ID:

dsi_7265

 Coordinate:

2r:2458585-2458734 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -9.7 -9.7

Flybase annnotation

CDS [2r_2458735_2458948_+]; exon [2r_2458735_2459118_+]; intron [2r_2457475_2458734_+]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACATCGCTTTACCTACATAGTTTTCAACAAATAACCTTTAGTATACCCTTCTACTCTACAAGTTAACAGAGAATAACGAGAATAATTAACATAGAAAATTATAAATTGGTTGGCCTTATGTTTTCTTTTTCTGAATATAATCAATTGGAACCCTGATTTTAAATTACATGTTTTATGCTTTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGGATTGGAATTTCATCATCCG
*******************************************************............((((((.....(((((.....(((((((..(((((.....)))))....))))))))))))))))))..****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 M023
head
 M024
male body		 O002
Head
 GSM343915
embryo
.............................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCATC.. 27 0 1 9.00 9 0 5 1 1 2 0 0 0 0 0 0
...............................................................................................................TGGCCTTATGTTTTCTTTTTCTGAA.................................................................................................................. 25 0 1 7.00 7 2 2 2 0 1 0 0 0 0 0 0
.......................................................TCTACAAGTTAACAGAGAATAACGAGAA....................................................................................................................................................................... 28 0 1 5.00 5 4 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................TGCTCTATTTCACAGTGGCATAAACT....................................... 26 0 1 5.00 5 2 1 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGGAGTGGATTGGAATTTCATCATC.. 25 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGGCCTTATGTTTTCTTTTTCTGAA.................................................................................................................. 26 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCTCTGGAGTGGATTGGAATTTCAT...... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
...................................................................................TAATTAACATAGAAAATTATAAATTGGT........................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
................................................................TAACAGAGAATAACGAGAATAATTAACA.............................................................................................................................................................. 28 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGGAA............ 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCA.... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTG............... 25 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGGAT................. 26 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
..........................................................................TAACGAGAATAATTAACATAGAAAAT...................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................TAACATAGAAAATTATAAATTGGTTGGAA...................................................................................................................................... 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................TAACGAGAATAATTAACATAGAAAATTA.................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGG.............. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGGCATAAACTTGGTCCCAGCTCTGGA....................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................TTCTTTTTCTGAATATAATCAATTGG..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................TTCTACTCTACAAGTTAACAGAGA................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATTGGAATTTCATCATC.. 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TGGCCTTATGTTTTCTTTTTCTGCA.................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGGA............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGTGGATTG............... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................TGGAATTATGTTTTCTTTTTCTGAATA................................................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGGCATAAACTTGGTCCCAGCTCTGGAGTG.................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGGCA............ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................TAGAAAATTATAAATTGGTTGGAATT.................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GGTCCCAGCTCTGGAGTGGATTGGAA............ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................CCTTTAGTATACCCTTCTACTCTAC.............................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTGGAGTGGATTGGAATT.......... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGGAATT.......... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGCATAAACTTGGTCCCAGCTCTGGA....................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................ATTATAAATTGGTTGGCCT..................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................TGCTTTTCTTGCTCTATTTCACAGTGGCA............................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TACAAGTTAACAGAGAATAACGAGA........................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGG.............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................ATTGGAACCCTGATTTTAAAT..................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................ACAGTGGCATAAACTTGGTCCCAGC............................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......GCTTTACCTACATAGTTTTCAACAAA.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................AATTATAAATTGGTTGGAATTATGTT............................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................TAGTTTTCAACAAATAACCTTTAGTA.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGTGG................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................TCTACAAGTTAACAGAGAATAACGAGA........................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................TACCCTTCTACTCTACAAGTTAACAGA................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................TAGTTTTCAACAAATAACCTTTAGTATA............................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................GAGAATAACGAGAATAATTAACA.............................................................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCAT... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................CATAGAAAATTATAAATTGGTTGGCC...................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TACATGTTTTATGCTTTTCTTGCTCTA.......................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................TAAATTGGTTGGCCTTATGTTTTCTT.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......GCTTTACCTACATAGTTTTCAACAA........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGGA.................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGGAA............ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................TATACCCTTCTACTCTACAAGTTAACAGA................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGCCTTATGTTTTCTTTTTCTGAATATA.............................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................ATTGGAATTTCATCATCC. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGGAGTGGA.................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................AATTGGTTGGAATTATGTTTT............................................................................................................................. 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..................................................TATACTCTACAAGAAAACAGA................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAAATTACATGTTTT........................................................................... 15 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................AACATGTTTTATGCTCTTGTT................................................................ 21 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................TTCTCTGAAGATTATCAATT....................................................................................................... 20 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..................................ACCTTTACTATACCTTT....................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTGTAGCGAAATGGATGTATCAAAAGTTGTTTATTGGAAATCATATGGGAAGATGAGATGTTCAATTGTCTCTTATTGCTCTTATTAATTGTATCTTTTAATATTTAACCAACCGGAATACAAAAGAAAAAGACTTATATTAGTTAACCTTGGGACTAAAATTTAATGTACAAAATACGAAAAGAACGAGATAAAGTGTCACCGTATTTGAACCAGGGTCGAGACCTCACCTAACCTTAAAGTAGTAGGC
******************************************************************************************************************............((((((.....(((((.....(((((((..(((((.....)))))....))))))))))))))))))..******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body
....AGCGAAATGGATGTATCAAAAGTTGTTT.......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
................................................GAAGATGAGATGTTCAATTGT..................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................AAGTGTCACCGTATTTGAACCAGGGT............................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................AAAAAAAAAAGACTGATATTAT........................................................................................................... 22 3 20 0.15 3 0 0 0 3 0
......................................................................................................................................................TGGGACTGAAATTTAA.................................................................................... 16 1 8 0.13 1 0 0 1 0 0
.......GAAATGGTTGTCTCAAAA................................................................................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 1
...................................................................................................................................................................................................................ACCAGGGTCCACACCTC...................... 17 2 10 0.10 1 0 0 1 0 0
......GGGAATGGATGTATCAA................................................................................................................................................................................................................................... 17 2 14 0.07 1 0 1 0 0 0
.........AATGGATGTAACAAA.................................................................................................................................................................................................................................. 15 1 16 0.06 1 1 0 0 0 0
........................................TCATATGGGAAGATG................................................................................................................................................................................................... 15 0 18 0.06 1 0 0 1 0 0
.........AAGGGATGTATCAGAACTT.............................................................................................................................................................................................................................. 19 3 18 0.06 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2458535-2458784 + dsi_7265 CACATCG--------------CTTTACCT---ACATAGTTTTCAACAAATAACCTTTAGTATACCCTTCTACTC-TACAAGTTAACAGAGAATAACGAGA-------------------------------ATA---ATTA--------------------ACATAGAAAAT-----------------TAT----------AAATTG-----------------GTTGGCCTTATGTTTTC---TTTTTCTGAATATAATCAATTGGAACCCTG----------A--TTTTA--AATTACATGT-------TTTATGCTTTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGGATTGGAATTTCATCATCCG------
droSec2 scaffold_26:128290-128531 + CACATAG--------------CTTTACCT---ACATAGTTTTCAACAAATAACCTTTAGTATACCCTTCTACTC-TACAAGTTAACAGAGAATATCGAGA-------------------------------ATA---ATTA--------------------ACAT-------------------------AT----------AAATTG-----------------GTTGGCCTTATGTTTTC---TTTTTCTGAATATAATCAATTGGAACCCTA----------A--TTTTA--AATTACATGT-------TTTATGCTATTCTTGCTCTATTTCACAGTGGGATAAACTTGGTCCCAGCTCTGGAGTGGATTGGAATTTCATCATCCG------
dm3 chr2R:1498497-1498746 + TACATGAGCTACATTTTATCGTTT-------TACATACTTTTCAACAAATA------------ACCTTCTACTC-TACAAGTTA-C----------GA---GATATAGAAAAGA-----------------TAT---AGAA--------------------ATATAGAAAGT-----------------TAT----------AAATTG-----------------GTTGGCCCTATGTTTTC---TTGTTATAAATATAATACATTGGAACCCTT----------TTTTTTTT--AATTACATGT-------TTTATGCTTTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGTATTGGAATTGCATCACCCG------
droEre2 scaffold_4929:20883378-20883633 - CGGAAACGTTC---------------CCTGTTTTATTCTTTTCAACGAAT-----CTAGTAAATCCT-TTATTC-TACGAGTAA-C----------GG---GTGT------AAA-----------------ATA---AATA----------------ATAAAAATATAAAAT------A--TGTATATAATCAAAAAAAAAAAAATGG-----------------TGTTGCCCTATATTGTGCCTTCCTGCTGAATATAATTACTTGGAACCCTT----------A--TT------------TGT-------AATACGTTGTTCTCGCTGTACTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAATTTATTGGAATCGCTTCACCCG------
droYak3 v2_chr2L_random_001:395471-395620 + ACAAAAAT-------------------------------------------------------------------------------------------------------AAA-----------------ACA---AATA----------------------A-------------------------TAT----------AAATTG-----------------TATGGGGCTATATTGTG---TCCTGCTGATTATGATCAGTTTGAACCCT----------------------------------------TACGCTGTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTACCAGCTCTGGAGTTTATTGGAATCGCATCACCCG------
droEug1 scf7180000407754:8571-8710 + CGGAAACGCTTCCTTCT--------ACCTGTTACATATTTTTCAACGAAT-----CAAGTATACCCTTTTACTC-TACGAGTAA-C----------GG---GT----------------------------ATA---TTTATTTGTAATTGTAAAACATACCCATACAAAAT------------------------------------------------------------------TTTC---A--------------------------------------------------------------------------------------------------------------------------TTTTTTGAAAAGAAACAAATGG------
droBia1 scf7180000302217:33386-33595 - AACCTCTC--------------------------------------------------GTAT--------GCTT----AAGGAAACTAATAATCAAA----------------------------------AGAATTATTA--------------------CTGAAACAAA----------------------------------------------GTACCATCGTTTGCTTAATGTTTTC---CATTGT--TATAATATTTTTTAACATCG-ATTAACTAACTA--CTGCAACTAATACAAGTTTCTAATA----------ATTACGTTATTTTGCAGTGGAATAAACTTGGTTCCTGTTATGGATTTTCTTGGAATCGCGTCACCCA------
droTak1 scf7180000415238:45000-45201 + CGGAAACGCTTCCTTCT--------AGCTGTTACATACTTTTGCACGAAT-----CTAGTATACCCTTTTACTC-TACGAGTAA-C----------GG---GTAT--------AACAATACACTGGGTAAAATA---ATTA--------------------TCT-------------------------TTC----------AAGTTG-----------------GTT--TCTAATGATTTA---CATTTG--TATAAAATATATTTAAGAAC-A----------T--TTTTA--AAATGCAATTTTATATTA-ATTA-AATTTTTGATCAATT-----------------------------------------------------ACA------
droEle1 scf7180000491053:7506-7637 - TTTCATCT-------------TTCTGACT---ACATTATAATCAACAAGC---------------------------------------------------------------------------------------------------------------------AAAACTATAATTTTCA------TTT----------AACTAT------------------------------------------------------------------------------------------------T-------TTTACGCTATTTTTT------CTTTCAGTGGAGTAAACTTGGTTCCCGTTCTGGAATATCTTGGAATAGGGTCACCTG------
droRho1 scf7180000774130:12464-12568 + GAACAATA-----------------------------------------------------------------------------------------GGAAAAAC------AA-------------------------AT------------------------TAAAAAAT-----------------TAT----------AACTTT-----------------GTTGTTTTTAA-TTTTT---TTTTGCTCTTTGGGATTTGGTAACATTT--------------------------------------------------------------------------------------------TAATTTTATGGAATTACGGT-TTTA------
droFic1 scf7180000452497:7963-8073 - ATTATGAA-------------------------------------------------------------------------------------------A-------------------------------ATA---ATTA--------------------ACACAAAATAT-----------------TAT----------AA-------------------------------TATTTTT---TTTTACCTTCAATAAACAAT------------------------------------------------------------------------TATTTTTTTAAAAGTGAATTTTTTTCAAGATTTTTTTTGAATTTTTTCAG-AG------
droKik1 scf7180000302472:2577279-2577343 - TGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTATCGAGCGGCATTAACTTTGTCCCTGTTCTGGAATGGCTCGGAATTGCCTCGTCTG------
droAna3 scaffold_13258:900133-900270 + TTATT--TTTC-----------------------------------------------------CCATTTATTTATATAAATAAATATAAT--------------------AAT-----TCTAAA------AAT---ATTA--------------------AT-------------------------------------------ACTAAAAAATTA-------TTTTATT---------------------------------------------------------------------------------------------TCTTGTATTTTTCAGTGGTGTTAACATGATTTCCATTTTAGAGTTTCTTGGAGTTCCTCCTTCCG------
droBip1 scf7180000396371:941514-941595 - AAATCACA-----------------------------------------------------------------------------------------AAT-------------------------------CT--------------------------------------------------------------------------------------------T-----CTTCTTTCTTT---ATTTTTTAAATGAAAAATATTTAAAATCCA----------T--TTTTA--AATTTCATAT-------TCTTTA-------------------------------------------------------------------ATTTT------
dp5 4_group4:6561490-6561556 + GTTTT--CCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTCAGTGGAATAAATTTGGTGCCCGTTCTGGAATTCCTCGGAATTACCTCAACTG------
droPer2 scaffold_16:295400-295466 - GTTTT--CCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTCAGTGGAATAAATTTGGTGCCCGTTCTGGAATTCCTCGGAATTACCTCAACTG------
droWil2 scf2_1100000004921:1701250-1701319 - AAAATAAA-------------------------------------------------------------------------------AAGGAAGAAA--------------AGA-----------------ACA---ATAA--------------------ACAAAGAAAAT-----------------TCT----------TAATCA-----------------ATTTCTTTTT---------------------------------------------------------------------T-------GGTTTG-------------------------------------------------------------------GTTTT------
droVir3 scaffold_13047:9199155-9199208 + GAAAATAA---------------------------------------------------------------------------------------CGAAA-------------------------------ATG---CTTG--------------------TCATAAAAATT-----------------TAT----------CAAGGG-----------------TTAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------TTATGTT------
droMoj3 scaffold_6496:21640636-21640734 + AATATCAA---------------------------------------------------------------------------------------------AAAT------AA-------------------------ATT-------------------------------------------------AT----------ATAATA-----------------AATGTAAATATTTTTTA---TTTTATTTTATTTATTTAATTAAAAAATTG----------A--TTTTA--AGTTTATTTT-------ATTTTA-------------------------------------------------------------------TTTTT------
droGri2 scaffold_15126:599825-599898 - TTGCTTTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGCGGCATAGACATGATGCCCGTTATGGAGTTCCTTGGCATTGAGGCGTCGGCATTCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACATCG--------------CTTTACCT---ACATAGTTTTCAACAAATAACCTTTAGTATACCCTTCTACTC-TACAAGTTAACAGAGAATAACGAGA-------------------------------ATA---ATTA--------------------ACATAGAAAAT-----------------TAT----------AAATTG-----------------GTTGGCCTTATGTTTTC---TTTTTCTGAATATAATCAATTGGAACCCTG----------A--TTTTA--AATTACATGT-------TTTATGCTTTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGGATTGGAATTTCATCATCCG------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCATC........2719.00900000012501000000
...................................................................................................................................................................................................................................TGGCCTTATGTTTTC---TTTTTCTGAA.............................................................................................................................................2517.00700000021220000000
........................................................................TC-TACAAGTTAACAGAGAATAACGAGA-------------------------------A........................................................................................................................................................................................................................................................................2815.00500000001040000000
.....................................................................................................................................................................................................................................................................................................................................TGCTCTATTTCACAGTGGCATAAACT.............................................2615.00500000011120000000
...........................................................................................................................................................................................................................................................................................................................................................................TGGAGTGGATTGGAATTTCATCATC........2514.00400000000220000000
..................................................................................................................................................................................................................................TTGGCCTTATGTTTTC---TTTTTCTGAA.............................................................................................................................................2613.00300000020010000000
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAGTGGATTGGAATTTCAT............2613.00300000000210000000
....................................................................................................................................TA---ATTA--------------------ACATAGAAAAT-----------------TAT----------AAATTG-----------------GT.........................................................................................................................................................................2813.00300000000030000000
..................................................................................TAACAGAGAATAACGAGA-------------------------------ATA---ATTA--------------------ACA........................................................................................................................................................................................................................................2813.00300000010020000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGGAA..................2812.00200000020000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCA..........2512.00200000000200000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTG.....................2512.00200000000010010000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGGAT.......................2612.00200000000101000000
............................................................................................TAACGAGA-------------------------------ATA---ATTA--------------------ACATAGAAAAT-----------------...............................................................................................................................................................................................................2612.00200000000020000000
...........................................................................................................................................TA--------------------ACATAGAAAAT-----------------TAT----------AAATTG-----------------GTTGGAA....................................................................................................................................................................2911.00100000010000000000
............................................................................................TAACGAGA-------------------------------ATA---ATTA--------------------ACATAGAAAAT-----------------TA.............................................................................................................................................................................................................2811.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGG....................2611.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................TGGCATAAACTTGGTCCCAGCTCTGGA.............................2711.00100000010000000000
...............................................................................................................................................................................................................................................TTC---TTTTTCTGAATATAATCAATTGG................................................................................................................................2611.00100000000010000000
..................................................................TTCTACTC-TACAAGTTAACAGAGA.................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................ATTGGAATTTCATCATC........1711.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGGATTGGA...................2711.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGTGGATTG.....................2711.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGGCATAAACTTGGTCCCAGCTCTGGAGTG..........................3011.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................GGTCCCAGCTCTGGAGTGGATTGGAA..................2611.00100000000010000000
....................................................CCTTTAGTATACCCTTCTACTC-TAC..............................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGGATTGGAATT................1911.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGGAATT................2911.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCATAAACTTGGTCCCAGCTCTGGA.............................2611.00100000000100000000
..........................................................................................................................................................................AT-----------------TAT----------AAATTG-----------------GTTGGCCT...................................................................................................................................................................1911.00110000000000000000
............................................................................................................................................................................................................................................................................................................................TGCTTTTCTTGCTCTATTTCACAGTGGCA...................................................2911.00100000000100000000
...........................................................................TACAAGTTAACAGAGAATAACGAGA-------------------------------.........................................................................................................................................................................................................................................................................2511.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGG....................2511.00100000000001000000
.......................................................................................................................................................................................................................................................................ATTGGAACCCTG----------A--TTTTA--AAT..................................................................................................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................ACAGTGGCATAAACTTGGTCCCAGC...................................2511.00100000000100000000
......G--------------CTTTACCT---ACATAGTTTTCAACAAA...........................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
...................................TAGTTTTCAACAAATAACCTTTAGTA...............................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGTGG.........................2311.00100000001000000000
........................................................................TC-TACAAGTTAACAGAGAATAACGAGA-------------------------------.........................................................................................................................................................................................................................................................................2711.00100000001000000000
.............................................................TACCCTTCTACTC-TACAAGTTAACAGA...................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................................TAGTTTTCAACAAATAACCTTTAGTATA.............................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.......................................................................................GAGAATAACGAGA-------------------------------ATA---ATTA--------------------ACA........................................................................................................................................................................................................................................2311.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGGATTGGAATTTCATCAT.........2611.00100000000000010000
..................................................................................................................................................................CATAGAAAAT-----------------TAT----------AAATTG-----------------GTTGGCC....................................................................................................................................................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................TACATGT-------TTTATGCTTTTCTTGCTCTA................................................................2711.00100000010000000000
...............................................................................................................................................................................................T----------AAATTG-----------------GTTGGCCTTATGTTTTC---TT.....................................................................................................................................................2611.00100000001000000000
......G--------------CTTTACCT---ACATAGTTTTCAACAA............................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGGA........................2511.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGGATTGGAA..................2711.00100000000000010000
...........................................................TATACCCTTCTACTC-TACAAGTTAACAGA...................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
...................................................................................................................................................................................................................................TGGCCTTATGTTTTC---TTTTTCTGAATATA.........................................................................................................................................2911.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATTGGAATTTCATCATCC.......1811.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGGAGTGGA........................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................TA--AATTACATGT-------TTT.................................................................................1570.14100000000001000000
droSec2
CACATAG--------------CTTTACCT---ACATAGTTTTCAACAAATAACCTTTAGTATACCCTTCTACTC-TACAAGTTAACAGAGAATATCGAGA-------------------------------ATA---ATTA--------------------ACAT-------------------------AT----------AAATTG-----------------GTTGGCCTTATGTTTTC---TTTTTCTGAATATAATCAATTGGAACCCTA----------A--TTTTA--AATTACATGT-------TTTATGCTATTCTTGCTCTATTTCACAGTGGGATAAACTTGGTCCCAGCTCTGGAGTGGATTGGAATTTCATCATCCG------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................C-TACAAGTTAACAGAGAATA..............................................................................................................................................................................................................................................................................................................2011.0010100
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGG..............................2111.0011000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGG.........................2111.0010010
dm3
TACATGAGCTACATTTTATCGTTT-------TACATACTTTTCAACAAATA------------ACCTTCTACTC-TACAAGTTA-C----------GA---GATATAGAAAAGA-----------------TAT---AGAA--------------------ATATAGAAAGT-----------------TAT----------AAATTG-----------------GTTGGCCCTATGTTTTC---TTGTTATAAATATAATACATTGGAACCCTT----------TTTTTTTT--AATTACATGT-------TTTATGCTTTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAGTGTATTGGAATTGCATCACCCG------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................TTTCTTGCTCTATTTCACAGT.......................................................21116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGTATTGGAATTGCATCACC........2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000102010000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTCCCAGCTCTGGAGTGT.........................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTCTGGAGTGTATTGGAATTGCATC...........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGT.........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGTATTGGAATTGCATC...........2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTCCCAGCTCTGGAG............................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAGTGTATTGGAATTGCA.............2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGCTCTGGAGTGTATTG.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATAAACTTGGTCCCAGCTCTGGAGTGT.........................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGGAGT...........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGTA........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CTCTGGAGTGTATTGGAATTGCATCACC........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGGAGTG..........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGTAT.......................2212.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAGTGTATTGGAATTGC..............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AGT-----------------TAT----------AAATTG-----------------GTTGGCCCT..................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGGCCCTATGTTTTC---TTGTTATAAATA...........................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATAATACATTGGAACCCT..........................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGGAGTGTA........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGCTCTGGAGTGTATTGG....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGTAT.......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGTATTGGAATTGCATCACCC.......2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000
......................................................................................................................................................................GAAAGT-----------------TAT----------AAATTG-----------------GTT........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................A------------ACCTTCTACTC-TACAAGTTA-C----------G...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGTATTG.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGGAGTGTATTGGAATTGCATC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTCTGGAGTGTATTGGA...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGTAT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGTATTGG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTC.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTACATTTTATCGTTT-------TACATACTTT...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TACATGAGCTACATTTTATCGTTT-------TACA.........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTGTATTG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGTATTGGAATTGCATCATT........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CCAGCTCTGGAGTGTATTGGAAT.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CATAAACTTGGTCCCAGCTCTGGAGTG..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................CCCAGCTCTGGAGTGTATTGG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CCAGCTCTGGAGTGTATTGGAATTGC..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAGTGTATTGGAATTG...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGCTCTGGAGTGTATTGGAA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGCTCTGGAGTGTATTGGAAT.................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAAACTTGGTCCCAGCTCTGG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACTTGGTCCCAGCTCTGGAGTGT.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGTATTGGAATTGCATCACCC.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTCCCAGCTCTGGAGTGTA........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATAATACATTGGAACCCTT----------TTTT...........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................C-TACAAGTTA-C----------GA---GATATAGAAAAGA-----------------.........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGTATTGGAA..................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATGCTTTTCTTGCTCTATTTCACAG........................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGCTCTGGAGTGTATTGGAATT................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................A------------ACCTTCTACTC-TACAAGTTA-.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GTGGCATAAACTTGGTCCC......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGTGT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GTCCCAGCTCTGGAGTGTATTGGAA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TT-------TACATACTTTTCAACAAATA------------ACC..........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAGCTCTGGAGTGTATTGGAA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTCCCAGCTCTGGAGTG..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGTATTGGAATTGC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTCCCAGCTCTGGAGT...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGTATTGGAATTGCATCACC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGTCCCAGCTCTGGAGTGTATTGGAAT.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCTGGAGTGTATTGGAATTGCA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAAGT-----------------TAT----------AAATTG-----------------GTTGGCC....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AACTTGGTCCCAGCTCTGGAGT...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATAAACTTGGTCCCAGCTCTGGA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAGTGGCATAAACTTGG..........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCATAAACTTGGTCCCAGCT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CCCAGCTCTGGAGTGTATTGGAATTGCC.............2811.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGTGTATTGGAATTGCATC...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATAATACATTGGAACCCTT----------...............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAGTGGCATAAACTTCCA.........................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droEre2
CGGAAACGTTC---------------CCTGTTTTATTCTTTTCAACGAAT-----CTAGTAAATCCT-TTATTC-TACGAGTAA-C----------GG---GTGT------AAA-----------------ATA---AATA----------------ATAAAAATATAAAAT------A--TGTATATAATCAAAAAAAAAAAAATGG-----------------TGTTGCCCTATATTGTGCCTTCCTGCTGAATATAATTACTTGGAACCCTT----------A--TT------------TGT-------AATACGTTGTTCTCGCTGTACTTCACAGTGGCATAAACTTGGTCCCAGCTCTGGAATTTATTGGAATCGCTTCACCCG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAATTTATTGGAATCGCT.............2512.0020000200
.............................................................................................................................................................................................................TGG-----------------TGTTGCCCTATATTGTGCCTTC.....................................................................................................................................................2511.0010001000
........................................................................................................................................................................................................................................CTATATTGTGCCTTCCTG..................................................................................................................................................1811.0010000100
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTCCCAGCTCTGGA.............................2111.0011000000
..................................................................................................................................................................................................................................................................................T----------A--TT------------TGT-------AATACGTTGTTCTCGCTG..................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................GGCATAAACTTGGTCCCAGCTCTGGA.............................2611.0011000000
......................................................................ATTC-TACGAGTAA-C----------GG---GT.....................................................................................................................................................................................................................................................................................................18200.0510000010
droYak3
ACAAAAAT-------------------------------------------------------------------------------------------------------AAA-----------------ACA---AATA----------------------A-------------------------TAT----------AAATTG-----------------TATGGGGCTATATTGTG---TCCTGCTGATTATGATCAGTTTGAACCCT----------------------------------------TACGCTGTTCTTGCTCTATTTCACAGTGGCATAAACTTGGTACCAGCTCTGGAGTTTATTGGAATCGCATCACCCG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................AGCTCTGGAGTTTATTGGAATCGC..............2411.00100000010000
.......................................................................................................................................................................................................................................................................GTTTGAACCCT----------------------------------------TACGCTGTTCTT......................................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................CTGGAGTTTATTGGAATCGCATCACC........2611.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................GGAGTTTATTGGAATCGCATC...........2111.00100000010000
.......................................................................................................................................................................................................................................................................GTTTGAACCCT----------------------------------------TACGCTGT..........................................................................1911.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................CTTGGTACCAGCTCTGGAG............................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................GGAGTTTATTGGAATCGCAT............2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................AAACTTGGTACCAGCTCTGGA.............................2111.00100100000000
..............................................................................................................................................................................................AT----------AAATTG-----------------TATGGGGCTATATTGT...........................................................................................................................................................2411.00100000010000
droEug1
CGGAAACGCTTCCTTCT--------ACCTGTTACATATTTTTCAACGAAT-----CAAGTATACCCTTTTACTC-TACGAGTAA-C----------GG---GT----------------------------ATA---TTTATTTGTAATTGTAAAACATACCCATACAAAAT------------------------------------------------------------------TTTC---A--------------------------------------------------------------------------------------------------------------------------TTTTTTGAAAAGAAACAAATGG------SizeHit CountTotal NormTotal
No Reads
droBia1
AACCTCTC--------------------------------------------------GTAT--------GCTT----AAGGAAACTAATAATCAAA----------------------------------AGAATTATTA--------------------CTGAAACAAA----------------------------------------------GTACCATCGTTTGCTTAATGTTTTC---CATTGT--TATAATATTTTTTAACATCG-ATTAACTAACTA--CTGCAACTAATACAAGTTTCTAATA----------ATTACGTTATTTTGCAGTGGAATAAACTTGGTTCCTGTTATGGATTTTCTTGGAATCGCGTCACCCA------SizeHit CountTotal NormTotal
No Reads
droTak1
CGGAAACGCTTCCTTCT--------AGCTGTTACATACTTTTGCACGAAT-----CTAGTATACCCTTTTACTC-TACGAGTAA-C----------GG---GTAT--------AACAATACACTGGGTAAAATA---ATTA--------------------TCT-------------------------TTC----------AAGTTG-----------------GTT--TCTAATGATTTA---CATTTG--TATAAAATATATTTAAGAAC-A----------T--TTTTA--AAATGCAATTTTATATTA-ATTA-AATTTTTGATCAATT-----------------------------------------------------ACA------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTCATCT-------------TTCTGACT---ACATTATAATCAACAAGC---------------------------------------------------------------------------------------------------------------------AAAACTATAATTTTCA------TTT----------AACTAT------------------------------------------------------------------------------------------------T-------TTTACGCTATTTTTT------CTTTCAGTGGAGTAAACTTGGTTCCCGTTCTGGAATATCTTGGAATAGGGTCACCTG------SizeHit CountTotal NormTotal
No Reads
droRho1
GAACAATA-----------------------------------------------------------------------------------------GGAAAAAC------AA-------------------------AT------------------------TAAAAAAT-----------------TAT----------AACTTT-----------------GTTGTTTTTAA-TTTTT---TTTTGCTCTTTGGGATTTGGTAACATTT--------------------------------------------------------------------------------------------TAATTTTATGGAATTACGGT-TTTA------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTATGAA-------------------------------------------------------------------------------------------A-------------------------------ATA---ATTA--------------------ACACAAAATAT-----------------TAT----------AA-------------------------------TATTTTT---TTTTACCTTCAATAAACAAT------------------------------------------------------------------------TATTTTTTTAAAAGTGAATTTTTTTCAAGATTTTTTTTGAATTTTTTCAG-AG------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTATCGAGCGGCATTAACTTTGTCCCTGTTCTGGAATGGCTCGGAATTGCCTCGTCTG------SizeHit CountTotal NormTotal
No Reads
droAna3
TTATT--TTTC-----------------------------------------------------CCATTTATTTATATAAATAAATATAAT--------------------AAT-----TCTAAA------AAT---ATTA--------------------AT-------------------------------------------ACTAAAAAATTA-------TTTTATT---------------------------------------------------------------------------------------------TCTTGTATTTTTCAGTGGTGTTAACATGATTTCCATTTTAGAGTTTCTTGGAGTTCCTCCTTCCG------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................ATTTTAGAGTTTCTTGGAGTT................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATGATTTCCATTTTAGAGT...........................1921.002010010
............................................................................................................................................................................................................................................................................................................................................................ACATGATTTCCATTTTAGAGT...........................2120.501000001
..................................................................................................................................................................................................................................................................................................................................................................................TCTTGGAGTTCCTCCTTCCG------2020.501100000
droBip1
AAATCACA-----------------------------------------------------------------------------------------AAT-------------------------------CT--------------------------------------------------------------------------------------------T-----CTTCTTTCTTT---ATTTTTTAAATGAAAAATATTTAAAATCCA----------T--TTTTA--AATTTCATAT-------TCTTTA-------------------------------------------------------------------ATTTT------SizeHit CountTotal NormTotal
No Reads
dp5
GTTTT--CCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTCAGTGGAATAAATTTGGTGCCCGTTCTGGAATTCCTCGGAATTACCTCAACTG------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................GTGCCCGTTCTGGAATTCCTC......................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................AGTGGAATAAATTTGGTGCC......................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................TGCCCGTTCTGGAATTCCTCGG....................2211.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................ATTCCTCGGAATTACCTCAAC........2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................GGAATAAATTTGGTGCCCGTT..................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................ATAAATTTGGTGCCCGTTCTGGA.............................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGTGCCCGTTCTGGAATTCCTCGGAA..................2811.0010010000000
droPer2
GTTTT--CCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTCAGTGGAATAAATTTGGTGCCCGTTCTGGAATTCCTCGGAATTACCTCAACTG------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................GCCCGTTCTGGAATTCCTCGGA...................2211.001001000
droWil2
AAAATAAA-------------------------------------------------------------------------------AAGGAAGAAA--------------AGA-----------------ACA---ATAA--------------------ACAAAGAAAAT-----------------TCT----------TAATCA-----------------ATTTCTTTTT---------------------------------------------------------------------T-------GGTTTG-------------------------------------------------------------------GTTTT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GAAAATAA---------------------------------------------------------------------------------------CGAAA-------------------------------ATG---CTTG--------------------TCATAAAAATT-----------------TAT----------CAAGGG-----------------TTAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------TTATGTT------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AATATCAA---------------------------------------------------------------------------------------------AAAT------AA-------------------------ATT-------------------------------------------------AT----------ATAATA-----------------AATGTAAATATTTTTTA---TTTTATTTTATTTATTTAATTAAAAAATTG----------A--TTTTA--AGTTTATTTT-------ATTTTA-------------------------------------------------------------------TTTTT------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTGCTTTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGCAGCGGCATAGACATGATGCCCGTTATGGAGTTCCTTGGCATTGAGGCGTCGGCATTCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:25 PM