTGACCGC...........2511.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
ACTTACAGTTATCAATTAAGTTTAAAGATAT--TTAAAGCAGTCCAGTTTTGCATTTAATAACATA-----AAAAATGGTGAGTATATTGCTAAGCT--TGAT------------TTGATT------------------CCGTTT--ACCGCCTGTGT-----A--A--A-TCAC-----------AA-----------------------------AAA--C--------CAT-TTGCGCTTCTCGAAGTTTCTACATATG------C-----TGATAACTCATTCGCCTTGCCGG------GTTG--------TTGTGTAACTCTGCTC-TGGCGTAGCTTTTGGGCAGCA----------------GGGGGGAATATTG-----------TC--------------TGACATCAATTACCATAG-ATTGC-----TCAGTA-AATGAAATTATTTACAAATGT------TTTTAGGCAGCCGCAATCAAGAAAATCATCCCCATGCTGGATCGCATTTTGATTCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..TTACAGTTATCAATTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........ATCAATTAAGTTTAAAGATAT--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........ATCAATTAAGTTTAAAGATAT--TTAAAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAATCAAGAAAATCATCCC........................2211.001010000
...............................................................................................................................................................................................................................................................................................................................GTAACTCTGCTC-TGGCGTA.............................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCATCCCCATGCTG.................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................GGCAGCA----------------GGGGGGAATATTG-----------.......................................................................................................................................2011.001000100
.............AATTAAGTTTAAAGATAT--TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................TTGCCGG------GTTG--------TTGTGTAACTC..........................................................................................................................................................................................................2211.001100000
droGri2
ACCA------A----TTAAGTTTTA-GCTCA--TAAAGACGCCCCAGT-TTGCATTTAAAAATATA----TAAAAATGGTAAGTGCATGCT--------AAAG------------TTAAAA-CACATCCTAAGAGAAAAC------AAAAACATGCGTTGCTCAATAT--AA-------TT--TA-----------------------------------------------AC-ATAAGCTTCTCGAAGTTTCG-CAAAAA------C-----TGAT------------------A------ACTG--------TTGTGTAACTCTGCCCCCGGCATTGATTGT-----GGT----------------GGGGGTAACAAATACCGCTGATAGCATGTGAATCTTG----------------------------------TTTT------AATAATT-TTAAATAT------GTGCAGGCTGCTGCTATTAAGAGGATCATCCCCATGCTGGATCGCATTCTGGTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................TAAAGACGCCCCAGT-TTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATTAAGAGGATCATCC.........................1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGGATCATCCCCATG....................1911.00110
......................................ACGCCCCAGT-TTGCATTTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
........................................................................................................................................................................................................................................................................................................................................................................................ACAAATACCGCTGATAGCATGT..................................................................................................................................2211.00101
...................GTTTTA-GCTCA--TAAAGACGCCCCAGT-T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGATCATCCCCATGCTGGATC.............2411.00110

Generated: 05/18/2015 at 11:36 AM