ID:

dsi_7103

 Coordinate:

2r:20321425-20321574 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.4 -8.4 -8.0

Flybase annnotation

exon [2r_20321575_20321863_-]; five_prime_UTR [2r_20321575_20321863_-]; intron [2r_20321133_20321574_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTGCGAAGTGACACGTGTGTGAATCTCATAAGCGGAGCGATTTGGCCAGGGTAACAGCCTATCATAGTAATGCAAAATTCCAGCATATTCTCCGACCCGATCCGCACAATCCGATCCCAAGTTGGCGCGATAACTGCGCGACTATAGTGGCCAGTCCGGGCCCGATCAGAAGTGCCTGAAATCGGGGAATTAGCATGTAGCACCTGTGTATGTGCGTATGTTGGAAAGTACCCGTGAGCCGAGTGCCGTG
****************************************************..................((...................(((((..((((..........))))....)))))))*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 O002
Head
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR902008
ovaries
.............................................................................................................TCCGATCCCAAGTTGGCG........................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................CTCATAAGCGGAGCGATTTGGCCAGGGC...................................................................................................................................................................................................... 28 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................TGTGAATCTCATAAGCGGAGC.................................................................................................................................................................................................................... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 1 0 0
.TGCGAAGTGACACGTGTGTGAATCTC............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................CGGAGCGATTTGGCCAGGGTA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................AACAGCCTATCATAGTAATG.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................GCGGAGCGATTTGGCCAGGGTA..................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.........GACACGTGTGTGAATCTCATA............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............GTGTGTGAATCTCATAAGCG........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................ATGTTCTCCGACCCGATCCG.................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TGTGTGAATCTCATAAGCGGA...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................AGCGATTTGGCCAGG........................................................................................................................................................................................................ 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGTTGGAAAGTACCCGTGA............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................GGAGCGATTTGGCCAGGGTA..................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACAATCCGATCCCAAGTTGGCG........................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................CGCGACTATAGTGGCCAG................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GACCCGATCCGCACAATCC.......................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGTTGGAAAGTACCCGTGAGC........... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................AGCGATTTGGCCAGGGT...................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................CAGGGTAACAGCCTATCATAG....................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................GTGAATCTCATAAGCGGAGCGA.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............CGTGTGTGAATCTCATAAG.......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTGCGTATGTTGGAAAGT..................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................TGTAATCCGGGTATTAGCAT...................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................AGCGGAACGATTTGG............................................................................................................................................................................................................. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TGGAAAGTAGCCGTGAT............ 17 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................ATAAGCGGAACGATT................................................................................................................................................................................................................ 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................AAAGCGGAACGATTTGG............................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CACGCTTCACTGTGCACACACTTAGAGTATTCGCCTCGCTAAACCGGTCCCATTGTCGGATAGTATCATTACGTTTTAAGGTCGTATAAGAGGCTGGGCTAGGCGTGTTAGGCTAGGGTTCAACCGCGCTATTGACGCGCTGATATCACCGGTCAGGCCCGGGCTAGTCTTCACGGACTTTAGCCCCTTAATCGTACATCGTGGACACATACACGCATACAACCTTTCATGGGCACTCGGCTCACGGCAC
***************************************************************************************************************************..................((...................(((((..((((..........))))....)))))))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 M025
embryo
 GSM343915
embryo
........................................................................................................GTGGCAGGCTAGGGATCA................................................................................................................................ 18 3 15 2.07 31 0 0 0 0 0 26 0 3 1 0 1 0 0 0
..................................................................................................CTAGGCGTGTTAGGCTAGGGTT.................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AGGTCGTATAAGAGGCTGGGCTAG.................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTGTCGGATAGTATCATTAC.................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GCGTGTTAGGCTAGGGTT.................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........ACTGTGCACACACTTAGAGT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................TCCCATTGTCGGATAGTATCAT..................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGGCTGGGCTAGGCGTGTT............................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CCATGGGTACTCGGCTCA...... 18 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................AAGAGGCTGGGCTAGGCGTG............................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAAGAGGCTGGGCTAGGCGTGT.............................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................CCGGTCCCATTGTCGGATAGTA......................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CTAGGCGTGTTAGGCTAGGCT................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CCGGGCTAGTCTTCACGGACT....................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGGCCCGGGCTAGTCTTCAC............................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGTCGGATAGTATCATTA................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTGTTAGGCTAGGGTTCAAC.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TAAGAGGCTGGGCTAGGCGTG............................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GGCGTGTTAGGCTAGGGTTC................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TTAAGGTCGTATAAGAGGCTGGGCTA..................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCCGTTGTCGGGTAGTATCATT.................................................................................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGTCAGGCCCGGGCTAGTCTT............................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................GTCGTATAAGAGGCTGGGCTA..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CGTATAAGAGGCTGGGCTAGGC.................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................TCCCATTGTCGGATAGTATCATT.................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................GGCTAGGCGTGTTAGGCTA....................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................CCATTGTCGGGTAGTATCATT.................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGGCTAGGGATCAGCCGT........................................................................................................................... 18 3 20 0.65 13 0 0 0 0 0 0 0 11 1 0 1 0 0 0
.............................................................................................................AGGCTAGGGATCAGCCG............................................................................................................................ 17 2 9 0.33 3 0 0 2 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................TGTTGGGCTAGGGATCA................................................................................................................................ 17 2 10 0.20 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0
..................................................................................................................................................................................................................................TCATGGCCAATCGACTCAC..... 19 3 15 0.20 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0
.................................................................TCATTAGGTTCTAACGTCGT..................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................GTGCTGGGCTAGGGATCAA............................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................ACCGGTCAGGCACGG........................................................................................ 15 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................GGCTAGGGATCATCCG............................................................................................................................ 16 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................GTGGTAGGCTAGGGATC................................................................................................................................. 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................CTAGGCTTCAGCCGCGTTA....................................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................CAGGCTAGGGATCAGCCG............................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................GGGTACTCGGCTCACTTCA. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................ACGGTTCAACCGCGATAGT..................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20321375-20321624 - dsi_7103 GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------TATCATAGTAATGCAA--AATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTG
droSec2 scaffold_9:3104552-3104801 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------TATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGTCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTG
dm3 chr2R:19820582-19820831 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------CATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCTAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TTTAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTG
droEre2 scaffold_4845:21193340-21193589 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------CATCATAGTAATGCAA--TGTTCCAGCATATTCTCCGAC----------CTGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TGTAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTAGC-------------------------------------------CGTGAGCCGAGTA-CCGTG
droYak3 2R:19798114-19798374 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCCCCCAACCAGACCATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CTGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGGCCAGTTCGG--------------------------GCCCGATCAGAAGTGACCGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTA-CCGTG
droEug1 scf7180000409464:193671-193889 - GT-----------TC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTCCAGC-----------CGATCTAACGCGAT-----------------------CCGAACCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAT-TAATAGTGGCCAGGC------------------------------------CAGAAGTATCTGA--AATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGA---------------------------------------AAAGTGCC-------------------------------------------CGTG-------TA-CTGTG
droBia1 scf7180000302143:345843-346108 - TT-----------GC-GAAGTGACA------CGTGTGTGAATCTCAT--------------TCGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTGCGACTCCAGGCGCTCCGATCCACTGCGAT-----------------------CCCGGCCAAAGTTGGCGC--------T---------------------CTAACTGCG--AATTG--CGCGAC-TTGCAGGGGCC-----------------------------------------AGAAGTGTCTGA--GATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC----CCATGTATGTTGG---------------------------------------AAAGTGCCTGTGCCAGTGCCAGTGCC-AGTGCCCGTGCCCGTGCCAGTGCCCGT-------GTG-CCGTG
droTak1 scf7180000415878:940992-941212 - TT----------TGC-GAAGTGACA------CGTGTGTGAATCTCAT--------------TTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTTCGAT----------CT-----ATGGCGATCCCATACGATACGATACGATAAA-CCATCCAAAGTTGGCGCTATAGCGCT---------------------ATAACTGC-----------GC--------------C-----------------------------------------AGAAGTATCTGG-GGATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC----CCATGTATGTTGG---------------------------------------AAAGTGCC-------------------------------------------CGTG-------TT-CCGTG
droEle1 scf7180000491214:5264445-5264680 + GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAGAGCGATTTGGCCA------------GGGTAA---------------------TGCTAATGCAAT-TATTCCAGCATATTCTCTAAT-----CCGCACCGATCCGATCCAAT-----------------------CGAATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGATTTAATAGTGGCC-----------------------------------------CGAAGTATCTG-AA--------AATTAGCATGTAG---------CA------CCTGTGTATGTGC----ACCTCTATTT-------------------------------------------------C-----TATTTCTATTACTATTTCCA-------------ATTCCCCT-------------GTG
droRho1 scf7180000777217:10334-10518 + GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTCTAAT----------CCG----------AT-----------------------CCAATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGACTTAATAGTGGCC-----------------------------------------CGAAGTATCTG-AA--------AATTAGCATATAG---------CT------CCTGTGTATGTGC--------ACAT------------------------------------------------TTCC-------------------------------------------CGTG-------------TG
droFic1 scf7180000453858:1557409-1557626 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCAA------------GGGTAA---------------------------TCCCAT-CATTCCAGCATATTCTCTTAG-----TCGGTCTGATCCGTCCCGAT-----------------------CCCATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCTATTTTATAGTGGCCAG-----------------------------------------AA-TCACT---------GGAAATTAGCATATAG---------CA------CCTGTGTATGTGA----CCATGTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGTGC-------ACATG
droKik1 scf7180000302355:403120-403367 - GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAGGCGAAG--CGGA--GA-----CGGGCGCCCAGGGTAA---------------------------TGCCAA-TGTTCCAGCATGTTCTCCGGA----------CGGAAGGG-GGCAAA----------ACGAGACGGGGGTCCAGTCCGGA----------------G---------------------ATAACTACGTCAATTGGCCGCGTT-TAATAGTGGCCAG---------------------------------------AAAAGTGCCTGCAA--------AATTTGCATATTA---------CG------CTTGTATGT--AC----CCGTGCCCGT-----------------------------------------------GCC-------------------CGTGCCCGTACTCGTACCTGTGCCCGT---------GCCAGTG
droAna3 scaffold_13266:5685330-5685594 - GGACTCGCAAAGTGC-AAAGTGACACGTACACGTGTGCGAATCTCATAAGCGGAG-GAGATTAGGCCAGTCGGGCGCCCAGGGTAA---------------------------TGCGATTTATTCCAGAATATTCTCCA---------------------------------------------------------------------------------GGGACAGTAGTTGTTTTATAACTACGTCAATTGGCCGCATT--TATAGTGGCC-----------------------------------------AAAAGTGCCTACAA--------AATTAGCATAGTG---------CC------CCTGTGTATGTGC--------GTATGATGAAAAAAAAAAATTGAGAGAGAAAAAAAAAATGAAAAATGAAAAGTACC-------------------------------------------CGTG-------------TG
droBip1 scf7180000396372:299689-299933 - GGACTCGCAAAGTGC-AAAGTGACACGTACACGTGTGCGAATCTCATAAGCGGAG-GAGATTAGGCCAGTCGGGCGCCCAGGGTAA---------------------------TGCGAT-TATTCCAGAATATTCCCCA---------------------------------------------------------------------------------GGGACAGTAGTGGTTTTATAACTACGTCAATTGGCCGCGTT--TATAGTGGCC-----------------------------------------AAAAGTGCCTGCAA--------AATTAGCATAGTG---------CC------CCTGTGTATGTGG--------GTATGCTGAAAAAAAAAAATTGA-------------------AAATGAAAAGTACC-------------------------------------------CGTG-------------TG
dp5 3:1762180-1762479 - GT----GCAAA--GC-AAAGTGACA------CGTGTGTGAATCTCATAAGTGGAG----ATTAGACTAGTCTGGCTTGAGCGGTAA---------------------------TGCCAA-TATTCTTACCAACTC-------------------------------------------------------------TTAATTAGTACTTA-----AATAATTGGTAATAGTTGCTCGACCACTAA-----------GCGTC--TCAACTGGTCCAT----ACCTCCCTCCCGCCCCTTTTCATTTACTTTGTCCA--AATGTCTA-AG--------AATTTGCATATTTACTTTACAGTAGAGATGTATGTGTATGTATGTACATATGTATGTTCA---------------------------------------GCCGTA----------------CATTATTTGCACATACTCGTATGTATGC-----------ATTCAGGTA
droPer2 scaffold_2:1949778-1950077 - GT----GCAAA--GC-AAAGTGACA------CGTGTGTGAATCTCATAAGTGGAG----ATTAGACTAGTCTGGCTTGAGCGGTAA---------------------------TGCCAA-TATTCTTACCAACTC-------------------------------------------------------------TTAATTAGTACTTA-----AATAATTGGTAATAGTTGCTCGACCACTAA-----------GCGTC--TCAACTGGTCCAT----ACCTCCCTCCCGCCCCTTTTCATTTACTTTGTCCA--AATGTCTA-AG--------AATTTGCATATTTACTTTACAGTAGAGATGTATGTGTATGTACGTACATATGTATGTTCA---------------------------------------GCCGTA----------------CATTATTTGCACATACTCGTATGTATGC-----------ATTCAGGTA
droWil2 scf2_1100000004514:1163608-1163644 + GT-----------AC-AAAGTGACA------CGTGTGTGAATCTCATAAGTCGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:11918289-11918325 + GG-----------CCAAAAGTGACA------CGTGTGTGAATCTCATAAGTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:14919204-14919240 + GG-----------GTAAAAGTGACA------CGTGTGTGAATCTCATAAGTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:11787916-11787948 - GA-----------GCAAAAGTGACA------CGTGTGTGAATCTCATAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------TATCATAGTAATGCAA--AATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................T-----------------------CCGATCCCAAGTTGGCG...........................................................................................................................................................................................................................................................................................................1812.00220000000000000000
..........................................CTCATAAGCGGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000000000000000
...................................TGTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001001000000000
.T-----------GC-GAAGTGACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..................................................CGGAG--CGATTTGGCCA------------GGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................AACAGCC-----------TATCATAGTAATG......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.................................................GCGGAG--CGATTTGGCCA------------GGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.....................GACA------CGTGTGTGAATCTCATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
................................GTGTGTGAATCTCATAAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.................................TGTGTGAATCTCATAAGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....................................................AG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGA..............2111.00110000000000000000
...................................................GGAG--CGATTTGGCCA------------GGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.................................................................................................................................................................ACAAT-----------------------CCGATCCCAAGTTGGCG...........................................................................................................................................................................................................................................................................................................2211.00100100000000000000
....................................................................................................................................................................................................................................................C-----------GCGAC--TATAGTGGCCAG......................................................................................................................................................................................................................................1811.00100001000000000000
..........................................................................................................................................GAC----------CCGATCCG-CACAAT-----------------------CC..........................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGC............2311.00100000000010000000
.....................................................AG--CGATTTGGCCA------------GGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..................................................................CA------------GGGTAACAGCC-----------TATCATAG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
....................................GTGAATCTCATAAGCGGAG--CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................CGTGTGTGAATCTCATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTGC--------GTATGTTGG---------------------------------------AAAGT.................................................................1811.00100000010000000000
droSec2
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------TATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGTCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............GC-GAAGTGACA------CGTGTGTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................CTGTGTATGTGC--------GTATGTTGG---------------------------------------......................................................................2111.0011000
...........................................................................................................................................AC----------CCGATCCG-CACAAT-----------------------CCGAT.......................................................................................................................................................................................................................................................................................................................2111.0010001
.............GC-GAAGTGACA------CGTGTGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................CATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................TGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGC............2111.0010100
.T-----------GC-GAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................CAAT-----------------------CCGATCCCAAGTTGGC............................................................................................................................................................................................................................................................................................................2011.0010100
GT-----------GC-GAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.....................GACA------CGTGTGTGAATCTCATAAGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
....................................GTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.T-----------GC-GAAGTGACA------CGTGTGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................................................................................................................................................................................................AGAAGTGCCTGA--AATCGGGGA........................................................................................................................................................................2111.0010010
.....................................................AG--CGATTTGGCCA------------GGGTAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
........................A------CGTGTGTGAATCTCATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.............................................ATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............................................CATAAGCGGAG--CGATTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------CATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CCGATCCG-CACAAT-----------------------CCGATCCTAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TTTAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................GAAGTGACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCTCATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000100000000000
..................................................CGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000
.............GC-GAAGTGACA------CGTGTGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATAAGCGGAG--CGATTTGGCCA------------GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000102000
.......................CA------CGTGTGTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GTGAATCTCATAAGCGGAG--CGATTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGCGGAG--CGATTTGGCCA------------GGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............C-GAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATAAGCGGAG--CGATTTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................GCGGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CA------CGTGTGTGAATCTCATAAGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................CTCATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................AATTAGCATGTAG---------CA------CCTGTGTATGTG...............................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................C--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGC............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
................................................................................................................................................................................................................................................ACTGC-----------GCGAC--TTTAGTGGCC........................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AAGTGCCTGA--AATCGGGGAAT......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000
................................................AGCGGAG--CGATTTGGCCA------------GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACC-------------------------------------------CGTGAGCCGAGTG-CCGT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............C-GAAGTGACA------CGTGTGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................GCCTGA--AATCGGGGAATTAGCC.................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACA------CGTGTGTGAATCTCATAAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GTGAATCTCATAAGCGGAG--................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................................................GG--------------------------GCCCGATCAGAAGTGCC......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GCCCGATCAGAAGTGCCTGA--AATCGG...........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................AATCTCATAAGCGGAG--CGATTTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTGACA------CGTGTGTGAATCTCATAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACC-------------------------------------------CGTGAGCCGAG........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
GT-----------GC-GAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTG-C....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................CA------CGTGTGTGAATCTCATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTCATAAGCGGAG--CGATTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGAATCTCATAAGCGGAG--CGATTTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AG--CGATTTGGCCA------------GGGTAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................A------CCTGTGTATGTGC--------GTATGTTG..............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTGTGTGAATCTCATAAGCGGAG--CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGCGGAG--CGATTTGGCCA------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................CATAAGCGGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............GC-GAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................GAATCTCATAAGCGGAG--CGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................TAAGCGGAG--CGATTTGGCCA------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATAAGCGGAG--CGATTTGGCCA------------GGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CATAAGCGGAG--CGATTTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CATAAGCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................TAACAGCC-----------CATCATAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCGGAG--CGATTTGGCCA------------GGGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GGAG--CGATTTGGCCA------------GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................CATAAGCGGAG--CGATTTGGCCA------------GGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGTGCCTGA--AATCGGGGAAT......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................ATAAGCGGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................AAGTGACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATAAGCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
................................................................................................................................................................................................................................................................................................................................................................................TGTGTATGTGC--------GTATGTTGG---------------------------------------......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................ATTAGCATGTAG---------CA------CCTGTG.....................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
................GAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................GTGTGAATCTCATAAGCGGAG--CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTGTGTGAATCTCATAAGCGGAG--CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGTGAATCTCATAAGCGGAG--A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGTGAATCTCATAAGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AATTAGCATGTAG---------CA------CCTGTG.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AGCATGTAG---------CA------CCTGTGTATG.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGTGTGAATCTCATAAGCGGAG--CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCCTGA--AATCGGGGAATTAGC..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................CA------CGTGTGTGAATCTCATAAGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CA------CGTGTGTGAATCTCATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTGTGTGAATCTCATAAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATCTCATAAGCGGAG--CGATTTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACC-------------------------------------------CGTGAGCCGAGTG-CCGTG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GC-GAAGTGACA------CGTGTGTGAATCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCGG--------------------------GCCCGATCAGAAGTGCCTGA--A................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AG---------CA------CCTGTGTATGTGC--------GTATGTT...............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGAATCTCATAAGCGGAG--CGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGCGGAG--CGATTTGGCCA------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................ATCTCATAAGCGGAG--CGATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TAAGCGGAG--CGATTTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................AT-----------------------CCGATCCTAAGTTGGCG...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................GAG--CGATTTGGCCA------------GGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................AAGCGGAG--CGATTTGGCCA------------GGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGC-----------GCGAC--TTTAGTGGCCAGTCCG..................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGTGTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGTGACA------CGTGTGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................TCTCATAAGCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................AC--TTTAGTGGCCAGTCCG..................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGAATCTCATAAGCGGAG--CGATTTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................C--TTTAGTGGCCAGTCCGG--------------------------GC.....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATCGGGGAATTAGCATGTAG---------C..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................GACA------CGTGTGTGAATCTCATAAGCGGAG--................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATAAGCGGAG--CGATTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................GAAGTGACA------CGTGTGTGAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................TAAGCGGAG--CGATTTGGCCA------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................ATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GATTTGGCCA------------GGGTAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................TATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CG.................2611.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GT-----------GC-GAAGTGACA------CGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................AAGTGACA------CGTGTGTGAATCTCATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GTAACAGCC-----------CATCATAGTAATGCAA--.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGTGACA------CGTGTGTGAATCTCATAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TCGGGGAATTAGCATGTAG---------CA------...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GTATGTGC--------GTATGTTGG---------------------------------------A.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................GTGTGTGAATCTCATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................A------CGTGTGTGAATCTCATAAGCGGAG--................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................CGGAG--CGATTTGGCCA------------GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCC-----------CATCATAGTAATGCAA--TGTTCCAGCATATTCTCCGAC----------CTGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TGTAGTGGCCAGTCCGG--------------------------GCCCGATCAGAAGTGCCTGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTAGC-------------------------------------------CGTGAGCCGAGTA-CCGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................AC--TGTAGTGGCCAGTCCGG--------------------------GC.....................................................................................................................................................................................................2111.0011000000
............................................CATAAGCGGAG--CGATTTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................CATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
.............................................................................................................................................................................................................................................................................................................................AGTGCCTGA--AATCGGGGA........................................................................................................................................................................1811.0010000010
........................................ATCTCATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
GT-----------GC-GAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..........................................................................................................ATAGTAATGCAA--TGTTCCAG.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.....................GACA------CGTGTGTGAATCTCATAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
......................................GAATCTCATAAGCGGAG--CGATTTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................CATAAGCGGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................................................................CAAT-----------------------CCGATCCCAAGTTGGC............................................................................................................................................................................................................................................................................................................2011.0011000000
.............GC-GAAGTGACA------CGTGTGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
....................................................................................................................................................................................................................................................................................................................................................AGCATGTAG---------CA------CCTGTGTATG.................................................................................................................................2111.0010000010
................................................AGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................CATGTAG---------CA------CCTGTGTATGTG...............................................................................................................................2111.0011000000
......................................GAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.............GC-GAAGTGACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
droYak3
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAACAGCCCCCAACCAGACCATCATAGTAATGCAA--TATTCCAGCATATTCTCCGAC----------CTGATCCG-CACAAT-----------------------CCGATCCCAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAC--TATAGTGGCCAGTTCGG--------------------------GCCCGATCAGAAGTGACCGA--AATCGGGGAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCCGAGTA-CCGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................GGAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200100010000
GT-----------GC-GAAGTGACA------CGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................................................C--------G---------------------ATAACTGC-----------GCGAC--TATAGTGGCC........................................................................................................................................................................................................................................2511.00100000010000
.....................GACA------CGTGTGTGAATCTCATAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.............GC-GAAGTGACA------CGTGTGTGAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000
..........................................CTCATAAGCGGAG--CGATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
....................................GTGAATCTCATAAGCGGAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....................................................GAG--CGATTTGGCCA------------GGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
................GAAGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.T-----------GC-GAAGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGAGCC...........2111.00100100000000
..............................................TAAGCGGAG--CGATTTGGCCA------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................A------CGTGTGTGAATCTCATAAGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................GACCGA--AATCGGGGAATTAGC..................................................................................................................................................................2111.00100000010000
..............................................TAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................ATCTCATAAGCGGAG--CGATTTGGCCA------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..................................GTGTGAATCTCATAAGCGGAG--CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................GAAGTGACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................AACTGC-----------GCGAC--TATAGTG...........................................................................................................................................................................................................................................1811.00101000000000
.......................................................................................................................................................................................................................G---------------------ATAACTGC-----------GCGAC--TATAGTGGCC........................................................................................................................................................................................................................................2411.00100000010000
............................................CATAAGCGGAG--CGATTTGGCCA------------GGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
GT-----------TC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTCCAGC-----------CGATCTAACGCGAT-----------------------CCGAACCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGAT-TAATAGTGGCCAGGC------------------------------------CAGAAGTATCTGA--AATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC--------GTATGTTGA---------------------------------------AAAGTGCC-------------------------------------------CGTG-------TA-CTGTGSizeHit CountTotal NormTotal
No Reads
droBia1
TT-----------GC-GAAGTGACA------CGTGTGTGAATCTCAT--------------TCGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTGCGACTCCAGGCGCTCCGATCCACTGCGAT-----------------------CCCGGCCAAAGTTGGCGC--------T---------------------CTAACTGCG--AATTG--CGCGAC-TTGCAGGGGCC-----------------------------------------AGAAGTGTCTGA--GATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC----CCATGTATGTTGG---------------------------------------AAAGTGCCTGTGCCAGTGCCAGTGCC-AGTGCCCGTGCCCGTGCCAGTGCCCGT-------GTG-CCGTGSizeHit CountTotal NormTotal
No Reads
droTak1
TT----------TGC-GAAGTGACA------CGTGTGTGAATCTCAT--------------TTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTTCGAT----------CT-----ATGGCGATCCCATACGATACGATACGATAAA-CCATCCAAAGTTGGCGCTATAGCGCT---------------------ATAACTGC-----------GC--------------C-----------------------------------------AGAAGTATCTGG-GGATCTGAAAATTAGCATGTAG---------CA------CCTGTGTATGTGC----CCATGTATGTTGG---------------------------------------AAAGTGCC-------------------------------------------CGTG-------TT-CCGTGSizeHit CountTotal NormTotal
No Reads
droEle1
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAGAGCGATTTGGCCA------------GGGTAA---------------------TGCTAATGCAAT-TATTCCAGCATATTCTCTAAT-----CCGCACCGATCCGATCCAAT-----------------------CGAATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGATTTAATAGTGGCC-----------------------------------------CGAAGTATCTG-AA--------AATTAGCATGTAG---------CA------CCTGTGTATGTGC----ACCTCTATTT-------------------------------------------------C-----TATTTCTATTACTATTTCCA-------------ATTCCCCT-------------GTGSizeHit CountTotal NormTotal
No Reads
droRho1
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCCA------------GGGTAA---------------------------TGCAAT-TATTCCAGCATATTCTCTAAT----------CCG----------AT-----------------------CCAATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCGACTTAATAGTGGCC-----------------------------------------CGAAGTATCTG-AA--------AATTAGCATATAG---------CT------CCTGTGTATGTGC--------ACAT------------------------------------------------TTCC-------------------------------------------CGTG-------------TGSizeHit CountTotal NormTotal
No Reads
droFic1
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAAGCGGAG--CGATTTGGCAA------------GGGTAA---------------------------TCCCAT-CATTCCAGCATATTCTCTTAG-----TCGGTCTGATCCGTCCCGAT-----------------------CCCATCCAAAGTTGGCGC--------G---------------------ATAACTGC-----------GCTATTTTATAGTGGCCAG-----------------------------------------AA-TCACT---------GGAAATTAGCATATAG---------CA------CCTGTGTATGTGA----CCATGTATGTTGG---------------------------------------AAAGTACC-------------------------------------------CGTGTGC-------ACATGSizeHit CountTotal NormTotal
No Reads
droKik1
GT-----------GC-GAAGTGACA------CGTGTGTGAATCTCATAGGCGAAG--CGGA--GA-----CGGGCGCCCAGGGTAA---------------------------TGCCAA-TGTTCCAGCATGTTCTCCGGA----------CGGAAGGG-GGCAAA----------ACGAGACGGGGGTCCAGTCCGGA----------------G---------------------ATAACTACGTCAATTGGCCGCGTT-TAATAGTGGCCAG---------------------------------------AAAAGTGCCTGCAA--------AATTTGCATATTA---------CG------CTTGTATGT--AC----CCGTGCCCGT-----------------------------------------------GCC-------------------CGTGCCCGTACTCGTACCTGTGCCCGT---------GCCAGTGSizeHit CountTotal NormTotal
No Reads
droAna3
GGACTCGCAAAGTGC-AAAGTGACACGTACACGTGTGCGAATCTCATAAGCGGAG-GAGATTAGGCCAGTCGGGCGCCCAGGGTAA---------------------------TGCGATTTATTCCAGAATATTCTCCA---------------------------------------------------------------------------------GGGACAGTAGTTGTTTTATAACTACGTCAATTGGCCGCATT--TATAGTGGCC-----------------------------------------AAAAGTGCCTACAA--------AATTAGCATAGTG---------CC------CCTGTGTATGTGC--------GTATGATGAAAAAAAAAAATTGAGAGAGAAAAAAAAAATGAAAAATGAAAAGTACC-------------------------------------------CGTG-------------TGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................GTGCGAATCTCATAAGCGGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000020
.................................................................................................................................................................................................................................................................................................................................................................................GTGTATGTGC--------GTATGATGAAAAAA........................................................................................................2412.002000002
...CTCGCAAAGTGC-AAAGTGACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......GCAAAGTGC-AAAGTGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................................GTGCGAATCTCATAAGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
....................................GCGAATCTCATAAGCGGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................................................GATTAGGCCAGTCGGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................AGCGGAG-GAGATTAGGCCAGTCGGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
........................................ATCTCATAAGCGGAG-GAGATTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..........................................................GATTAGGCCAGTCGGGCGCCCAGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
......................................GAATCTCATAAGCGGAG-GAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................GAGATTAGGCCAGTCGGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................TTAGGCCAGTCGGGCGCCCAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................GAG-GAGATTAGGCCAGTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................TGCGAATCTCATAAGCGGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................ATAAGCGGAG-GAGATTAGGCCAGTCGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
droBip1
GGACTCGCAAAGTGC-AAAGTGACACGTACACGTGTGCGAATCTCATAAGCGGAG-GAGATTAGGCCAGTCGGGCGCCCAGGGTAA---------------------------TGCGAT-TATTCCAGAATATTCCCCA---------------------------------------------------------------------------------GGGACAGTAGTGGTTTTATAACTACGTCAATTGGCCGCGTT--TATAGTGGCC-----------------------------------------AAAAGTGCCTGCAA--------AATTAGCATAGTG---------CC------CCTGTGTATGTGG--------GTATGCTGAAAAAAAAAAATTGA-------------------AAATGAAAAGTACC-------------------------------------------CGTG-------------TGSizeHit CountTotal NormTotal
No Reads
dp5
GT----GCAAA--GC-AAAGTGACA------CGTGTGTGAATCTCATAAGTGGAG----ATTAGACTAGTCTGGCTTGAGCGGTAA---------------------------TGCCAA-TATTCTTACCAACTC-------------------------------------------------------------TTAATTAGTACTTA-----AATAATTGGTAATAGTTGCTCGACCACTAA-----------GCGTC--TCAACTGGTCCAT----ACCTCCCTCCCGCCCCTTTTCATTTACTTTGTCCA--AATGTCTA-AG--------AATTTGCATATTTACTTTACAGTAGAGATGTATGTGTATGTATGTACATATGTATGTTCA---------------------------------------GCCGTA----------------CATTATTTGCACATACTCGTATGTATGC-----------ATTCAGGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................CTCATAAGTGGAG----ATTAGACTAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........AA--GC-AAAGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................ATTAGACTAGTCTGGCTTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................TTTACAGTAGAGATGTATGTGTATGTATG.............................................................................................................................2911.0010000001000
....................................................GAG----ATTAGACTAGTCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
................AAAGTGACA------CGTGTGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
..................................GTGTGAATCTCATAAGTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............GC-AAAGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................TTTACTTTGTCCA--AATGTC......................................................................................................................................................................................1911.0010100000000
.....................GACA------CGTGTGTGAATCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000000
.............................................ATAAGTGGAG----ATTAGACTAGTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................GACA------CGTGTGTGAATCTCATAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...............................................................GACTAGTCTGGCTTGAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................GAG----ATTAGACTAGTCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
............................................CATAAGTGGAG----ATTAGACTAGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..........................................................................................................................................................................................................................................................................ACTGGTCCAT----ACCTCCCTCCC......................................................................................................................................................................................................................2111.0010100000000
droPer2
GT----GCAAA--GC-AAAGTGACA------CGTGTGTGAATCTCATAAGTGGAG----ATTAGACTAGTCTGGCTTGAGCGGTAA---------------------------TGCCAA-TATTCTTACCAACTC-------------------------------------------------------------TTAATTAGTACTTA-----AATAATTGGTAATAGTTGCTCGACCACTAA-----------GCGTC--TCAACTGGTCCAT----ACCTCCCTCCCGCCCCTTTTCATTTACTTTGTCCA--AATGTCTA-AG--------AATTTGCATATTTACTTTACAGTAGAGATGTATGTGTATGTACGTACATATGTATGTTCA---------------------------------------GCCGTA----------------CATTATTTGCACATACTCGTATGTATGC-----------ATTCAGGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................G----ATTAGACTAGTCTGGCTTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2317.007700000
......................................................G----ATTAGACTAGTCTGGCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
...................................................GGAG----ATTAGACTAGTCTGGCTTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003300000
..............................................................AGACTAGTCTGGCTTGAGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
............................................CATAAGTGGAG----ATTAGACTAGTCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
....................................GTGAATCTCATAAGTGGAG----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.........AA--GC-AAAGTGACA------CGTGTGTGAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................CACTAA-----------GCGTC--TCAACTGGTCCAT----ACCT.............................................................................................................................................................................................................................2811.001100000
.....................................................AG----ATTAGACTAGTCTGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............C-AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...............................................................GACTAGTCTGGCTTGAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................TAAGTGGAG----ATTAGACTAGTCTGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
..............................................................AGACTAGTCTGGCTTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................ATAAGTGGAG----ATTAGACTAGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................................................G----ATTAGACTAGTCTGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................ATAAGTGGAG----ATTAGACTAGTCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................ATAAGTGGAG----ATTAGACTAGTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droWil2
GT-----------AC-AAAGTGACA------CGTGTGTGAATCTCATAAGTCGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
GT-----------AC-AAAGTGACA------CGTGTGTGAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300030
GT-----------AC-AAAGTGACA------CGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
GT-----------AC-AAAGTGACA------CGTGTGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
GT-----------AC-AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020
..............C-AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................AAGTGACA------CGTGTGTGAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.T-----------AC-AAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............AC-AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
................AAAGTGACA------CGTGTGTGAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
GT-----------AC-AAAGTGACA------CGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
droVir3
GG-----------CCAAAAGTGACA------CGTGTGTGAATCTCATAAGTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............AAAAGTGACA------CGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000010000000000100000000000000000000000000
...............................CGTGTGTGAATCTCATAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000001000000000010000000000000000000000000000000000
.G-----------CCAAAAGTGACA------CGTGTGTGAATCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
..................AGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000100000000000000000000000
....................TGACA------CGTGTGTGAATCTCATAAGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.....................GACA------CGTGTGTGAATCTCATAAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
................AAAGTGACA------CGTGTGTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
GG-----------GTAAAAGTGACA------CGTGTGTGAATCTCATAAGTCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............GTAAAAGTGACA------CGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............GTAAAAGTGACA------CGTGTGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
GA-----------GCAAAAGTGACA------CGTGTGTGAATCTCATAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:55 PM