ID:

dsi_6998

 Coordinate:

2r:12084255-12084404 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.8 -5.5 -5.5 -5.5

Flybase annnotation

exon [2r_12084405_12084521_-]; five_prime_UTR [2r_12084405_12084521_-]; intron [2r_12083675_12084404_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAAAATCAAAATTGAAGTGAAACCAAGTGCGAAAACGAAGGAGCTAAAGGTGCGGTCAAACGATAAGCAGACTCCAAATGAAAACCGCGCGAGTGTGCAGCCAAAATAGGCCCCCATTTGTGTTGCTCCCCCCGAAGGAAAAAGAGCCATAAAAATCGATTCTTCAAAGAAGTCGCACACTACGTTCGAGACTTTTTTGCGCGGGCGGTGGAGCCTGGCGTTGCTTTTCGCCAACTTTTCGTGGAGCTC
**********************************************************************************************************************************......((..................((((..........................))))..))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M023
head
 O001
Testis
 O002
Head
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
..................................................................................................................................CCCCGAAGGAAAAAGAGCCATAA................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.............TGAAGTGAAACCAAGTGCGAAAACGA................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................CACACTACGTTCGAGACTTTTTTGCGC............................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................CACACTACGTTCGAGACT........................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................GTGTTGCTCCCCCCGAAGGAA............................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................ATCGATTCTTCAAAGAAGT............................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................GTGAAACCAAGTGCGAAAACGAAGGAG.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................GTGTTGCTCCCCCCGAAGG............................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................TTAAGGTGCGGTAAAACG........................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................AGACTTTGTTTCGCGGACGG......................................... 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0
............................................TTAAAGGTGCGGTAAAACGC.......................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................TGGCTCACCCAGAAGGAAAAA.......................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0
.......................................................GTTAAACGATAAGCAGAT................................................................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................GTTCGAGACTCTTCTGC................................................. 17 2 10 0.10 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................GGCGTTGGAGCCGGGCGTGG.......................... 20 3 17 0.06 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................GCCTGGCGTTGGTTGTC.................... 17 2 18 0.06 1 0 0 0 0 0 0 0 0 1
..............GAAGAGAAACCAATTGCGAT........................................................................................................................................................................................................................ 20 3 19 0.05 1 0 0 0 0 0 0 0 0 1
...........................................................................................................................TGGCTCACCCAGAAGGAAA............................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................................AGCCTGGCGTTGGTTGTCC................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
......TAAAAATTGAAGTGAA.................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 1 0
...........................................GTTGAAGGTGCGGTGAAAC............................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TCTTTTAGTTTTAACTTCACTTTGGTTCACGCTTTTGCTTCCTCGATTTCCACGCCAGTTTGCTATTCGTCTGAGGTTTACTTTTGGCGCGCTCACACGTCGGTTTTATCCGGGGGTAAACACAACGAGGGGGGCTTCCTTTTTCTCGGTATTTTTAGCTAAGAAGTTTCTTCAGCGTGTGATGCAAGCTCTGAAAAAACGCGCCCGCCACCTCGGACCGCAACGAAAAGCGGTTGAAAAGCACCTCGAG
********************************************************......((..................((((..........................))))..))********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................................................AGCGTGTGATGCAAGCTCTGA........................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................CGCGCTCACACGTCGGTTTTA.............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................CGGTATTTTTAGCTAAGAAG.................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GAAAAGCGGTTGAAAAGCAC...... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................CGTCTGTTTTATCCGCGAGT..................................................................................................................................... 20 3 4 0.50 2 0 0 0 2 0 0 0 0 0
...................................................................................................................................GGGCTTCCCTTCTCTGGGTA................................................................................................... 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0
........................................................AGTTTGCTATTCCTCT.................................................................................................................................................................................. 16 1 2 0.50 1 0 0 0 0 1 0 0 0 0
..........................................TCGCGTTCCACGCAAGTTT............................................................................................................................................................................................. 19 3 20 0.15 3 0 1 0 0 0 0 2 0 0
.........................................CTCGCGTTCCACGCAAGTTT............................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0
...................................................................................................................................GGGCTTCCTTTATCT........................................................................................................ 15 1 9 0.11 1 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................ATGTAAGGTCTGAATAAACG................................................. 20 3 11 0.09 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................TGAGGAGGGCTTCCTTT............................................................................................................ 17 2 14 0.07 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................GGTCTGCAACGAAAAGC................... 17 2 15 0.07 1 0 0 0 0 0 0 1 0 0
................................................................................................ACGTCGTTTTTATCC........................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0
.........................................CTCGCGTTCCACGCAAGTT.............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12084205-12084454 - dsi_6998 AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CAGACTCCAA------ATG------------------AAAACCG-CG--CGAGT-----GTGCAGC---C---AAAA-----TAG-GCCC-CC--ATT-TGTG---TTGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTACGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTC
droSec2 scaffold_1:8909866-8910115 - AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACAAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CATACTCCAA------ATG------------------AAAACCG-CG--CGAGT-----GTGCAGC---C---AAAA-----TAG-GCCC-CC--ATT-AGAG---TTGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTACGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTC
dm3 chr2R:11419427-11419676 - AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CATATCCCAA------ATG------------------AAAACAA-TG--CGAGT-----GTGCAGC---C---AAAA-----GAG-GCCC-CC--ATT-TGTG---TTGCTCCCCT------CGAAAG----AAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTC
droEre2 scaffold_4845:14449300-14449548 + AGAAAAGCA----------AAAT-----TAAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGG---TAAACGCAAAG----CATAACACAA------ATA------------------AAAACCT-CG--CGAGT-----GCGCAGC---C---AAAA-----AAG-GCCC-CC--ATT-GGTG---TTGCTCCCCT------CGAAGG-----AAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGCTT----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GTGTTACTTTT----------CGCCAA--------CTTTT-CGTGAGG--ATC
droYak3 2R:17573972-17574220 + AGAAAAGCA----------AAAT-----TAAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGTT---CAAACGCCAAG----CATAACACAA------ATA------------------AAAAC-A-CG--CGAGT-----GCGCTGG---C---AAAA-----AAG-GCCC-CC--ATT-TGTG---TGGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTT----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GTGTTACTTTT----------CGCCAA--------CTTTT-CGTAGAG--CTC
droEug1 scf7180000409672:295230-295487 - AGAAAAGCA----------AAAT-----TGAAGTGA--TACTA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCTT----TGAACGAAATA----TATAAT--AAAC----AA-------------------GAAATCT-CC--CGGTT-----GTGCAAC---C---AAAAAAAGTTAA-GC-C-CC--AAT-TGTG---AAGCTCCAC-------CGAAAGCAAAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTC----GAGACTTT------TTTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTACTTTT----------CGCCAA--------CTTTT-TGGGGAGTCCTC
droBia1 scf7180000302292:4263318-4263577 + AGAAAAGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCGG----CAATCGAGATA----G----CTCGAATAGT-ATA------------------AAATCCC-CC--CGGGG-----GTGC------A-AGAAAG-----CGA-ACCC-CC--AAG-AGTG---AAGCTCCCCCC----GCGAAAG--AAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCCTTC----GAGACTC--------TTTGCGCGGGCG---GCGGAGC--CTG------------GCGTTACTTTT----------CGCAAGTCCAGATACTTTT-CGAAAGG--TCT
droTak1 scf7180000414536:50268-50527 + AGAAAAGCA----------AAAT-----TGAAGTGA--AACAA---AGTGCAA-AA-ACGACGG--AGCAA-AAGGTGCGAT----AAGCTAAAAA----CC----GTAAATAAT-TTA------------------GAAACC--AA--CGGGC--GTAGTGC------C-AGGAAG-----TAA-GCCC-CC--GTT-GGTGGAGCTGCCCCCCG------CGGAAG--AAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCC---------------------------TTC----GAGACTTCTGTTTTTTTTGCGCGGGCG---GTGGAGC--CTGGTTT---------TTTTACCTTT----------CGCCAA--------CTTTTTTCTGGAG--ATC
droEle1 scf7180000491214:4299422-4299674 - AGAAAAGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCTA----AAAACGAAACA----CAAAA-ATAAATA---ATA------------------GAAACC--CT--CGAGT-----GTGC------T-AGAAAA-----TAG-GCCC-CC--AGCAAGTCA--AGGCTCCCC-------CGAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCT----------------------CTGCGTGC----GAGACTTT------TTTCGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------TGCCAGTTTTG------CT-TGGGGAG-CCTC
droRho1 scf7180000776849:386139-386395 + AGAAAGGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCCA----CAAACGAAATA----CTAAAC--AAATA---ATA------------------AAAACC--AT--CGAGT-----GTGC------T-AGAAAA-----TAA-ACCCCCC--AGCAAGTCA--AGGCTCCCCA------CAAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTGT----GAGACTTT------TTTCGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTC----------TGCCAATTAAG------TT-TGGGGAGGCCTC
droFic1 scf7180000453342:512523-512768 + AGAAAAGCG----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-TCGACGG--ATCAA-AAGGTGTTT----TAAACGAAATA----CAAAAC-AAAACA--AACA------------------GAAATAT-----CAA-------GTGC------A-AAAAAA-----TAG-GCCC-CT--TTC-GGTT---GAGCTCCTC-------CTAATG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTGC----AAGACTTT-------TCCGCGCGGGCG---GTGGAGC--CTG------------GCGTTACTTTT----------TGCAAATTTAG----------ACGGAA--ATG
droKik1 scf7180000302476:461935-462200 - AAAGACCTA----------AAAT-----TTAGTTGATAAAAAA---AGTTTAAGCT-ACGACGG--AGCAAAAAGGTGTGTGAGTTAAAGAATAAA----A-------AA------AT-------------------GCAACTA-TA--GAAGT-----GTATGGC---T---AACG-----GTAACCCTCGCGAAA-AAGTG---AAGCTCCCCG------CGAAGA---AAAGGGGAGCCATAAAAATCGATTCTTCAAG-AGAAGTCGCA------------------C--ACTGCGTAT----GAGACTTT---TTTTTTCGCGCGGGCG---GCGGAGC--CTG------------GCGTTTTCTTCGTCT-----TTGCCAATTCAG------TT-TGGGGG--CCTC
droAna3 scaffold_13266:7840623-7840863 - AGAAAATCG----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CT-ACGTCGG--ATTAA-AAGGTGCCTTATTTAGATGATTAA-----------GAA------AAG------------------ACAGCCC-AC--CGATTGCGTGGCGC------CCAG--A--------------------A-AAGTG---CTGCTCCCC-------CGAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------CGGACTGCGAGCGAGCGAGGCTTT-------TTCGCGCGGGCG---GCGGAGC--CT----------------TTGCTTTT---------TAGCCAATTTAG---------TCAGGG--CCTC
droBip1 scf7180000396759:984871-985104 + AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-TT-ACGTCGG--AGTAA-AAGGTGCTT------AATTTTATA----CATACA-AAA------AAG------------------ACAGCCC-AG--CTATGGCGTGGCGC------TCAG--A--------------------A-AAGTG---CTGCTCCCT-------TGAA-----AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------CGGACTGCGAGC----GAGGCTTT-------TTCGCGCGGGCG---GCGGAGC--CT----------------TTGCTTTT----------AGCCAATTTAG---------TCAGGG--CCTC
dp5 3:12078228-12078494 - AGAAAAACA----------AAAT-----TAAAGTGA--AATTA---AACGCAA-CT-ACGTCGG--A-TAA-CAGGTGCGGTAGCTAGTTGAACAATAGTCG------AA------G-----------CGAACACAAGAAACGG-----C------GCAGTGC------T-AA--A--------------------G-AAGTC---TAGCT----------TC--GGG---AAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCACAG----CACAGTCA---TAC--GCTGCGGGC----AAGAATT--------TTCGCGCGGGCG---GTGTACC--CTGGATTGGTACCTGGCGTTACTTTTGCCTACAGCTCGCCAATTTAA---------AAGGGG--CCTC
droPer2 scaffold_44:266722-266988 - AGAAAAACA----------AAAT-----TAAAGTGA--AATTA---AACGCAA-CA-ACGTCGG--A-TAA-CAGGTGCGGTAGCTAGTTGAACAATAGTCG------AA------G-----------CGAACACAAGAAACGG-----C------GAAGTGC------T-AA--A--------------------G-AAGTC---TAGCT----------TC--GGG---AAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCACAG----CACAGTCA---TAC--GCTGCGGGC----AAGAATT--------TTCGCGCGGGCG---GTGTACC--CTGGATTGGTACCTGGCGTTACTTTTGCCTACAGCTCGCCAATTTAA---------AAGGGG--CCTC
droWil2 scf2_1100000004954:2969581-2969821 + AATAAATAGATAAATAGCTAAAT-----ACAATAAA--AAACAAGAAAATTAAGCCAACAAATG--AAGAA-AATACGCGTTAATTAATTAAACTA------TAAT--AA------AAA------------------AAAACCACACAGCTATTGCACTGCGTAGTCACT---AAA------------------------ATA---AAATACCCCCAGGCTGCAAAAA---AGAGAAGAGTCATAAAAATCGATTCTTCAA--AGAAGTCAAA------------------A--A---------------------------------CGGGCGTCGTTGGAGC--TCTGCTA---------TTTTTTTTTT----------CGCTT--------------------AA--TTT
droVir3 scaffold_12875:20433225-20433457 - AAATAGTTT----------AAAT-----TAATGTCA--AACGA---CGCGCAA----ACGGAAAT-ATAAA-ACGGTGTAATTTGTAAATAA-------------------------TAACAGCTATACGAGAACAT-ATCC-----------T-----GCACAGC-----AT--A--------------------A-AATCG---CAGCT----------TC--AG----GAAAAAGAGCCATAAAAATCGATTCTCCAA--CGAAGTCACAG---------TCA---TACAGGCCAAAAGG----GAGACTT--------TTCGCGCGGGCGTCGGTGGAGCGCCCA-----GTGCTTGAT-TTTTTTTT----------TGCCTG--------CT----------------
droMoj3 scaffold_6496:5705988-5706211 + AGAAAATAA----------TAATAATAATAATATGT--AACGA---CGCGCAA----ACGACAATGATAAA-ACGGTGCAATTGCTAAACGAAATA----GAGTCT-AAA------A-----------CGAGAACAA-ATAC-----------T-----GCGCAGC-----AT--A--------------------A-AAATC---CAGCT----------TC--AGG-----AAAAGAGTCATAAAAATCGATTCTCCAACAAAAAGTCACAGTCCACACAGTCAAGAAACG-GCCAAGAGG----GAGACTT--------TTCGCGCGGGCGTCGGTGGAGC----------------------------------------------------------------------
droGri2 scaffold_15245:11116387-11116612 + AAATAAT------------AAAG-----TGATGTAA--AACTA---CACGCAA----ACGATAA--C-GAA-AAGGTGCAATTGCTTAATAATACA----CAGC---CAA------A-----------CGAATACGA-AAAC-----------T-----GCGCAGC-----AT--A--------------------A-AATTC---CAGCT----------TC--AGG---AAAAAAGAGCCATAAAAATCGATTCTCCAA--CGAAGTCACAG---------TCA---TACGGACCAAGAGA----GAGACACT------TTTCGCGCGGGCGTCGGAGGAGCGCCCA------------GTGCTGCTT-----------------A--------CATTT-CAT---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CAGACTCCAA------ATG------------------AAAACCG-CG--CGAGT-----GTGCAGC---C---AAAA-----TAG-GCCC-CC--ATT-TGTG---TTGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTACGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................CCC------CGAAG----GAAAAAGAGCCATAA........................................................................................................................................................................2311.00100000100000000000
............................TGAAGTGA--AACCA---AGTGCGA-AA-ACGA.................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................CA------------------C--ACTACGTTC----GAGACTTT-------TTTGCGC.....................................................................................2711.00110000000000000000
...............................................................................................................................................................................................................................................................................CA------------------C--ACTACGTTC----GAGACT.....................................................................................................1811.00110000000000000000
........................................................................................................................................................................................................GTG---TTGCTCCCCC------CGAAG----GAA....................................................................................................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................ATCGATTCTTCAA--AGAAGT.................................................................................................................................................1911.00100010000000000000
................................GTGA--AACCA---AGTGCGA-AA-ACGAAGG--AG..........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
........................................................................................................................................................................................................GTG---TTGCTCCCCC------CGAAG----G......................................................................................................................................................................................1911.00100001000000000000
droSec2
AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACAAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CATACTCCAA------ATG------------------AAAACCG-CG--CGAGT-----GTGCAGC---C---AAAA-----TAG-GCCC-CC--ATT-AGAG---TTGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTACGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................AA-ACAAAGG--AGCTA-AAGGTGC...............................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................C----GAGACTTT-------TTTGCGCGGGCG---.............................................................................2111.0011000
...................................................................................................................................................................................................ATT-AGAG---TTGCTCCCCC------CGAA............................................................................................................................................................................................2111.0010100
............................................................AAGG--AGCTA-AAGGTGCGGT---CAAAC....................................................................................................................................................................................................................................................................................................................................2411.0010010
....................................................................................................CATACTCCAA------ATG------------------AAAACCG-CG--CGAGT-----...............................................................................................................................................................................................................................................................2711.0010100
............................................................................................................AA------ATG------------------AAAACCG-CG--CGAGT-----...............................................................................................................................................................................................................................................................1911.0010010
dm3
AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGT---CAAACGATAAG----CATATCCCAA------ATG------------------AAAACAA-TG--CGAGT-----GTGCAGC---C---AAAA-----GAG-GCCC-CC--ATT-TGTG---TTGCTCCCCT------CGAAAG----AAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTC----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------CGCCAA--------CTTTT-CGTGGAG--CTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................AGTGA--AACCA---AGTGCGA-AA-A....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..............................................AGTGCGA-AA-ACGAAGG--AG..........................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000
.................................................................................................................................................................GCAGC---C---AAAA-----GAG-GCCC-CC--ATT-.......................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................G------------GCGTTGCTTTT----------CGCCAA--------C.................1912.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAAGTGA--AACCA---AGTGCGA-........................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACCA---AGTGCGA-AA-ACGAA................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................TGA--AACCA---AGTGCGA-AA-AC...................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................CGCCAA--------CTTTT-CGTGGAG--...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................ACGAAGG--AGCTA-AAGGTG................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................CGAAGG--AGCTA-AAGGTGC...............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................GAAGTGA--AACCA---AGTGCGA-A.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGA--AACCA---AGTGCGA-AA-A....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTT-------TTTGCGCGGGCG---GTGGA........................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGG--AGCTA-AAGGTGCGGT---.........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................AAAA-----GAG-GCCC-CC--ATT-TGTG---T...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AAGGTGCGGT---CAAACGATAAG----CAT.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................T-----TGAAGTGA--AACCA---AGTGCG..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAT-----TGAAGTGA--AACCA---AGTG............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CCA---AGTGCGA-AA-ACGAAGG--AG..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCAA--AGAAGTCGCA------------------C--ACTGCGTTC----GA.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAT-----TGAAGTGA--AACCA---AGTGCG..........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......TCA----------AAAT-----TGAAGTGA--AACCA---AGTGCG..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GA-AA-ACGAAGG--AGCTA-AAGGTGCG..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CG---GTGGAGC--CTG------------GCGTTGC..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAATCA----------AAAT-----TGAAGTGA--A.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A---AGTGCGA-AA-ACGAAGG--AGC.........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CCAA--------CTTTT-CGTGGAG--CT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AACCA---AGTGCGA-AA-ACGAA................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTGCGA-AA-ACGAAGG--AGCTA-AAGG..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................G------------GCGTTGCTTTT----------CGCCAA--------CTT...............2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGA--AACCA---AGTGCGA-AA-ACGAA................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGCGGGCG---GTGGAGC--CTG------------GCGTTG...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................G------------GCGTTGCTTTT----------CGCCAA--------CTTT..............2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................T-----TGAAGTGA--AACCA---AGTGCGA-AA-ACG..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................ACCA---AGTGCGA-AA-ACGAAGG--AG..........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTGCGA-AA-ACGAAGG--AGCT........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................AGTGCGA-AA-ACGAAGG--AGCT........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AA--AGAAGTCGCA------------------C--ACTGCGT.................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCGA-AA-ACGAAGG--AGCTA-AAGGTG................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GA--AACCA---AGTGCGA-AA-AC...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGCGA-AA-ACGAAGG--AGCTA-A.....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCGCGGGCG---GTGGAGC--CTG------------GCG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................CTGCGTTC----GAGACTTT-------TTTGC.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................CGAAGG--AGCTA-AAGGTGCG..............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................CGCGGGCG---GTGGAGC--CTG------------GCGTTGC..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................GG--AGCTA-AAGGTGCGGT---CAA......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................A-ACGAAGG--AGCTA-AAGGT.................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................T-------TTTGCGCGGGCG---GTGGAGC--CTG------------GC...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................GCGA-AA-ACGAAGG--AGCTA-AAGGTGC...............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................ACAA-TG--CGAGT-----GTGCAGC---C---AAAA-----GAG-....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................GCGA-AA-ACGAAGG--AGCTA-AAGGTGCG..............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droEre2
AGAAAAGCA----------AAAT-----TAAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGGG---TAAACGCAAAG----CATAACACAA------ATA------------------AAAACCT-CG--CGAGT-----GCGCAGC---C---AAAA-----AAG-GCCC-CC--ATT-GGTG---TTGCTCCCCT------CGAAGG-----AAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGCTT----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GTGTTACTTTT----------CGCCAA--------CTTTT-CGTGAGG--ATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................GCGA-AA-ACGAAGG--AGCTA-AAGGT.................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................................AACCA---AGTGCGA-AA-ACGAAGG--............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCCAA--------CTTTT-CGTGAGG--A..1811.0010000010
.....................AT-----TAAAGTGA--AACCA---AGTG............................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.....AGCA----------AAAT-----TAAAGTGA--AACCA---AGTG............................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
droYak3
AGAAAAGCA----------AAAT-----TAAAGTGA--AACCA---AGTGCGA-AA-ACGAAGG--AGCTA-AAGGTGCGTT---CAAACGCCAAG----CATAACACAA------ATA------------------AAAAC-A-CG--CGAGT-----GCGCTGG---C---AAAA-----AAG-GCCC-CC--ATT-TGTG---TGGCTCCCCC------CGAAG----GAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTT----GAGACTTT-------TTTGCGCGGGCG---GTGGAGC--CTG------------GTGTTACTTTT----------CGCCAA--------CTTTT-CGTAGAG--CTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................GA--AACCA---AGTGCGA-AA-ACGAAGG--AGCT........................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..................................GA--AACCA---AGTGCGA-AA-ACGAAGG--AGC.........................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................AGTGCGA-AA-ACGAAGG--AGC.........................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................................CGA-AA-ACGAAGG--AGCTA-AAGG..................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
................................GTGA--AACCA---AGTGCGA-AA-ACGAAGG--AG..........................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................................................................................CC--ATT-TGTG---TGGCTCCCCC------C...............................................................................................................................................................................................2011.00100100000000
......................................AACCA---AGTGCGA-AA-ACGAAGG--AGC.........................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..................................GA--AACCA---AGTGCGA-AA-ACGAAG...............................................................................................................................................................................................................................................................................................................................................................2211.00100000100000
..............................................AGTGCGA-AA-ACGAAGG--AGCC........................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...............................................................................................................................................................................................................................................................CTTCAA--AGAAGTCGCA------------------C--ACT.....................................................................................................................2011.00100000010000
...................................A--AACCA---AGTGCGA-AA-ACGAA................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................AT-----TAAAGTGA--AACCA---AGTGCGA-........................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................A-AA-ACGAAGG--AGCTA-AAGA..................................................................................................................................................................................................................................................................................................................................................1930.33100000010000
droEug1
AGAAAAGCA----------AAAT-----TGAAGTGA--TACTA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCTT----TGAACGAAATA----TATAAT--AAAC----AA-------------------GAAATCT-CC--CGGTT-----GTGCAAC---C---AAAAAAAGTTAA-GC-C-CC--AAT-TGTG---AAGCTCCAC-------CGAAAGCAAAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTTC----GAGACTTT------TTTTGCGCGGGCG---GTGGAGC--CTG------------GCGTTACTTTT----------CGCCAA--------CTTTT-TGGGGAGTCCTCSizeHit CountTotal NormTotal
No Reads
droBia1
AGAAAAGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCGG----CAATCGAGATA----G----CTCGAATAGT-ATA------------------AAATCCC-CC--CGGGG-----GTGC------A-AGAAAG-----CGA-ACCC-CC--AAG-AGTG---AAGCTCCCCCC----GCGAAAG--AAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCCTTC----GAGACTC--------TTTGCGCGGGCG---GCGGAGC--CTG------------GCGTTACTTTT----------CGCAAGTCCAGATACTTTT-CGAAAGG--TCTSizeHit CountTotal NormTotal
No Reads
droTak1
AGAAAAGCA----------AAAT-----TGAAGTGA--AACAA---AGTGCAA-AA-ACGACGG--AGCAA-AAGGTGCGAT----AAGCTAAAAA----CC----GTAAATAAT-TTA------------------GAAACC--AA--CGGGC--GTAGTGC------C-AGGAAG-----TAA-GCCC-CC--GTT-GGTGGAGCTGCCCCCCG------CGGAAG--AAAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCC---------------------------TTC----GAGACTTCTGTTTTTTTTGCGCGGGCG---GTGGAGC--CTGGTTT---------TTTTACCTTT----------CGCCAA--------CTTTTTTCTGGAG--ATCSizeHit CountTotal NormTotal
No Reads
droEle1
AGAAAAGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCTA----AAAACGAAACA----CAAAA-ATAAATA---ATA------------------GAAACC--CT--CGAGT-----GTGC------T-AGAAAA-----TAG-GCCC-CC--AGCAAGTCA--AGGCTCCCC-------CGAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCT----------------------CTGCGTGC----GAGACTTT------TTTCGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTT----------TGCCAGTTTTG------CT-TGGGGAG-CCTCSizeHit CountTotal NormTotal
No Reads
droRho1
AGAAAGGCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-ACGACGG--AGCAA-AAGGTGCCA----CAAACGAAATA----CTAAAC--AAATA---ATA------------------AAAACC--AT--CGAGT-----GTGC------T-AGAAAA-----TAA-ACCCCCC--AGCAAGTCA--AGGCTCCCCA------CAAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTGT----GAGACTTT------TTTCGCGCGGGCG---GTGGAGC--CTG------------GCGTTGCTTTC----------TGCCAATTAAG------TT-TGGGGAGGCCTCSizeHit CountTotal NormTotal
No Reads
droFic1
AGAAAAGCG----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CA-TCGACGG--ATCAA-AAGGTGTTT----TAAACGAAATA----CAAAAC-AAAACA--AACA------------------GAAATAT-----CAA-------GTGC------A-AAAAAA-----TAG-GCCC-CT--TTC-GGTT---GAGCTCCTC-------CTAATG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------C--ACTGCGTGC----AAGACTTT-------TCCGCGCGGGCG---GTGGAGC--CTG------------GCGTTACTTTT----------TGCAAATTTAG----------ACGGAA--ATGSizeHit CountTotal NormTotal
No Reads
droKik1
AAAGACCTA----------AAAT-----TTAGTTGATAAAAAA---AGTTTAAGCT-ACGACGG--AGCAAAAAGGTGTGTGAGTTAAAGAATAAA----A-------AA------AT-------------------GCAACTA-TA--GAAGT-----GTATGGC---T---AACG-----GTAACCCTCGCGAAA-AAGTG---AAGCTCCCCG------CGAAGA---AAAGGGGAGCCATAAAAATCGATTCTTCAAG-AGAAGTCGCA------------------C--ACTGCGTAT----GAGACTTT---TTTTTTCGCGCGGGCG---GCGGAGC--CTG------------GCGTTTTCTTCGTCT-----TTGCCAATTCAG------TT-TGGGGG--CCTCSizeHit CountTotal NormTotal
No Reads
droAna3
AGAAAATCG----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-CT-ACGTCGG--ATTAA-AAGGTGCCTTATTTAGATGATTAA-----------GAA------AAG------------------ACAGCCC-AC--CGATTGCGTGGCGC------CCAG--A--------------------A-AAGTG---CTGCTCCCC-------CGAAAG---AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------CGGACTGCGAGCGAGCGAGGCTTT-------TTCGCGCGGGCG---GCGGAGC--CT----------------TTGCTTTT---------TAGCCAATTTAG---------TCAGGG--CCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................GCAA-CT-ACGTCGG--ATTAA-AAG...................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................ATAAAAATCGATTCTTCAA--AGAAGTC................................................................................................................................................2611.001010000
............................TGAAGTGA--AACCA---AGTGCA..........................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..................................GA--AACCA---AGTGCAA-CT-ACGTCGG--ATT.........................................................................................................................................................................................................................................................................................................................................................2611.001000010
droBip1
AGAAAATCA----------AAAT-----TGAAGTGA--AACCA---AGTGCAA-TT-ACGTCGG--AGTAA-AAGGTGCTT------AATTTTATA----CATACA-AAA------AAG------------------ACAGCCC-AG--CTATGGCGTGGCGC------TCAG--A--------------------A-AAGTG---CTGCTCCCT-------TGAA-----AAAAGAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCGCA------------------CGGACTGCGAGC----GAGGCTTT-------TTCGCGCGGGCG---GCGGAGC--CT----------------TTGCTTTT----------AGCCAATTTAG---------TCAGGG--CCTCSizeHit CountTotal NormTotal
No Reads
dp5
AGAAAAACA----------AAAT-----TAAAGTGA--AATTA---AACGCAA-CT-ACGTCGG--A-TAA-CAGGTGCGGTAGCTAGTTGAACAATAGTCG------AA------G-----------CGAACACAAGAAACGG-----C------GCAGTGC------T-AA--A--------------------G-AAGTC---TAGCT----------TC--GGG---AAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCACAG----CACAGTCA---TAC--GCTGCGGGC----AAGAATT--------TTCGCGCGGGCG---GTGTACC--CTGGATTGGTACCTGGCGTTACTTTTGCCTACAGCTCGCCAATTTAA---------AAGGGG--CCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................TGTACC--CTGGATTGGTACCTGGCGTTAAA.............................................2912.0020000000020
.................................................................................................................................................................................................................................................................................................TAC--GCTGCGGGC----AAGAATT--------TTCGC.......................................................................................2412.0020100000010
...........................................................................................................................................................................................................................................................................................................................................................................GTTACTTTTGCCTACAGCT................................1911.0010100000000
droPer2
AGAAAAACA----------AAAT-----TAAAGTGA--AATTA---AACGCAA-CA-ACGTCGG--A-TAA-CAGGTGCGGTAGCTAGTTGAACAATAGTCG------AA------G-----------CGAACACAAGAAACGG-----C------GAAGTGC------T-AA--A--------------------G-AAGTC---TAGCT----------TC--GGG---AAAAAAGAGCCATAAAAATCGATTCTTCAA--AGAAGTCACAG----CACAGTCA---TAC--GCTGCGGGC----AAGAATT--------TTCGCGCGGGCG---GTGTACC--CTGGATTGGTACCTGGCGTTACTTTTGCCTACAGCTCGCCAATTTAA---------AAGGGG--CCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................AA-CAGGTGCGGTAGCTAGTTG...................................................................................................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................TAC--GCTGCGGGC----AAGAATT--------TTCG........................................................................................2311.001010000
droWil2
AATAAATAGATAAATAGCTAAAT-----ACAATAAA--AAACAAGAAAATTAAGCCAACAAATG--AAGAA-AATACGCGTTAATTAATTAAACTA------TAAT--AA------AAA------------------AAAACCACACAGCTATTGCACTGCGTAGTCACT---AAA------------------------ATA---AAATACCCCCAGGCTGCAAAAA---AGAGAAGAGTCATAAAAATCGATTCTTCAA--AGAAGTCAAA------------------A--A---------------------------------CGGGCGTCGTTGGAGC--TCTGCTA---------TTTTTTTTTT----------CGCTT--------------------AA--TTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................A-AATACGCGTTAATTAATTAAA.................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................................................................................................................................................................................................................A---AGAGAAGAGTCATAAAAATCGATT...............................................................................................................................................................2511.00100100
...............................................................................................................................................................................................................................................................................AA------------------A--A---------------------------------CGGGCGTCGTTGGAGC--T...................................................................2111.00100100
.........................................................................................................................................................................................................................GGCTGCAAAAA---AGAGAAGA...............................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................ACCCCCAGGCTGCAAAAA---AGAG...................................................................................................................................................................................2211.00100010
....................................................AGCCAACAAATG--AAGAA-AAT...................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................GTCATAAAAATCGATTCTT............................................................................................................................................................1911.00101000
.................................................................................................................................................................................................................................................................TCAA--AGAAGTCAAA------------------A--A---------------------------------CGGGC.................................................................................2111.00110000
...................................................................................................................................................................................................................CCCCCAGGCTGCAAAAA---AGAGAAGA...............................................................................................................................................................................2511.00101000
..................................................................................................................................................................................................................................................................CAA--AGAAGTCAAA------------------A--A---------------------------------CGGGCGTCGT............................................................................2511.00101000
......................................................................................................................................................................................................................................................AAATCGATTCTTCAA--AGAAG..................................................................................................................................................2011.00100010
..................................................................................................................................................................................................................................AA---AGAGAAGAGTCATAAAAATCGATT...............................................................................................................................................................2611.00100001
droVir3
AAATAGTTT----------AAAT-----TAATGTCA--AACGA---CGCGCAA----ACGGAAAT-ATAAA-ACGGTGTAATTTGTAAATAA-------------------------TAACAGCTATACGAGAACAT-ATCC-----------T-----GCACAGC-----AT--A--------------------A-AATCG---CAGCT----------TC--AG----GAAAAAGAGCCATAAAAATCGATTCTCCAA--CGAAGTCACAG---------TCA---TACAGGCCAAAAGG----GAGACTT--------TTCGCGCGGGCGTCGGTGGAGCGCCCA-----GTGCTTGAT-TTTTTTTT----------TGCCTG--------CT----------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................AGGCCAAAAGG----GAGACTT--------............................................................................................1812.002000000002000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AGC-----AT--A--------------------A-AATCG---CAGCT----------TC--AG----GA.....................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CA---TACAGGCCAAAAGG----GAGA.......................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..ATAGTTT----------AAAT-----TAATGTCA--........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
............................................................GAAAT-ATAAA-ACGGTGTA..............................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................G---CAGCT----------TC--AG----GAAAAAGA...............................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................A-AATCG---CAGCT----------TC--AG----GAAAAAGAGC.............................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..................................................................ATAAA-ACGGTGTAATTTGT........................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGTCACAG---------TCA---TACAGGCCAAA..................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AGAAAATAA----------TAATAATAATAATATGT--AACGA---CGCGCAA----ACGACAATGATAAA-ACGGTGCAATTGCTAAACGAAATA----GAGTCT-AAA------A-----------CGAGAACAA-ATAC-----------T-----GCGCAGC-----AT--A--------------------A-AAATC---CAGCT----------TC--AGG-----AAAAGAGTCATAAAAATCGATTCTCCAACAAAAAGTCACAGTCCACACAGTCAAGAAACG-GCCAAGAGG----GAGACTT--------TTCGCGCGGGCGTCGGTGGAGC----------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................GCCAAGAGG----GAGACTT--------TTCGCG......................................................................................2211.001100000
.........................................................ACGACAATGATAAA-ACGGTGCAAT............................................................................................................................................................................................................................................................................................................................................2411.001000010
........................ATAATAATATGT--AACGA---CGCGC...........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................CAAGAAACG-GCCAAGAGG----GAGACTT--------............................................................................................2511.001000001
...........................................................................................................................................................................AT--A--------------------A-AAATC---CAGCT----------TC--AGG-----AAAAGA...............................................................................................................................................................................2511.001000001
.....................................................................................................................................ACAA-ATAC-----------T-----GCGCAGC-----AT--A--------------------A-AAATC---CA..............................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................TAAAAATCGATTCTCCAACAAAAA...................................................................................................................................................2411.001100000
droGri2
AAATAAT------------AAAG-----TGATGTAA--AACTA---CACGCAA----ACGATAA--C-GAA-AAGGTGCAATTGCTTAATAATACA----CAGC---CAA------A-----------CGAATACGA-AAAC-----------T-----GCGCAGC-----AT--A--------------------A-AATTC---CAGCT----------TC--AGG---AAAAAAGAGCCATAAAAATCGATTCTCCAA--CGAAGTCACAG---------TCA---TACGGACCAAGAGA----GAGACACT------TTTCGCGCGGGCGTCGGAGGAGCGCCCA------------GTGCTGCTT-----------------A--------CATTT-CAT---------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:03 AM